Bilateria DUPLICATION Bilateria ANCESTRAL SPECIES ENSGT00530000063174.a #22 Chordata ANCESTRAL SPECIES ENSGT00530000063174.a #22 Vertebrata ANCESTRAL SPECIES ENSGT00530000063174.a #22 Gnathostomata ANCESTRAL SPECIES 639 ENSGT01100000263512.b.b.b ENSGT00940000156341 #20 ENSGT01030000234935 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 Euteleostomi ANCESTRAL SPECIES 20 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 ENSGT00940000160788 ENSGT00940000163347 ENSGT00940000162539 ENSGT00940000163390 ENSGT00940000165126 ENSGT00940000158723 ENSGT01070000253816.a.b ENSGT01100000263502.A.a.a.a.a ENSGT00530000063353.b ENSGT00390000009902 ENSGT01100000263512.b.b.b ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT01030000234935 ENSGT00950000182941.b.a ##26 ENSGT00940000154833 ENSGT00940000153460.c.b ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00590000083134.b ENSGT00390000015476 ENSGT00940000155028 ENSGT00950000182865.b.a.b.b.b.b ENSGT00390000004360.a.b.a.a.a ENSGT00390000013938 ENSGT01050000244955.a.b ENSGT01050000244897.a.b.a Sarcopterygii ANCESTRAL SPECIES 117 ENSGT00910000144179.b.a ENSGT01100000263512.b.b.a ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT01030000235848 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Tetrapoda ANCESTRAL SPECIES ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Amniota ANCESTRAL SPECIES ENSGT00530000064238 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Mammalia ANCESTRAL SPECIES ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Theria ANCESTRAL SPECIES 1 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES 26 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Laurasiatheria ANCESTRAL SPECIES 16 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Carnivora ANCESTRAL SPECIES 11 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT01000000221142 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Caniformia ANCESTRAL SPECIES 26 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT01000000221142 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.r.b #33 ENSGT00940000167584.b ENSGT00870000136506.s ##33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 Canidae ANCESTRAL SPECIES 26 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT01000000221142 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT01090000260070.A #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.r.b #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Canis_lupus ANCESTRAL SPECIES 26 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT01000000221142 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT01090000260070.A #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.r.b #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Dog MODERN SPECIES 144 REPS2 (ENSCAFG00845030873) #7 ENSCAFG00845030938 #8 NHS (ENSCAFG00845030967) #9 SCML1 (ENSCAFG00845030994) #10 RAI2 (ENSCAFG00845030999) #11 ENSCAFG00845024469 #12 SCML2 (ENSCAFG00845024846) #13 ENSCAFG00845025153 #14 CDKL5 (ENSCAFG00845025238) #15 ENSCAFG00845025606 #16 RS1 (ENSCAFG00845025646) #17 PPEF1 (ENSCAFG00845025770) #18 PHKA2 (ENSCAFG00845026195) #19 ADGRG2 (ENSCAFG00845027443) #20 ENSCAFG00845028004 #21 PDHA1 (ENSCAFG00845028035) #22 MAP3K15 (ENSCAFG00845028166) #23 SH3KBP1 (ENSCAFG00845028384) #24 BCLAF3 (ENSCAFG00845028801) #25 MAP7D2 (ENSCAFG00845028966) #26 EIF1AX (ENSCAFG00845029014) #27 RPS6KA3 (ENSCAFG00845029219) #28 CNKSR2 (ENSCAFG00845029599) #29 KLHL34 (ENSCAFG00845029813) #30 SMPX (ENSCAFG00845029832) #31 MBTPS2 (ENSCAFG00845029854) #32 ENSCAFG00845029922 #33 PHEX (ENSCAFG00845029993) #34 ENSCAFG00845030087 #35 PTCHD1 (ENSCAFG00845030096) #36 PRDX4 (ENSCAFG00845030129) #37 Dingo MODERN SPECIES 217 SYAP1 (ENSCAFG00020003729) TXLNG (ENSCAFG00020003746) RBBP7 (ENSCAFG00020003765) REPS2 (ENSCAFG00020003791) #7 ENSCAFG00020003924 #8 ENSCAFG00020003937 NHS (ENSCAFG00020003950) #9 RAI2 (ENSCAFG00020004001) #11 SCML2 (ENSCAFG00020004011) #13 CDKL5 (ENSCAFG00020004060) #15 ENSCAFG00020004181 #16 RS1 (ENSCAFG00020004187) #17 PPEF1 (ENSCAFG00020004211) #18 PHKA2 (ENSCAFG00020004228) #19 ADGRG2 (ENSCAFG00020004286) #20 PDHA1 (ENSCAFG00020004526) #22 MAP3K15 (ENSCAFG00020004533) #23 SH3KBP1 (ENSCAFG00020004559) #24 ENSCAFG00020004575 #25 MAP7D2 (ENSCAFG00020004579) #26 EIF1AX (ENSCAFG00020004588) #27 RPS6KA3 (ENSCAFG00020004599) #28 ENSCAFG00020004620 CNKSR2 (ENSCAFG00020004670) #29 SMPX (ENSCAFG00020005104) #31 MBTPS2 (ENSCAFG00020005119) #32 ENSCAFG00020005174 #33 PHEX (ENSCAFG00020005217) #34 ENSCAFG00020005279 ENSCAFG00020005312 #35 PTCHD1 (ENSCAFG00020005326) #36 Red fox MODERN SPECIES 24 RBBP7 (ENSVVUG00000014406) ENSVVUG00000014403 ENSVVUG00000014401 #8 REPS2 (ENSVVUG00000014319) #7 NHS (ENSVVUG00000014292) #9 RAI2 (ENSVVUG00000014289) #11 ENSVVUG00000014283 ENSVVUG00000014260 #12 SCML2 (ENSVVUG00000014250) #13 ENSVVUG00000014245 ##14 ENSVVUG00000014243 #16 CDKL5 (ENSVVUG00000014210) #15 ENSVVUG00000014199 PPEF1 (ENSVVUG00000014157) #18 ADGRG2 (ENSVVUG00000013420) #20 PDHA1 (ENSVVUG00000013392) #22 MAP3K15 (ENSVVUG00000013244) #23 ENSVVUG00000013215 ENSVVUG00000013205 SH3KBP1 (ENSVVUG00000013144) #24 BCLAF3 (ENSVVUG00000013082) #25 MAP7D2 (ENSVVUG00000013035) #26 EIF1AX (ENSVVUG00000013024) #27 RPS6KA3 (ENSVVUG00000013013) #28 ENSVVUG00000012987 ENSVVUG00000012984 CNKSR2 (ENSVVUG00000012970) #29 ENSVVUG00000012959 #30 SMPX (ENSVVUG00000012956) #31 MBTPS2 (ENSVVUG00000012954) #32 ENSVVUG00000012939 #33 Caniformia_b ANCESTRAL SPECIES 24 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.r.b #33 ENSGT00940000167584.b ENSGT00870000136506.s ##33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 Ursidae ANCESTRAL SPECIES 28 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181.f #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.r.b #33 ENSGT00940000167584.b ENSGT00870000136506.s ##33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 Ursus ANCESTRAL SPECIES 47 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181.f #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.r.b #33 ENSGT00870000136506.s ##33 ENSGT00940000157313 #34 ENSGT01070000253775.a.d.a.a.a.a.k ENSGT00950000186265 ENSGT00510000047522 American black bear MODERN SPECIES 1863 PDHA1 (ENSUAMG00000024022) #22 MAP3K15 (ENSUAMG00000024021) #23 Polar bear MODERN SPECIES 199 CTPS2 (ENSUMAG00000008722) S100G (ENSUMAG00000008728) ENSUMAG00000008732 SYAP1 (ENSUMAG00000008735) TXLNG (ENSUMAG00000008747) RBBP7 (ENSUMAG00000008756) REPS2 (ENSUMAG00000008763) #7 NHS (ENSUMAG00000008784) #9 ENSUMAG00000008787 #10 SCML2 (ENSUMAG00000008801) #13 CDKL5 (ENSUMAG00000008854) #15 RS1 (ENSUMAG00000008917) #17 PPEF1 (ENSUMAG00000008931) #18 PHKA2 (ENSUMAG00000009067) #19 ADGRG2 (ENSUMAG00000010103) #20 PDHA1 (ENSUMAG00000010424) #22 MAP3K15 (ENSUMAG00000010492) #23 SH3KBP1 (ENSUMAG00000010682) #24 BCLAF3 (ENSUMAG00000010697) #25 MAP7D2 (ENSUMAG00000010703) #26 ENSUMAG00000010717 #27 RPS6KA3 (ENSUMAG00000010772) #28 CNKSR2 (ENSUMAG00000010845) #29 SMPX (ENSUMAG00000011168) #31 MBTPS2 (ENSUMAG00000011194) #32 ENSUMAG00000011222 SMS (ENSUMAG00000011225) ##33 PHEX (ENSUMAG00000011248) #34 ENSUMAG00000011412 ENSUMAG00000011422 ENSUMAG00000011448 #35 Giant Panda MODERN SPECIES 2288 ENSAMEG00000023806 SYAP1 (ENSAMEG00000010286) TXLNG (ENSAMEG00000010264) RBBP7 (ENSAMEG00000010201) REPS2 (ENSAMEG00000010165) #7 NHS (ENSAMEG00000010138) #9 ENSAMEG00000002958 #10 RAI2 (ENSAMEG00000018565) #11 ENSAMEG00000029358 SCML2 (ENSAMEG00000016850) #13 CDKL5 (ENSAMEG00000016835) #15 RS1 (ENSAMEG00000016826) #17 PPEF1 (ENSAMEG00000016806) #18 PHKA2 (ENSAMEG00000016774) #19 ADGRG2 (ENSAMEG00000016754) #20 PDHA1 (ENSAMEG00000016730) #22 MAP3K15 (ENSAMEG00000016682) #23 SH3KBP1 (ENSAMEG00000016636) #24 BCLAF3 (ENSAMEG00000016629) #25 MAP7D2 (ENSAMEG00000016615) #26 ENSAMEG00000028944 #27 RPS6KA3 (ENSAMEG00000016514) #28 CNKSR2 (ENSAMEG00000016482) #29 KLHL34 (ENSAMEG00000016476) #30 SMPX (ENSAMEG00000016467) #31 ENSAMEG00000016444 SMS (ENSAMEG00000016423) ##33 PHEX (ENSAMEG00000016398) #34 ENSAMEG00000011652 ENSAMEG00000019953 #35 PTCHD1 (ENSAMEG00000014696) #36 Mustelinae ANCESTRAL SPECIES 56 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.s ##33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Ferret MODERN SPECIES 229 TXLNG (ENSMPUG00000002808) RBBP7 (ENSMPUG00000002818) REPS2 (ENSMPUG00000002827) #7 NHS (ENSMPUG00000002834) #9 ENSMPUG00000002840 #10 RAI2 (ENSMPUG00000019017) #11 ENSMPUG00000002856 #12 SCML2 (ENSMPUG00000002862) #13 ENSMPUG00000002872 ENSMPUG00000002898 CDKL5 (ENSMPUG00000002901) #15 RS1 (ENSMPUG00000002912) #17 PPEF1 (ENSMPUG00000002945) #18 PHKA2 (ENSMPUG00000002957) #19 ADGRG2 (ENSMPUG00000003173) #20 PDHA1 (ENSMPUG00000003269) #22 ENSMPUG00000003281 #23 ENSMPUG00000003295 #23 SH3KBP1 (ENSMPUG00000003301) #24 BCLAF3 (ENSMPUG00000003312) #25 MAP7D2 (ENSMPUG00000003325) #26 EIF1AX (ENSMPUG00000003337) #27 RPS6KA3 (ENSMPUG00000003384) #28 ENSMPUG00000003816 American mink DUPLICATION American mink MODERN SPECIES 42 TXLNG (ENSNVIG00000020678) RBBP7 (ENSNVIG00000020723) REPS2 (ENSNVIG00000020761) #7 NHS (ENSNVIG00000020801) #9 ENSNVIG00000020825 ENSNVIG00000020836 #10 ENSNVIG00000020854 SCML2 (ENSNVIG00000020875) #13 CDKL5 (ENSNVIG00000020913) #15 ENSNVIG00000020953 #16 RS1 (ENSNVIG00000000088) #17 PPEF1 (ENSNVIG00000000126) #18 PHKA2 (ENSNVIG00000000195) #19 ADGRG2 (ENSNVIG00000000398) #20 ENSNVIG00000001555 #22 ENSNVIG00000001566 #22 MAP3K15 (ENSNVIG00000001576) #23 SH3KBP1 (ENSNVIG00000001649) #24 BCLAF3 (ENSNVIG00000001781) #25 ENSNVIG00000001808 #26 American mink MODERN SPECIES 42 SYAP1 (ENSNVIG00000020662) TXLNG (ENSNVIG00000020678) RBBP7 (ENSNVIG00000020723) REPS2 (ENSNVIG00000020761) #7 NHS (ENSNVIG00000020801) #9 ENSNVIG00000020825 ENSNVIG00000020836 #10 ENSNVIG00000020854 SCML2 (ENSNVIG00000020875) #13 CDKL5 (ENSNVIG00000020913) #15 ENSNVIG00000020953 #16 RS1 (ENSNVIG00000000088) #17 PPEF1 (ENSNVIG00000000126) #18 PHKA2 (ENSNVIG00000000195) #19 ADGRG2 (ENSNVIG00000000398) #20 ENSNVIG00000001555 #22 ENSNVIG00000001566 #22 MAP3K15 (ENSNVIG00000001576) #23 SH3KBP1 (ENSNVIG00000001649) #24 BCLAF3 (ENSNVIG00000001781) #25 ENSNVIG00000001808 #26 Felidae ANCESTRAL SPECIES 12 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT01000000221142 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT01030000235848 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00990000213085 ENSGT00390000018687 Panthera ANCESTRAL SPECIES 41 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00510000046986.v.b.b.b ENSGT00540000073670 #8 ENSGT01000000221142 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT01090000260070.A #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT01030000235848 Panthera_a ANCESTRAL SPECIES 40 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00510000046986.v.b.b.b ENSGT00540000073670 #8 ENSGT01000000221142 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00390000009320.cb ENSGT00940000158222.ib.b ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 leopard MODERN SPECIES 139 ENSPPRG00000010766 #13 ENSPPRG00000010762 #13 CDKL5 (ENSPPRG00000010754) #15 RS1 (ENSPPRG00000010703) #17 PPEF1 (ENSPPRG00000010688) #18 PHKA2 (ENSPPRG00000010549) #19 ADGRG2 (ENSPPRG00000010256) #20 ENSPPRG00000008810 PDHA1 (ENSPPRG00000008782) #22 MAP3K15 (ENSPPRG00000008639) #23 SH3KBP1 (ENSPPRG00000008569) #24 BCLAF3 (ENSPPRG00000008464) #25 MAP7D2 (ENSPPRG00000008395) #26 ENSPPRG00000008180 #27 RPS6KA3 (ENSPPRG00000008105) #28 ENSPPRG00000008049 lion MODERN SPECIES 88 RBBP7 (ENSPLOG00000015390) REPS2 (ENSPLOG00000015573) #7 ENSPLOG00000015930 #8 ENSPLOG00000015961 NHS (ENSPLOG00000016019) #9 RAI2 (ENSPLOG00000016300) #11 SCML2 (ENSPLOG00000016350) #13 CDKL5 (ENSPLOG00000016436) #15 ENSPLOG00000016465 #16 RS1 (ENSPLOG00000016497) #17 PPEF1 (ENSPLOG00000016638) #18 PHKA2 (ENSPLOG00000016957) #19 ADGRG2 (ENSPLOG00000017564) #20 ENSPLOG00000019887 ENSPLOG00000019908 PDHA1 (ENSPLOG00000019955) #22 MAP3K15 (ENSPLOG00000020043) #23 SH3KBP1 (ENSPLOG00000020327) #24 BCLAF3 (ENSPLOG00000020503) #25 MAP7D2 (ENSPLOG00000020581) #26 EIF1AX (ENSPLOG00000020933) #27 RPS6KA3 (ENSPLOG00000021031) #28 CYBB (ENSPLOG00000021184) DYNLT3 (ENSPLOG00000021233) ENSPLOG00000021250 ENSPLOG00000021262 SYTL5 (ENSPLOG00000021282) ENSPLOG00000021386 OTC (ENSPLOG00000021548) TSPAN7 (ENSPLOG00000021583) MID1IP1 (ENSPLOG00000021611) Tiger MODERN SPECIES 323 ENSPTIG00000017604 #13 CDKL5 (ENSPTIG00000018564) #15 RS1 (ENSPTIG00000019847) #17 PPEF1 (ENSPTIG00000020149) #18 PHKA2 (ENSPTIG00000004654) #19 ADGRG2 (ENSPTIG00000007761) #20 PDHA1 (ENSPTIG00000019524) #22 MAP3K15 (ENSPTIG00000021189) #23 BCLAF3 (ENSPTIG00000006480) #25 MAP7D2 (ENSPTIG00000009089) #26 ENSPTIG00000012582 #27 RPS6KA3 (ENSPTIG00000013422) #28 ENSPTIG00000015099 Cat MODERN SPECIES 252 RBBP7 (ENSFCAG00000028919) REPS2 (ENSFCAG00000006527) #7 ENSFCAG00000052354 #8 NHS (ENSFCAG00000000186) #9 ENSFCAG00000043428 #10 ENSFCAG00000047052 ENSFCAG00000053338 #12 SCML2 (ENSFCAG00000006438) #13 CDKL5 (ENSFCAG00000001075) #15 ENSFCAG00000026145 #16 RS1 (ENSFCAG00000037717) #17 PPEF1 (ENSFCAG00000001528) #18 PHKA2 (ENSFCAG00000001529) #19 ADGRG2 (ENSFCAG00000018328) #20 ENSFCAG00000006395 PDHA1 (ENSFCAG00000012903) #22 MAP3K15 (ENSFCAG00000012906) #23 SH3KBP1 (ENSFCAG00000003908) #24 BCLAF3 (ENSFCAG00000003909) #25 MAP7D2 (ENSFCAG00000010791) #26 EIF1AX (ENSFCAG00000035249) #27 RPS6KA3 (ENSFCAG00000010795) #28 ENSFCAG00000053775 ENSFCAG00000049761 CNKSR2 (ENSFCAG00000026807) #29 SMPX (ENSFCAG00000037718) #31 MBTPS2 (ENSFCAG00000029861) #32 SMS (ENSFCAG00000002434) #33 PHEX (ENSFCAG00000023221) #34 ENSFCAG00000051651 ENSFCAG00000038497 Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Chiroptera ANCESTRAL SPECIES 25 ENSGT00530000064238 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Microchiroptera ANCESTRAL SPECIES 25 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00540000073670 #8 ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Microbat MODERN SPECIES 986 RBBP7 (ENSMLUG00000006194) ENSMLUG00000028073 REPS2 (ENSMLUG00000008125) #7 NHS (ENSMLUG00000015408) #9 ENSMLUG00000029397 #10 RAI2 (ENSMLUG00000015416) #11 SCML2 (ENSMLUG00000015450) #13 CDKL5 (ENSMLUG00000006808) #15 RS1 (ENSMLUG00000006836) #17 PPEF1 (ENSMLUG00000005487) #18 PHKA2 (ENSMLUG00000015264) #19 SCARB1 (ENSMLUG00000002680) ADGRG2 (ENSMLUG00000005218) #20 ENSMLUG00000030082 ENSMLUG00000011884 PDHA1 (ENSMLUG00000012932) #22 MAP3K15 (ENSMLUG00000012936) #23 ENSMLUG00000025007 SH3KBP1 (ENSMLUG00000012949) #24 BCLAF3 (ENSMLUG00000012956) #25 MAP7D2 (ENSMLUG00000012967) #26 ENSMLUG00000012977 #27 RPS6KA3 (ENSMLUG00000012980) #28 Greater horseshoe bat MODERN SPECIES RBBP7 (ENSRFEG00010011331) ENSRFEG00010011296 ENSRFEG00010011230 #8 REPS2 (ENSRFEG00010010751) #7 ENSRFEG00010010721 NHS (ENSRFEG00010010332) #9 ENSRFEG00010010269 #10 RAI2 (ENSRFEG00010010245) #11 ENSRFEG00010010207 SCML2 (ENSRFEG00010010166) #13 CDKL5 (ENSRFEG00010010106) #15 RS1 (ENSRFEG00010010035) #17 PPEF1 (ENSRFEG00010009902) #18 PHKA2 (ENSRFEG00010009773) #19 ADGRG2 (ENSRFEG00010009414) #20 PDHA1 (ENSRFEG00010009265) #22 MAP3K15 (ENSRFEG00010009034) #23 SH3KBP1 (ENSRFEG00010008770) #24 BCLAF3 (ENSRFEG00010008652) #25 MAP7D2 (ENSRFEG00010008522) #26 EIF1AX (ENSRFEG00010008355) #27 RPS6KA3 (ENSRFEG00010008249) #28 ENSRFEG00010008206 CNKSR2 (ENSRFEG00010007889) #29 KLHL34 (ENSRFEG00010007846) #30 SMPX (ENSRFEG00010007815) #31 ENSRFEG00010007751 MBTPS2 (ENSRFEG00010007702) #32 ENSRFEG00010007656 #33 PHEX (ENSRFEG00010007442) #34 ENSRFEG00010007428 Megabat MODERN SPECIES 539 PDHA1 (ENSPVAG00000005420) #22 MAP3K15 (ENSPVAG00000005426) #23 SH3KBP1 (ENSPVAG00000005430) #24 Equus ANCESTRAL SPECIES 48 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT01090000261388 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00940000167584.b ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 Horse MODERN SPECIES 480 ENSECAG00000013855 TXLNG (ENSECAG00000014123) RBBP7 (ENSECAG00000019979) REPS2 (ENSECAG00000009429) #7 NHS (ENSECAG00000020766) #9 ENSECAG00000017851 ENSECAG00000030878 #10 RAI2 (ENSECAG00000006060) #11 ENSECAG00000033783 #12 SCML2 (ENSECAG00000022025) #13 CDKL5 (ENSECAG00000007008) #15 RS1 (ENSECAG00000012117) #17 PPEF1 (ENSECAG00000013892) #18 PHKA2 (ENSECAG00000004868) #19 ADGRG2 (ENSECAG00000023252) #20 PDHA1 (ENSECAG00000001964) #22 MAP3K15 (ENSECAG00000022251) #23 SH3KBP1 (ENSECAG00000017758) #24 BCLAF3 (ENSECAG00000024666) MAP7D2 (ENSECAG00000000072) #26 EIF1AX (ENSECAG00000006469) #27 RPS6KA3 (ENSECAG00000011322) #28 ENSECAG00000047809 ENSECAG00000049869 CNKSR2 (ENSECAG00000000149) #29 ENSECAG00000044474 KLHL34 (ENSECAG00000018669) #30 SMPX (ENSECAG00000058470) #31 MBTPS2 (ENSECAG00000000437) SMS (ENSECAG00000017447) #33 PHEX (ENSECAG00000011455) #34 Donkey MODERN SPECIES 36 ENSEASG00005007934 ENSEASG00005024714 ENSEASG00005024352 ENSEASG00005038774 ENSEASG00005036870 ENSEASG00005032700 ENSEASG00005000797 #10 ENSEASG00005000808 #11 ENSEASG00005027646 #12 SCML2 (ENSEASG00005022494) #13 CDKL5 (ENSEASG00005022515) #15 RS1 (ENSEASG00005022504) #17 PPEF1 (ENSEASG00005022499) #18 ENSEASG00005025600 #19 ADGRG2 (ENSEASG00005014281) #20 PDHA1 (ENSEASG00005014303) #22 MAP3K15 (ENSEASG00005014304) #23 SH3KBP1 (ENSEASG00005014314) #24 ENSEASG00005035168 #35 ENSEASG00005034136 ENSEASG00005014696 #25 MAP7D2 (ENSEASG00005014697) #26 EIF1AX (ENSEASG00005009834) #27 RPS6KA3 (ENSEASG00005014705) #28 CNKSR2 (ENSEASG00005007178) #29 KLHL34 (ENSEASG00005037044) #30 SMPX (ENSEASG00005007668) #31 ENSEASG00005020041 SMS (ENSEASG00005020046) #33 PHEX (ENSEASG00005023744) #34 ENSEASG00005037356 #35 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Suina ANCESTRAL SPECIES 41 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Chacoan peccary MODERN SPECIES 109 S100G (ENSCWAG00000014113) CTPS2 (ENSCWAG00000013931) SYAP1 (ENSCWAG00000013836) TXLNG (ENSCWAG00000013662) RBBP7 (ENSCWAG00000013432) REPS2 (ENSCWAG00000013113) #7 NHS (ENSCWAG00000012785) #9 RAI2 (ENSCWAG00000012729) #11 SCML2 (ENSCWAG00000012506) #13 CDKL5 (ENSCWAG00000012250) #15 RS1 (ENSCWAG00000012171) #17 PPEF1 (ENSCWAG00000012062) #18 PHKA2 (ENSCWAG00000011981) #19 ADGRG2 (ENSCWAG00000004734) #20 ENSCWAG00000004397 PDHA1 (ENSCWAG00000004308) #22 MAP3K15 (ENSCWAG00000004160) #23 SH3KBP1 (ENSCWAG00000004005) #24 BCLAF3 (ENSCWAG00000003903) #25 MAP7D2 (ENSCWAG00000003689) #26 EIF1AX (ENSCWAG00000003625) #27 RPS6KA3 (ENSCWAG00000003548) #28 Pig MODERN SPECIES 300 RBBP7 (ENSSSCG00000012149) REPS2 (ENSSSCG00000012150) #7 NHS (ENSSSCG00000012151) #9 ENSSSCG00000012152 #10 RAI2 (ENSSSCG00000012153) #11 ENSSSCG00000060254 ENSSSCG00000050671 ##21 ENSSSCG00000041054 #12 SCML2 (ENSSSCG00000012155) #13 CDKL5 (ENSSSCG00000012156) #15 RS1 (ENSSSCG00000026932) #17 PPEF1 (ENSSSCG00000030274) #18 PHKA2 (ENSSSCG00000012157) #19 ADGRG2 (ENSSSCG00000029756) #20 ENSSSCG00000040104 PDHA1 (ENSSSCG00000023643) #22 MAP3K15 (ENSSSCG00000020735) #23 SH3KBP1 (ENSSSCG00000012160) #24 BCLAF3 (ENSSSCG00000023334) #25 MAP7D2 (ENSSSCG00000012161) #26 EIF1AX (ENSSSCG00000032223) #27 RPS6KA3 (ENSSSCG00000012163) #28 ENSSSCG00000060065 CNKSR2 (ENSSSCG00000012164) #29 KLHL34 (ENSSSCG00000033979) #30 SMPX (ENSSSCG00000032720) #31 ENSSSCG00000012165 SMS (ENSSSCG00000012166) #33 PHEX (ENSSSCG00000012167) #34 ENSSSCG00000012169 #35 PTCHD1 (ENSSSCG00000032433) #36 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Camelidae ANCESTRAL SPECIES 59 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00510000047522 ENSGT00940000164183 #35 ENSGT00940000157080 #36 Alpaca MODERN SPECIES 377 PDHA1 (ENSVPAG00000009480) #22 ENSVPAG00000009481 #23 SH3KBP1 (ENSVPAG00000009482) #24 Arabian camel MODERN SPECIES 204 S100G (ENSCDRG00005013884) SYAP1 (ENSCDRG00005013928) ENSCDRG00005014067 RBBP7 (ENSCDRG00005014158) REPS2 (ENSCDRG00005014399) #7 NHS (ENSCDRG00005014939) #9 SCML1 (ENSCDRG00005015136) RAI2 (ENSCDRG00005015229) #11 SCML2 (ENSCDRG00005015356) #13 CDKL5 (ENSCDRG00005015479) #15 ENSCDRG00005015576 RS1 (ENSCDRG00005015612) #17 PPEF1 (ENSCDRG00005015683) #18 PHKA2 (ENSCDRG00005015770) #19 ADGRG2 (ENSCDRG00005016282) #20 PDHA1 (ENSCDRG00005021482) #22 SH3KBP1 (ENSCDRG00005021507) #24 BCLAF3 (ENSCDRG00005021538) #25 MAP7D2 (ENSCDRG00005021545) #26 EIF1AX (ENSCDRG00005021559) #27 RPS6KA3 (ENSCDRG00005021577) #28 CNKSR2 (ENSCDRG00005021599) #29 KLHL34 (ENSCDRG00005021612) #30 SMPX (ENSCDRG00005021613) #31 ENSCDRG00005021614 MBTPS2 (ENSCDRG00005021615) #32 SMS (ENSCDRG00005021617) #33 PHEX (ENSCDRG00005021620) #34 ENSCDRG00005021631 #35 PTCHD1 (ENSCDRG00005021635) #36 ENSCDRG00005021636 Artiodactyla_b ANCESTRAL SPECIES 24 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Cetacea ANCESTRAL SPECIES 21 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT01010000222890.b ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009724.l.y.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 Odontoceti ANCESTRAL SPECIES 22 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT01010000222890.b ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Odontoceti_a ANCESTRAL SPECIES 20 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407.m #13 ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT01010000222890.b ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Odontoceti_b ANCESTRAL SPECIES 22 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407.m #13 ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT01010000222890.b ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00940000172088 ENSGT00940000157313 #34 ENSGT00940000164207 Monodontidae ANCESTRAL SPECIES 30 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00950000183210.d.a.c.a.a.a ENSGT00940000159407.m #13 ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00940000160729.b ENSGT01010000222890.b ENSGT00390000002034.j ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00940000172088 Narwhal MODERN SPECIES 309 RBBP7 (ENSMMNG00015020317) REPS2 (ENSMMNG00015010789) #7 ENSMMNG00015010820 #8 NHS (ENSMMNG00015010825) #9 ENSMMNG00015010836 #10 RAI2 (ENSMMNG00015010851) #11 ENSMMNG00015010865 ENSMMNG00015010874 ENSMMNG00015010891 #13 ENSMMNG00015010922 CDKL5 (ENSMMNG00015010933) #15 RS1 (ENSMMNG00015010947) #17 PPEF1 (ENSMMNG00015010972) #18 PHKA2 (ENSMMNG00015011017) #19 ADGRG2 (ENSMMNG00015011189) #20 PDHA1 (ENSMMNG00015011306) #22 SH3KBP1 (ENSMMNG00015011427) #24 ENSMMNG00015011582 ENSMMNG00015011595 ENSMMNG00015011610 ENSMMNG00015011630 BCLAF3 (ENSMMNG00015011642) #25 MAP7D2 (ENSMMNG00015011661) #26 ENSMMNG00015011692 #27 RPS6KA3 (ENSMMNG00015011742) #28 ENSMMNG00015011921 ENSMMNG00015011934 CNKSR2 (ENSMMNG00015012238) #29 KLHL34 (ENSMMNG00015012985) #30 SMPX (ENSMMNG00015012992) #31 ENSMMNG00015012997 Beluga whale MODERN SPECIES 41 REPS2 (ENSDLEG00000020540) #7 ENSDLEG00000020552 #8 ENSDLEG00000020554 NHS (ENSDLEG00000020557) #9 SCML1 (ENSDLEG00000020562) #10 RAI2 (ENSDLEG00000020567) #11 ENSDLEG00000020569 ENSDLEG00000020574 #13 ENSDLEG00000020579 ENSDLEG00000020586 CDKL5 (ENSDLEG00000020591) #15 RS1 (ENSDLEG00000020598) #17 PPEF1 (ENSDLEG00000020612) #18 PHKA2 (ENSDLEG00000020633) #19 ADGRG2 (ENSDLEG00000020709) #20 PDHA1 (ENSDLEG00000020859) #22 MAP3K15 (ENSDLEG00000020876) #23 SH3KBP1 (ENSDLEG00000020919) #24 ENSDLEG00000020966 ENSDLEG00000020970 ENSDLEG00000020972 BCLAF3 (ENSDLEG00000020974) #25 MAP7D2 (ENSDLEG00000020985) #26 EIF1AX (ENSDLEG00000021017) #27 RPS6KA3 (ENSDLEG00000021020) #28 ENSDLEG00000021027 ENSDLEG00000021028 CNKSR2 (ENSDLEG00000021034) #29 SMPX (ENSDLEG00000021052) #31 ENSDLEG00000021055 MBTPS2 (ENSDLEG00000021061) #32 Vaquita MODERN SPECIES 34 RBBP7 (ENSPSNG00000019143) REPS2 (ENSPSNG00000019316) #7 ENSPSNG00000019537 #8 ENSPSNG00000019571 NHS (ENSPSNG00000019626) #9 ENSPSNG00000019850 #10 RAI2 (ENSPSNG00000019870) #11 ENSPSNG00000019901 #13 ENSPSNG00000019959 CDKL5 (ENSPSNG00000020000) #15 ENSPSNG00000020052 RS1 (ENSPSNG00000020065) #17 PPEF1 (ENSPSNG00000020159) #18 PHKA2 (ENSPSNG00000020358) #19 ADGRG2 (ENSPSNG00000020539) #20 PDHA1 (ENSPSNG00000020773) #22 SH3KBP1 (ENSPSNG00000021240) #24 ENSPSNG00000021512 BCLAF3 (ENSPSNG00000021539) #25 MAP7D2 (ENSPSNG00000021591) #26 EIF1AX (ENSPSNG00000021671) #27 RPS6KA3 (ENSPSNG00000021768) #28 ENSPSNG00000021849 ENSPSNG00000021866 CNKSR2 (ENSPSNG00000022151) #29 KLHL34 (ENSPSNG00000022394) #30 SMPX (ENSPSNG00000022398) #31 ENSPSNG00000022401 ENSPSNG00000022411 ENSPSNG00000022423 #33 PHEX (ENSPSNG00000022431) #34 Dolphin MODERN SPECIES 314 PDHA1 (ENSTTRG00000000660) #22 MAP3K15 (ENSTTRG00000000661) #23 Sperm whale MODERN SPECIES 13 ENSPCTG00005005153 RBBP7 (ENSPCTG00005005178) REPS2 (ENSPCTG00005005319) #7 ENSPCTG00005005421 NHS (ENSPCTG00005005450) #9 SCML1 (ENSPCTG00005005559) #10 ENSPCTG00005005600 #11 ENSPCTG00005005614 #11 SCML2 (ENSPCTG00005005727) #13 ENSPCTG00005005791 CDKL5 (ENSPCTG00005005814) #15 RS1 (ENSPCTG00005005843) #17 PPEF1 (ENSPCTG00005005905) #18 PHKA2 (ENSPCTG00005006139) #19 ADGRG2 (ENSPCTG00005006920) #20 PDHA1 (ENSPCTG00005011695) #22 SH3KBP1 (ENSPCTG00005011856) #24 BCLAF3 (ENSPCTG00005012120) #25 MAP7D2 (ENSPCTG00005012303) #26 EIF1AX (ENSPCTG00005012927) #27 RPS6KA3 (ENSPCTG00005013127) #28 ENSPCTG00005013565 ENSPCTG00005013591 CNKSR2 (ENSPCTG00005013662) #29 KLHL34 (ENSPCTG00005014125) #30 SMPX (ENSPCTG00005014144) #31 ENSPCTG00005014208 SMS (ENSPCTG00005014394) #33 PHEX (ENSPCTG00005014479) #34 ENSPCTG00005014734 ENSPCTG00005014773 Blue whale MODERN SPECIES 40 ENSBMSG00010021135 ENSBMSG00010021146 #10 RAI2 (ENSBMSG00010021187) #11 ENSBMSG00010013811 #13 ENSBMSG00010013823 #13 ENSBMSG00010013867 #13 ENSBMSG00010013905 CDKL5 (ENSBMSG00010013954) #15 ENSBMSG00010013988 ENSBMSG00010013995 RS1 (ENSBMSG00010014012) #17 PPEF1 (ENSBMSG00010014080) #18 PHKA2 (ENSBMSG00010014126) #19 ADGRG2 (ENSBMSG00010014260) #20 ENSBMSG00010014456 PDHA1 (ENSBMSG00010014498) #22 MAP3K15 (ENSBMSG00010014594) #23 SH3KBP1 (ENSBMSG00010014785) #24 ENSBMSG00010014991 BCLAF3 (ENSBMSG00010015038) #25 MAP7D2 (ENSBMSG00010015124) #26 ENSBMSG00010015217 #27 RPS6KA3 (ENSBMSG00010015348) #28 ENSBMSG00010015592 ENSBMSG00010015603 ENSBMSG00010015623 CNKSR2 (ENSBMSG00010015971) #29 KLHL34 (ENSBMSG00010021180) #30 SMPX (ENSBMSG00010021188) #31 ENSBMSG00010021193 ENSBMSG00010021206 #33 Pecora ANCESTRAL SPECIES 34 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 Percora_a ANCESTRAL SPECIES 22 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00940000160347.a ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 Siberian musk deer MODERN SPECIES 39 ENSMMSG00000016545 REPS2 (ENSMMSG00000016088) #7 ENSMMSG00000016017 NHS (ENSMMSG00000015809) #9 ENSMMSG00000015771 #10 RAI2 (ENSMMSG00000015760) #11 ENSMMSG00000015753 ENSMMSG00000015735 SCML2 (ENSMMSG00000015652) #13 CDKL5 (ENSMMSG00000015599) #15 RS1 (ENSMMSG00000015564) #17 PPEF1 (ENSMMSG00000015507) #18 PHKA2 (ENSMMSG00000015473) #19 ADGRG2 (ENSMMSG00000015124) #20 ENSMMSG00000015071 PDHA1 (ENSMMSG00000015042) #22 ENSMMSG00000015019 ENSMMSG00000015007 MAP3K15 (ENSMMSG00000014913) #23 ENSMMSG00000014890 ENSMMSG00000014880 SH3KBP1 (ENSMMSG00000014761) #24 BCLAF3 (ENSMMSG00000014667) #25 MAP7D2 (ENSMMSG00000014040) #26 ENSMMSG00000013961 #27 RPS6KA3 (ENSMMSG00000013842) #28 ENSMMSG00000013809 ENSMMSG00000013799 CNKSR2 (ENSMMSG00000006728) #29 KLHL34 (ENSMMSG00000006431) #30 SMPX (ENSMMSG00000006404) #31 Bovidae ANCESTRAL SPECIES 23 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00940000160347.a ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 Caprinae DUPLICATION Caprinae DUPLICATION Caprinae ANCESTRAL SPECIES ENSGT00530000063174.a.i.u.a #22 Goat MODERN SPECIES ENSCHIG00000021084 MECOM (ENSCHIG00000015174) ENSCHIG00000001263 GOLIM4 (ENSCHIG00000024949) ENSCHIG00000014733 ENSCHIG00000000612 ENSCHIG00000021309 WDR49 (ENSCHIG00000013106) SERPINI2 (ENSCHIG00000018550) ZBBX (ENSCHIG00000025980) BCHE (ENSCHIG00000026772) SLITRK3 (ENSCHIG00000006438) ENSCHIG00000016725 SI (ENSCHIG00000010240) ENSCHIG00000011051 ENSCHIG00000023820 #22 OTOL1 (ENSCHIG00000012937) SPTSSB (ENSCHIG00000009108) NMD3 (ENSCHIG00000016015) ENSCHIG00000026689 ENSCHIG00000020415 ENSCHIG00000014679 PPM1L (ENSCHIG00000003416) ENSCHIG00000022304 ARL14 (ENSCHIG00000006468) KPNA4 (ENSCHIG00000027240) TRIM59 (ENSCHIG00000013800) SMC4 (ENSCHIG00000018909) IFT80 (ENSCHIG00000024872) C3orf80 (ENSCHIG00000010005) ENSCHIG00000021362 Rambouillet Sheep MODERN SPECIES LRRC34 (ENSOARG00020001962) MYNN (ENSOARG00020002108) ACTRT3 (ENSOARG00020002123) MECOM (ENSOARG00020002184) ENSOARG00020002458 ENSOARG00020002481 GOLIM4 (ENSOARG00020002523) SERPINI1 (ENSOARG00020002561) PDCD10 (ENSOARG00020002590) SERPINI2 (ENSOARG00020002638) BCHE (ENSOARG00020002687) SLITRK3 (ENSOARG00020002710) SI (ENSOARG00020002809) ENSOARG00020004705 ENSOARG00020004716 ENSOARG00020004733 #22 NMD3 (ENSOARG00020004805) SPTSSB (ENSOARG00020004978) ENSOARG00020004989 ENSOARG00020005007 ENSOARG00020005029 PPM1L (ENSOARG00020005069) ENSOARG00020005147 ARL14 (ENSOARG00020005166) KPNA4 (ENSOARG00020005180) ENSOARG00020005281 SMC4 (ENSOARG00020005306) IFT80 (ENSOARG00020005544) ENSOARG00020005593 C3orf80 (ENSOARG00020005601) IL12A (ENSOARG00020005615) Caprinae ANCESTRAL SPECIES 46 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a.r #19 ENSGT00940000156341 #20 ENSGT00940000160347.a ENSGT00530000063174.a.i.u.b #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 Rambouillet Sheep MODERN SPECIES 205 ENSOARG00020009586 CTPS2 (ENSOARG00020009621) S100G (ENSOARG00020009888) SYAP1 (ENSOARG00020009929) TXLNG (ENSOARG00020010154) RBBP7 (ENSOARG00020010350) REPS2 (ENSOARG00020010562) #7 NHS (ENSOARG00020011266) #9 RAI2 (ENSOARG00020011877) #11 CDKL5 (ENSOARG00020012130) #15 RS1 (ENSOARG00020012237) #17 ENSOARG00020012454 PHKA2 (ENSOARG00020012486) #19 ADGRG2 (ENSOARG00020013283) #20 ENSOARG00020014052 PDHA1 (ENSOARG00020014126) #22 MAP3K15 (ENSOARG00020014315) #23 SH3KBP1 (ENSOARG00020014389) #24 ENSOARG00020014649 MAP7D2 (ENSOARG00020014919) #26 EIF1AX (ENSOARG00020015967) #27 RPS6KA3 (ENSOARG00020016195) #28 ENSOARG00020016638 ENSOARG00020016661 ENSOARG00020016684 ENSOARG00020016703 ENSOARG00020016721 ENSOARG00020016730 CNKSR2 (ENSOARG00020016850) #29 KLHL34 (ENSOARG00020022568) #30 SMPX (ENSOARG00020022580) #31 Goat MODERN SPECIES 130 ENSCHIG00000000162 #22 ENSCHIG00000000233 #23 Caprinae ANCESTRAL SPECIES ENSGT00530000063174.a.i.v #22 Goat MODERN SPECIES 43 TMEM185A (ENSCHIG00000004747) ENSCHIG00000000434 ENSCHIG00000019036 ENSCHIG00000018828 ENSCHIG00000026446 #22 ENSCHIG00000010772 ENSCHIG00000022330 ENSCHIG00000010608 Bovinae ANCESTRAL SPECIES 32 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00940000160347.a.c ENSGT00940000160347.a.d.a.b ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000167584 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00950000185346 Bos ANCESTRAL SPECIES 32 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00900000141068.e.a.e.a.a ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00940000160347.a.c ENSGT00940000160347.a.d.a.b ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.l ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000167584 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Bos_a ANCESTRAL SPECIES 63 ENSGT00940000160347.a.d.a.b ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.l ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00940000154451.l.b.b.a.a.b ENSGT00940000167584 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Domestic yak MODERN SPECIES 69 ENSBGRG00000014636 ENSBGRG00000014610 ENSBGRG00000014583 PDHA1 (ENSBGRG00000014128) #22 ENSBGRG00000013897 #23 ENSBGRG00000012957 #23 SH3KBP1 (ENSBGRG00000011750) #24 BCLAF3 (ENSBGRG00000011387) #25 MAP7D2 (ENSBGRG00000011015) #26 ENSBGRG00000010670 #27 RPS6KA3 (ENSBGRG00000010065) #28 ENSBGRG00000009948 ENSBGRG00000009908 CNKSR2 (ENSBGRG00000009403) #29 KLHL34 (ENSBGRG00000009352) #30 SMPX (ENSBGRG00000009309) #31 ENSBGRG00000009234 MBTPS2 (ENSBGRG00000009064) #32 ENSBGRG00000009009 Wild yak MODERN SPECIES 932 PDHA1 (ENSBMUG00000016808) #22 MAP3K15 (ENSBMUG00000016858) #23 SH3KBP1 (ENSBMUG00000016923) #24 BCLAF3 (ENSBMUG00000016986) #25 MAP7D2 (ENSBMUG00000017083) #26 EIF1AX (ENSBMUG00000017161) #27 RPS6KA3 (ENSBMUG00000017229) #28 ENSBMUG00000017267 ENSBMUG00000017276 ENSBMUG00000017283 ENSBMUG00000017291 CNKSR2 (ENSBMUG00000017867) #29 SMPX (ENSBMUG00000018671) #31 ENSBMUG00000018702 SMS (ENSBMUG00000018739) #33 PHEX (ENSBMUG00000018766) #34 Bos_b ANCESTRAL SPECIES 39 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00900000141068.e.a.e.a.a ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00940000160347.a.c ENSGT00940000160347.a.d.a.a.a ENSGT00940000160347.a.d.a.b ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.l ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000154451.l.b.b.a.a.b ENSGT00940000167584 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Cow MODERN SPECIES 177 REPS2 (ENSBTAG00000031261) #7 ENSBTAG00000031256 ENSBTAG00000053299 NHS (ENSBTAG00000039195) #9 SCML1 (ENSBTAG00000017649) #10 RAI2 (ENSBTAG00000039049) #11 SCML2 (ENSBTAG00000009420) #13 CDKL5 (ENSBTAG00000007428) #15 RS1 (ENSBTAG00000031145) #17 PPEF1 (ENSBTAG00000009545) #18 PHKA2 (ENSBTAG00000015355) #19 ADGRG2 (ENSBTAG00000000576) #20 MGC134232 (ENSBTAG00000038660) ENSBTAG00000037550 ENSBTAG00000051616 PDHA1 (ENSBTAG00000019852) #22 MAP3K15 (ENSBTAG00000019855) #23 SH3KBP1 (ENSBTAG00000003727) #24 BCLAF3 (ENSBTAG00000021962) #25 MAP7D2 (ENSBTAG00000017628) #26 EIF1AX (ENSBTAG00000017633) #27 RPS6KA3 (ENSBTAG00000017639) #28 ENSBTAG00000047699 ENSBTAG00000050929 ENSBTAG00000013625 CNKSR2 (ENSBTAG00000044202) #29 SMPX (ENSBTAG00000015204) #31 MBTPS2 (ENSBTAG00000008183) SMS (ENSBTAG00000018382) #33 ENSBTAG00000052700 PHEX (ENSBTAG00000000419) #34 Hybrid Bos Indicus MODERN SPECIES 315 RBBP7 (ENSBIXG00005027966) REPS2 (ENSBIXG00005027877) #7 NHS (ENSBIXG00005027684) #9 ENSBIXG00005027553 ENSBIXG00005027526 #10 RAI2 (ENSBIXG00005027505) #11 SCML2 (ENSBIXG00005005620) #13 CDKL5 (ENSBIXG00005005323) #15 RS1 (ENSBIXG00005005321) #17 PPEF1 (ENSBIXG00005004677) #18 PHKA2 (ENSBIXG00005027106) #19 ADGRG2 (ENSBIXG00005026817) #20 ENSBIXG00005026541 ENSBIXG00005026535 ENSBIXG00005005571 ENSBIXG00005026498 #22 MAP3K15 (ENSBIXG00005004522) #23 SH3KBP1 (ENSBIXG00005026195) #24 ENSBIXG00005025849 BCLAF3 (ENSBIXG00005025827) #25 MAP7D2 (ENSBIXG00005025740) #26 EIF1AX (ENSBIXG00005025615) #27 RPS6KA3 (ENSBIXG00005025516) #28 ENSBIXG00005024937 ENSBIXG00005024903 ENSBIXG00005024880 ENSBIXG00005024836 CNKSR2 (ENSBIXG00005024732) #29 SMPX (ENSBIXG00005024419) #31 MBTPS2 (ENSBIXG00005024353) #32 ENSBIXG00005024303 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 1323 CAPN6 (ENSCHYG00000023258) DCX (ENSCHYG00000023321) SERTM2 (ENSCHYG00000023372) ENSCHYG00000023393 ENSCHYG00000023483 ENSCHYG00000023716 TRPC5OS (ENSCHYG00000023871) ENSCHYG00000023881 LHFPL1 (ENSCHYG00000023922) AMOT (ENSCHYG00000023944) HTR2C (ENSCHYG00000024246) IL13RA2 (ENSCHYG00000024287) LRCH2 (ENSCHYG00000008772) PLS3 (ENSCHYG00000008909) ENSCHYG00000009546 ENSCHYG00000009598 #22 AGTR2 (ENSCHYG00000009628) ENSCHYG00000009726 CT83 (ENSCHYG00000009841) ENSCHYG00000009897 ENSCHYG00000009929 ENSCHYG00000009954 KLHL13 (ENSCHYG00000010013) WDR44 (ENSCHYG00000010370) DOCK11 (ENSCHYG00000011126) IL13RA1 (ENSCHYG00000011896) ENSCHYG00000012039 LONRF3 (ENSCHYG00000012064) ENSCHYG00000012323 ENSCHYG00000012357 PGRMC1 (ENSCHYG00000012477) Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 1323 RAI2 (ENSCHYG00000018670) #11 ENSCHYG00000018619 #10 ENSCHYG00000018572 NHS (ENSCHYG00000018180) #9 REPS2 (ENSCHYG00000017518) #7 SYAP1 (ENSCHYG00000017346) ENSCHYG00000017066 #12 SCML2 (ENSCHYG00000016775) #13 CDKL5 (ENSCHYG00000016442) #15 RS1 (ENSCHYG00000016355) #17 PPEF1 (ENSCHYG00000016044) #18 ENSCHYG00000015917 ENSCHYG00000015895 PHKA2 (ENSCHYG00000014501) #19 ADGRG2 (ENSCHYG00000025589) #20 ENSCHYG00000025479 #22 ENSCHYG00000025460 MAP3K15 (ENSCHYG00000025350) #23 SH3KBP1 (ENSCHYG00000024812) #24 BCLAF3 (ENSCHYG00000024575) #25 MAP7D2 (ENSCHYG00000024324) #26 ENSCHYG00000024281 EIF1AX (ENSCHYG00000024205) #27 RPS6KA3 (ENSCHYG00000023911) #28 ENSCHYG00000023852 ENSCHYG00000023829 CNKSR2 (ENSCHYG00000023268) #29 KLHL34 (ENSCHYG00000023198) #30 SMPX (ENSCHYG00000023180) #31 MBTPS2 (ENSCHYG00000023135) #32 ENSCHYG00000023111 Yarkand deer MODERN SPECIES 61 ENSCHYG00000009014 ENSCHYG00000008975 #22 Yarkand deer MODERN SPECIES 1323 ENSCHYG00000016961 ZMAT1 (ENSCHYG00000017092) BEX5 (ENSCHYG00000017246) ENSCHYG00000017277 TMSB15A (ENSCHYG00000017406) GPRASP1 (ENSCHYG00000017514) ENSCHYG00000017568 ENSCHYG00000017589 ENSCHYG00000017775 SRPX2 (ENSCHYG00000017819) TSPAN6 (ENSCHYG00000017982) TNMD (ENSCHYG00000018219) ENSCHYG00000018281 PCDH19 (ENSCHYG00000018307) ENSCHYG00000018423 ENSCHYG00000018452 #22 ENSCHYG00000018486 ENSCHYG00000018504 ENSCHYG00000018566 DIAPH2 (ENSCHYG00000018624) ENSCHYG00000018943 ENSCHYG00000018986 ENSCHYG00000019061 ENSCHYG00000019101 ENSCHYG00000019126 FAM133A (ENSCHYG00000019252) ENSCHYG00000019346 ENSCHYG00000019408 ENSCHYG00000019618 ENSCHYG00000019678 ENSCHYG00000019710 Eulipotyphla ANCESTRAL SPECIES 540 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 Hedgehog MODERN SPECIES 2868 PDHA1 (ENSEEUG00000005485) #22 MAP3K15 (ENSEEUG00000005668) #23 SH3KBP1 (ENSEEUG00000005862) #24 Common shrew DUPLICATION Common shrew MODERN SPECIES 4344 ENSSARG00000008912 #22 MAP3K15 (ENSSARG00000008925) #23 Common shrew MODERN SPECIES 4300 ENSSARG00000008171 #22 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Primates ANCESTRAL SPECIES 19 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Haplorrhini ANCESTRAL SPECIES 18 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Simiiformes ANCESTRAL SPECIES 9 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000154152.d.a.b ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES 28 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000154152.d.a.b.b ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.a #22 ENSGT00940000159562 #23 ENSGT00940000155886.g #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00390000003791.g.b ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Cebidae ANCESTRAL SPECIES 18 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000154152.d.a.b.b ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.a #22 ENSGT00940000159562 #23 ENSGT00940000155886.g #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00390000003791.g.b ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Marmoset MODERN SPECIES 78 ENSCJAG00000080054 NHS (ENSCJAG00000004660) #9 ENSCJAG00000078610 ENSCJAG00000082727 ENSCJAG00000023313 RAI2 (ENSCJAG00000003685) #11 SCML2 (ENSCJAG00000005875) #13 CDKL5 (ENSCJAG00000005834) #15 RS1 (ENSCJAG00000005829) #17 PPEF1 (ENSCJAG00000005798) #18 PHKA2 (ENSCJAG00000005668) #19 ENSCJAG00000082522 ADGRG2 (ENSCJAG00000005571) #20 ENSCJAG00000072791 ENSCJAG00000073410 ENSCJAG00000005496 #22 ENSCJAG00000005459 #23 BCLAF3 (ENSCJAG00000045691) #25 ENSCJAG00000022320 ENSCJAG00000079762 MAP7D2 (ENSCJAG00000005383) #26 RPS6KA3 (ENSCJAG00000005239) #28 ENSCJAG00000005365 ENSCJAG00000073658 CNKSR2 (ENSCJAG00000005220) #29 KLHL34 (ENSCJAG00000041270) #30 SMPX (ENSCJAG00000005203) #31 MBTPS2 (ENSCJAG00000046733) #32 SMS (ENSCJAG00000033933) #33 PHEX (ENSCJAG00000005121) #34 ENSCJAG00000072524 Cebidae_a ANCESTRAL SPECIES 36 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C.eb.a ENSGT00940000154152.d.a.b.b ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154174.s.a.b ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.a #22 ENSGT00940000159562 #23 ENSGT00940000155886.g #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00390000003791.g.b ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Bolivian squirrel monkey MODERN SPECIES 51 ENSSBOG00000036156 RBBP7 (ENSSBOG00000033728) ENSSBOG00000030543 REPS2 (ENSSBOG00000018047) #7 NHS (ENSSBOG00000032082) #9 SCML1 (ENSSBOG00000025279) ENSSBOG00000032775 BEND2 (ENSSBOG00000034571) SCML2 (ENSSBOG00000023475) #13 CDKL5 (ENSSBOG00000034927) #15 RS1 (ENSSBOG00000022074) #17 PPEF1 (ENSSBOG00000025564) #18 PHKA2 (ENSSBOG00000028848) #19 ADGRG2 (ENSSBOG00000036029) #20 PDHA1 (ENSSBOG00000021023) #22 MAP3K15 (ENSSBOG00000023444) #23 ENSSBOG00000026951 ENSSBOG00000036210 #24 BCLAF3 (ENSSBOG00000031024) #25 MAP7D2 (ENSSBOG00000029797) #26 ENSSBOG00000031558 #27 ENSSBOG00000029635 RPS6KA3 (ENSSBOG00000034830) #28 ENSSBOG00000018382 CNKSR2 (ENSSBOG00000029741) #29 SMPX (ENSSBOG00000033495) #31 MBTPS2 (ENSSBOG00000029363) #32 SMS (ENSSBOG00000024222) #33 ENSSBOG00000000154 PHEX (ENSSBOG00000035899) #34 Capuchin MODERN SPECIES 128 NHS (ENSCCAG00000015439) #9 SCML1 (ENSCCAG00000003357) ENSCCAG00000021224 BEND2 (ENSCCAG00000028740) SCML2 (ENSCCAG00000029741) #13 CDKL5 (ENSCCAG00000028839) #15 RS1 (ENSCCAG00000037547) #17 PPEF1 (ENSCCAG00000018308) #18 PHKA2 (ENSCCAG00000037761) #19 ADGRG2 (ENSCCAG00000021576) #20 ENSCCAG00000033194 ENSCCAG00000025967 ENSCCAG00000020724 #22 MAP3K15 (ENSCCAG00000019733) #23 ENSCCAG00000024335 #24 BCLAF3 (ENSCCAG00000021782) #25 MAP7D2 (ENSCCAG00000034873) #26 EIF1AX (ENSCCAG00000020517) #27 RPS6KA3 (ENSCCAG00000036661) #28 ENSCCAG00000026463 CNKSR2 (ENSCCAG00000029076) #29 ENSCCAG00000031773 SMPX (ENSCCAG00000028916) #31 ENSCCAG00000034966 MBTPS2 (ENSCCAG00000030619) #32 SMS (ENSCCAG00000038102) #33 PHEX (ENSCCAG00000021705) #34 ENSCCAG00000024171 Mas night monkey MODERN SPECIES 814 RBBP7 (ENSANAG00000037598) ENSANAG00000020204 ENSANAG00000020664 ENSANAG00000022723 REPS2 (ENSANAG00000031037) #7 NHS (ENSANAG00000033727) #9 SCML1 (ENSANAG00000021893) ENSANAG00000019386 ENSANAG00000037962 SCML2 (ENSANAG00000020966) #13 CDKL5 (ENSANAG00000034696) #15 RS1 (ENSANAG00000029033) #17 PPEF1 (ENSANAG00000023404) #18 PHKA2 (ENSANAG00000038435) #19 ADGRG2 (ENSANAG00000034597) #20 PDHA1 (ENSANAG00000030855) #22 MAP3K15 (ENSANAG00000034023) #23 ENSANAG00000030233 ENSANAG00000034832 #24 ENSANAG00000026646 #25 MAP7D2 (ENSANAG00000037417) #26 ENSANAG00000030856 #27 ENSANAG00000025820 RPS6KA3 (ENSANAG00000026591) #28 ENSANAG00000000067 ENSANAG00000019923 CNKSR2 (ENSANAG00000030385) #29 KLHL34 (ENSANAG00000020210) #30 SMPX (ENSANAG00000035900) #31 ENSANAG00000034743 MBTPS2 (ENSANAG00000022738) #32 Platyrrhini ANCESTRAL SPECIES ENSGT00530000063174.a.i.b #22 Cebidae ANCESTRAL SPECIES 33 ENSGT00940000157289.a.a.b ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 ENSGT00940000157075 ENSGT00940000154843.F ENSGT00390000004886 ENSGT00940000158768 ENSGT00940000156920 ENSGT00390000016974 ENSGT00390000003564 ENSGT00530000063174.a.i.b #22 ENSGT00940000157040 ENSGT00940000163455 ENSGT00950000182848.c.b.a.a ENSGT00940000156849 ENSGT00940000163315 ENSGT00390000001263 ENSGT00940000154772.r ENSGT00940000156581 ENSGT00390000006777.b ENSGT00530000063859.a ENSGT01050000244838.C.a ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158284 Cebidae_a ANCESTRAL SPECIES 42 ENSGT00940000157289.a.a.b ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 ENSGT00940000157075 ENSGT00940000154843.F ENSGT00390000004886 ENSGT00940000158768 ENSGT00940000156920 ENSGT00390000016974 ENSGT00390000003564 ENSGT00530000063174.a.i.b #22 ENSGT00940000157040 ENSGT00940000163455 ENSGT00950000182848.c.b.a.a ENSGT00390000001231.s.a.c ENSGT00940000156849 ENSGT00940000163315 ENSGT00390000001263 ENSGT00940000154772.r ENSGT00940000156581 ENSGT00390000006777.b ENSGT00530000063859.a ENSGT01050000244838.C.a ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 Capuchin MODERN SPECIES 43 NRN1 (ENSCCAG00000024735) F13A1 (ENSCCAG00000036141) LY86 (ENSCCAG00000020400) RREB1 (ENSCCAG00000021905) SSR1 (ENSCCAG00000030293) CAGE1 (ENSCCAG00000037882) RIOK1 (ENSCCAG00000024061) ENSCCAG00000033486 DSP (ENSCCAG00000002153) SNRNP48 (ENSCCAG00000035652) BMP6 (ENSCCAG00000024255) TXNDC5 (ENSCCAG00000022735) BLOC1S5 (ENSCCAG00000023842) ENSCCAG00000031071 ENSCCAG00000035126 #22 SLC35B3 (ENSCCAG00000026344) ENSCCAG00000026536 ENSCCAG00000026702 TFAP2A (ENSCCAG00000036532) ENSCCAG00000029494 ENSCCAG00000024728 GCNT2 (ENSCCAG00000038039) C6orf52 (ENSCCAG00000025777) PAK1IP1 (ENSCCAG00000030045) TMEM14C (ENSCCAG00000030819) MAK (ENSCCAG00000028841) GCM2 (ENSCCAG00000029665) SYCP2L (ENSCCAG00000027217) ELOVL2 (ENSCCAG00000020667) SMIM13 (ENSCCAG00000001111) Marmoset MODERN SPECIES 16 RREB1 (ENSCJAG00000021358) SSR1 (ENSCJAG00000044370) CAGE1 (ENSCJAG00000021351) RIOK1 (ENSCJAG00000042960) DSP (ENSCJAG00000021333) SNRNP48 (ENSCJAG00000021330) ENSCJAG00000077015 ENSCJAG00000074889 ENSCJAG00000056342 BMP6 (ENSCJAG00000021326) TXNDC5 (ENSCJAG00000021322) ENSCJAG00000069775 ENSCJAG00000069672 BLOC1S5 (ENSCJAG00000010580) EEF1E1 (ENSCJAG00000079478) ENSCJAG00000080871 #22 SLC35B3 (ENSCJAG00000021320) ENSCJAG00000083524 ENSCJAG00000073361 ENSCJAG00000071644 ENSCJAG00000072059 ENSCJAG00000085139 ENSCJAG00000072812 ENSCJAG00000082762 TFAP2A (ENSCJAG00000021312) ENSCJAG00000021709 ENSCJAG00000069812 ENSCJAG00000075197 ENSCJAG00000076215 ENSCJAG00000001070 ENSCJAG00000076671 Catarrhini ANCESTRAL SPECIES 12 ENSGT00940000154152.d.a.b ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00910000148115 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Hominoidea ANCESTRAL SPECIES 16 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00910000148115 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000167221 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Hominidae ANCESTRAL SPECIES 8 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00910000148115 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.pb #33 ENSGT00940000157313 #34 ENSGT00940000167221 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00910000148115 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.pb #33 ENSGT00940000157313 #34 ENSGT00940000167221 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Gorilla DUPLICATION Gorilla MODERN SPECIES 523 SYAP1 (ENSGGOG00000001309) TXLNG (ENSGGOG00000002388) ENSGGOG00000044025 REPS2 (ENSGGOG00000016013) #7 ENSGGOG00000022186 #8 NHS (ENSGGOG00000000704) #9 SCML1 (ENSGGOG00000003874) BEND2 (ENSGGOG00000003458) SCML2 (ENSGGOG00000015959) #13 CDKL5 (ENSGGOG00000010796) #15 RS1 (ENSGGOG00000023949) #17 PPEF1 (ENSGGOG00000003393) #18 PHKA2 (ENSGGOG00000003407) #19 ADGRG2 (ENSGGOG00000003424) #20 ENSGGOG00000040627 ENSGGOG00000013574 #22 MAP3K15 (ENSGGOG00000008317) #23 SH3KBP1 (ENSGGOG00000008333) #24 BCLAF3 (ENSGGOG00000009453) #25 MAP7D2 (ENSGGOG00000007760) #26 ENSGGOG00000012186 #27 RPS6KA3 (ENSGGOG00000008837) #28 CNKSR2 (ENSGGOG00000013768) #29 KLHL34 (ENSGGOG00000002780) #30 SMPX (ENSGGOG00000004353) #31 MBTPS2 (ENSGGOG00000012064) #32 ENSGGOG00000003123 #33 ENSGGOG00000003961 #34 CBLL2 (ENSGGOG00000034821) ENSGGOG00000026912 ENSGGOG00000036181 Gorilla MODERN SPECIES 122 ENSGGOG00000041347 #22 Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000167584 ENSGT00870000136506.pb #33 ENSGT00940000157313 #34 ENSGT00940000167221 ENSGT00940000157080 #36 Pan ANCESTRAL SPECIES 6 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00940000154152.d.a.b ENSGT00540000073670 #8 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000167584 ENSGT00870000136506.pb #33 ENSGT00940000157313 #34 ENSGT00940000166413 ENSGT00940000167221 Bonobo MODERN SPECIES 369 TXLNG (ENSPPAG00000034208) RBBP7 (ENSPPAG00000036647) REPS2 (ENSPPAG00000037795) #7 ENSPPAG00000031475 ENSPPAG00000004504 #8 NHS (ENSPPAG00000031794) #9 SCML1 (ENSPPAG00000031177) BEND2 (ENSPPAG00000032642) SCML2 (ENSPPAG00000039952) #13 CDKL5 (ENSPPAG00000027668) #15 RS1 (ENSPPAG00000040996) #17 PPEF1 (ENSPPAG00000027881) #18 ENSPPAG00000027509 PHKA2 (ENSPPAG00000036527) #19 ADGRG2 (ENSPPAG00000044060) #20 PDHA1 (ENSPPAG00000032993) #22 MAP3K15 (ENSPPAG00000039708) #23 SH3KBP1 (ENSPPAG00000037769) #24 BCLAF3 (ENSPPAG00000040123) #25 MAP7D2 (ENSPPAG00000040804) #26 EIF1AX (ENSPPAG00000033962) #27 RPS6KA3 (ENSPPAG00000029748) #28 CNKSR2 (ENSPPAG00000037182) #29 KLHL34 (ENSPPAG00000025617) #30 SMPX (ENSPPAG00000030194) #31 MBTPS2 (ENSPPAG00000033207) #32 YY2 (ENSPPAG00000033052) ENSPPAG00000035805 #33 PHEX (ENSPPAG00000012368) #34 CBLL2 (ENSPPAG00000006152) ENSPPAG00000031560 Chimpanzee MODERN SPECIES 972 TXLNG (ENSPTRG00000021701) RBBP7 (ENSPTRG00000021702) REPS2 (ENSPTRG00000021703) #7 ENSPTRG00000052150 ENSPTRG00000047191 #8 NHS (ENSPTRG00000021705) #9 SCML1 (ENSPTRG00000021706) BEND2 (ENSPTRG00000021708) SCML2 (ENSPTRG00000021710) #13 CDKL5 (ENSPTRG00000021711) #15 RS1 (ENSPTRG00000021713) #17 PPEF1 (ENSPTRG00000021714) #18 ENSPTRG00000046843 PHKA2 (ENSPTRG00000021715) #19 ADGRG2 (ENSPTRG00000021716) #20 PDHA1 (ENSPTRG00000021717) #22 MAP3K15 (ENSPTRG00000022605) #23 SH3KBP1 (ENSPTRG00000048773) #24 BCLAF3 (ENSPTRG00000021725) #25 MAP7D2 (ENSPTRG00000021727) #26 ENSPTRG00000021728 #27 RPS6KA3 (ENSPTRG00000052293) #28 CNKSR2 (ENSPTRG00000021731) #29 KLHL34 (ENSPTRG00000021733) #30 SMPX (ENSPTRG00000047975) #31 MBTPS2 (ENSPTRG00000021735) #32 ENSPTRG00000044028 #33 PHEX (ENSPTRG00000021737) #34 CBLL2 (ENSPTRG00000028314) ENSPTRG00000047608 DDX53 (ENSPTRG00000028313) Human MODERN SPECIES 1827 S100G (ENSG00000169906) SYAP1 (ENSG00000169895) TXLNG (ENSG00000086712) RBBP7 (ENSG00000102054) REPS2 (ENSG00000169891) #7 NHS (ENSG00000188158) #9 SCML1 (ENSG00000047634) RAI2 (ENSG00000131831) #11 BEND2 (ENSG00000177324) SCML2 (ENSG00000102098) #13 CDKL5 (ENSG00000008086) #15 RS1 (ENSG00000102104) #17 PPEF1 (ENSG00000086717) #18 PHKA2 (ENSG00000044446) #19 ADGRG2 (ENSG00000173698) #20 PDHA1 (ENSG00000131828) #22 MAP3K15 (ENSG00000180815) #23 SH3KBP1 (ENSG00000147010) #24 BCLAF3 (ENSG00000173681) #25 MAP7D2 (ENSG00000184368) #26 EIF1AX (ENSG00000173674) #27 RPS6KA3 (ENSG00000177189) #28 CNKSR2 (ENSG00000149970) #29 KLHL34 (ENSG00000185915) #30 SMPX (ENSG00000091482) #31 MBTPS2 (ENSG00000012174) #32 YY2 (ENSG00000230797) SMS (ENSG00000102172) #33 PHEX (ENSG00000102174) #34 CBLL2 (ENSG00000175809) DDX53 (ENSG00000184735) Orangutan MODERN SPECIES 242 TXLNG (ENSPPYG00000020157) RBBP7 (ENSPPYG00000020158) REPS2 (ENSPPYG00000020159) #7 ENSPPYG00000020160 #8 NHS (ENSPPYG00000020161) #9 SCML1 (ENSPPYG00000020162) RAI2 (ENSPPYG00000020163) #11 BEND2 (ENSPPYG00000020164) SCML2 (ENSPPYG00000020165) #13 CDKL5 (ENSPPYG00000020166) #15 RS1 (ENSPPYG00000020167) #17 PPEF1 (ENSPPYG00000020168) #18 ENSPPYG00000038507 PHKA2 (ENSPPYG00000020169) #19 ADGRG2 (ENSPPYG00000020170) #20 PDHA1 (ENSPPYG00000020171) #22 MAP3K15 (ENSPPYG00000020172) #23 SH3KBP1 (ENSPPYG00000020173) #24 BCLAF3 (ENSPPYG00000020174) #25 MAP7D2 (ENSPPYG00000020175) #26 EIF1AX (ENSPPYG00000038921) #27 RPS6KA3 (ENSPPYG00000020177) #28 CNKSR2 (ENSPPYG00000020178) #29 KLHL34 (ENSPPYG00000020179) #30 SMPX (ENSPPYG00000020180) #31 MBTPS2 (ENSPPYG00000020181) #32 SMS (ENSPPYG00000020182) #33 PHEX (ENSPPYG00000020183) #34 CBLL2 (ENSPPYG00000020184) ENSPPYG00000036724 DDX53 (ENSPPYG00000020185) Gibbon MODERN SPECIES 449 ENSNLEG00000032743 RBBP7 (ENSNLEG00000009557) REPS2 (ENSNLEG00000009591) #7 ENSNLEG00000029607 NHS (ENSNLEG00000009610) #9 SCML1 (ENSNLEG00000009621) BEND2 (ENSNLEG00000009644) SCML2 (ENSNLEG00000009648) #13 ENSNLEG00000027405 CDKL5 (ENSNLEG00000009674) #15 RS1 (ENSNLEG00000009691) #17 PPEF1 (ENSNLEG00000009696) #18 ENSNLEG00000029919 PHKA2 (ENSNLEG00000009732) #19 ADGRG2 (ENSNLEG00000009745) #20 PDHA1 (ENSNLEG00000009805) #22 MAP3K15 (ENSNLEG00000009849) #23 SH3KBP1 (ENSNLEG00000009860) #24 BCLAF3 (ENSNLEG00000009878) #25 ENSNLEG00000009882 MAP7D2 (ENSNLEG00000009884) #26 ENSNLEG00000009913 #27 RPS6KA3 (ENSNLEG00000009925) #28 CNKSR2 (ENSNLEG00000009933) #29 SMPX (ENSNLEG00000009938) #31 MBTPS2 (ENSNLEG00000009943) #32 SMS (ENSNLEG00000009955) #33 PHEX (ENSNLEG00000009980) #34 ENSNLEG00000018743 ENSNLEG00000027485 PTCHD1 (ENSNLEG00000010004) #36 Cercopithecidae ANCESTRAL SPECIES 27 ENSGT00940000154748.C ENSGT00940000154152.d.a.b ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00910000148115 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00940000154748.C ENSGT00940000154152.d.a.b ENSGT00940000158080 #7 ENSGT00940000154185.l.a.a.b ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Cercopithecinae_a DUPLICATION Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000154152.d.a.b ENSGT00940000158080 #7 ENSGT00940000154185.l.a.a.b ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.b.b.a.a.b.a.a.a.b.b.a.a.b.b.a.a.b.a.b.b.a ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.e #22 ENSGT00940000159562.e.a #23 ENSGT00940000159562.e.b #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Macaca ANCESTRAL SPECIES 29 ENSGT00940000154748.C.cb ENSGT00940000158080 #7 ENSGT00940000154185.l.a.a.b ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.b.b.a.a.b.a.a.a.b.b.a.a.b.b.a.a.b.a.b.b.a ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.e #22 ENSGT00940000159562.e.b #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Pig-tailed macaque MODERN SPECIES 549 SYAP1 (ENSMNEG00000038782) TXLNG (ENSMNEG00000040658) RBBP7 (ENSMNEG00000031240) REPS2 (ENSMNEG00000028017) #7 ENSMNEG00000022446 NHS (ENSMNEG00000032198) #9 SCML1 (ENSMNEG00000032587) BEND2 (ENSMNEG00000036925) SCML2 (ENSMNEG00000011431) #13 CDKL5 (ENSMNEG00000004730) #15 RS1 (ENSMNEG00000043209) #17 PPEF1 (ENSMNEG00000034590) #18 ENSMNEG00000028824 PHKA2 (ENSMNEG00000039386) #19 ADGRG2 (ENSMNEG00000043949) #20 ENSMNEG00000043035 #22 MAP3K15 (ENSMNEG00000029196) #23 SH3KBP1 (ENSMNEG00000037170) #24 ENSMNEG00000039258 BCLAF3 (ENSMNEG00000044107) #25 MAP7D2 (ENSMNEG00000042827) #26 EIF1AX (ENSMNEG00000035197) #27 RPS6KA3 (ENSMNEG00000013736) #28 CNKSR2 (ENSMNEG00000033243) #29 KLHL34 (ENSMNEG00000004752) #30 SMPX (ENSMNEG00000044214) #31 MBTPS2 (ENSMNEG00000018031) #32 ENSMNEG00000036966 SMS (ENSMNEG00000030826) #33 PHEX (ENSMNEG00000030561) #34 PTCHD1 (ENSMNEG00000031256) #36 Macaca_a ANCESTRAL SPECIES 11 ENSGT00940000154748.C.cb ENSGT00940000158080 #7 ENSGT00910000148084 ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.b.b.a.a.b.a.a.a.b.b.a.a.b.b.a.a.b.a.b.b.a ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000164688 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.e #22 ENSGT00940000159562.e.b #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000164709.a.b.b.a.b.b.b.a.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT01050000244986.b.b.d.a.b ENSGT00940000167221 Crab-eating macaque MODERN SPECIES 175 ENSMFAG00000045438 NHS (ENSMFAG00000033586) #9 ENSMFAG00000057357 ENSMFAG00000057834 SCML1 (ENSMFAG00000038986) RAI2 (ENSMFAG00000001310) #11 ENSMFAG00000065282 BEND2 (ENSMFAG00000036840) SCML2 (ENSMFAG00000042495) #13 CDKL5 (ENSMFAG00000030921) #15 RS1 (ENSMFAG00000003687) #17 PPEF1 (ENSMFAG00000032152) #18 ENSMFAG00000034482 PHKA2 (ENSMFAG00000044106) #19 ADGRG2 (ENSMFAG00000001073) #20 PDHA1 (ENSMFAG00000043170) #22 ENSMFAG00000058383 #23 ENSMFAG00000000869 #23 SH3KBP1 (ENSMFAG00000002962) #24 ENSMFAG00000021756 BCLAF3 (ENSMFAG00000003230) #25 MAP7D2 (ENSMFAG00000055804) #26 ENSMFAG00000060557 #27 RPS6KA3 (ENSMFAG00000045085) #28 ENSMFAG00000061291 ENSMFAG00000052941 CNKSR2 (ENSMFAG00000037951) #29 SMPX (ENSMFAG00000040826) #31 MBTPS2 (ENSMFAG00000042182) #32 SMS (ENSMFAG00000039117) #33 PHEX (ENSMFAG00000045722) #34 Rhesus MODERN SPECIES 327 TXLNG (ENSMMUG00000016237) RBBP7 (ENSMMUG00000016238) REPS2 (ENSMMUG00000010598) #7 ENSMMUG00000058988 NHS (ENSMMUG00000012894) #9 ENSMMUG00000060776 SCML1 (ENSMMUG00000012899) RAI2 (ENSMMUG00000001433) #11 BEND2 (ENSMMUG00000019969) SCML2 (ENSMMUG00000005084) #13 CDKL5 (ENSMMUG00000005063) #15 RS1 (ENSMMUG00000005065) #17 PPEF1 (ENSMMUG00000005066) #18 PHKA2 (ENSMMUG00000020513) #19 ADGRG2 (ENSMMUG00000020515) #20 PDHA1 (ENSMMUG00000017336) #22 MAP3K15 (ENSMMUG00000061236) #23 SH3KBP1 (ENSMMUG00000004744) #24 ENSMMUG00000010727 BCLAF3 (ENSMMUG00000004745) #25 MAP7D2 (ENSMMUG00000000192) #26 EIF1AX (ENSMMUG00000051148) #27 RPS6KA3 (ENSMMUG00000002134) #28 ENSMMUG00000063057 CNKSR2 (ENSMMUG00000007500) #29 KLHL34 (ENSMMUG00000007501) #30 SMPX (ENSMMUG00000057558) #31 YY2 (ENSMMUG00000022467) ENSMMUG00000051932 SMS (ENSMMUG00000020392) #33 PHEX (ENSMMUG00000023589) #34 Cercopithecinae_b ANCESTRAL SPECIES 35 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C.cb ENSGT00940000154152.d.a.b ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.e #22 ENSGT00940000159562.f #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00940000153558.b.i.b.a.a.b ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT01050000244986.b.b.d.a.b ENSGT00940000167221 Olive baboon MODERN SPECIES 792 ENSPANG00000046631 ENSPANG00000008870 ENSPANG00000050113 ENSPANG00000047189 NHS (ENSPANG00000007897) #9 SCML1 (ENSPANG00000010972) RAI2 (ENSPANG00000015463) #11 SCML2 (ENSPANG00000018991) #13 ENSPANG00000041187 CDKL5 (ENSPANG00000004460) #15 ENSPANG00000035243 PPEF1 (ENSPANG00000010228) #18 ENSPANG00000029606 PHKA2 (ENSPANG00000016122) #19 ADGRG2 (ENSPANG00000004239) #20 ENSPANG00000035301 #22 MAP3K15 (ENSPANG00000007384) #23 SH3KBP1 (ENSPANG00000006736) #24 BCLAF3 (ENSPANG00000004509) #25 MAP7D2 (ENSPANG00000019661) #26 EIF1AX (ENSPANG00000030224) #27 RPS6KA3 (ENSPANG00000016330) #28 ENSPANG00000006351 ENSPANG00000029508 CNKSR2 (ENSPANG00000011941) #29 KLHL34 (ENSPANG00000012353) #30 SMPX (ENSPANG00000005741) #31 ENSPANG00000050152 MBTPS2 (ENSPANG00000024280) #32 SMS (ENSPANG00000003155) #33 PHEX (ENSPANG00000010105) #34 Cercopithecinae_d ANCESTRAL SPECIES 51 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C.cb ENSGT00940000154152.d.a.b ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.e #22 ENSGT00940000159562.f #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00940000153558.b.i.b.a.a.b ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Sooty mangabey MODERN SPECIES 448 SYAP1 (ENSCATG00000044882) TXLNG (ENSCATG00000032410) RBBP7 (ENSCATG00000042741) ENSCATG00000037187 REPS2 (ENSCATG00000041359) #7 NHS (ENSCATG00000033217) #9 SCML1 (ENSCATG00000006222) BEND2 (ENSCATG00000036336) SCML2 (ENSCATG00000038994) #13 CDKL5 (ENSCATG00000041616) #15 RS1 (ENSCATG00000029796) #17 PPEF1 (ENSCATG00000043035) #18 ENSCATG00000037972 PHKA2 (ENSCATG00000044694) #19 ADGRG2 (ENSCATG00000035439) #20 PDHA1 (ENSCATG00000044567) #22 MAP3K15 (ENSCATG00000024304) #23 SH3KBP1 (ENSCATG00000034119) #24 BCLAF3 (ENSCATG00000039065) #25 MAP7D2 (ENSCATG00000042697) #26 EIF1AX (ENSCATG00000033237) #27 RPS6KA3 (ENSCATG00000036143) #28 ENSCATG00000035316 CNKSR2 (ENSCATG00000035326) #29 KLHL34 (ENSCATG00000014878) #30 SMPX (ENSCATG00000043293) #31 ENSCATG00000037334 MBTPS2 (ENSCATG00000031542) #32 SMS (ENSCATG00000032661) #33 PHEX (ENSCATG00000031574) #34 CBLL2 (ENSCATG00000014814) Drill MODERN SPECIES 1190 SCML2 (ENSMLEG00000007077) #13 CDKL5 (ENSMLEG00000038004) #15 RS1 (ENSMLEG00000024203) #17 PPEF1 (ENSMLEG00000035187) #18 ENSMLEG00000025963 PHKA2 (ENSMLEG00000029623) #19 ADGRG2 (ENSMLEG00000030833) #20 ENSMLEG00000033588 #22 MAP3K15 (ENSMLEG00000028673) #23 SH3KBP1 (ENSMLEG00000038375) #24 BCLAF3 (ENSMLEG00000016996) #25 MAP7D2 (ENSMLEG00000018058) #26 EIF1AX (ENSMLEG00000031392) #27 RPS6KA3 (ENSMLEG00000034063) #28 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00530000063174.a.i.f #22 Macaca ANCESTRAL SPECIES 17 ENSGT00940000154864.b ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a ENSGT00390000014001.a ENSGT00940000157837 ENSGT00940000157361 ENSGT00940000158042 ENSGT00390000005537 ENSGT00530000063174.a.i.f #22 ENSGT00910000147025 ENSGT00940000156983.a.a ENSGT01030000234579.A.b.w ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000018318.u.b.a.b.a.a.a ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 Pig-tailed macaque MODERN SPECIES 341 EML6 (ENSMNEG00000042682) RTN4 (ENSMNEG00000029510) CLHC1 (ENSMNEG00000027284) RPS27A (ENSMNEG00000037303) MTIF2 (ENSMNEG00000034768) ENSMNEG00000038538 CCDC88A (ENSMNEG00000038308) CFAP36 (ENSMNEG00000039806) PPP4R3B (ENSMNEG00000030876) PNPT1 (ENSMNEG00000038589) EFEMP1 (ENSMNEG00000043412) ENSMNEG00000004015 CCDC85A (ENSMNEG00000041770) VRK2 (ENSMNEG00000042551) FANCL (ENSMNEG00000028810) ENSMNEG00000044442 #22 BCL11A (ENSMNEG00000040327) ENSMNEG00000036604 ENSMNEG00000041584 PAPOLG (ENSMNEG00000035939) REL (ENSMNEG00000042843) PUS10 (ENSMNEG00000043877) PEX13 (ENSMNEG00000030840) SANBR (ENSMNEG00000041924) ENSMNEG00000033482 C2orf74 (ENSMNEG00000028498) ENSMNEG00000042228 ENSMNEG00000036948 ENSMNEG00000036676 USP34 (ENSMNEG00000039067) XPO1 (ENSMNEG00000030909) Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a ENSGT00390000014001.a.b ENSGT00940000157837 ENSGT00940000157361 ENSGT00950000182895.a.b.j.b.e.a ENSGT00940000158042 ENSGT00390000005537 ENSGT00530000063174.a.i.f #22 ENSGT00940000156983.a.a ENSGT01030000234579.A.b.w ENSGT00390000008802.m.a.a ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000155413.l.a.b ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 Cercopithecinae_d ANCESTRAL SPECIES 32 ENSGT00940000154864.b ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a ENSGT00390000014001.a.b ENSGT00940000157837 ENSGT00940000157361 ENSGT00940000158042 ENSGT00390000005537 ENSGT00530000063174.a.i.f #22 ENSGT00940000156983.a.a ENSGT01030000234579.A.b.w ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000155413.l.a.b ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.a Drill MODERN SPECIES 1245 VRK2 (ENSMLEG00000032178) FANCL (ENSMLEG00000031190) ENSMLEG00000038186 #22 BCL11A (ENSMLEG00000035855) ENSMLEG00000030509 PAPOLG (ENSMLEG00000039462) ENSMLEG00000035996 REL (ENSMLEG00000009298) ENSMLEG00000037480 Olive baboon MODERN SPECIES 5 RPS27A (ENSPANG00000034863) MTIF2 (ENSPANG00000014549) ENSPANG00000000623 CCDC88A (ENSPANG00000021274) PPP4R3B (ENSPANG00000022844) CFAP36 (ENSPANG00000022522) ENSPANG00000038384 ENSPANG00000031278 EFEMP1 (ENSPANG00000022521) ENSPANG00000041504 ENSPANG00000043733 CCDC85A (ENSPANG00000016914) ENSPANG00000010717 VRK2 (ENSPANG00000014544) FANCL (ENSPANG00000021497) ENSPANG00000021826 #22 BCL11A (ENSPANG00000018170) ENSPANG00000000672 PAPOLG (ENSPANG00000014543) REL (ENSPANG00000006148) PUS10 (ENSPANG00000018036) PEX13 (ENSPANG00000022181) ENSPANG00000017323 ENSPANG00000039323 C2orf74 (ENSPANG00000035894) ENSPANG00000016913 USP34 (ENSPANG00000025375) XPO1 (ENSPANG00000006892) FAM161A (ENSPANG00000010259) CCT4 (ENSPANG00000019105) COMMD1 (ENSPANG00000006093) Rhinopithecus ANCESTRAL SPECIES 500 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00910000148115 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b.c #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 Golden snub-nosed monkey MODERN SPECIES 2712 ADGRG2 (ENSRROG00000031914) #20 PDHA1 (ENSRROG00000021554) #22 MAP3K15 (ENSRROG00000040875) #23 ENSRROG00000038162 SH3KBP1 (ENSRROG00000034116) #24 BCLAF3 (ENSRROG00000036962) #25 Black snub-nosed monkey MODERN SPECIES 2277 PHKA2 (ENSRBIG00000038528) #19 ADGRG2 (ENSRBIG00000044766) #20 ENSRBIG00000040603 PDHA1 (ENSRBIG00000027799) #22 Tarsier MODERN SPECIES 1277 PDHA1 (ENSTSYG00000006218) #22 Strepsirrhini ANCESTRAL SPECIES 23 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066.b #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Bushbaby MODERN SPECIES 166 SYAP1 (ENSOGAG00000028403) TXLNG (ENSOGAG00000014991) RBBP7 (ENSOGAG00000014995) ENSOGAG00000000865 #7 NHS (ENSOGAG00000017089) #9 ENSOGAG00000017092 #10 RAI2 (ENSOGAG00000017095) #11 ENSOGAG00000012713 #12 SCML2 (ENSOGAG00000012455) #13 ENSOGAG00000031862 CDKL5 (ENSOGAG00000002429) #15 RS1 (ENSOGAG00000002430) #17 PPEF1 (ENSOGAG00000002431) #18 PHKA2 (ENSOGAG00000002436) #19 ADGRG2 (ENSOGAG00000011733) #20 PDHA1 (ENSOGAG00000002466) #22 MAP3K15 (ENSOGAG00000002467) #23 SH3KBP1 (ENSOGAG00000002469) #24 BCLAF3 (ENSOGAG00000008168) #25 MAP7D2 (ENSOGAG00000008176) #26 ENSOGAG00000033040 ENSOGAG00000008182 #27 RPS6KA3 (ENSOGAG00000008184) #28 ENSOGAG00000032783 CNKSR2 (ENSOGAG00000015464) #29 KLHL34 (ENSOGAG00000027270) #30 SMPX (ENSOGAG00000015469) #31 MBTPS2 (ENSOGAG00000011151) #32 ENSOGAG00000010892 #33 PHEX (ENSOGAG00000010894) #34 ENSOGAG00000026282 #35 Lemuriformes ANCESTRAL SPECIES 48 ENSGT00940000164194 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066.b #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Mouse lemur MODERN SPECIES 169 ENSMICG00000043954 CTPS2 (ENSMICG00000010839) S100G (ENSMICG00000034068) SYAP1 (ENSMICG00000000435) TXLNG (ENSMICG00000000438) RBBP7 (ENSMICG00000000440) REPS2 (ENSMICG00000003790) #7 NHS (ENSMICG00000036975) #9 ENSMICG00000027086 #10 SCML2 (ENSMICG00000027531) #13 CDKL5 (ENSMICG00000004179) #15 RS1 (ENSMICG00000004198) #17 PPEF1 (ENSMICG00000004203) #18 PHKA2 (ENSMICG00000004212) #19 ADGRG2 (ENSMICG00000004232) #20 PDHA1 (ENSMICG00000004067) #22 MAP3K15 (ENSMICG00000004080) #23 SH3KBP1 (ENSMICG00000004092) #24 BCLAF3 (ENSMICG00000004101) #25 MAP7D2 (ENSMICG00000004105) #26 EIF1AX (ENSMICG00000004110) #27 RPS6KA3 (ENSMICG00000004112) #28 CNKSR2 (ENSMICG00000002912) #29 KLHL34 (ENSMICG00000028251) #30 SMPX (ENSMICG00000008915) #31 ENSMICG00000044479 MBTPS2 (ENSMICG00000008917) #32 ENSMICG00000030382 ENSMICG00000037442 ENSMICG00000000192 #33 PHEX (ENSMICG00000000193) #34 Lemuriformes_a ANCESTRAL SPECIES 204 ENSGT00940000159407 #13 ENSGT00940000153528.a.b.a.b ENSGT01090000260070.A #16 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 505 ENSPCOG00000006194 ENSPCOG00000024633 #13 CDKL5 (ENSPCOG00000022705) #15 RS1 (ENSPCOG00000018582) #17 PPEF1 (ENSPCOG00000013904) #18 PHKA2 (ENSPCOG00000021054) #19 ADGRG2 (ENSPCOG00000022020) #20 ENSPCOG00000020305 #22 MAP3K15 (ENSPCOG00000005414) #23 SH3KBP1 (ENSPCOG00000019893) #24 BCLAF3 (ENSPCOG00000028321) #25 MAP7D2 (ENSPCOG00000012090) #26 ENSPCOG00000020014 #27 Coquerels sifaka MODERN SPECIES 274 PTX3 (ENSPCOG00000024857) CCNL1 (ENSPCOG00000015763) LEKR1 (ENSPCOG00000008154) TIPARP (ENSPCOG00000018471) SSR3 (ENSPCOG00000017371) KCNAB1 (ENSPCOG00000013343) GMPS (ENSPCOG00000024460) SLC33A1 (ENSPCOG00000021978) C3orf33 (ENSPCOG00000007724) PLCH1 (ENSPCOG00000028591) STRIT1 (ENSPCOG00000015379) MME (ENSPCOG00000013543) GPR149 (ENSPCOG00000027399) ENSPCOG00000011695 ARHGEF26 (ENSPCOG00000012536) ENSPCOG00000022566 #22 RAP2B (ENSPCOG00000009740) P2RY1 (ENSPCOG00000026439) MBNL1 (ENSPCOG00000023511) SUCNR1 (ENSPCOG00000019814) AADACL2 (ENSPCOG00000003911) IGSF10 (ENSPCOG00000018106) MED12L (ENSPCOG00000020951) P2RY12 (ENSPCOG00000011471) P2RY13 (ENSPCOG00000022030) GPR87 (ENSPCOG00000025356) CLRN1 (ENSPCOG00000005621) MINDY4B (ENSPCOG00000027685) SIAH2 (ENSPCOG00000013552) ERICH6 (ENSPCOG00000017914) SELENOT (ENSPCOG00000015742) Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 2504 ENSPSMG00000002787 #22 Greater bamboo lemur MODERN SPECIES 1438 ENSPSMG00000009753 #22 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Tree shrew MODERN SPECIES 1409 PDHA1 (ENSTBEG00000014313) #22 MAP3K15 (ENSTBEG00000015203) #23 SH3KBP1 (ENSTBEG00000015837) #24 Glires ANCESTRAL SPECIES 10 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Rodentia ANCESTRAL SPECIES 10 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Rodentia_B ANCESTRAL SPECIES 31 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Myomorpha ANCESTRAL SPECIES 6 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Muroidea ANCESTRAL SPECIES 30 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Cricetidae ANCESTRAL SPECIES 8 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C.p.b ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.a.a #27 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.cc.a #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Cricetinae ANCESTRAL SPECIES 17 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C.p.b ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.cc.a #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Chinese hamster chok1gshd MODERN SPECIES 230 Ctps2 (ENSCGRG00001020136) Syap1 (ENSCGRG00001017761) Txlng (ENSCGRG00001016480) ENSCGRG00001007647 Reps2 (ENSCGRG00001011156) #7 Nhs (ENSCGRG00001020344) #9 Rai2 (ENSCGRG00001015408) #11 ENSCGRG00001012613 #12 Scml2 (ENSCGRG00001017848) #13 Cdkl5 (ENSCGRG00001020755) #15 Rs1 (ENSCGRG00001017692) #17 Ppef1 (ENSCGRG00001015088) #18 Phka2 (ENSCGRG00001021729) #19 Adgrg2 (ENSCGRG00001022355) #20 ENSCGRG00001020861 Pdha1 (ENSCGRG00001020742) #22 Map3k15 (ENSCGRG00001017037) #23 Sh3kbp1 (ENSCGRG00001012962) #24 Bclaf3 (ENSCGRG00001017632) #25 Map7d2 (ENSCGRG00001005576) #26 ENSCGRG00001022852 #27 Rps6ka3 (ENSCGRG00001007518) #28 Cnksr2 (ENSCGRG00001022169) #29 Klhl34 (ENSCGRG00001014357) #30 Smpx (ENSCGRG00001020401) #31 MBTPS2 (ENSCGRG00001018020) #32 ENSCGRG00001000646 #33 Phex (ENSCGRG00001019759) #34 ENSCGRG00001015986 ENSCGRG00001015828 Ptchd1 (ENSCGRG00001010854) #36 Golden Hamster MODERN SPECIES 661 Ctps2 (ENSMAUG00000017364) S100g (ENSMAUG00000018622) Syap1 (ENSMAUG00000004105) Txlng (ENSMAUG00000016890) Rbbp7 (ENSMAUG00000008982) Reps2 (ENSMAUG00000017739) #7 Nhs (ENSMAUG00000016663) #9 Rai2 (ENSMAUG00000010443) #11 ENSMAUG00000014559 #12 Cdkl5 (ENSMAUG00000009424) #15 Gja6 (ENSMAUG00000016764) #16 Rs1 (ENSMAUG00000017955) #17 Ppef1 (ENSMAUG00000016981) #18 Phka2 (ENSMAUG00000001285) #19 Adgrg2 (ENSMAUG00000001544) #20 Pdha1 (ENSMAUG00000002413) #22 Map3k15 (ENSMAUG00000006183) #23 Sh3kbp1 (ENSMAUG00000017328) #24 ENSMAUG00000009356 Map7d2 (ENSMAUG00000016214) #26 ENSMAUG00000007856 ENSMAUG00000012396 #27 Rps6ka3 (ENSMAUG00000015390) #28 ENSMAUG00000017351 ENSMAUG00000008169 Cnksr2 (ENSMAUG00000021259) #29 Smpx (ENSMAUG00000016078) #31 Mbtps2 (ENSMAUG00000017121) #32 Yy2 (ENSMAUG00000016161) Sms (ENSMAUG00000017854) #33 Phex (ENSMAUG00000016421) #34 Cricetidae_B ANCESTRAL SPECIES 36 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C.p.b ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.a.a #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.cc.a #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Prairie vole MODERN SPECIES 360 Syap1 (ENSMOCG00000003662) ENSMOCG00000007235 Rbbp7 (ENSMOCG00000019533) Reps2 (ENSMOCG00000007173) #7 ENSMOCG00000001018 ENSMOCG00000006840 Nhs (ENSMOCG00000016164) #9 Rai2 (ENSMOCG00000020088) #11 Bend2 (ENSMOCG00000002447) #12 Scml2 (ENSMOCG00000004081) #13 Cdkl5 (ENSMOCG00000014110) #15 Rs1 (ENSMOCG00000012992) #17 Ppef1 (ENSMOCG00000019014) #18 Phka2 (ENSMOCG00000021208) #19 Adgrg2 (ENSMOCG00000011315) #20 Pdha1 (ENSMOCG00000002601) #22 Map3k15 (ENSMOCG00000013071) #23 Sh3kbp1 (ENSMOCG00000020425) #24 Bclaf3 (ENSMOCG00000005833) #25 Map7d2 (ENSMOCG00000019149) #26 ENSMOCG00000004138 ENSMOCG00000013551 #27 Rps6ka3 (ENSMOCG00000012164) #28 ENSMOCG00000016797 ENSMOCG00000017907 Cnksr2 (ENSMOCG00000000158) #29 Smpx (ENSMOCG00000009712) #31 Mbtps2 (ENSMOCG00000016533) #32 Yy2 (ENSMOCG00000013780) Sms (ENSMOCG00000016092) #33 Phex (ENSMOCG00000021326) #34 Northern American deer mouse MODERN SPECIES 475 Syap1 (ENSPEMG00000017603) Txlng (ENSPEMG00000000072) Rbbp7 (ENSPEMG00000000458) ENSPEMG00000031235 Reps2 (ENSPEMG00000006508) #7 Nhs (ENSPEMG00000017716) #9 Rai2 (ENSPEMG00000008659) #11 Bend2 (ENSPEMG00000011757) #12 ENSPEMG00000030730 #13 Cdkl5 (ENSPEMG00000002138) #15 Rs1 (ENSPEMG00000008058) #17 Ppef1 (ENSPEMG00000012697) #18 Phka2 (ENSPEMG00000004706) #19 Adgrg2 (ENSPEMG00000001110) #20 ENSPEMG00000026878 Pdha1 (ENSPEMG00000008945) #22 Map3k15 (ENSPEMG00000012858) #23 Sh3kbp1 (ENSPEMG00000007129) #24 Bclaf3 (ENSPEMG00000008136) #25 Map7d2 (ENSPEMG00000000311) #26 ENSPEMG00000026098 #27 Rps6ka3 (ENSPEMG00000018584) #28 ENSPEMG00000026965 Cnksr2 (ENSPEMG00000012770) #29 Klhl34 (ENSPEMG00000026377) #30 Smpx (ENSPEMG00000011852) #31 ENSPEMG00000026716 Mbtps2 (ENSPEMG00000012008) #32 Sms (ENSPEMG00000003756) #33 Phex (ENSPEMG00000017527) #34 Ptchd1 (ENSPEMG00000024561) #36 Murinae ANCESTRAL SPECIES 32 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Mus ANCESTRAL SPECIES 9 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00950000182987.c.a.a.o.b.h ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00860000136365 ENSGT00940000157080 #36 Mus_A ANCESTRAL SPECIES 15 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.a.a #27 ENSGT00940000159370 #28 ENSGT00950000182987.c.a.a.o.b.h ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00860000136365 ENSGT00940000157080 #36 Mus_B ANCESTRAL SPECIES 14 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00950000182987.c.a.a.o.b.h ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00860000136365 ENSGT00940000157080 #36 Mouse MODERN SPECIES 37 Ctps2 (ENSMUSG00000031360) Syap1 (ENSMUSG00000031357) Txlng (ENSMUSG00000038344) Rbbp7 (ENSMUSG00000031353) Reps2 (ENSMUSG00000040855) #7 Nhs (ENSMUSG00000059493) #9 Rai2 (ENSMUSG00000043518) #11 Bend2 (ENSMUSG00000108981) #12 Scml2 (ENSMUSG00000000037) #13 Gja6 (ENSMUSG00000055691) #16 Cdkl5 (ENSMUSG00000031292) #15 Rs1 (ENSMUSG00000031293) #17 Ppef1 (ENSMUSG00000062168) #18 Phka2 (ENSMUSG00000031295) #19 Adgrg2 (ENSMUSG00000031298) #20 Pdha1 (ENSMUSG00000031299) #22 Map3k15 (ENSMUSG00000031303) #23 Sh3kbp1 (ENSMUSG00000040990) #24 Bclaf3 (ENSMUSG00000044150) #25 Map7d2 (ENSMUSG00000041020) #26 Eif1ax (ENSMUSG00000067194) #27 Rps6ka3 (ENSMUSG00000031309) #28 Cnksr2 (ENSMUSG00000025658) #29 Klhl34 (ENSMUSG00000047485) #30 Smpx (ENSMUSG00000041476) #31 Yy2 (ENSMUSG00000091736) Mbtps2 (ENSMUSG00000046873) #32 Sms (ENSMUSG00000071708) #33 Phex (ENSMUSG00000057457) #34 Gm15155 (ENSMUSG00000055109) Ptchd1 (ENSMUSG00000041552) #36 Mus_C ANCESTRAL SPECIES 22 ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.a.a #27 ENSGT00940000159370 #28 ENSGT00950000182987.c.a.a.o.b.h ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00860000136365 ENSGT00940000157080 #36 Steppe mouse MODERN SPECIES 1826 ENSMSIG00000000851 #22 Map3k15 (ENSMSIG00000000871) #23 spretus MODERN SPECIES 19 S100g (MGP_SPRETEiJ_G0034721) Ctps2 (MGP_SPRETEiJ_G0034720) Syap1 (MGP_SPRETEiJ_G0034719) Txlng (MGP_SPRETEiJ_G0034718) Rbbp7 (MGP_SPRETEiJ_G0034717) Reps2 (MGP_SPRETEiJ_G0034716) #7 Nhs (MGP_SPRETEiJ_G0034715) #9 Rai2 (MGP_SPRETEiJ_G0034714) #11 MGP_SPRETEiJ_G0034713 #13 Gja6 (MGP_SPRETEiJ_G0034712) #16 Cdkl5 (MGP_SPRETEiJ_G0034711) #15 Rs1 (MGP_SPRETEiJ_G0034710) #17 Ppef1 (MGP_SPRETEiJ_G0034709) #18 Phka2 (MGP_SPRETEiJ_G0034708) #19 Adgrg2 (MGP_SPRETEiJ_G0034707) #20 Pdha1 (MGP_SPRETEiJ_G0034706) #22 Map3k15 (MGP_SPRETEiJ_G0034705) #23 Sh3kbp1 (MGP_SPRETEiJ_G0034704) #24 Bclaf3 (MGP_SPRETEiJ_G0034703) #25 Map7d2 (MGP_SPRETEiJ_G0034702) #26 MGP_SPRETEiJ_G0034701 #27 Rps6ka3 (MGP_SPRETEiJ_G0034700) #28 MGP_SPRETEiJ_G0034699 Cnksr2 (MGP_SPRETEiJ_G0034698) #29 Klhl34 (MGP_SPRETEiJ_G0034697) #30 Smpx (MGP_SPRETEiJ_G0034696) #31 Yy2 (MGP_SPRETEiJ_G0034695) Mbtps2 (MGP_SPRETEiJ_G0034694) #32 Sms (MGP_SPRETEiJ_G0034693) #33 Phex (MGP_SPRETEiJ_G0034692) #34 MGP_SPRETEiJ_G0034691 Ryukyu mouse MODERN SPECIES 19 S100g (MGP_CAROLIEiJ_G0033551) Ctps2 (MGP_CAROLIEiJ_G0033550) Syap1 (MGP_CAROLIEiJ_G0033549) Txlng (MGP_CAROLIEiJ_G0033548) Rbbp7 (MGP_CAROLIEiJ_G0033547) Reps2 (MGP_CAROLIEiJ_G0033546) #7 Nhs (MGP_CAROLIEiJ_G0033545) #9 Rai2 (MGP_CAROLIEiJ_G0033544) #11 MGP_CAROLIEiJ_G0033543 #13 Gja6 (MGP_CAROLIEiJ_G0033542) #16 Cdkl5 (MGP_CAROLIEiJ_G0033541) #15 Rs1 (MGP_CAROLIEiJ_G0033540) #17 Ppef1 (MGP_CAROLIEiJ_G0033539) #18 Phka2 (MGP_CAROLIEiJ_G0033538) #19 Adgrg2 (MGP_CAROLIEiJ_G0033537) #20 Pdha1 (MGP_CAROLIEiJ_G0033536) #22 Map3k15 (MGP_CAROLIEiJ_G0033535) #23 Sh3kbp1 (MGP_CAROLIEiJ_G0033534) #24 Bclaf3 (MGP_CAROLIEiJ_G0033533) #25 Map7d2 (MGP_CAROLIEiJ_G0033532) #26 MGP_CAROLIEiJ_G0033531 #27 Rps6ka3 (MGP_CAROLIEiJ_G0033530) #28 MGP_CAROLIEiJ_G0033529 Cnksr2 (MGP_CAROLIEiJ_G0033528) #29 Klhl34 (MGP_CAROLIEiJ_G0033527) #30 Smpx (MGP_CAROLIEiJ_G0033526) #31 Yy2 (MGP_CAROLIEiJ_G0033525) Mbtps2 (MGP_CAROLIEiJ_G0033524) #32 Sms (MGP_CAROLIEiJ_G0033523) #33 Phex (MGP_CAROLIEiJ_G0033522) #34 MGP_CAROLIEiJ_G0033521 Shrew mouse MODERN SPECIES 23 S100g (MGP_PahariEiJ_G0032090) Ctps2 (MGP_PahariEiJ_G0032089) Syap1 (MGP_PahariEiJ_G0032088) Txlng (MGP_PahariEiJ_G0032087) Rbbp7 (MGP_PahariEiJ_G0032086) Reps2 (MGP_PahariEiJ_G0032085) #7 Nhs (MGP_PahariEiJ_G0032084) #9 Rai2 (MGP_PahariEiJ_G0032083) #11 MGP_PahariEiJ_G0032082 #13 Gja6 (MGP_PahariEiJ_G0032081) #16 Cdkl5 (MGP_PahariEiJ_G0032080) #15 Rs1 (MGP_PahariEiJ_G0032079) #17 Ppef1 (MGP_PahariEiJ_G0032078) #18 Phka2 (MGP_PahariEiJ_G0032077) #19 Adgrg2 (MGP_PahariEiJ_G0032076) #20 Pdha1 (MGP_PahariEiJ_G0032075) #22 Map3k15 (MGP_PahariEiJ_G0032074) #23 Sh3kbp1 (MGP_PahariEiJ_G0032073) #24 Bclaf3 (MGP_PahariEiJ_G0032072) #25 Map7d2 (MGP_PahariEiJ_G0032071) #26 MGP_PahariEiJ_G0032070 #27 Rps6ka3 (MGP_PahariEiJ_G0032069) #28 MGP_PahariEiJ_G0032068 Cnksr2 (MGP_PahariEiJ_G0032067) #29 Klhl34 (MGP_PahariEiJ_G0032066) #30 Smpx (MGP_PahariEiJ_G0032065) #31 Yy2 (MGP_PahariEiJ_G0032064) Mbtps2 (MGP_PahariEiJ_G0032063) #32 Sms (MGP_PahariEiJ_G0032062) #33 Phex (MGP_PahariEiJ_G0032061) #34 MGP_PahariEiJ_G0032060 Rat DUPLICATION Rat MODERN SPECIES 7 Shcbp1 (ENSRNOG00000053026) ENSRNOG00000069339 ENSRNOG00000064130 ENSRNOG00000062801 Slc10a2 (ENSRNOG00000037753) Pdha1l1 (ENSRNOG00000014745) #22 Efnb2 (ENSRNOG00000064362) Arglu1 (ENSRNOG00000024142) Nalf1 (ENSRNOG00000066120) Lig4 (ENSRNOG00000014605) Abhd13 (ENSRNOG00000014598) AABR07026596.2 (ENSRNOG00000055140) Tnfsf13b (ENSRNOG00000014464) Myo16 (ENSRNOG00000016483) LOC689713 (ENSRNOG00000033703) ENSRNOG00000063036 Irs2 (ENSRNOG00000023509) Col4a1 (ENSRNOG00000016281) Col4a2 (ENSRNOG00000023972) Rab20 (ENSRNOG00000023991) Naxd (ENSRNOG00000015021) Rat MODERN SPECIES 46 Nhs (ENSRNOG00000030759) #9 Scml1 (ENSRNOG00000052694) #10 RGD1566197 (ENSRNOG00000032797) Rai2 (ENSRNOG00000006670) #11 Scml2 (ENSRNOG00000003726) #13 Cdkl5 (ENSRNOG00000003742) #15 Gja6 (ENSRNOG00000069341) #16 Rs1 (ENSRNOG00000030434) #17 ENSRNOG00000065877 Ppef1 (ENSRNOG00000027331) #18 AABR07037995.1 (ENSRNOG00000003949) #19 Adgrg2 (ENSRNOG00000032472) #20 Rps27a-ps5 (ENSRNOG00000032132) ENSRNOG00000069571 Lamtor1 (ENSRNOG00000004319) Pdha1 (ENSRNOG00000025383) #22 Map3k15 (ENSRNOG00000025290) #23 ENSRNOG00000066262 Sh3kbp1 (ENSRNOG00000004322) #24 Bclaf3 (ENSRNOG00000005135) #25 Map7d2 (ENSRNOG00000005176) #26 Eif1ax (ENSRNOG00000005736) #27 Rps6ka3 (ENSRNOG00000006632) #28 ENSRNOG00000062879 Cnksr2 (ENSRNOG00000007014) #29 Klhl34 (ENSRNOG00000024479) #30 Smpx (ENSRNOG00000007495) #31 ENSRNOG00000068938 Yy2 (ENSRNOG00000007644) #32 Sms (ENSRNOG00000007688) #33 Phex (ENSRNOG00000023440) #34 Upper Galilee mountains blind mole rat MODERN SPECIES 931 Cdkl5 (ENSNGAG00000010787) #15 Rs1 (ENSNGAG00000010391) #17 Ppef1 (ENSNGAG00000014571) #18 ENSNGAG00000017231 #19 Adgrg2 (ENSNGAG00000011202) #20 Pdha1 (ENSNGAG00000015013) #22 Map3k15 (ENSNGAG00000018804) #23 Sh3kbp1 (ENSNGAG00000021155) #24 Bclaf3 (ENSNGAG00000015524) #25 Map7d2 (ENSNGAG00000016712) #26 Eif1ax (ENSNGAG00000018551) #27 Rps6ka3 (ENSNGAG00000019940) #28 Cnksr2 (ENSNGAG00000009070) #29 Lesser Egyptian jerboa MODERN SPECIES 147 ENSJJAG00000018971 S100g (ENSJJAG00000018528) Ctps2 (ENSJJAG00000017649) Syap1 (ENSJJAG00000015936) ENSJJAG00000015727 Rbbp7 (ENSJJAG00000015390) Reps2 (ENSJJAG00000013946) #7 ENSJJAG00000012765 Nhs (ENSJJAG00000012415) #9 Rai2 (ENSJJAG00000011458) #11 Cdkl5 (ENSJJAG00000011323) #15 Rs1 (ENSJJAG00000000704) #17 Ppef1 (ENSJJAG00000000417) #18 ENSJJAG00000000145 #19 Adgrg2 (ENSJJAG00000016266) #20 Pdha1 (ENSJJAG00000013156) #22 Map3k15 (ENSJJAG00000012581) #23 Sh3kbp1 (ENSJJAG00000011003) #24 ENSJJAG00000009450 ENSJJAG00000008028 ENSJJAG00000007541 ENSJJAG00000006859 Tbl1x (ENSJJAG00000006406) ENSJJAG00000004898 ENSJJAG00000003177 Kangaroo rat MODERN SPECIES 413 ENSDORG00000011776 #18 ENSDORG00000026958 #19 Adgrg2 (ENSDORG00000003270) #20 Pdha1 (ENSDORG00000011848) #22 Map3k15 (ENSDORG00000011849) #23 Sh3kbp1 (ENSDORG00000005919) #24 Bclaf3 (ENSDORG00000007988) #25 Map7d2 (ENSDORG00000007990) #26 ENSDORG00000011536 #27 Rps6ka3 (ENSDORG00000011802) #28 ENSDORG00000029700 Cnksr2 (ENSDORG00000010230) #29 Smpx (ENSDORG00000003075) #31 Mbtps2 (ENSDORG00000011065) #32 Yy2 (ENSDORG00000011068) ENSDORG00000016069 #33 ENSDORG00000025753 Phex (ENSDORG00000010976) #34 Ptchd1 (ENSDORG00000004212) #36 Rodentia_A ANCESTRAL SPECIES 9 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Hystricomorpha ANCESTRAL SPECIES 11 ENSGT00940000155485 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Hystricomorpha_a ANCESTRAL SPECIES 60 ENSGT00530000064238 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000154763.mb ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 Hystricomorpha_b ANCESTRAL SPECIES 73 ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000154763.mb ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 Degu DUPLICATION Degu MODERN SPECIES 51 ENSODEG00000017773 #22 MAP3K15 (ENSODEG00000017836) #23 SH3KBP1 (ENSODEG00000017905) #24 BCLAF3 (ENSODEG00000018128) #25 ENSODEG00000017632 MAP7D2 (ENSODEG00000017740) #26 ENSODEG00000017687 #27 RPS6KA3 (ENSODEG00000017781) #28 C10orf82 (ENSODEG00000017640) HSPA12A (ENSODEG00000017751) ENO4 (ENSODEG00000017769) ENSODEG00000017934 ENSODEG00000017664 ENSODEG00000017629 VAX1 (ENSODEG00000017835) ENSODEG00000017686 Degu MODERN SPECIES 200 ENSODEG00000001487 ENSODEG00000001474 #22 ZDHHC13 (ENSODEG00000001434) CSRP3 (ENSODEG00000001395) E2F8 (ENSODEG00000001309) ENSODEG00000001265 NAV2 (ENSODEG00000001086) DBX1 (ENSODEG00000000930) HTATIP2 (ENSODEG00000000910) ENSODEG00000000894 PRMT3 (ENSODEG00000000824) SLC6A5 (ENSODEG00000000719) ENSODEG00000018648 NELL1 (ENSODEG00000000600) ENSODEG00000000998 ANO5 (ENSODEG00000000906) SLC17A6 (ENSODEG00000000829) Long-tailed chinchilla MODERN SPECIES 293 CDKL5 (ENSCLAG00000000414) #15 RS1 (ENSCLAG00000000386) #17 PPEF1 (ENSCLAG00000000360) #18 PHKA2 (ENSCLAG00000000312) #19 ADGRG2 (ENSCLAG00000000208) #20 PDHA1 (ENSCLAG00000000108) #22 MAP3K15 (ENSCLAG00000000098) #23 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 59 NHS (ENSCPOG00000020088) #9 ENSCPOG00000038636 #10 RAI2 (ENSCPOG00000015535) #11 CDKL5 (ENSCPOG00000007438) #15 RS1 (ENSCPOG00000007446) #17 PPEF1 (ENSCPOG00000006617) #18 PHKA2 (ENSCPOG00000011064) #19 ADGRG2 (ENSCPOG00000011079) #20 ENSCPOG00000009280 #22 MAP3K15 (ENSCPOG00000011102) #23 SH3KBP1 (ENSCPOG00000006433) #24 BCLAF3 (ENSCPOG00000008695) #25 MAP7D2 (ENSCPOG00000008706) #26 EIF1AX (ENSCPOG00000039205) #27 RPS6KA3 (ENSCPOG00000008719) #28 CNKSR2 (ENSCPOG00000009806) #29 KLHL34 (ENSCPOG00000035985) #30 SMPX (ENSCPOG00000033393) #31 MBTPS2 (ENSCPOG00000006171) #32 ENSCPOG00000006176 #33 PHEX (ENSCPOG00000006183) #34 ENSCPOG00000013960 #35 PTCHD1 (ENSCPOG00000035225) #36 PRDX4 (ENSCPOG00000004185) #37 Guinea pig MODERN SPECIES 49 ENSCPOG00000033799 ENSCPOG00000008532 ENSCPOG00000011552 ENSCPOG00000040037 CCNC (ENSCPOG00000011792) ENSCPOG00000032336 USP45 (ENSCPOG00000010267) PNISR (ENSCPOG00000033472) COQ3 (ENSCPOG00000005688) ENSCPOG00000026200 #22 FAXC (ENSCPOG00000005687) FBXL4 (ENSCPOG00000035819) POU3F2 (ENSCPOG00000003168) MMS22L (ENSCPOG00000039717) KLHL32 (ENSCPOG00000011948) NDUFAF4 (ENSCPOG00000031112) GPR63 (ENSCPOG00000005050) FHL5 (ENSCPOG00000002157) UFL1 (ENSCPOG00000006956) FUT9 (ENSCPOG00000003693) MANEA (ENSCPOG00000035608) EPHA7 (ENSCPOG00000003600) MAP3K7 (ENSCPOG00000008242) BACH2 (ENSCPOG00000030579) GJA10 (ENSCPOG00000009251) ##16 Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000036411 ENSHGLG00000001581 #29 KLHL34 (ENSHGLG00000020474) #30 ENSHGLG00000034421 SMPX (ENSHGLG00000050435) #31 ENSHGLG00000046622 MBTPS2 (ENSHGLG00000001714) #32 ENSHGLG00000001773 #33 PHEX (ENSHGLG00000003219) #34 ENSHGLG00000003413 #36 ENSHGLG00000033146 ENSHGLG00000020425 ENSHGLG00000000563 ENSHGLG00000050318 ENSHGLG00000044116 ENSHGLG00000000543 #22 ENSHGLG00000020000 ENSHGLG00000000584 #23 ENSHGLG00000000866 #24 ENSHGLG00000038256 BCLAF3 (ENSHGLG00000001058) #25 MAP7D2 (ENSHGLG00000001155) #26 ENSHGLG00000034312 #27 ENSHGLG00000001399 #28 ENSHGLG00000001460 ENSHGLG00000015862 #20 PHKA2 (ENSHGLG00000001760) #19 ENSHGLG00000001092 PPEF1 (ENSHGLG00000001185) #18 RS1 (ENSHGLG00000001057) #17 CDKL5 (ENSHGLG00000001743) #15 Sciuridae ANCESTRAL SPECIES 28 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164589 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Marmotini ANCESTRAL SPECIES 58 ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00940000153648.a.f ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 183 ENSMMMG00000004554 #22 ENSMMMG00000004548 ENSMMMG00000004540 Alpin marmot MODERN SPECIES 21 S100G (ENSMMMG00000005431) SYAP1 (ENSMMMG00000005440) TXLNG (ENSMMMG00000005463) RBBP7 (ENSMMMG00000005531) REPS2 (ENSMMMG00000005603) #7 NHS (ENSMMMG00000005679) #9 ENSMMMG00000006065 RAI2 (ENSMMMG00000006069) #11 SCML2 (ENSMMMG00000006071) #13 ENSMMMG00000006089 CDKL5 (ENSMMMG00000006110) #15 RS1 (ENSMMMG00000006144) #17 PPEF1 (ENSMMMG00000006165) #18 PHKA2 (ENSMMMG00000006185) #19 ADGRG2 (ENSMMMG00000006314) #20 ENSMMMG00000007196 #22 MAP3K15 (ENSMMMG00000007247) #23 SH3KBP1 (ENSMMMG00000007298) #24 ENSMMMG00000007426 BCLAF3 (ENSMMMG00000007465) #25 ENSMMMG00000007500 MAP7D2 (ENSMMMG00000007516) #26 EIF1AX (ENSMMMG00000007975) #27 RPS6KA3 (ENSMMMG00000008009) #28 CNKSR2 (ENSMMMG00000008093) #29 KLHL34 (ENSMMMG00000008160) #30 SMPX (ENSMMMG00000008177) #31 MBTPS2 (ENSMMMG00000008190) #32 ENSMMMG00000008211 ENSMMMG00000008215 SMS (ENSMMMG00000008225) #33 Marmotini_b ANCESTRAL SPECIES 69 ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00940000153648.a.f ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 Squirrel MODERN SPECIES 444 ENSSTOG00000013450 CDKL5 (ENSSTOG00000014545) #15 RS1 (ENSSTOG00000014568) #17 PPEF1 (ENSSTOG00000005660) #18 PHKA2 (ENSSTOG00000013911) #19 ADGRG2 (ENSSTOG00000013926) #20 PDHA1 (ENSSTOG00000015433) #22 MAP3K15 (ENSSTOG00000027298) #23 Arctic ground squirrel MODERN SPECIES 319 PHKA2 (ENSUPAG00010017499) #19 ADGRG2 (ENSUPAG00010016925) #20 ENSUPAG00010016903 PDHA1 (ENSUPAG00010016887) #22 MAP3K15 (ENSUPAG00010016860) #23 SH3KBP1 (ENSUPAG00010016531) #24 BCLAF3 (ENSUPAG00010016497) #25 ENSUPAG00010016489 MAP7D2 (ENSUPAG00010016279) #26 ENSUPAG00010016262 #27 RPS6KA3 (ENSUPAG00010016233) #28 Eurasian red squirrel MODERN SPECIES 156 RBBP7 (ENSSVLG00005025916) REPS2 (ENSSVLG00005025910) #7 ENSSVLG00005025908 ENSSVLG00005025906 NHS (ENSSVLG00005025902) #9 ENSSVLG00005025897 RAI2 (ENSSVLG00005025894) #11 ENSSVLG00005025889 SCML2 (ENSSVLG00005025874) #13 CDKL5 (ENSSVLG00005025859) #15 RS1 (ENSSVLG00005025848) #17 PPEF1 (ENSSVLG00005025839) #18 PHKA2 (ENSSVLG00005025821) #19 ADGRG2 (ENSSVLG00005025609) #20 ENSSVLG00005025413 PDHA1 (ENSSVLG00005025396) #22 MAP3K15 (ENSSVLG00005025353) #23 SH3KBP1 (ENSSVLG00005025277) #24 BCLAF3 (ENSSVLG00005025243) #25 ENSSVLG00005025223 ENSSVLG00005025208 MAP7D2 (ENSSVLG00005025072) #26 ENSSVLG00005024989 #27 RPS6KA3 (ENSSVLG00005024949) #28 CNKSR2 (ENSSVLG00005023957) #29 KLHL34 (ENSSVLG00005023744) #30 SMPX (ENSSVLG00005023721) #31 MBTPS2 (ENSSVLG00005023689) #32 ENSSVLG00005023659 ENSSVLG00005023650 SMS (ENSSVLG00005023626) #33 Lagomorpha ANCESTRAL SPECIES 49 ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00950000185291 ENSGT00940000153430.a.a #37 Rabbit MODERN SPECIES 1401 ENSOCUG00000000681 ENSOCUG00000000683 REPS2 (ENSOCUG00000014665) #7 ENSOCUG00000031876 NHS (ENSOCUG00000013436) #9 ENSOCUG00000028121 ENSOCUG00000021853 #10 RAI2 (ENSOCUG00000026517) #11 ENSOCUG00000013622 #12 SCML2 (ENSOCUG00000007351) #13 CDKL5 (ENSOCUG00000010775) #15 RS1 (ENSOCUG00000010796) #17 PHKA2 (ENSOCUG00000013782) #19 PPEF1 (ENSOCUG00000010801) #18 ADGRG2 (ENSOCUG00000007324) #20 PDHA1 (ENSOCUG00000014748) #22 MAP3K15 (ENSOCUG00000014758) #23 SH3KBP1 (ENSOCUG00000006268) #24 BCLAF3 (ENSOCUG00000015294) #25 MAP7D2 (ENSOCUG00000016736) #26 RPS6KA3 (ENSOCUG00000025948) #28 ENSOCUG00000027568 CNKSR2 (ENSOCUG00000014660) #29 KLHL34 (ENSOCUG00000014678) #30 SMPX (ENSOCUG00000001849) #31 MBTPS2 (ENSOCUG00000016386) #32 SMS (ENSOCUG00000006016) #33 PHEX (ENSOCUG00000006020) #34 ENSOCUG00000004437 #35 PTCHD1 (ENSOCUG00000014375) #36 ENSOCUG00000032925 Pika MODERN SPECIES 1123 PDHA1 (ENSOPRG00000016091) #22 Atlantogenata ANCESTRAL SPECIES 50 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Xenarthra ANCESTRAL SPECIES 165 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Armadillo MODERN SPECIES 729 SCML2 (ENSDNOG00000002390) #13 CDKL5 (ENSDNOG00000002494) #15 ENSDNOG00000041458 RS1 (ENSDNOG00000002498) #17 PPEF1 (ENSDNOG00000031966) #18 PHKA2 (ENSDNOG00000012404) #19 ADGRG2 (ENSDNOG00000012455) #20 PDHA1 (ENSDNOG00000008462) #22 MAP3K15 (ENSDNOG00000007828) #23 SH3KBP1 (ENSDNOG00000016477) #24 BCLAF3 (ENSDNOG00000045492) #25 MAP7D2 (ENSDNOG00000017855) #26 EIF1AX (ENSDNOG00000045675) #27 RPS6KA3 (ENSDNOG00000003310) #28 ENSDNOG00000031647 CNKSR2 (ENSDNOG00000000614) #29 KLHL34 (ENSDNOG00000033922) #30 SMPX (ENSDNOG00000016757) #31 MBTPS2 (ENSDNOG00000033022) #32 SMS (ENSDNOG00000006712) #33 PHEX (ENSDNOG00000002993) #34 ENSDNOG00000041572 ENSDNOG00000032914 Sloth MODERN SPECIES 2471 ENSCHOG00000006341 #22 Afrotheria ANCESTRAL SPECIES 66 ENSGT01100000263512.b.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Afrotheria_a ANCESTRAL SPECIES 64 ENSGT01100000263512.b.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000164165 #10 ENSGT00940000154164.d #11 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 #35 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Hyrax MODERN SPECIES 2266 PDHA1 (ENSPCAG00000004196) #22 ENSPCAG00000004266 #23 Elephant MODERN SPECIES 369 TXLNG (ENSLAFG00000013552) RBBP7 (ENSLAFG00000013554) REPS2 (ENSLAFG00000012599) #7 NHS (ENSLAFG00000017062) #9 ENSLAFG00000017074 #10 RAI2 (ENSLAFG00000014793) #11 ENSLAFG00000011802 #12 ENSLAFG00000011808 ENSLAFG00000027704 #13 CDKL5 (ENSLAFG00000009417) #15 RS1 (ENSLAFG00000009423) #17 ENSLAFG00000009424 #18 PHKA2 (ENSLAFG00000009425) #19 ADGRG2 (ENSLAFG00000009428) #20 ENSLAFG00000026076 PDHA1 (ENSLAFG00000009426) #22 MAP3K15 (ENSLAFG00000009429) #23 SH3KBP1 (ENSLAFG00000009756) #24 BCLAF3 (ENSLAFG00000008518) #25 MAP7D2 (ENSLAFG00000023306) #26 EIF1AX (ENSLAFG00000007016) #27 RPS6KA3 (ENSLAFG00000007020) #28 CNKSR2 (ENSLAFG00000007401) #29 KLHL34 (ENSLAFG00000007404) #30 SMPX (ENSLAFG00000001873) #31 MBTPS2 (ENSLAFG00000017242) #32 SMS (ENSLAFG00000003543) #33 PHEX (ENSLAFG00000010566) #34 ENSLAFG00000010569 ENSLAFG00000011531 #35 PTCHD1 (ENSLAFG00000022742) #36 Tenrec MODERN SPECIES 2784 PDHA1 (ENSETEG00000001392) #22 Eutheria ANCESTRAL SPECIES 2 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000164379 ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 ENSGT00390000013159 ENSGT00940000157887 ENSGT00900000140979.a.a.`b.b Boreoeutheria ANCESTRAL SPECIES 8 ENSGT00950000183033.a.b.a ENSGT00950000183033.a.a.c.b ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Laurasiatheria ANCESTRAL SPECIES 11 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Laurasiatheria_a ANCESTRAL SPECIES 8 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Artiodactyla ANCESTRAL SPECIES 12 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Artiodactyla_a ANCESTRAL SPECIES 12 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Artiodactyla_b ANCESTRAL SPECIES 16 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Pecora ANCESTRAL SPECIES 15 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000018596.B.b ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Yarkand deer MODERN SPECIES 8 ENSCHYG00000014006 FAM13A (ENSCHYG00000013408) TIGD2 (ENSCHYG00000013300) GPRIN3 (ENSCHYG00000013257) ENSCHYG00000013224 SNCA (ENSCHYG00000013101) MMRN1 (ENSCHYG00000013009) CCSER1 (ENSCHYG00000012836) GRID2 (ENSCHYG00000012507) ATOH1 (ENSCHYG00000012447) SMARCAD1 (ENSCHYG00000012370) HPGDS (ENSCHYG00000012305) PDLIM5 (ENSCHYG00000011689) BMPR1B (ENSCHYG00000011513) UNC5C (ENSCHYG00000011195) PDHA2 (ENSCHYG00000011151) ##22 ENSCHYG00000011128 STPG2 (ENSCHYG00000011023) RAP1GDS1 (ENSCHYG00000009459) TSPAN5 (ENSCHYG00000009162) ENSCHYG00000009101 ENSCHYG00000009081 ENSCHYG00000009041 ENSCHYG00000008899 METAP1 (ENSCHYG00000008757) ENSCHYG00000008689 ADH4 (ENSCHYG00000008600) ADH6 (ENSCHYG00000008516) ENSCHYG00000008471 ENSCHYG00000008395 C4orf17 (ENSCHYG00000008205) Percora_a ANCESTRAL SPECIES 18 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000018596.B.b ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Bovidae ANCESTRAL SPECIES 18 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000018596.B.b ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00950000183183.b.a.q.a.c.b ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00390000016927.i.a.a.b ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 Bovinae ANCESTRAL SPECIES 15 ENSGT00730000111564 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00940000161841.i.b.a ENSGT00390000018596.B.b ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00950000183183.b.a.q.a.c.b ENSGT00940000154194 ENSGT00950000182891.a.a.b.a.b.a.m.a.b ENSGT00940000158205 ENSGT00940000155196 ENSGT00960000190398 ENSGT00940000162645 ENSGT00390000016927.i.a.a.b ENSGT00940000163645 ENSGT00940000162845 Bos ANCESTRAL SPECIES 15 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00940000161841.i.b.a ENSGT00390000018596.B.b ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000153362.a.cb.a.a.a ENSGT00950000183183.b.a.q.a.c.b.b ENSGT00940000154194 ENSGT00950000182891.a.a.b.a.b.a.m.a.b ENSGT00940000158205 ENSGT00940000155196 ENSGT00960000190398 ENSGT00940000162645 ENSGT00390000016927.i.a.a.b ENSGT00940000163645 Bos_b ANCESTRAL SPECIES 14 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.b.b.b.b.a.b.a.a.b.a.a.a ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00940000161841.i.b.a ENSGT00390000018596.B.b ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000153362.a.cb.a.a.a ENSGT00950000183183.b.a.q.a.c.b.a ENSGT00940000154194 ENSGT00950000182891.a.a.b.a.b.a.m.a.b ENSGT00940000158205 ENSGT00940000155196 ENSGT00960000190398 ENSGT00940000162645 ENSGT00390000016927.i.a.a.b ENSGT00940000163645 Hybrid Bos Indicus MODERN SPECIES 25 MMRN1 (ENSBIXG00005002999) ENSBIXG00005003008 ENSBIXG00005018562 ENSBIXG00005018606 CCSER1 (ENSBIXG00005018668) GRID2 (ENSBIXG00005018931) ATOH1 (ENSBIXG00005019073) SMARCAD1 (ENSBIXG00005019129) HPGDS (ENSBIXG00005019143) PDLIM5 (ENSBIXG00005019427) ENSBIXG00005019501 ENSBIXG00005019512 BMPR1B (ENSBIXG00005019716) ENSBIXG00005005526 UNC5C (ENSBIXG00005019951) PDHA2 (ENSBIXG00005006818) ##22 ENSBIXG00005020010 ENSBIXG00005020038 ENSBIXG00005003297 STPG2 (ENSBIXG00005020087) RAP1GDS1 (ENSBIXG00005020210) ENSBIXG00005003369 TSPAN5 (ENSBIXG00005020262) ENSBIXG00005020276 EIF4E (ENSBIXG00005020322) ENSBIXG00005005594 ADH5 (ENSBIXG00005020398) ENSBIXG00005020447 ADH6 (ENSBIXG00005020520) METAP1 (ENSBIXG00005020582) ENSBIXG00005003522 Cow MODERN SPECIES 25 TIGD2 (ENSBTAG00000015265) GPRIN3 (ENSBTAG00000045966) SNCA (ENSBTAG00000024957) MMRN1 (ENSBTAG00000010285) ENSBTAG00000045523 CCSER1 (ENSBTAG00000019808) ENSBTAG00000053441 GRID2 (ENSBTAG00000046413) ATOH1 (ENSBTAG00000002895) SMARCAD1 (ENSBTAG00000017061) HPGDS (ENSBTAG00000017073) PDLIM5 (ENSBTAG00000012818) BMPR1B (ENSBTAG00000002081) ENSBTAG00000050287 UNC5C (ENSBTAG00000002084) PDHA2 (ENSBTAG00000026250) ##22 ENSBTAG00000015464 ENSBTAG00000023000 STPG2 (ENSBTAG00000049465) RAP1GDS1 (ENSBTAG00000007522) TSPAN5 (ENSBTAG00000012343) ENSBTAG00000024578 EIF4E (ENSBTAG00000009522) ENSBTAG00000024125 METAP1 (ENSBTAG00000016004) ADH5 (ENSBTAG00000016007) ENSBTAG00000055127 ADH4 (ENSBTAG00000034139) ENSBTAG00000052318 ADH6 (ENSBTAG00000006991) ADH6 (ENSBTAG00000006986) Bos_a ANCESTRAL SPECIES 33 ENSGT00390000015889.o.b ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.a.a.a.a.b.b ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00940000161841.i.b.a ENSGT00390000018596.B.b ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000153362.a.cb.a.a.a ENSGT00950000183183.b.a.q.a.c.b.b ENSGT00940000154194 ENSGT00950000182891.a.a.b.a.b.a.m.a.b ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 Domestic yak MODERN SPECIES 25 MMRN1 (ENSBGRG00000022987) CCSER1 (ENSBGRG00000023090) ENSBGRG00000023437 ENSBGRG00000023458 ENSBGRG00000023469 ENSBGRG00000023475 GRID2 (ENSBGRG00000023510) ATOH1 (ENSBGRG00000023717) SMARCAD1 (ENSBGRG00000023737) HPGDS (ENSBGRG00000000303) PDLIM5 (ENSBGRG00000000397) ENSBGRG00000000612 ENSBGRG00000000618 BMPR1B (ENSBGRG00000000658) UNC5C (ENSBGRG00000000763) PDHA2 (ENSBGRG00000000876) ##22 ENSBGRG00000000891 STPG2 (ENSBGRG00000000913) ENSBGRG00000000988 RAP1GDS1 (ENSBGRG00000001075) TSPAN5 (ENSBGRG00000001483) ENSBGRG00000001534 ENSBGRG00000001557 EIF4E (ENSBGRG00000001581) ENSBGRG00000001626 METAP1 (ENSBGRG00000001645) ADH5 (ENSBGRG00000001695) ADH4 (ENSBGRG00000001793) ADH6 (ENSBGRG00000001847) ENSBGRG00000001962 ENSBGRG00000001971 Wild yak MODERN SPECIES 518 PDHA2 (ENSBMUG00000013257) ##22 ENSBMUG00000013289 ENSBMUG00000013303 American bison MODERN SPECIES 3179 SMARCAD1 (ENSBBBG00000021403) HPGDS (ENSBBBG00000005710) PDLIM5 (ENSBBBG00000021614) ENSBBBG00000021647 BMPR1B (ENSBBBG00000021707) UNC5C (ENSBBBG00000021798) PDHA2 (ENSBBBG00000021816) ##22 ENSBBBG00000021827 ENSBBBG00000021839 ENSBBBG00000021848 RAP1GDS1 (ENSBBBG00000022062) TSPAN5 (ENSBBBG00000005833) ENSBBBG00000022107 ENSBBBG00000022115 EIF4E (ENSBBBG00000005843) ENSBBBG00000022134 METAP1 (ENSBBBG00000022151) ADH5 (ENSBBBG00000022169) ENSBBBG00000022176 ADH4 (ENSBBBG00000022206) ENSBBBG00000022216 ADH6 (ENSBBBG00000007283) Caprinae ANCESTRAL SPECIES 13 ENSGT00950000183033.a.b.a ENSGT00950000183033.a.a.c.b ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000018596.B.b ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00950000183183.b.a.q.a.c.b ENSGT00940000154194 ENSGT00950000182891.a.a.b.a.b.b.b.d.a ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645.b ENSGT00390000016927.i.a.a.b.a ENSGT00940000163645 ENSGT00940000162645.a ENSGT00390000016927.i.a.a.b.b ENSGT00940000162845 Goat MODERN SPECIES 25 TIGD2 (ENSCHIG00000008747) GPRIN3 (ENSCHIG00000008090) SNCA (ENSCHIG00000012331) ENSCHIG00000013599 MMRN1 (ENSCHIG00000022636) CCSER1 (ENSCHIG00000019553) ENSCHIG00000000698 GRID2 (ENSCHIG00000020528) ATOH1 (ENSCHIG00000011106) ENSCHIG00000014271 SMARCAD1 (ENSCHIG00000012905) HPGDS (ENSCHIG00000022190) PDLIM5 (ENSCHIG00000008891) BMPR1B (ENSCHIG00000017761) UNC5C (ENSCHIG00000007694) PDHA2 (ENSCHIG00000008223) ##22 ENSCHIG00000013187 STPG2 (ENSCHIG00000014643) RAP1GDS1 (ENSCHIG00000013239) TSPAN5 (ENSCHIG00000022359) ENSCHIG00000016049 EIF4E (ENSCHIG00000009550) ENSCHIG00000009913 METAP1 (ENSCHIG00000022024) ADH5 (ENSCHIG00000025518) ENSCHIG00000025317 ENSCHIG00000025086 ENSCHIG00000024279 ENSCHIG00000012239 ENSCHIG00000025566 ENSCHIG00000020284 Rambouillet Sheep MODERN SPECIES 22 ENSOARG00020023436 FAM13A (ENSOARG00020022316) LYPLA1 (ENSOARG00020022220) TIGD2 (ENSOARG00020022196) SNCA (ENSOARG00020022002) MMRN1 (ENSOARG00020021960) CCSER1 (ENSOARG00020021891) GRID2 (ENSOARG00020021077) ATOH1 (ENSOARG00020021038) ENSOARG00020021032 SMARCAD1 (ENSOARG00020020813) HPGDS (ENSOARG00020020743) PDLIM5 (ENSOARG00020020424) BMPR1B (ENSOARG00020020206) UNC5C (ENSOARG00020019727) PDHA2 (ENSOARG00020019674) ##22 ENSOARG00020019656 STPG2 (ENSOARG00020019402) RAP1GDS1 (ENSOARG00020016868) TSPAN5 (ENSOARG00020016727) EIF4E (ENSOARG00020016553) ENSOARG00020016539 METAP1 (ENSOARG00020016389) ADH5 (ENSOARG00020016239) ENSOARG00020016196 ADH4 (ENSOARG00020015568) ENSOARG00020015516 ENSOARG00020015355 ENSOARG00020014854 ENSOARG00020014759 ENSOARG00020014505 Siberian musk deer MODERN SPECIES 1270 SNCA (ENSMMSG00000018719) MMRN1 (ENSMMSG00000018808) CCSER1 (ENSMMSG00000018844) ENSMMSG00000018880 ENSMMSG00000018932 ENSMMSG00000018944 GRID2 (ENSMMSG00000019011) ATOH1 (ENSMMSG00000019342) ENSMMSG00000019354 SMARCAD1 (ENSMMSG00000019370) HPGDS (ENSMMSG00000019536) PDLIM5 (ENSMMSG00000019568) ENSMMSG00000019741 BMPR1B (ENSMMSG00000019768) UNC5C (ENSMMSG00000019855) PDHA2 (ENSMMSG00000020176) ##22 STPG2 (ENSMMSG00000020189) RAP1GDS1 (ENSMMSG00000020312) TSPAN5 (ENSMMSG00000021109) ENSMMSG00000021164 METAP1 (ENSMMSG00000021278) ADH5 (ENSMMSG00000021316) Cetacea ANCESTRAL SPECIES 12 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 Odontoceti ANCESTRAL SPECIES 11 ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00390000017443.m.a ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000160756.c.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.n.b ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 Odontoceti_a ANCESTRAL SPECIES 26 ENSGT00950000183033.a.b.a ENSGT00570000079168.b.b.b ENSGT00390000017443.m.a ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000160756.c.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.n.b ENSGT00940000162645 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 ENSGT00390000013159 ENSGT00940000157887 Odontoceti_b ANCESTRAL SPECIES 11 ENSGT00570000079168.b.b.b ENSGT00390000017443.m.a ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000160756.c.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000156773.n ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.n.b ENSGT00940000162645 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 ENSGT00390000013159 ENSGT00940000157887 Monodontidae ANCESTRAL SPECIES 9 ENSGT00390000017443.m.a ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000160756.c.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000154152.d.a.a.e ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000156773.n ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.lb ENSGT00940000158205 ENSGT00940000155196.n.b ENSGT00940000155234.b ENSGT00940000162708 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 ENSGT00390000013159 ENSGT00940000157887 ENSGT00900000140979.a.a.`b.b Beluga whale MODERN SPECIES 13 GPRIN3 (ENSDLEG00000000510) ENSDLEG00000000521 SNCA (ENSDLEG00000000538) MMRN1 (ENSDLEG00000000553) ENSDLEG00000000577 CCSER1 (ENSDLEG00000000608) ENSDLEG00000000650 GRID2 (ENSDLEG00000000678) ENSDLEG00000000719 ATOH1 (ENSDLEG00000000728) SMARCAD1 (ENSDLEG00000000742) HPGDS (ENSDLEG00000000785) PDLIM5 (ENSDLEG00000000807) BMPR1B (ENSDLEG00000000839) UNC5C (ENSDLEG00000000896) ENSDLEG00000000932 ##22 ENSDLEG00000000945 STPG2 (ENSDLEG00000000965) RAP1GDS1 (ENSDLEG00000001000) TSPAN5 (ENSDLEG00000001033) ENSDLEG00000001061 METAP1 (ENSDLEG00000001082) ENSDLEG00000001104 ADH1C (ENSDLEG00000001132) ADH7 (ENSDLEG00000001160) TRMT10A (ENSDLEG00000001199) MTTP (ENSDLEG00000001222) C4orf54 (ENSDLEG00000001252) DAPP1 (ENSDLEG00000001262) LAMTOR3 (ENSDLEG00000001284) DNAJB14 (ENSDLEG00000001308) Narwhal MODERN SPECIES 307 GPRIN3 (ENSMMNG00015011061) ENSMMNG00015011065 SNCA (ENSMMNG00015011091) MMRN1 (ENSMMNG00015011136) ENSMMNG00015011167 CCSER1 (ENSMMNG00015011215) GRID2 (ENSMMNG00015011268) ENSMMNG00015011351 ATOH1 (ENSMMNG00015011356) SMARCAD1 (ENSMMNG00015011369) HPGDS (ENSMMNG00015011400) ENSMMNG00015011412 PDLIM5 (ENSMMNG00015011438) BMPR1B (ENSMMNG00015011501) UNC5C (ENSMMNG00015011568) ENSMMNG00015011637 ##22 ENSMMNG00015011656 STPG2 (ENSMMNG00015011683) ENSMMNG00015011702 RAP1GDS1 (ENSMMNG00015011760) TSPAN5 (ENSMMNG00015011871) ENSMMNG00015011905 METAP1 (ENSMMNG00015011937) ENSMMNG00015011959 ENSMMNG00015012001 ADH7 (ENSMMNG00015012075) TRMT10A (ENSMMNG00015012194) MTTP (ENSMMNG00015012217) C4orf54 (ENSMMNG00015012235) DAPP1 (ENSMMNG00015012254) LAMTOR3 (ENSMMNG00015012285) Camelidae ANCESTRAL SPECIES 20 ENSGT00950000183175.B.b.e ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Arabian camel MODERN SPECIES 11 ENSCDRG00005010793 ENSCDRG00005010708 ENSCDRG00005010544 MMRN1 (ENSCDRG00005010505) CCSER1 (ENSCDRG00005010415) ENSCDRG00005010381 GRID2 (ENSCDRG00005009950) ENSCDRG00005009873 ATOH1 (ENSCDRG00005009854) SMARCAD1 (ENSCDRG00005009588) HPGDS (ENSCDRG00005009472) PDLIM5 (ENSCDRG00005008970) BMPR1B (ENSCDRG00005008805) ENSCDRG00005008779 UNC5C (ENSCDRG00005008588) PDHA2 (ENSCDRG00005008550) ##22 ENSCDRG00005008544 STPG2 (ENSCDRG00005008261) RAP1GDS1 (ENSCDRG00005006817) TSPAN5 (ENSCDRG00005006719) ENSCDRG00005006550 METAP1 (ENSCDRG00005006507) ADH5 (ENSCDRG00005006442) ADH4 (ENSCDRG00005006348) ADH6 (ENSCDRG00005006293) ENSCDRG00005018374 ENSCDRG00005018280 ENSCDRG00005018187 C4orf17 (ENSCDRG00005018162) TRMT10A (ENSCDRG00005018130) MTTP (ENSCDRG00005018066) Alpaca MODERN SPECIES 4070 PDHA2 (ENSVPAG00000007756) ##22 Laurasiatheria_b ANCESTRAL SPECIES 8 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645.d ENSGT00940000163645.c ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a Carnivora ANCESTRAL SPECIES 5 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645.d ENSGT00940000162845 ENSGT00940000155234.b ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Caniformia ANCESTRAL SPECIES 7 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00950000185137 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645.d ENSGT00940000162845 ENSGT00940000155234.b ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Caniformia_b ANCESTRAL SPECIES 5 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00950000185137 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645.d ENSGT00940000162845 ENSGT00940000155234.b ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Ursidae ANCESTRAL SPECIES 17 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00950000185137 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT01030000240068 ENSGT00940000154194.n ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645.d ENSGT00940000162845 ENSGT00940000155234.b ENSGT00510000048844 ENSGT00530000063169.a Ursus ANCESTRAL SPECIES 78 ENSGT00390000015889.o.b ENSGT00940000158189.c ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00950000185137 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT01030000240068 ENSGT00940000154194.n ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645.d ENSGT00940000162845 ENSGT00940000155234.b ENSGT00510000048844 ENSGT00530000063169.a American black bear MODERN SPECIES 869 PDHA2 (ENSUAMG00000028417) ##22 Polar bear MODERN SPECIES 301 HERC3 (ENSUMAG00000004443) NAP1L5 (ENSUMAG00000004470) ENSUMAG00000004480 ENSUMAG00000004483 TIGD2 (ENSUMAG00000004486) SNCA (ENSUMAG00000004496) MMRN1 (ENSUMAG00000004502) CCSER1 (ENSUMAG00000004506) ENSUMAG00000004518 GRID2 (ENSUMAG00000004520) SMARCAD1 (ENSUMAG00000004549) HPGDS (ENSUMAG00000004558) PDLIM5 (ENSUMAG00000004572) BMPR1B (ENSUMAG00000004581) UNC5C (ENSUMAG00000004642) PDHA2 (ENSUMAG00000004811) ##22 ENSUMAG00000004814 ENSUMAG00000004817 ENSUMAG00000004827 STPG2 (ENSUMAG00000004831) RAP1GDS1 (ENSUMAG00000004854) TSPAN5 (ENSUMAG00000004870) ENSUMAG00000004884 EIF4E (ENSUMAG00000004901) METAP1 (ENSUMAG00000004916) ENSUMAG00000004985 ADH4 (ENSUMAG00000004991) ENSUMAG00000004998 ADH6 (ENSUMAG00000005007) ENSUMAG00000005025 ENSUMAG00000005042 Mustelinae ANCESTRAL SPECIES 50 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645.d ENSGT00910000146913 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 American mink MODERN SPECIES 179 GRID2 (ENSNVIG00000022723) ATOH1 (ENSNVIG00000022721) SMARCAD1 (ENSNVIG00000022706) HPGDS (ENSNVIG00000022702) ENSNVIG00000022681 ENSNVIG00000022674 BMPR1B (ENSNVIG00000022655) UNC5C (ENSNVIG00000022616) PDHA2 (ENSNVIG00000022602) ##22 Felidae ANCESTRAL SPECIES 4 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b.c ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00990000213718 ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00940000162741.j ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.v ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 Panthera ANCESTRAL SPECIES 5 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b.c ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00990000213718 ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00940000162741.j ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.v ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 Tiger MODERN SPECIES 44 NAP1L5 (ENSPTIG00000001643) HERC3 (ENSPTIG00000018458) FAM13A (ENSPTIG00000008748) ENSPTIG00000007459 ENSPTIG00000006539 TIGD2 (ENSPTIG00000000899) SNCA (ENSPTIG00000020257) MMRN1 (ENSPTIG00000017503) CCSER1 (ENSPTIG00000016206) GRID2 (ENSPTIG00000009573) SMARCAD1 (ENSPTIG00000017868) HPGDS (ENSPTIG00000017190) PDLIM5 (ENSPTIG00000010020) BMPR1B (ENSPTIG00000005881) UNC5C (ENSPTIG00000021204) PDHA2 (ENSPTIG00000007394) ##22 ENSPTIG00000020717 Panthera_a ANCESTRAL SPECIES 2 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b.c ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00990000213718 ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00940000164334 ENSGT00390000001063 ENSGT00940000169764.b ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.v ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 leopard MODERN SPECIES 2 ENSPPRG00000023341 FAM13A (ENSPPRG00000003661) TIGD2 (ENSPPRG00000020980) ENSPPRG00000009158 MMRN1 (ENSPPRG00000010139) ENSPPRG00000010366 CCSER1 (ENSPPRG00000011445) ENSPPRG00000013269 GRID2 (ENSPPRG00000015579) ATOH1 (ENSPPRG00000021578) SMARCAD1 (ENSPPRG00000024756) HPGDS (ENSPPRG00000024591) PDLIM5 (ENSPPRG00000001230) BMPR1B (ENSPPRG00000002998) UNC5C (ENSPPRG00000005288) PDHA2 (ENSPPRG00000014814) ##22 ENSPPRG00000005836 lion MODERN SPECIES 4 FAM13A (ENSPLOG00000005414) TIGD2 (ENSPLOG00000005276) GPRIN3 (ENSPLOG00000005268) ENSPLOG00000005237 ENSPLOG00000005216 MMRN1 (ENSPLOG00000005200) CCSER1 (ENSPLOG00000005067) ENSPLOG00000004937 GRID2 (ENSPLOG00000004887) ATOH1 (ENSPLOG00000004819) SMARCAD1 (ENSPLOG00000004798) HPGDS (ENSPLOG00000004773) PDLIM5 (ENSPLOG00000004717) BMPR1B (ENSPLOG00000004675) UNC5C (ENSPLOG00000015776) PDHA2 (ENSPLOG00000015738) ##22 ENSPLOG00000015714 ENSPLOG00000015670 STPG2 (ENSPLOG00000015441) ENSPLOG00000015383 RAP1GDS1 (ENSPLOG00000014798) TSPAN5 (ENSPLOG00000014715) ENSPLOG00000014450 METAP1 (ENSPLOG00000014301) ADH5 (ENSPLOG00000014176) ADH4 (ENSPLOG00000013933) ENSPLOG00000013817 ENSPLOG00000013559 ENSPLOG00000013506 C4orf17 (ENSPLOG00000013399) TRMT10A (ENSPLOG00000013353) Cat MODERN SPECIES 235 GPRIN3 (ENSFCAG00000003595) ENSFCAG00000011488 MMRN1 (ENSFCAG00000013040) ENSFCAG00000046968 CCSER1 (ENSFCAG00000039277) ENSFCAG00000050813 GRID2 (ENSFCAG00000023738) ATOH1 (ENSFCAG00000043156) ENSFCAG00000050732 ENSFCAG00000051642 SMARCAD1 (ENSFCAG00000003958) HPGDS (ENSFCAG00000003961) PDLIM5 (ENSFCAG00000026158) BMPR1B (ENSFCAG00000022227) UNC5C (ENSFCAG00000015085) PDHA2 (ENSFCAG00000007840) ##22 ENSFCAG00000039719 STPG2 (ENSFCAG00000040357) RAP1GDS1 (ENSFCAG00000029098) TSPAN5 (ENSFCAG00000014131) EIF4E (ENSFCAG00000009949) ENSFCAG00000048389 METAP1 (ENSFCAG00000004994) ADH5 (ENSFCAG00000005005) ADH4 (ENSFCAG00000005009) ENSFCAG00000023025 ENSFCAG00000030205 CB1H4orf17 (ENSFCAG00000004690) TRMT10A (ENSFCAG00000029521) MTTP (ENSFCAG00000029668) CB1H4orf54 (ENSFCAG00000022924) Laurasiatheria_c ANCESTRAL SPECIES 8 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645.d ENSGT00910000146913 ENSGT00940000163645.c ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a Equus ANCESTRAL SPECIES 12 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00950000185040 ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645.f Donkey MODERN SPECIES 22 TIGD2 (ENSEASG00005025658) GPRIN3 (ENSEASG00005025420) SNCA (ENSEASG00005012463) MMRN1 (ENSEASG00005012461) CCSER1 (ENSEASG00005012456) GRID2 (ENSEASG00005012448) ATOH1 (ENSEASG00005032994) ENSEASG00005012443 SMARCAD1 (ENSEASG00005012382) HPGDS (ENSEASG00005035579) ENSEASG00005038252 ENSEASG00005034139 ENSEASG00005012343 BMPR1B (ENSEASG00005012334) UNC5C (ENSEASG00005010826) PDHA2 (ENSEASG00005032458) ##22 STPG2 (ENSEASG00005010801) RAP1GDS1 (ENSEASG00005010800) TSPAN5 (ENSEASG00005010799) EIF4E (ENSEASG00005010796) METAP1 (ENSEASG00005010793) ADH5 (ENSEASG00005010792) ENSEASG00005033783 ENSEASG00005026826 ENSEASG00005029981 ENSEASG00005023780 ENSEASG00005024286 ENSEASG00005018128 ENSEASG00005032616 ENSEASG00005029850 ENSEASG00005030579 Horse MODERN SPECIES 22 GPRIN3 (ENSECAG00000033602) SNCA (ENSECAG00000015766) MMRN1 (ENSECAG00000011719) CCSER1 (ENSECAG00000011463) ENSECAG00000052166 ENSECAG00000055367 ENSECAG00000032304 GRID2 (ENSECAG00000022031) ATOH1 (ENSECAG00000001213) ENSECAG00000048467 SMARCAD1 (ENSECAG00000011562) HPGDS (ENSECAG00000005730) PDLIM5 (ENSECAG00000016733) BMPR1B (ENSECAG00000012140) UNC5C (ENSECAG00000019085) PDHA2 (ENSECAG00000039979) ##22 STPG2 (ENSECAG00000026915) RAP1GDS1 (ENSECAG00000020913) TSPAN5 (ENSECAG00000014022) EIF4E (ENSECAG00000006472) METAP1 (ENSECAG00000017967) ADH5 (ENSECAG00000038523) ENSECAG00000033181 ENSECAG00000032577 ENSECAG00000015328 ENSECAG00000036418 ENSECAG00000032134 ENSECAG00000019267 ENSECAG00000039123 ENSECAG00000035069 ENSECAG00000034047 Chiroptera ANCESTRAL SPECIES 9 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645.d ENSGT00910000146913 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Microchiroptera ANCESTRAL SPECIES 10 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645.d ENSGT00910000146913 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Greater horseshoe bat MODERN SPECIES 23 FAM13A (ENSRFEG00010004628) TIGD2 (ENSRFEG00010004701) GPRIN3 (ENSRFEG00010004704) SNCA (ENSRFEG00010004726) MMRN1 (ENSRFEG00010004758) CCSER1 (ENSRFEG00010004775) GRID2 (ENSRFEG00010004827) ENSRFEG00010004855 ENSRFEG00010004858 ATOH1 (ENSRFEG00010004870) SMARCAD1 (ENSRFEG00010000277) HPGDS (ENSRFEG00010000305) PDLIM5 (ENSRFEG00010000474) BMPR1B (ENSRFEG00010000616) UNC5C (ENSRFEG00010000732) PDHA2 (ENSRFEG00010000804) ##22 STPG2 (ENSRFEG00010000828) ENSRFEG00010000881 RAP1GDS1 (ENSRFEG00010000934) TSPAN5 (ENSRFEG00010001157) ENSRFEG00010001235 METAP1 (ENSRFEG00010001278) ADH5 (ENSRFEG00010001303) ADH4 (ENSRFEG00010001364) ADH6 (ENSRFEG00010001432) ENSRFEG00010001455 ENSRFEG00010001469 ENSRFEG00010001500 ENSRFEG00010001566 C4orf17 (ENSRFEG00010001639) TRMT10A (ENSRFEG00010001680) Microbat MODERN SPECIES 949 FAM13A (ENSMLUG00000012281) ENSMLUG00000022411 SNCA (ENSMLUG00000008577) MMRN1 (ENSMLUG00000000231) CCSER1 (ENSMLUG00000013655) ENSMLUG00000023642 ENSMLUG00000028227 ENSMLUG00000029344 GRID2 (ENSMLUG00000013810) ATOH1 (ENSMLUG00000008044) SMARCAD1 (ENSMLUG00000000425) HPGDS (ENSMLUG00000000432) PDLIM5 (ENSMLUG00000002083) BMPR1B (ENSMLUG00000009090) UNC5C (ENSMLUG00000009105) PDHA2 (ENSMLUG00000014449) ##22 Euarchontoglires ANCESTRAL SPECIES 9 ENSGT00950000183033.a.b.a ENSGT00950000183033.a.a.c.b ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Primates ANCESTRAL SPECIES 10 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Haplorrhini ANCESTRAL SPECIES 20 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Simiiformes ANCESTRAL SPECIES 10 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Catarrhini ANCESTRAL SPECIES 14 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a ENSGT00940000162645 ENSGT00940000163645 ENSGT00910000146913 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Hominoidea ANCESTRAL SPECIES 10 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a.a ENSGT00940000162645 ENSGT00940000163645 ENSGT00910000146913 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000155234.b.k.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a Hominidae ANCESTRAL SPECIES 12 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00940000154550.a.f.h ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a.a ENSGT00940000162645 ENSGT00940000163645 ENSGT00910000146913 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000155234.b.k.b ENSGT00940000162708 ENSGT00510000048844 Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000156724.b ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00940000154550.a.f.h ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a.a ENSGT00940000162645 ENSGT00940000163645 ENSGT00910000146913 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000155234.b.k.b ENSGT00940000162708 ENSGT00510000048844 Homo/Pan group ANCESTRAL SPECIES 10 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000156724.b ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a.a ENSGT00940000162645 ENSGT00940000163645 ENSGT00910000146913 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000155234.b.k.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a Pan ANCESTRAL SPECIES 7 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000156724.b ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000004755.j.a ENSGT00940000154550.a.f.h ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a.a ENSGT00940000162645 ENSGT00940000163645 ENSGT00910000146913 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000162708 ENSGT00510000048844 Chimpanzee MODERN SPECIES 17 NAP1L5 (ENSPTRG00000016277) FAM13A (ENSPTRG00000016278) TIGD2 (ENSPTRG00000031142) GPRIN3 (ENSPTRG00000048747) SNCA (ENSPTRG00000052247) MMRN1 (ENSPTRG00000016284) CCSER1 (ENSPTRG00000016285) ENSPTRG00000042128 GRID2 (ENSPTRG00000016287) ATOH1 (ENSPTRG00000031141) SMARCAD1 (ENSPTRG00000023126) HPGDS (ENSPTRG00000016291) PDLIM5 (ENSPTRG00000016292) BMPR1B (ENSPTRG00000016293) UNC5C (ENSPTRG00000016296) PDHA2 (ENSPTRG00000016297) ##22 ENSPTRG00000048065 ENSPTRG00000018353 STPG2 (ENSPTRG00000016298) RAP1GDS1 (ENSPTRG00000016299) TSPAN5 (ENSPTRG00000016300) EIF4E (ENSPTRG00000016301) METAP1 (ENSPTRG00000016302) ADH5 (ENSPTRG00000016303) ADH4 (ENSPTRG00000024240) ADH6 (ENSPTRG00000016304) ENSPTRG00000051658 ADH1A (ENSPTRG00000041356) ADH1B (ENSPTRG00000039360) ADH7 (ENSPTRG00000049233) C4H4orf17 (ENSPTRG00000016306) Bonobo MODERN SPECIES 17 ENSPPAG00000040579 FAM13A (ENSPPAG00000001057) TIGD2 (ENSPPAG00000037756) GPRIN3 (ENSPPAG00000020409) SNCA (ENSPPAG00000025110) MMRN1 (ENSPPAG00000042454) CCSER1 (ENSPPAG00000037530) ENSPPAG00000038508 GRID2 (ENSPPAG00000029144) ATOH1 (ENSPPAG00000023742) SMARCAD1 (ENSPPAG00000035715) HPGDS (ENSPPAG00000039873) ENSPPAG00000034155 BMPR1B (ENSPPAG00000023623) UNC5C (ENSPPAG00000041387) PDHA2 (ENSPPAG00000018821) ##22 ENSPPAG00000024086 ENSPPAG00000002103 STPG2 (ENSPPAG00000043013) RAP1GDS1 (ENSPPAG00000029979) TSPAN5 (ENSPPAG00000043859) ENSPPAG00000043652 METAP1 (ENSPPAG00000037565) ADH5 (ENSPPAG00000028876) ADH4 (ENSPPAG00000042651) ADH6 (ENSPPAG00000035919) ENSPPAG00000033370 ADH1A (ENSPPAG00000018178) ADH1C (ENSPPAG00000037337) ADH7 (ENSPPAG00000027401) C4orf17 (ENSPPAG00000003693) Human MODERN SPECIES 16 HERC3 (ENSG00000138641) NAP1L5 (ENSG00000177432) FAM13A (ENSG00000138640) TIGD2 (ENSG00000180346) GPRIN3 (ENSG00000185477) SNCA (ENSG00000145335) MMRN1 (ENSG00000138722) CCSER1 (ENSG00000184305) GRID2 (ENSG00000152208) ATOH1 (ENSG00000172238) SMARCAD1 (ENSG00000163104) HPGDS (ENSG00000163106) PDLIM5 (ENSG00000163110) BMPR1B (ENSG00000138696) UNC5C (ENSG00000182168) PDHA2 (ENSG00000163114) ##22 STPG2 (ENSG00000163116) RAP1GDS1 (ENSG00000138698) TSPAN5 (ENSG00000168785) EIF4E (ENSG00000151247) METAP1 (ENSG00000164024) ADH5 (ENSG00000197894) ADH4 (ENSG00000198099) ADH6 (ENSG00000172955) ADH1A (ENSG00000187758) ADH1B (ENSG00000196616) ADH1C (ENSG00000248144) ADH7 (ENSG00000196344) C4orf17 (ENSG00000138813) TRMT10A (ENSG00000145331) MTTP (ENSG00000138823) Gorilla MODERN SPECIES 17 ENSGGOG00000023308 FAM13A (ENSGGOG00000024484) TIGD2 (ENSGGOG00000026736) GPRIN3 (ENSGGOG00000041041) SNCA (ENSGGOG00000005705) MMRN1 (ENSGGOG00000007582) CCSER1 (ENSGGOG00000014053) ENSGGOG00000022251 GRID2 (ENSGGOG00000000378) ATOH1 (ENSGGOG00000001096) SMARCAD1 (ENSGGOG00000023001) HPGDS (ENSGGOG00000012876) ENSGGOG00000024845 BMPR1B (ENSGGOG00000012093) UNC5C (ENSGGOG00000012106) PDHA2 (ENSGGOG00000013755) ##22 ENSGGOG00000025268 STPG2 (ENSGGOG00000042664) RAP1GDS1 (ENSGGOG00000004556) TSPAN5 (ENSGGOG00000023379) ENSGGOG00000004718 ENSGGOG00000038033 METAP1 (ENSGGOG00000001520) ADH5 (ENSGGOG00000028244) ENSGGOG00000025893 ADH6 (ENSGGOG00000001080) ENSGGOG00000039548 ADH1A (ENSGGOG00000017154) ENSGGOG00000038227 ADH1C (ENSGGOG00000011864) ADH7 (ENSGGOG00000036716) Orangutan MODERN SPECIES 17 HERC3 (ENSPPYG00000014927) NAP1L5 (ENSPPYG00000038351) FAM13A (ENSPPYG00000014928) TIGD2 (ENSPPYG00000014930) GPRIN3 (ENSPPYG00000014931) SNCA (ENSPPYG00000014932) MMRN1 (ENSPPYG00000014933) CCSER1 (ENSPPYG00000033690) GRID2 (ENSPPYG00000014934) ATOH1 (ENSPPYG00000015283) SMARCAD1 (ENSPPYG00000014935) HPGDS (ENSPPYG00000014936) ENSPPYG00000014937 BMPR1B (ENSPPYG00000014938) UNC5C (ENSPPYG00000014939) PDHA2 (ENSPPYG00000014940) ##22 ENSPPYG00000029937 STPG2 (ENSPPYG00000014941) ENSPPYG00000032768 RAP1GDS1 (ENSPPYG00000014942) TSPAN5 (ENSPPYG00000014943) EIF4E (ENSPPYG00000031353) METAP1 (ENSPPYG00000014945) ADH5 (ENSPPYG00000014946) ADH4 (ENSPPYG00000014947) ADH6 (ENSPPYG00000014948) ADH1A (ENSPPYG00000014949) ADH1C (ENSPPYG00000037917) ADH7 (ENSPPYG00000014950) C4orf17 (ENSPPYG00000014951) TRMT10A (ENSPPYG00000014952) Gibbon MODERN SPECIES 24 HERC3 (ENSNLEG00000009752) ENSNLEG00000018566 FAM13A (ENSNLEG00000009768) TIGD2 (ENSNLEG00000009788) GPRIN3 (ENSNLEG00000018567) SNCA (ENSNLEG00000014352) MMRN1 (ENSNLEG00000014338) CCSER1 (ENSNLEG00000014329) GRID2 (ENSNLEG00000014296) ATOH1 (ENSNLEG00000018621) SMARCAD1 (ENSNLEG00000014225) HPGDS (ENSNLEG00000014213) ENSNLEG00000014166 BMPR1B (ENSNLEG00000014109) UNC5C (ENSNLEG00000014104) PDHA2 (ENSNLEG00000018620) ##22 ENSNLEG00000029353 STPG2 (ENSNLEG00000014101) RAP1GDS1 (ENSNLEG00000014011) ENSNLEG00000030569 ENSNLEG00000028250 ENSNLEG00000014006 ENSNLEG00000028241 METAP1 (ENSNLEG00000013990) ADH5 (ENSNLEG00000013946) ADH4 (ENSNLEG00000013918) ADH6 (ENSNLEG00000013891) ENSNLEG00000033673 ADH1A (ENSNLEG00000026678) ADH1B (ENSNLEG00000027230) ADH7 (ENSNLEG00000013846) Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00940000158189 ENSGT00940000153593.c.b.e ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00940000158189 ENSGT00940000153593.c.b.e ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000162313 ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a.a Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00940000158189 ENSGT00940000153593.c.b.e ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000162313 ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a.a Macaca ANCESTRAL SPECIES 18 ENSGT00940000158189 ENSGT00940000153593.c.b.e ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000162313 ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a.c ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a.a Pig-tailed macaque MODERN SPECIES 326 BMPR1B (ENSMNEG00000040496) UNC5C (ENSMNEG00000029511) PDHA2 (ENSMNEG00000037788) ##22 Macaca_a ANCESTRAL SPECIES 12 ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT01100000263539.b.a.a.b.a ENSGT01100000263543.a.g.a.a.b ENSGT01100000263493.a.b.a.a.a.b.a.a.a.a.a.a ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a.c ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a.a ENSGT00390000011412 Crab-eating macaque MODERN SPECIES 15 ENSMFAG00000060716 ENSMFAG00000059341 GRID2 (ENSMFAG00000043573) ENSMFAG00000053456 ENSMFAG00000064712 ENSMFAG00000048174 ENSMFAG00000049298 SMARCAD1 (ENSMFAG00000042606) HPGDS (ENSMFAG00000044963) ENSMFAG00000054971 PDLIM5 (ENSMFAG00000030301) ENSMFAG00000055307 BMPR1B (ENSMFAG00000037039) UNC5C (ENSMFAG00000026235) ENSMFAG00000064664 PDHA2 (ENSMFAG00000028491) ##22 ENSMFAG00000053892 STPG2 (ENSMFAG00000003718) RAP1GDS1 (ENSMFAG00000000128) TSPAN5 (ENSMFAG00000002966) EIF4E (ENSMFAG00000041112) METAP1 (ENSMFAG00000041798) ENSMFAG00000030598 ADH5 (ENSMFAG00000044468) ADH4 (ENSMFAG00000003884) ENSMFAG00000050348 ADH6 (ENSMFAG00000003019) ADH1B (ENSMFAG00000001617) ADH1A (ENSMFAG00000039788) ADH7 (ENSMFAG00000039572) C4orf17 (ENSMFAG00000037946) Rhesus MODERN SPECIES 15 MMRN1 (ENSMMUG00000022003) ENSMMUG00000063123 CCSER1 (ENSMMUG00000009652) ENSMMUG00000061992 GRID2 (ENSMMUG00000002366) ENSMMUG00000053709 ENSMMUG00000055876 ENSMMUG00000055347 ENSMMUG00000049525 ATOH1 (ENSMMUG00000002367) SMARCAD1 (ENSMMUG00000022242) HPGDS (ENSMMUG00000022244) PDLIM5 (ENSMMUG00000022246) BMPR1B (ENSMMUG00000006702) UNC5C (ENSMMUG00000006309) PDHA2 (ENSMMUG00000021359) ##22 ENSMMUG00000064186 STPG2 (ENSMMUG00000013502) ENSMMUG00000064386 RAP1GDS1 (ENSMMUG00000022417) TSPAN5 (ENSMMUG00000011702) EIF4E (ENSMMUG00000011066) METAP1 (ENSMMUG00000011062) ADH5 (ENSMMUG00000003552) ADH4 (ENSMMUG00000011059) ENSMMUG00000053868 ADH6 (ENSMMUG00000015966) ADH1A (ENSMMUG00000040764) ADH1B (ENSMMUG00000018738) C5H4orf17 (ENSMMUG00000009089) TRMT10A (ENSMMUG00000056735) Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00390000010721.a.a.a.a.c.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00950000183210.d.a.c.a.a.b ENSGT00940000153168.C.a.b ENSGT00940000161041 ENSGT00940000159219 ENSGT00940000157110 ENSGT00940000161360 ENSGT00390000014963 ENSGT00390000008346 ENSGT00390000011368 ENSGT00940000159958 ENSGT00950000183159.a ENSGT00940000157306 ENSGT00390000000002.a.a.a ENSGT00940000157352 Olive baboon MODERN SPECIES 13 MMRN1 (ENSPANG00000022092) CCSER1 (ENSPANG00000023715) ENSPANG00000051085 GRID2 (ENSPANG00000009186) ENSPANG00000046446 ENSPANG00000051321 ENSPANG00000030511 ENSPANG00000045919 SMARCAD1 (ENSPANG00000019757) HPGDS (ENSPANG00000017690) ENSPANG00000037029 ENSPANG00000004585 ENSPANG00000044230 BMPR1B (ENSPANG00000008235) UNC5C (ENSPANG00000000905) PDHA2 (ENSPANG00000026247) ##22 STPG2 (ENSPANG00000009976) ENSPANG00000038256 YIPF7 (ENSPANG00000016828) KCTD8 (ENSPANG00000017025) ENSPANG00000047071 ENSPANG00000034872 GRXCR1 (ENSPANG00000021591) ENSPANG00000037932 ATP8A1 (ENSPANG00000011786) SHISA3 (ENSPANG00000025579) ENSPANG00000041009 ENSPANG00000048230 BEND4 (ENSPANG00000016087) SLC30A9 (ENSPANG00000024558) ENSPANG00000017113 Cercopithecinae_d ANCESTRAL SPECIES 232 ENSGT00940000155192 ENSGT00940000160064.b ENSGT00390000010721.a.a.a.a.c.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 Drill MODERN SPECIES 1132 BMPR1B (ENSMLEG00000033544) UNC5C (ENSMLEG00000041565) PDHA2 (ENSMLEG00000027171) ##22 Sooty mangabey MODERN SPECIES 380 GRID2 (ENSCATG00000033632) ATOH1 (ENSCATG00000015626) ENSCATG00000017159 ENSCATG00000043395 SMARCAD1 (ENSCATG00000035663) HPGDS (ENSCATG00000032070) PDLIM5 (ENSCATG00000023469) BMPR1B (ENSCATG00000029503) UNC5C (ENSCATG00000035452) PDHA2 (ENSCATG00000014867) ##22 Vervet Monkey MODERN SPECIES 26 TIGD2 (ENSCSAG00000000410) GPRIN3 (ENSCSAG00000000409) SNCA (ENSCSAG00000004228) MMRN1 (ENSCSAG00000004223) ENSCSAG00000004217 ENSCSAG00000004212 ENSCSAG00000004207 ENSCSAG00000004205 ENSCSAG00000004203 ATOH1 (ENSCSAG00000000408) SMARCAD1 (ENSCSAG00000004186) HPGDS (ENSCSAG00000004182) PDLIM5 (ENSCSAG00000004173) BMPR1B (ENSCSAG00000004147) UNC5C (ENSCSAG00000004138) PDHA2 (ENSCSAG00000000407) ##22 STPG2 (ENSCSAG00000004134) RAP1GDS1 (ENSCSAG00000004128) ENSCSAG00000000406 TSPAN5 (ENSCSAG00000004123) EIF4E (ENSCSAG00000004122) METAP1 (ENSCSAG00000004120) ADH5 (ENSCSAG00000004118) ADH4 (ENSCSAG00000004116) ADH6 (ENSCSAG00000004112) ADH1B (ENSCSAG00000004110) ADH7 (ENSCSAG00000004106) C4orf17 (ENSCSAG00000004103) TRMT10A (ENSCSAG00000004098) MTTP (ENSCSAG00000004095) C4orf54 (ENSCSAG00000000405) Rhinopithecus ANCESTRAL SPECIES 462 ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 Golden snub-nosed monkey MODERN SPECIES 2528 GRID2 (ENSRROG00000039825) ATOH1 (ENSRROG00000005018) SMARCAD1 (ENSRROG00000035309) HPGDS (ENSRROG00000005175) PDLIM5 (ENSRROG00000032186) BMPR1B (ENSRROG00000034293) UNC5C (ENSRROG00000020023) PDHA2 (ENSRROG00000037870) ##22 Black snub-nosed monkey MODERN SPECIES 524 GRID2 (ENSRBIG00000044986) ATOH1 (ENSRBIG00000025496) SMARCAD1 (ENSRBIG00000041989) HPGDS (ENSRBIG00000032193) ENSRBIG00000027918 PDLIM5 (ENSRBIG00000022095) BMPR1B (ENSRBIG00000041265) UNC5C (ENSRBIG00000042089) PDHA2 (ENSRBIG00000016800) ##22 STPG2 (ENSRBIG00000025937) RAP1GDS1 (ENSRBIG00000032597) TSPAN5 (ENSRBIG00000036088) ENSRBIG00000039027 METAP1 (ENSRBIG00000036694) ADH5 (ENSRBIG00000044755) ADH4 (ENSRBIG00000040217) ENSRBIG00000040531 ADH6 (ENSRBIG00000014607) Platyrrhini ANCESTRAL SPECIES 5 ENSGT00390000015889 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a ENSGT00940000162645 ENSGT00940000163645 ENSGT00910000146913 ENSGT00940000155234.b.m.a ENSGT00940000155234.b.m.b.a ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Cebidae ANCESTRAL SPECIES 4 ENSGT00390000015889 ENSGT00730000111564 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000155234.b.m.a ENSGT00940000155234.b.m.b.a ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 Marmoset MODERN SPECIES 15 MMRN1 (ENSCJAG00000006712) ENSCJAG00000074389 ENSCJAG00000081344 CCSER1 (ENSCJAG00000006723) ENSCJAG00000080553 ENSCJAG00000084875 GRID2 (ENSCJAG00000006737) ATOH1 (ENSCJAG00000022028) SMARCAD1 (ENSCJAG00000006778) HPGDS (ENSCJAG00000006866) ENSCJAG00000073326 PDLIM5 (ENSCJAG00000006882) ENSCJAG00000081948 BMPR1B (ENSCJAG00000006930) UNC5C (ENSCJAG00000006998) PDHA2 (ENSCJAG00000022029) ##22 ENSCJAG00000074354 STPG2 (ENSCJAG00000007049) ENSCJAG00000079273 RAP1GDS1 (ENSCJAG00000007058) TSPAN5 (ENSCJAG00000007128) EIF4E (ENSCJAG00000007151) METAP1 (ENSCJAG00000007178) ENSCJAG00000007198 ADH4 (ENSCJAG00000007244) ENSCJAG00000080110 ENSCJAG00000076576 ENSCJAG00000015102 C4orf17 (ENSCJAG00000015119) TRMT10A (ENSCJAG00000041587) MTTP (ENSCJAG00000015144) Strepsirrhini ANCESTRAL SPECIES 18 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 ENSGT00390000013159 Bushbaby MODERN SPECIES 252 ATOH1 (ENSOGAG00000030783) SMARCAD1 (ENSOGAG00000011444) PDLIM5 (ENSOGAG00000011454) BMPR1B (ENSOGAG00000003063) UNC5C (ENSOGAG00000003065) PDHA2 (ENSOGAG00000030453) ##22 RAP1GDS1 (ENSOGAG00000006268) TSPAN5 (ENSOGAG00000006272) ENSOGAG00000001131 ENSOGAG00000015636 ADH5 (ENSOGAG00000015640) ADH4 (ENSOGAG00000015642) ENSOGAG00000015644 ENSOGAG00000025143 ADH7 (ENSOGAG00000014567) C4orf17 (ENSOGAG00000005332) ENSOGAG00000005330 MTTP (ENSOGAG00000005331) C4orf54 (ENSOGAG00000034835) DAPP1 (ENSOGAG00000005335) LAMTOR3 (ENSOGAG00000005336) Lemuriformes ANCESTRAL SPECIES ENSGT00530000063174.a.j ##22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00530000063174.a.j ##22 Greater bamboo lemur MODERN SPECIES 247 ENSPSMG00000025581 TSPAN5 (ENSPSMG00000025577) RAP1GDS1 (ENSPSMG00000025572) STPG2 (ENSPSMG00000025553) ENSPSMG00000025549 ##22 UNC5C (ENSPSMG00000025546) BMPR1B (ENSPSMG00000025525) PDLIM5 (ENSPSMG00000025509) HPGDS (ENSPSMG00000025446) SMARCAD1 (ENSPSMG00000025438) ATOH1 (ENSPSMG00000025426) GRID2 (ENSPSMG00000025424) ENSPSMG00000025397 Euarchontoglires_A ANCESTRAL SPECIES 9 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00570000079168.b.b.b ENSGT00950000183033.a.a.c.b ENSGT00940000162273 ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Glires ANCESTRAL SPECIES 8 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00950000183033.a.a.c.b ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Lagomorpha ANCESTRAL SPECIES ENSGT00530000063174.a.j ##22 Rabbit MODERN SPECIES 6 CCSER1 (ENSOCUG00000001300) ENSOCUG00000038538 ENSOCUG00000035160 ENSOCUG00000033357 ENSOCUG00000035857 #21 GRID2 (ENSOCUG00000011440) ATOH1 (ENSOCUG00000013154) SMARCAD1 (ENSOCUG00000017283) HPGDS (ENSOCUG00000017300) ENSOCUG00000033747 PDLIM5 (ENSOCUG00000009746) ENSOCUG00000039543 BMPR1B (ENSOCUG00000015048) UNC5C (ENSOCUG00000015054) ENSOCUG00000036294 PDHA2 (ENSOCUG00000002546) ##22 ENSOCUG00000028212 ENSOCUG00000021917 STPG2 (ENSOCUG00000029560) RAP1GDS1 (ENSOCUG00000016535) TSPAN5 (ENSOCUG00000016552) ENSOCUG00000014372 ENSOCUG00000011845 ENSOCUG00000033260 #21 ENSOCUG00000001456 METAP1 (ENSOCUG00000004258) ADH5 (ENSOCUG00000004263) ADH4 (ENSOCUG00000023401) ENSOCUG00000037547 ENSOCUG00000029646 ADH6 (ENSOCUG00000033073) Pika MODERN SPECIES 10358 PDHA2 (ENSOPRG00000013900) ##22 Rodentia ANCESTRAL SPECIES 13 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00950000183033.a.a.c.b ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Rodentia_B ANCESTRAL SPECIES 30 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Myomorpha ANCESTRAL SPECIES 42 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.dd ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Muroidea ANCESTRAL SPECIES 53 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.dd ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00940000154339 ENSGT00390000006671 ENSGT00940000155827 ENSGT00940000156840.a.b ENSGT00940000156840.b.w ENSGT00940000163522.A.g.a ENSGT00940000156840.b.x ENSGT00940000162297.k ENSGT00940000162297.l ENSGT00940000163522.B ENSGT00940000163522.A.h ENSGT00940000162684 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.dd ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Cricetidae ANCESTRAL SPECIES 6 ENSGT00940000154339 ENSGT00390000006671 ENSGT00940000155827 ENSGT00940000156840.a.b ENSGT00940000156840.b.x ENSGT00940000156840.b.w ENSGT00940000163522.A.g.a ENSGT00940000162297.k ENSGT00940000162297.l ENSGT00940000163522.B ENSGT00940000163522.A.h ENSGT00940000162684 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.dd ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00940000154339 ENSGT00390000006671 ENSGT00940000155827 ENSGT00940000156840.a.b ENSGT00940000156840.b.x ENSGT00940000156840.b.w ENSGT00940000163522.A.g.a ENSGT00940000162297.k ENSGT00940000162297.l ENSGT00940000163522.B ENSGT00940000163522.A.h ENSGT00940000162684 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.dd ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Northern American deer mouse MODERN SPECIES 19 ENSPEMG00000031096 ENSPEMG00000028796 ENSPEMG00000026457 ENSPEMG00000028416 ENSPEMG00000028917 ENSPEMG00000021664 Gbp2 (ENSPEMG00000014377) Gbp2b (ENSPEMG00000021955) ENSPEMG00000029463 Gbp3 (ENSPEMG00000020366) Gbp7 (ENSPEMG00000020532) Gbp5 (ENSPEMG00000017654) Pdlim5 (ENSPEMG00000000844) Bmpr1b (ENSPEMG00000012954) Unc5c (ENSPEMG00000020337) Pdha2 (ENSPEMG00000015169) ##22 Stpg2 (ENSPEMG00000022992) Rap1gds1 (ENSPEMG00000015670) Tspan5 (ENSPEMG00000023594) ENSPEMG00000023956 Metap1 (ENSPEMG00000023712) Adh5 (ENSPEMG00000024078) Adh4 (ENSPEMG00000017427) ENSPEMG00000029521 Adh6b (ENSPEMG00000006239) Adh6a (ENSPEMG00000000326) Adh7 (ENSPEMG00000003478) 4930579F01Rik (ENSPEMG00000006959) Trmt10a (ENSPEMG00000011113) Mttp (ENSPEMG00000013372) 1110002E22Rik (ENSPEMG00000016355) Cricetinae ANCESTRAL SPECIES 12 ENSGT00940000154284.a ENSGT00530000063408.B ENSGT00940000157730 ENSGT00940000154339 ENSGT00390000006671 ENSGT00940000155827 ENSGT00940000163522.A.g.a ENSGT00940000162297.k ENSGT00940000162297.l ENSGT00940000163522.B ENSGT00940000163522.A.h ENSGT00940000162684 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 Chinese hamster chok1gshd MODERN SPECIES 66 Gbp2 (ENSCGRG00001023495) Gbp3 (ENSCGRG00001022090) Gbp7 (ENSCGRG00001000702) Gbp5 (ENSCGRG00001014326) Pdlim5 (ENSCGRG00001025015) Bmpr1b (ENSCGRG00001019865) Unc5c (ENSCGRG00001024324) Pdha2 (ENSCGRG00001012024) ##22 Stpg2 (ENSCGRG00001011952) ENSCGRG00001006395 Rap1gds1 (ENSCGRG00001017066) Tspan5 (ENSCGRG00001001260) ENSCGRG00001000181 Metap1 (ENSCGRG00001002302) Adh5 (ENSCGRG00001000437) Adh6b (ENSCGRG00001011022) ENSCGRG00001012224 Adh6a (ENSCGRG00001013383) ENSCGRG00001000595 ENSCGRG00001017351 Adh7 (ENSCGRG00001008109) 4930579F01Rik (ENSCGRG00001000415) Trmt10a (ENSCGRG00001020257) Murinae ANCESTRAL SPECIES 5 ENSGT00940000154339 ENSGT00390000006671 ENSGT00940000155827 ENSGT00940000156840.a.b ENSGT00940000156840.b.w ENSGT00940000163522.A.g.a ENSGT00940000156840.b.x ENSGT00940000162297.k ENSGT00940000162297.l ENSGT00940000163522.B ENSGT00940000163522.A.h ENSGT00940000162684 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.dd ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Mus ANCESTRAL SPECIES 7 ENSGT00940000155667 ENSGT00940000154284.a ENSGT00530000063408.B ENSGT00940000157730 ENSGT00940000154339 ENSGT00390000006671 ENSGT00940000155827 ENSGT00940000162297.k ENSGT00940000162297.l ENSGT00940000163522.B ENSGT00940000163522.A.h ENSGT00940000162684 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.dd ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Mus_A ANCESTRAL SPECIES 9 ENSGT00940000155667 ENSGT00940000154284.a ENSGT00530000063408.B ENSGT00940000157730 ENSGT00940000154339 ENSGT00390000006671 ENSGT00940000155827 ENSGT00940000162297.k ENSGT00940000162297.l ENSGT00940000163522.B ENSGT00940000163522.A.h ENSGT00940000162684 ENSGT00940000155292.j ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.dd ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Mus_B ANCESTRAL SPECIES 8 ENSGT00940000155667 ENSGT00940000154284.a ENSGT00530000063408.B ENSGT00940000157730 ENSGT00940000154339 ENSGT00390000006671 ENSGT00940000155827 ENSGT00940000162297.k ENSGT00940000162297.l ENSGT00940000163522.B ENSGT00940000163522.A.h ENSGT00940000162684 ENSGT00940000155292.j ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194.dd ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Mouse MODERN SPECIES 12 Sh3glb1 (ENSMUSG00000037062) Selenof (ENSMUSG00000037072) Hs2st1 (ENSMUSG00000040151) Lmo4 (ENSMUSG00000028266) Pkn2 (ENSMUSG00000004591) Gtf2b (ENSMUSG00000028271) Kyat3 (ENSMUSG00000040213) Gbp2 (ENSMUSG00000028270) Gbp2b (ENSMUSG00000040264) Gbp3 (ENSMUSG00000028268) Gbp7 (ENSMUSG00000040253) Gbp5 (ENSMUSG00000105504) Pdlim5 (ENSMUSG00000028273) Bmpr1b (ENSMUSG00000052430) Unc5c (ENSMUSG00000059921) Pdha2 (ENSMUSG00000047674) ##22 Stpg2 (ENSMUSG00000047940) Rap1gds1 (ENSMUSG00000028149) Tspan5 (ENSMUSG00000028152) Eif4e (ENSMUSG00000028156) Metap1 (ENSMUSG00000005813) Adh5 (ENSMUSG00000028138) Adh4 (ENSMUSG00000037797) Adh6b (ENSMUSG00000074206) Adh6a (ENSMUSG00000053054) Adh1 (ENSMUSG00000074207) Adh7 (ENSMUSG00000055301) 4930579F01Rik (ENSMUSG00000012042) Trmt10a (ENSMUSG00000004127) Mttp (ENSMUSG00000028158) 1110002E22Rik (ENSMUSG00000090066) Mus_C ANCESTRAL SPECIES 6 ENSGT00940000155667 ENSGT00940000154284.a ENSGT00530000063408.B ENSGT00940000157730 ENSGT00940000154339 ENSGT00390000006671 ENSGT00940000155827 ENSGT00940000162297.k ENSGT00940000162297.l ENSGT00940000163522.B ENSGT00940000163522.A.h ENSGT00940000162684 ENSGT00940000155292.j ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000155429.a ENSGT00940000154194.dd ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Steppe mouse MODERN SPECIES 2991 Pdlim5 (ENSMSIG00000025976) Bmpr1b (ENSMSIG00000025934) Unc5c (ENSMSIG00000025797) Pdha2 (ENSMSIG00000025778) ##22 spretus MODERN SPECIES 12 Sh3glb1 (MGP_SPRETEiJ_G0026658) MGP_SPRETEiJ_G0026657 Hs2st1 (MGP_SPRETEiJ_G0026656) Lmo4 (MGP_SPRETEiJ_G0026655) Pkn2 (MGP_SPRETEiJ_G0026654) Gtf2b (MGP_SPRETEiJ_G0026653) Kyat3 (MGP_SPRETEiJ_G0026652) Gbp2 (MGP_SPRETEiJ_G0026651) MGP_SPRETEiJ_G0026650 Gbp3 (MGP_SPRETEiJ_G0026649) Gbp7 (MGP_SPRETEiJ_G0026648) Gbp5 (MGP_SPRETEiJ_G0026647) Pdlim5 (MGP_SPRETEiJ_G0026646) Bmpr1b (MGP_SPRETEiJ_G0026645) Unc5c (MGP_SPRETEiJ_G0026644) Pdha2 (MGP_SPRETEiJ_G0026643) ##22 Stpg2 (MGP_SPRETEiJ_G0026642) Rap1gds1 (MGP_SPRETEiJ_G0026641) MGP_SPRETEiJ_G0026640 Eif4e (MGP_SPRETEiJ_G0026639) Metap1 (MGP_SPRETEiJ_G0026638) Adh5 (MGP_SPRETEiJ_G0026637) Adh4 (MGP_SPRETEiJ_G0026636) Adh6a (MGP_SPRETEiJ_G0026635) Adh1 (MGP_SPRETEiJ_G0026634) Adh7 (MGP_SPRETEiJ_G0026633) 4930579F01Rik (MGP_SPRETEiJ_G0026632) Trmt10a (MGP_SPRETEiJ_G0026631) Mttp (MGP_SPRETEiJ_G0026630) 1110002E22Rik (MGP_SPRETEiJ_G0026629) MGP_SPRETEiJ_G0026628 Ryukyu mouse MODERN SPECIES 12 Sh3glb1 (MGP_CAROLIEiJ_G0025703) MGP_CAROLIEiJ_G0025702 Hs2st1 (MGP_CAROLIEiJ_G0025701) Lmo4 (MGP_CAROLIEiJ_G0025700) Pkn2 (MGP_CAROLIEiJ_G0025699) Gtf2b (MGP_CAROLIEiJ_G0025698) Kyat3 (MGP_CAROLIEiJ_G0025697) Gbp2 (MGP_CAROLIEiJ_G0025696) Gbp2b (MGP_CAROLIEiJ_G0025695) MGP_CAROLIEiJ_G0025694 Gbp7 (MGP_CAROLIEiJ_G0025693) Gbp5 (MGP_CAROLIEiJ_G0025692) Pdlim5 (MGP_CAROLIEiJ_G0025691) Bmpr1b (MGP_CAROLIEiJ_G0025690) Unc5c (MGP_CAROLIEiJ_G0025689) Pdha2 (MGP_CAROLIEiJ_G0025688) ##22 Stpg2 (MGP_CAROLIEiJ_G0025687) Rap1gds1 (MGP_CAROLIEiJ_G0025686) Tspan5 (MGP_CAROLIEiJ_G0025685) Eif4e (MGP_CAROLIEiJ_G0025684) Metap1 (MGP_CAROLIEiJ_G0025683) MGP_CAROLIEiJ_G0025681 Adh6a (MGP_CAROLIEiJ_G0025680) Adh1 (MGP_CAROLIEiJ_G0025679) Adh7 (MGP_CAROLIEiJ_G0025678) MGP_CAROLIEiJ_G0025677 Trmt10a (MGP_CAROLIEiJ_G0025676) Mttp (MGP_CAROLIEiJ_G0025675) 1110002E22Rik (MGP_CAROLIEiJ_G0025674) MGP_CAROLIEiJ_G0025673 Dapp1 (MGP_CAROLIEiJ_G0025672) Shrew mouse MODERN SPECIES 17 Sh3glb1 (MGP_PahariEiJ_G0027153) MGP_PahariEiJ_G0027152 Hs2st1 (MGP_PahariEiJ_G0027151) Lmo4 (MGP_PahariEiJ_G0027150) Pkn2 (MGP_PahariEiJ_G0027149) Gtf2b (MGP_PahariEiJ_G0027148) Kyat3 (MGP_PahariEiJ_G0027147) Gbp2 (MGP_PahariEiJ_G0027145) Gbp2b (MGP_PahariEiJ_G0027144) Gbp3 (MGP_PahariEiJ_G0027143) Gbp7 (MGP_PahariEiJ_G0027142) Gbp5 (MGP_PahariEiJ_G0027141) Pdlim5 (MGP_PahariEiJ_G0027140) Bmpr1b (MGP_PahariEiJ_G0027139) Unc5c (MGP_PahariEiJ_G0027138) Pdha2 (MGP_PahariEiJ_G0027137) ##22 MGP_PahariEiJ_G0027136 Rap1gds1 (MGP_PahariEiJ_G0027135) Tspan5 (MGP_PahariEiJ_G0027134) MGP_PahariEiJ_G0027133 Metap1 (MGP_PahariEiJ_G0027132) Adh5 (MGP_PahariEiJ_G0027131) Adh4 (MGP_PahariEiJ_G0027130) Adh6a (MGP_PahariEiJ_G0027129) Adh1 (MGP_PahariEiJ_G0027128) Adh7 (MGP_PahariEiJ_G0027127) MGP_PahariEiJ_G0027126 MGP_PahariEiJ_G0027125 Mttp (MGP_PahariEiJ_G0027124) 1110002E22Rik (MGP_PahariEiJ_G0027123) MGP_PahariEiJ_G0027122 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1188 Upp1 (ENSNGAG00000000090) Gm11992 (ENSNGAG00000000516) Sun3 (ENSNGAG00000001418) Hus1 (ENSNGAG00000004732) Pkd1l1 (ENSNGAG00000005394) ENSNGAG00000013633 ##22 Tns3 (ENSNGAG00000011659) ENSNGAG00000020291 Igfbp3 (ENSNGAG00000001324) Igfbp1 (ENSNGAG00000004452) Ccdc201 (ENSNGAG00000016158) Adcy1 (ENSNGAG00000016931) ENSNGAG00000019239 Spag6l (ENSNGAG00000000639) Igll1 (ENSNGAG00000012165) ENSNGAG00000012863 Top3b (ENSNGAG00000013394) Ppm1f (ENSNGAG00000014819) Mapk1 (ENSNGAG00000017072) Ypel1 (ENSNGAG00000011268) Ppil2 (ENSNGAG00000013353) Upper Galilee mountains blind mole rat MODERN SPECIES 1892 Pdlim5 (ENSNGAG00000010868) Bmpr1b (ENSNGAG00000010895) Unc5c (ENSNGAG00000013650) ENSNGAG00000020993 ##22 Rap1gds1 (ENSNGAG00000007074) Tspan5 (ENSNGAG00000012715) ENSNGAG00000018806 Metap1 (ENSNGAG00000012208) Adh5 (ENSNGAG00000007953) Adh4 (ENSNGAG00000012271) ENSNGAG00000020225 Adh6a (ENSNGAG00000013297) Adh1 (ENSNGAG00000020406) 4930579F01Rik (ENSNGAG00000010035) Trmt10a (ENSNGAG00000020021) Mttp (ENSNGAG00000013317) Dapp1 (ENSNGAG00000020380) ENSNGAG00000018738 Dnajb14 (ENSNGAG00000020717) Kangaroo rat MODERN SPECIES 441 Herc3 (ENSDORG00000003569) Fam13a (ENSDORG00000003574) Tigd2 (ENSDORG00000025654) ENSDORG00000002588 Snca (ENSDORG00000009317) Mmrn1 (ENSDORG00000006592) ENSDORG00000027149 Grid2 (ENSDORG00000011710) Atoh1 (ENSDORG00000028007) Smarcad1 (ENSDORG00000012331) Hpgds (ENSDORG00000027463) ENSDORG00000003185 ENSDORG00000026753 Bmpr1b (ENSDORG00000000215) Unc5c (ENSDORG00000000217) ENSDORG00000025202 ##22 ENSDORG00000000260 Rap1gds1 (ENSDORG00000016143) Tspan5 (ENSDORG00000005084) Eif4e (ENSDORG00000002901) Metap1 (ENSDORG00000009104) Adh5 (ENSDORG00000009107) Adh4 (ENSDORG00000012881) ENSDORG00000023427 ENSDORG00000028157 Rodentia_A ANCESTRAL SPECIES 24 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00950000183033.a.a.c.b ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 Hystricomorpha ANCESTRAL SPECIES 65 ENSGT00950000183033.a.b.a ENSGT00950000183033.a.a.c.b ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT01030000235745 ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 Naked mole-rat female MODERN SPECIES 26 ENSHGLG00000048185 ENSHGLG00000037793 GRID2 (ENSHGLG00000004059) ENSHGLG00000020623 ENSHGLG00000033791 ENSHGLG00000037196 ENSHGLG00000005070 HPGDS (ENSHGLG00000039097) ENSHGLG00000048563 ENSHGLG00000032448 ENSHGLG00000006128 ENSHGLG00000033607 ENSHGLG00000035615 BMPR1B (ENSHGLG00000008496) ENSHGLG00000015705 ENSHGLG00000013357 ##22 ENSHGLG00000008980 ENSHGLG00000045804 ENSHGLG00000013760 ENSHGLG00000049854 ENSHGLG00000005415 ANXA3 (ENSHGLG00000005040) ENSHGLG00000004648 ENSHGLG00000004308 NAA11 (ENSHGLG00000004240) ENSHGLG00000040025 GK2 (ENSHGLG00000004055) ENSHGLG00000040695 ENSHGLG00000005029 ENSHGLG00000037275 ANTXR2 (ENSHGLG00000003724) Sciuridae ANCESTRAL SPECIES 43 ENSGT00940000158189 ENSGT00730000111564 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 Eurasian red squirrel MODERN SPECIES 18 SNCA (ENSSVLG00005013695) MMRN1 (ENSSVLG00005013447) ENSSVLG00005013377 ENSSVLG00005013336 CCSER1 (ENSSVLG00005013176) GRID2 (ENSSVLG00005013012) ATOH1 (ENSSVLG00005012969) ENSSVLG00005012950 ENSSVLG00005012922 SMARCAD1 (ENSSVLG00005012842) HPGDS (ENSSVLG00005012759) PDLIM5 (ENSSVLG00005012519) ENSSVLG00005012440 BMPR1B (ENSSVLG00005012210) UNC5C (ENSSVLG00005011917) PDHA2 (ENSSVLG00005011855) ##22 ENSSVLG00005011783 ENSSVLG00005011739 STPG2 (ENSSVLG00005011406) RAP1GDS1 (ENSSVLG00005010759) TSPAN5 (ENSSVLG00005010633) ENSSVLG00005010593 ENSSVLG00005010514 ENSSVLG00005010489 METAP1 (ENSSVLG00005010452) ADH5 (ENSSVLG00005010428) ENSSVLG00005010395 ADH4 (ENSSVLG00005010268) ENSSVLG00005010217 ENSSVLG00005009788 ENSSVLG00005009691 Atlantogenata ANCESTRAL SPECIES 57 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 Afrotheria ANCESTRAL SPECIES 67 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000163645 ENSGT00940000162845.y ENSGT00940000155234.b ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00910000144274 ENSGT00390000013159 ENSGT00940000157887 Afrotheria_a ANCESTRAL SPECIES 62 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ##22 ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000163645 ENSGT00940000155234.b.a ENSGT00940000162845.y ENSGT00940000155234.b.b ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00910000144274 ENSGT00390000013159 Elephant MODERN SPECIES 95 BMPR1B (ENSLAFG00000010753) UNC5C (ENSLAFG00000010761) PDHA2 (ENSLAFG00000008485) ##22 STPG2 (ENSLAFG00000012449) RAP1GDS1 (ENSLAFG00000003961) TSPAN5 (ENSLAFG00000003964) ENSLAFG00000030079 EIF4E (ENSLAFG00000002450) METAP1 (ENSLAFG00000015280) ADH5 (ENSLAFG00000001005) ADH6 (ENSLAFG00000013178) ENSLAFG00000030511 ENSLAFG00000025758 ENSLAFG00000029937 ENSLAFG00000008679 C4orf17 (ENSLAFG00000007541) TRMT10A (ENSLAFG00000029276) MTTP (ENSLAFG00000017868) Xenarthra ANCESTRAL SPECIES ENSGT00530000063174.a.j ##22 Sloth MODERN SPECIES 8958 PDHA2 (ENSCHOG00000005414) ##22 Marsupialia DUPLICATION Marsupialia ANCESTRAL SPECIES 23 ENSGT00530000063174.a.g #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00530000063503.a.a ENSGT00530000063558.A ENSGT00510000047809 ENSGT00940000159169 ENSGT00940000155530 ENSGT00390000007797 ENSGT00940000157095 ENSGT00550000074838 ENSGT00390000000191 ENSGT00390000004660.C.b ENSGT00390000006574 ENSGT00950000182852.A.a.b ENSGT00940000158272 ENSGT00940000158147 ENSGT00940000161415 ENSGT00530000063174.a.g #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a.f #37 ENSGT00390000005330 Diprotodontia ANCESTRAL SPECIES 23 ENSGT00530000063503.a.a ENSGT00530000063558.A ENSGT00510000047809 ENSGT00940000159169 ENSGT00940000155530 ENSGT00390000007797 ENSGT00940000157095 ENSGT00550000074838 ENSGT00390000000191 ENSGT00390000004660.C.b ENSGT00390000006574 ENSGT00950000182852.A.a.b ENSGT00940000158272 ENSGT00940000158147 ENSGT00940000161415 ENSGT00530000063174.a.g #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a.f #37 ENSGT00390000005330 ENSGT00950000183121.b.b.b.b Diprotodontia_a ANCESTRAL SPECIES 24 ENSGT00530000063503.a.a ENSGT00530000063558.A ENSGT00510000047809 ENSGT00940000159169 ENSGT00940000155530 ENSGT00390000007797 ENSGT00940000157095 ENSGT00550000074838 ENSGT00390000000191 ENSGT00390000004660.C.b ENSGT00390000006574 ENSGT00950000182852.A.a.b ENSGT00940000158272 ENSGT00940000158147 ENSGT00940000161415 ENSGT00530000063174.a.g #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a.f #37 ENSGT00390000005330 ENSGT00950000183121.b.b.b.b Common wonbat MODERN SPECIES 56 IMPG2 (ENSVURG00010013164) ENSVURG00010013009 TFG (ENSVURG00010012983) ADGRG7 (ENSVURG00010012960) TMEM45A (ENSVURG00010012942) ENSVURG00010012941 TOMM70 (ENSVURG00010012184) NIT2 (ENSVURG00010012148) TBC1D23 (ENSVURG00010012116) ENSVURG00010012099 CMSS1 (ENSVURG00010012075) FILIP1L (ENSVURG00010012064) COL8A1 (ENSVURG00010012056) DCBLD2 (ENSVURG00010012042) ST3GAL6 (ENSVURG00010012019) ENSVURG00010011973 #22 ENSVURG00010011964 MAP3K15 (ENSVURG00010011944) #23 BCLAF3 (ENSVURG00010011888) #25 ENSVURG00010011864 #26 EIF1AX (ENSVURG00010011856) #27 RPS6KA3 (ENSVURG00010011816) #28 CNKSR2 (ENSVURG00010011791) #29 ENSVURG00010011764 SMPX (ENSVURG00010011755) #31 MBTPS2 (ENSVURG00010011746) #32 SMS (ENSVURG00010011730) #33 PHEX (ENSVURG00010011707) #34 PTCHD1 (ENSVURG00010011688) #36 ENSVURG00010011668 #37 ACOT9 (ENSVURG00010011656) koala MODERN SPECIES 36 ENSPCIG00000032452 ENSPCIG00000009157 #22 MAP3K15 (ENSPCIG00000009152) #23 SH3KBP1 (ENSPCIG00000029212) #24 BCLAF3 (ENSPCIG00000007517) #25 MAP7D2 (ENSPCIG00000007534) #26 EIF1AX (ENSPCIG00000007615) #27 RPS6KA3 (ENSPCIG00000007618) #28 CNKSR2 (ENSPCIG00000011723) #29 ENSPCIG00000011721 #31 MBTPS2 (ENSPCIG00000011718) #32 SMS (ENSPCIG00000033142) #33 PHEX (ENSPCIG00000011706) #34 ENSPCIG00000011702 PTCHD1 (ENSPCIG00000008175) #36 ENSPCIG00000008170 #37 ACOT9 (ENSPCIG00000008098) Tasmanian devil MODERN SPECIES 2 ENSSHAG00000032206 ENSSHAG00000031464 TMEM45A (ENSSHAG00000004347) ENSSHAG00000006175 TOMM70 (ENSSHAG00000007111) NIT2 (ENSSHAG00000007371) TBC1D23 (ENSSHAG00000007828) ENSSHAG00000008996 CMSS1 (ENSSHAG00000009321) ENSSHAG00000030984 FILIP1L (ENSSHAG00000011515) COL8A1 (ENSSHAG00000012024) ENSSHAG00000022061 ENSSHAG00000010926 ENSSHAG00000024653 ENSSHAG00000015375 #22 MAP3K15 (ENSSHAG00000014925) #23 SH3KBP1 (ENSSHAG00000013892) #24 BCLAF3 (ENSSHAG00000012448) #25 EIF1AX (ENSSHAG00000010995) #27 RPS6KA3 (ENSSHAG00000010273) #28 ENSSHAG00000024113 CNKSR2 (ENSSHAG00000013024) #29 KLHL34 (ENSSHAG00000025108) #30 SMPX (ENSSHAG00000023724) #31 MBTPS2 (ENSSHAG00000012034) #32 SMS (ENSSHAG00000011004) #33 PHEX (ENSSHAG00000008915) #34 PTCHD1 (ENSSHAG00000012338) #36 PRDX4 (ENSSHAG00000029195) #37 ACOT9 (ENSSHAG00000010202) Opossum MODERN SPECIES 3 NXPE3 (ENSMODG00000001891) NFKBIZ (ENSMODG00000001888) ENSMODG00000025182 ZPLD1 (ENSMODG00000001877) ENSMODG00000042278 ENSMODG00000037530 ENSMODG00000039570 ENSMODG00000043822 #21 ALCAM (ENSMODG00000001829) ENSMODG00000043098 CBLB (ENSMODG00000001816) ENSMODG00000041564 CCDC54 (ENSMODG00000025189) BBX (ENSMODG00000001748) ENSMODG00000028099 #21 ENSMODG00000009055 #22 ENSMODG00000009020 #23 ENSMODG00000008531 #24 BCLAF3 (ENSMODG00000008177) #25 MAP7D2 (ENSMODG00000008158) #26 ENSMODG00000008113 ENSMODG00000027820 #27 RPS6KA3 (ENSMODG00000008086) #28 ENSMODG00000051481 #21 ENSMODG00000043235 CNKSR2 (ENSMODG00000008001) #29 ENSMODG00000007934 #31 MBTPS2 (ENSMODG00000007926) #32 ENSMODG00000007897 #33 PHEX (ENSMODG00000007861) #34 ENSMODG00000050590 Marsupialia ANCESTRAL SPECIES ENSGT00530000063174.a.h #22 Marsupialia_b ANCESTRAL SPECIES ENSGT00530000063174.a.h #22 Diprotodontia ANCESTRAL SPECIES ENSGT00530000063174.a.h #22 Diprotodontia_a ANCESTRAL SPECIES 3 ENSGT00940000154967.b ENSGT00940000154386.ob ENSGT00940000158746 ENSGT00940000155117.e ENSGT00940000155117.f.a ENSGT00390000001114 ENSGT00940000162420 ENSGT00390000006200 ENSGT00940000155195 ENSGT00940000157937 ENSGT00940000158520 ENSGT00940000157316 ENSGT00940000161004 ENSGT00940000161034 ENSGT00940000156099 ENSGT00530000063174.a.h #22 ENSGT01030000234606.b ENSGT00390000010743.a ENSGT00940000156236 ENSGT00390000012568 ENSGT00730000111014 ENSGT00530000063751.a ENSGT00940000154614 ENSGT00940000155635 ENSGT00390000001254 ENSGT00530000063646.a ENSGT00940000154499 ENSGT00940000154149.b.a ENSGT00940000159391 ENSGT00390000014594 ENSGT00390000014781 koala MODERN SPECIES 16 ENSPCIG00000034151 B3GALT2 (ENSPCIG00000028629) CDC73 (ENSPCIG00000028627) GLRX2 (ENSPCIG00000028630) RO60 (ENSPCIG00000028632) UCHL5 (ENSPCIG00000028635) RGS2 (ENSPCIG00000028637) RGS13 (ENSPCIG00000028638) RGS1 (ENSPCIG00000028640) RGS21 (ENSPCIG00000028642) RGS18 (ENSPCIG00000028645) ENSPCIG00000009505 BRINP3 (ENSPCIG00000011884) ENSPCIG00000030217 ENSPCIG00000005019 ENSPCIG00000014129 #22 ENSPCIG00000029214 ENSPCIG00000004330 ENSPCIG00000021168 ENSPCIG00000002441 PLA2G4A (ENSPCIG00000002412) PTGS2 (ENSPCIG00000002400) PDC (ENSPCIG00000008954) ODR4 (ENSPCIG00000008957) TPR (ENSPCIG00000009067) ENSPCIG00000034554 ENSPCIG00000035517 ##14 HMCN1 (ENSPCIG00000000542) IVNS1ABP (ENSPCIG00000002510) SWT1 (ENSPCIG00000002443) TRMT1L (ENSPCIG00000002409) Common wonbat MODERN SPECIES 1114 CDC73 (ENSVURG00010009900) B3GALT2 (ENSVURG00010009911) GLRX2 (ENSVURG00010009918) RO60 (ENSVURG00010009922) UCHL5 (ENSVURG00010009933) RGS2 (ENSVURG00010009951) RGS13 (ENSVURG00010009957) RGS1 (ENSVURG00010009970) RGS21 (ENSVURG00010009982) RGS18 (ENSVURG00010009989) ENSVURG00010009999 ENSVURG00010010006 BRINP3 (ENSVURG00010010014) ENSVURG00010010022 ENSVURG00010010029 ENSVURG00010010036 #22 Wallaby MODERN SPECIES 3736 ENSMEUG00000015516 #22 Tasmanian devil MODERN SPECIES 3 B3GALT2 (ENSSHAG00000026757) CDC73 (ENSSHAG00000013464) GLRX2 (ENSSHAG00000031431) RO60 (ENSSHAG00000027682) UCHL5 (ENSSHAG00000030758) RGS2 (ENSSHAG00000021123) ENSSHAG00000023026 RGS1 (ENSSHAG00000025712) RGS21 (ENSSHAG00000022729) ENSSHAG00000029586 RGS18 (ENSSHAG00000006527) ENSSHAG00000027804 BRINP3 (ENSSHAG00000007307) ENSSHAG00000031269 ENSSHAG00000030508 ENSSHAG00000005427 #22 PLA2G4A (ENSSHAG00000016618) PTGS2 (ENSSHAG00000016171) PDC (ENSSHAG00000015671) ODR4 (ENSSHAG00000015497) TPR (ENSSHAG00000015305) ENSSHAG00000015244 HMCN1 (ENSSHAG00000014526) IVNS1ABP (ENSSHAG00000010210) SWT1 (ENSSHAG00000009241) TRMT1L (ENSSHAG00000008812) RNF2 (ENSSHAG00000008595) NIBAN1 (ENSSHAG00000005345) EDEM3 (ENSSHAG00000003278) ENSSHAG00000016590 TSEN15 (ENSSHAG00000025836) Platypus MODERN SPECIES 6 STS (ENSOANG00000050575) PUDP (ENSOANG00000004048) ENSOANG00000004047 PRKX (ENSOANG00000004046) ENSOANG00000004044 ARSF (ENSOANG00000004043) ENSOANG00000004042 ENSOANG00000004040 ARSD (ENSOANG00000004038) CDKL5 (ENSOANG00000004037) #15 RS1 (ENSOANG00000005828) #17 PPEF1 (ENSOANG00000004036) #18 ENSOANG00000038719 PHKA2 (ENSOANG00000004031) #19 ADGRG2 (ENSOANG00000004030) #20 ENSOANG00000004029 #22 MAP3K15 (ENSOANG00000004027) #23 SH3KBP1 (ENSOANG00000039084) #24 BCLAF3 (ENSOANG00000004022) #25 MAP7D2 (ENSOANG00000004016) #26 EIF1AX (ENSOANG00000048193) #27 RPS6KA3 (ENSOANG00000010658) #28 CNKSR2 (ENSOANG00000010656) #29 SMPX (ENSOANG00000038957) #31 MBTPS2 (ENSOANG00000044594) #32 SMS (ENSOANG00000010654) #33 PHEX (ENSOANG00000010653) #34 PTCHD1 (ENSOANG00000010652) #36 ENSOANG00000012275 #37 ACOT9 (ENSOANG00000012276) SAT1 (ENSOANG00000011507) Sauria ANCESTRAL SPECIES 2 ENSGT00530000064238 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Archelosauria ANCESTRAL SPECIES ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Archosauria ANCESTRAL SPECIES 2 ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Aves ANCESTRAL SPECIES ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Neognathae ANCESTRAL SPECIES 1 ENSGT00960000189398 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Neognathae_b ANCESTRAL SPECIES ENSGT00960000189398 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Passeriformes ANCESTRAL SPECIES 1 ENSGT00960000189398 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Passeriformes_d ANCESTRAL SPECIES 1 ENSGT01100000263512.b.b.a ENSGT00960000189398 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Passeriformes_g ANCESTRAL SPECIES 2 ENSGT01100000263512.b.b.a ENSGT00960000189398 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Passeroidea ANCESTRAL SPECIES 10 ENSGT00970000193372.a.a ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Common canary MODERN SPECIES 11 GRPR (ENSSCAG00000013590) CTPS2 (ENSSCAG00000013595) ENSSCAG00000013601 SYAP1 (ENSSCAG00000013603) TXLNG (ENSSCAG00000013606) RBBP7 (ENSSCAG00000013609) REPS2 (ENSSCAG00000013615) #7 NHS (ENSSCAG00000013628) #9 ENSSCAG00000013632 #12 SCML2 (ENSSCAG00000013642) #13 CDKL5 (ENSSCAG00000013673) #15 ENSSCAG00000013821 PPEF1 (ENSSCAG00000013826) #18 PHKA2 (ENSSCAG00000013844) #19 ADGRG2 (ENSSCAG00000013895) #20 ENSSCAG00000013917 #22 MAP3K15 (ENSSCAG00000013989) #23 SH3KBP1 (ENSSCAG00000014257) #24 BCLAF3 (ENSSCAG00000014318) #25 MAP7D2 (ENSSCAG00000014326) #26 ENSSCAG00000014338 #27 RPS6KA3 (ENSSCAG00000014654) #28 CNKSR2 (ENSSCAG00000015514) #29 KLHL34 (ENSSCAG00000015632) #30 SMPX (ENSSCAG00000015635) #31 MBTPS2 (ENSSCAG00000015638) #32 SMS (ENSSCAG00000015640) #33 PHEX (ENSSCAG00000015644) #34 PTCHD1 (ENSSCAG00000015647) #36 PRDX4 (ENSSCAG00000015650) #37 ACOT9 (ENSSCAG00000015654) Zebra finch MODERN SPECIES AP1S2 (ENSTGUG00000007944) GRPR (ENSTGUG00000007931) CTPS2 (ENSTGUG00000007883) SYAP1 (ENSTGUG00000007873) TXLNG (ENSTGUG00000007846) RBBP7 (ENSTGUG00000007826) REPS2 (ENSTGUG00000007806) #7 NHS (ENSTGUG00000007798) #9 ENSTGUG00000007795 #12 SCML2 (ENSTGUG00000007781) #13 CDKL5 (ENSTGUG00000007769) #15 RS1 (ENSTGUG00000007765) #17 PPEF1 (ENSTGUG00000007736) #18 PHKA2 (ENSTGUG00000007695) #19 ADGRG2 (ENSTGUG00000007677) #20 ENSTGUG00000007653 #22 MAP3K15 (ENSTGUG00000007599) #23 SH3KBP1 (ENSTGUG00000007550) #24 BCLAF3 (ENSTGUG00000007538) #25 MAP7D2 (ENSTGUG00000007527) #26 ENSTGUG00000007524 #27 RPS6KA3 (ENSTGUG00000007471) #28 CNKSR2 (ENSTGUG00000007450) #29 KLHL34 (ENSTGUG00000007449) #30 SMPX (ENSTGUG00000020200) #31 MBTPS2 (ENSTGUG00000007431) #32 SMS (ENSTGUG00000007411) #33 PHEX (ENSTGUG00000007352) #34 ENSTGUG00000029682 PTCHD1 (ENSTGUG00000021804) #36 PRDX4 (ENSTGUG00000007332) #37 Medium ground finch MODERN SPECIES 106 GRPR (ENSGFOG00000013539) ENSGFOG00000013537 CTPS2 (ENSGFOG00000013536) SYAP1 (ENSGFOG00000013528) TXLNG (ENSGFOG00000013522) RBBP7 (ENSGFOG00000013519) REPS2 (ENSGFOG00000013518) #7 NHS (ENSGFOG00000013516) #9 ENSGFOG00000013512 #12 SCML2 (ENSGFOG00000013508) #13 CDKL5 (ENSGFOG00000013485) #15 RS1 (ENSGFOG00000013477) #17 PPEF1 (ENSGFOG00000013473) #18 PHKA2 (ENSGFOG00000011321) #19 ADGRG2 (ENSGFOG00000011152) #20 ENSGFOG00000011142 #22 MAP3K15 (ENSGFOG00000010920) #23 SH3KBP1 (ENSGFOG00000010845) #24 BCLAF3 (ENSGFOG00000010815) #25 MAP7D2 (ENSGFOG00000010744) #26 EIF1AY (ENSGFOG00000010726) #27 RPS6KA3 (ENSGFOG00000010646) #28 Flycatcher MODERN SPECIES GRPR (ENSFALG00000004365) ENSFALG00000025554 CTPS2 (ENSFALG00000004352) SYAP1 (ENSFALG00000004339) TXLNG (ENSFALG00000004337) RBBP7 (ENSFALG00000004332) REPS2 (ENSFALG00000004325) #7 NHS (ENSFALG00000004320) #9 ENSFALG00000026988 #12 SCML2 (ENSFALG00000004312) #13 CDKL5 (ENSFALG00000004310) #15 ENSFALG00000004306 PPEF1 (ENSFALG00000004294) #18 PHKA2 (ENSFALG00000004289) #19 ADGRG2 (ENSFALG00000004273) #20 ENSFALG00000004262 #22 MAP3K15 (ENSFALG00000004253) #23 SH3KBP1 (ENSFALG00000004232) #24 BCLAF3 (ENSFALG00000004216) #25 ENSFALG00000025070 #26 ENSFALG00000026313 #26 ENSFALG00000026702 EIF1AX (ENSFALG00000023239) #27 RPS6KA3 (ENSFALG00000004203) #28 CNKSR2 (ENSFALG00000004197) #29 KLHL34 (ENSFALG00000004192) #30 SMPX (ENSFALG00000004189) #31 SMS (ENSFALG00000004178) #33 PHEX (ENSFALG00000004174) #34 PTCHD1 (ENSFALG00000004172) #36 PRDX4 (ENSFALG00000026461) #37 Great tit MODERN SPECIES SYAP1 (ENSPMJG00000011481) ENSPMJG00000011480 TXLNG (ENSPMJG00000011479) RBBP7 (ENSPMJG00000011322) REPS2 (ENSPMJG00000011320) #7 NHS (ENSPMJG00000011314) #9 ENSPMJG00000011313 ENSPMJG00000011312 #12 RAI2 (ENSPMJG00000011309) #11 SCML2 (ENSPMJG00000011308) #13 CDKL5 (ENSPMJG00000011307) #15 ENSPMJG00000011306 PPEF1 (ENSPMJG00000011305) #18 PHKA2 (ENSPMJG00000011304) #19 ADGRG2 (ENSPMJG00000011302) #20 ENSPMJG00000011299 #22 MAP3K15 (ENSPMJG00000011298) #23 SH3KBP1 (ENSPMJG00000011295) #24 BCLAF3 (ENSPMJG00000011294) #25 MAP7D2 (ENSPMJG00000011293) #26 EIF1AX (ENSPMJG00000011291) #27 RPS6KA3 (ENSPMJG00000011290) #28 CNKSR2 (ENSPMJG00000011285) #29 ENSPMJG00000011284 #30 SMPX (ENSPMJG00000011283) #31 MBTPS2 (ENSPMJG00000011282) #32 SMS (ENSPMJG00000011240) #33 PHEX (ENSPMJG00000011239) #34 ENSPMJG00000011235 #36 ENSPMJG00000011234 ENSPMJG00000011233 #36 Neognathae_c ANCESTRAL SPECIES 4 ENSGT00970000193372.a.a ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Kakapo DUPLICATION Kakapo MODERN SPECIES 11 GRPR (ENSSHBG00005019105) CTPS2 (ENSSHBG00005019102) SYAP1 (ENSSHBG00005019100) TXLNG (ENSSHBG00005019098) RBBP7 (ENSSHBG00005019094) REPS2 (ENSSHBG00005019091) #7 NHS (ENSSHBG00005019088) #9 ENSSHBG00005019087 #12 RAI2 (ENSSHBG00005019085) #11 SCML2 (ENSSHBG00005019081) #13 CDKL5 (ENSSHBG00005019079) #15 ENSSHBG00005019076 ENSSHBG00005019074 #18 PHKA2 (ENSSHBG00005019048) #19 ADGRG2 (ENSSHBG00005019028) #20 ENSSHBG00005019023 #22 ENSSHBG00005018975 #22 ENSSHBG00005018967 #23 ENSSHBG00005018962 #23 SH3KBP1 (ENSSHBG00005018133) #24 BCLAF3 (ENSSHBG00005018091) #25 MAP7D2 (ENSSHBG00005018085) #26 EIF1AY (ENSSHBG00005018079) #27 RPS6KA3 (ENSSHBG00005007492) #28 CNKSR2 (ENSSHBG00005006684) #29 KLHL34 (ENSSHBG00005006628) #30 SMPX (ENSSHBG00005006614) #31 MBTPS2 (ENSSHBG00005006593) #32 SMS (ENSSHBG00005006564) #33 PHEX (ENSSHBG00005006528) #34 PTCHD1 (ENSSHBG00005006504) #36 Kakapo MODERN SPECIES 11 CTPS2 (ENSSHBG00005019102) SYAP1 (ENSSHBG00005019100) TXLNG (ENSSHBG00005019098) RBBP7 (ENSSHBG00005019094) REPS2 (ENSSHBG00005019091) #7 NHS (ENSSHBG00005019088) #9 ENSSHBG00005019087 #12 RAI2 (ENSSHBG00005019085) #11 SCML2 (ENSSHBG00005019081) #13 CDKL5 (ENSSHBG00005019079) #15 ENSSHBG00005019076 ENSSHBG00005019074 #18 PHKA2 (ENSSHBG00005019048) #19 ADGRG2 (ENSSHBG00005019028) #20 ENSSHBG00005019023 #22 ENSSHBG00005018975 #22 ENSSHBG00005018967 #23 ENSSHBG00005018962 #23 SH3KBP1 (ENSSHBG00005018133) #24 BCLAF3 (ENSSHBG00005018091) #25 MAP7D2 (ENSSHBG00005018085) #26 EIF1AY (ENSSHBG00005018079) #27 RPS6KA3 (ENSSHBG00005007492) #28 CNKSR2 (ENSSHBG00005006684) #29 KLHL34 (ENSSHBG00005006628) #30 SMPX (ENSSHBG00005006614) #31 MBTPS2 (ENSSHBG00005006593) #32 SMS (ENSSHBG00005006564) #33 PHEX (ENSSHBG00005006528) #34 PTCHD1 (ENSSHBG00005006504) #36 PRDX4 (ENSSHBG00005006485) #37 Golden eagle MODERN SPECIES 23 RAI2 (ENSACCG00020004428) #11 SCML2 (ENSACCG00020004422) #13 CDKL5 (ENSACCG00020004398) #15 ENSACCG00020004392 PPEF1 (ENSACCG00020004379) #18 PHKA2 (ENSACCG00020004342) #19 ADGRG2 (ENSACCG00020004309) #20 ENSACCG00020004280 #22 MAP3K15 (ENSACCG00020004243) #23 SH3KBP1 (ENSACCG00020004130) #24 BCLAF3 (ENSACCG00020003922) #25 MAP7D2 (ENSACCG00020003899) #26 EIF1AY (ENSACCG00020003868) #27 ENSACCG00020003833 #28 CNKSR2 (ENSACCG00020003793) #29 KLHL34 (ENSACCG00020003780) #30 SMPX (ENSACCG00020003772) #31 MBTPS2 (ENSACCG00020003760) #32 SMS (ENSACCG00020003730) #33 PHEX (ENSACCG00020003703) #34 ENSACCG00020003681 #36 ENSACCG00020003664 #36 ENSACCG00020003657 #36 Galloanserae ANCESTRAL SPECIES 1 ENSGT00960000189398 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Anatidae ANCESTRAL SPECIES 58 ENSGT00960000189398 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 Pink-footed goose MODERN SPECIES 42 CTPS2 (ENSABRG00000010258) SYAP1 (ENSABRG00000010245) TXLNG (ENSABRG00000010232) RBBP7 (ENSABRG00000010224) REPS2 (ENSABRG00000010203) #7 NHS (ENSABRG00000010185) #9 ENSABRG00000010171 #12 SCML2 (ENSABRG00000010136) #13 CDKL5 (ENSABRG00000010091) #15 RS1 (ENSABRG00000010078) #17 ENSABRG00000010075 #18 PHKA2 (ENSABRG00000005409) #19 ADGRG2 (ENSABRG00000005170) #20 ENSABRG00000005155 ENSABRG00000005147 ENSABRG00000005131 #22 MAP3K15 (ENSABRG00000005057) #23 SH3KBP1 (ENSABRG00000003049) #24 BCLAF3 (ENSABRG00000002929) #25 MAP7D2 (ENSABRG00000002715) #26 EIF1AX (ENSABRG00000002642) #27 Duck MODERN SPECIES ENSAPLG00000020855 CTPS2 (ENSAPLG00000012743) SYAP1 (ENSAPLG00000012524) TXLNG (ENSAPLG00000012324) RBBP7 (ENSAPLG00000011785) REPS2 (ENSAPLG00000011221) #7 NHS (ENSAPLG00000011104) #9 ENSAPLG00000030010 #12 RAI2 (ENSAPLG00000026209) #11 SCML2 (ENSAPLG00000010725) #13 CDKL5 (ENSAPLG00000010656) #15 RS1 (ENSAPLG00000010522) #17 PPEF1 (ENSAPLG00000010050) #18 PHKA2 (ENSAPLG00000009522) #19 ADGRG2 (ENSAPLG00000008909) #20 ENSAPLG00000008450 #22 MAP3K15 (ENSAPLG00000007410) #23 SH3KBP1 (ENSAPLG00000007164) #24 BCLAF3 (ENSAPLG00000005332) #25 MAP7D2 (ENSAPLG00000005077) #26 EIF1AX (ENSAPLG00000029362) #27 FAM3B (ENSAPLG00000015920) MX1 (ENSAPLG00000015976) TMPRSS2 (ENSAPLG00000016160) RIPK4 (ENSAPLG00000016253) ENSAPLG00000001186 PRDM15 (ENSAPLG00000001239) C2CD2 (ENSAPLG00000001983) ZBTB21 (ENSAPLG00000000767) ENSAPLG00000002409 ABCG1 (ENSAPLG00000008841) Phasianidae ANCESTRAL SPECIES ENSGT00960000189398 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Phasianidae_b ANCESTRAL SPECIES ENSGT00960000189398 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Chicken MODERN SPECIES CTPS2 (ENSGALG00010001691) SYAP1 (ENSGALG00010001678) TXLNG (ENSGALG00010002402) RBBP7 (ENSGALG00010002400) ENSGALG00010002394 REPS2 (ENSGALG00010002391) #7 NHS (ENSGALG00010002379) #9 ENSGALG00010002370 #12 RAI2 (ENSGALG00010002365) #11 SCML2 (ENSGALG00010002345) #13 CDKL5 (ENSGALG00010002161) #15 RS1 (ENSGALG00010003040) #17 PPEF1 (ENSGALG00010003030) #18 PHKA2 (ENSGALG00010003002) #19 ADGRG2 (ENSGALG00010002957) #20 PDHA2 (ENSGALG00010002929) #22 MAP3K15 (ENSGALG00010002883) #23 ENSGALG00010002869 SH3KBP1 (ENSGALG00010002809) #24 CXorf23 (ENSGALG00010002790) #25 MAP7D2 (ENSGALG00010002765) #26 EIF1AX (ENSGALG00010002653) #27 RPS6KA3 (ENSGALG00010002592) #28 CNKSR2 (ENSGALG00010001918) #29 KLHL34 (ENSGALG00010001890) #30 SMPX (ENSGALG00010001885) #31 MBTPS2 (ENSGALG00010003275) #32 SMS (ENSGALG00010003268) #33 PHEX (ENSGALG00010003252) #34 ENSGALG00010003247 #36 PRDX4 (ENSGALG00010003214) #37 Turkey MODERN SPECIES ENSMGAG00000020081 #34 ENSMGAG00000014656 #34 ENSMGAG00000014657 #33 ENSMGAG00000014659 #31 ENSMGAG00000014661 #30 ENSMGAG00000014662 #29 ENSMGAG00000020891 ENSMGAG00000020398 #29 ENSMGAG00000014663 #28 ENSMGAG00000014664 #27 ENSMGAG00000014665 #26 ENSMGAG00000014666 #25 ENSMGAG00000018972 ENSMGAG00000014667 #24 ENSMGAG00000014668 #23 ENSMGAG00000014669 #22 ENSMGAG00000021924 #23 ADGRG2 (ENSMGAG00000014670) #20 ENSMGAG00000016590 #19 ENSMGAG00000014673 ENSMGAG00000014672 #18 ENSMGAG00000014671 #19 ENSMGAG00000014674 #15 ENSMGAG00000014675 #13 ENSMGAG00000021746 ENSMGAG00000014681 #9 ENSMGAG00000018381 ENSMGAG00000014682 #7 ENSMGAG00000014683 ENSMGAG00000014684 ENSMGAG00000022701 Japanese quail MODERN SPECIES GRPR (ENSCJPG00005018115) CTPS2 (ENSCJPG00005017894) SYAP1 (ENSCJPG00005017893) TXLNG (ENSCJPG00005017892) ENSCJPG00005017891 REPS2 (ENSCJPG00005017890) #7 NHS (ENSCJPG00005017889) #9 ENSCJPG00005017888 #12 RAI2 (ENSCJPG00005017887) #11 SCML2 (ENSCJPG00005017884) #13 CDKL5 (ENSCJPG00005017882) #15 RS1 (ENSCJPG00005017881) #17 PPEF1 (ENSCJPG00005017880) #18 PHKA2 (ENSCJPG00005017878) #19 ADGRG2 (ENSCJPG00005017848) #20 ENSCJPG00005017845 #22 MAP3K15 (ENSCJPG00005017843) #23 SH3KBP1 (ENSCJPG00005017358) #24 BCLAF3 (ENSCJPG00005017348) #25 ARX (ENSCJPG00005017313) POLA1 (ENSCJPG00005017303) PCYT1B (ENSCJPG00005017302) PDK3 (ENSCJPG00005017269) ENSCJPG00005017268 ENSCJPG00005017267 ENSCJPG00005017265 KLHL15 (ENSCJPG00005017264) APOO (ENSCJPG00005017263) SAT1 (ENSCJPG00005017262) ACOT9 (ENSCJPG00005017261) PRDX4 (ENSCJPG00005017260) #37 African ostrich MODERN SPECIES 411 GRPR (ENSSCUG00000007599) CTPS2 (ENSSCUG00000007604) SYAP1 (ENSSCUG00000007615) TXLNG (ENSSCUG00000007623) RBBP7 (ENSSCUG00000007625) REPS2 (ENSSCUG00000007629) #7 NHS (ENSSCUG00000007632) #9 ENSSCUG00000007636 #12 ENSSCUG00000007641 SCML2 (ENSSCUG00000007645) #13 CDKL5 (ENSSCUG00000007652) #15 ENSSCUG00000007656 PPEF1 (ENSSCUG00000007662) #18 PHKA2 (ENSSCUG00000007679) #19 ADGRG2 (ENSSCUG00000007691) #20 ENSSCUG00000007704 #22 MAP3K15 (ENSSCUG00000007712) #23 SH3KBP1 (ENSSCUG00000007720) #24 BCLAF3 (ENSSCUG00000007724) #25 MAP7D2 (ENSSCUG00000007734) #26 EIF1AY (ENSSCUG00000007738) #27 RPS6KA3 (ENSSCUG00000007740) #28 Australian saltwater crocodile MODERN SPECIES 27 CTPS2 (ENSCPRG00005005530) SYAP1 (ENSCPRG00005005518) TXLNG (ENSCPRG00005005436) RBBP7 (ENSCPRG00005005235) REPS2 (ENSCPRG00005005208) #7 NHS (ENSCPRG00005005178) #9 ENSCPRG00005005174 #12 RAI2 (ENSCPRG00005005138) #11 SCML2 (ENSCPRG00005005129) #13 ENSCPRG00005005124 CDKL5 (ENSCPRG00005005093) #15 ENSCPRG00005005070 PPEF1 (ENSCPRG00005005055) #18 PHKA2 (ENSCPRG00005005007) #19 ADGRG2 (ENSCPRG00005004970) #20 ENSCPRG00005004929 #22 MAP3K15 (ENSCPRG00005004759) #23 SH3KBP1 (ENSCPRG00005004278) #24 BCLAF3 (ENSCPRG00005004205) #25 MAP7D2 (ENSCPRG00005004181) #26 EIF1AY (ENSCPRG00005004137) #27 RPS6KA3 (ENSCPRG00005004126) #28 CNKSR2 (ENSCPRG00005004095) #29 KLHL34 (ENSCPRG00005004072) #30 SMPX (ENSCPRG00005004068) #31 MBTPS2 (ENSCPRG00005004052) #32 SMS (ENSCPRG00005004044) #33 PHEX (ENSCPRG00005003998) #34 ENSCPRG00005003970 #36 ENSCPRG00005003968 #36 PRDX4 (ENSCPRG00005003960) #37 Cryptodira ANCESTRAL SPECIES ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Testudinoidea ANCESTRAL SPECIES 1 ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b.a #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.a #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Emydidae ANCESTRAL SPECIES 28 ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b.a #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 6 ENSTMTG00000008135 ENSTMTG00000008147 ENSTMTG00000008186 ENSTMTG00000008203 ENSTMTG00000008218 ENSTMTG00000008248 #7 ENSTMTG00000008268 #9 ENSTMTG00000008320 #12 ENSTMTG00000008340 #11 ENSTMTG00000008358 #13 ENSTMTG00000008455 #15 ENSTMTG00000008487 ENSTMTG00000008539 #18 ENSTMTG00000008930 #19 ENSTMTG00000010552 #20 ENSTMTG00000010673 #22 ENSTMTG00000010871 #23 ENSTMTG00000012121 #24 ENSTMTG00000012334 #25 ENSTMTG00000012414 #26 ENSTMTG00000012505 #27 ENSTMTG00000013119 #28 ENSTMTG00000020397 #29 ENSTMTG00000020818 #30 ENSTMTG00000020839 #31 ENSTMTG00000020853 #32 ENSTMTG00000020859 #33 ENSTMTG00000020869 #34 ENSTMTG00000020902 #36 ENSTMTG00000020909 #36 ENSTMTG00000020913 #37 Three-toed box turtle MODERN SPECIES 5 ENSTMTG00000002749 ENSTMTG00000002754 ENSTMTG00000002757 ENSTMTG00000002782 ENSTMTG00000002824 ENSTMTG00000002839 ENSTMTG00000002850 #7 ENSTMTG00000002860 #9 ENSTMTG00000002881 #11 ENSTMTG00000002891 #13 ENSTMTG00000002920 #15 ENSTMTG00000002935 ENSTMTG00000002941 #18 ENSTMTG00000003024 #19 ENSTMTG00000004327 #20 ENSTMTG00000004440 #22 ENSTMTG00000004603 #23 ENSTMTG00000004705 #24 ENSTMTG00000004814 #25 ENSTMTG00000004847 #26 ENSTMTG00000005010 #27 ENSTMTG00000005717 #28 ENSTMTG00000016148 #29 ENSTMTG00000017830 #30 ENSTMTG00000017855 #31 ENSTMTG00000017886 #32 ENSTMTG00000018067 #33 ENSTMTG00000018074 #34 ENSTMTG00000018114 #36 ENSTMTG00000018119 #36 ENSTMTG00000018125 #37 painted turtle MODERN SPECIES 736 ACOT9 (ENSCPBG00000006727) SAT1 (ENSCPBG00000006749) APOO (ENSCPBG00000006759) ENSCPBG00000006769 KLHL15 (ENSCPBG00000006784) ENSCPBG00000006795 ENSCPBG00000006809 ENSCPBG00000006822 SCML2 (ENSCPBG00000006826) #13 CDKL5 (ENSCPBG00000006856) #15 RS1 (ENSCPBG00000006888) #17 PPEF1 (ENSCPBG00000006896) #18 PHKA2 (ENSCPBG00000006946) #19 ADGRG2 (ENSCPBG00000007007) #20 ENSCPBG00000007039 ENSCPBG00000007047 #22 MAP3K15 (ENSCPBG00000007064) #23 SH3KBP1 (ENSCPBG00000007082) #24 BCLAF3 (ENSCPBG00000007103) #25 ENSCPBG00000007121 #26 ENSCPBG00000007124 #26 NHS (ENSCPBG00000007162) #9 ENSCPBG00000007197 #12 Testudinidae ANCESTRAL SPECIES ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b.a #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.b #27 ENSGT01030000235848 ENSGT00390000008256.a #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 Abingdon island giant tortoise MODERN SPECIES 585 ENSCABG00000001623 #22 MAP3K15 (ENSCABG00000001631) #23 SH3KBP1 (ENSCABG00000001638) #24 ENSCABG00000001643 #25 MAP7D2 (ENSCABG00000001649) #26 EIF1AY (ENSCABG00000001672) #27 ENSCABG00000001679 ZFPM2 (ENSCABG00000001690) Goode s thornscrub tortoise MODERN SPECIES GRPR (ENSGEVG00005000462) CTPS2 (ENSGEVG00005000517) SYAP1 (ENSGEVG00005000626) TXLNG (ENSGEVG00005000647) RBBP7 (ENSGEVG00005000675) REPS2 (ENSGEVG00005000696) #7 NHS (ENSGEVG00005000729) #9 ENSGEVG00005000765 #12 RAI2 (ENSGEVG00005000801) #11 SCML2 (ENSGEVG00005000816) #13 CDKL5 (ENSGEVG00005000847) #15 RS1 (ENSGEVG00005000877) #17 PPEF1 (ENSGEVG00005000898) #18 PHKA2 (ENSGEVG00005001251) #19 ADGRG2 (ENSGEVG00005001856) #20 ENSGEVG00005001923 #22 ENSGEVG00005001952 MAP3K15 (ENSGEVG00005002034) #23 SH3KBP1 (ENSGEVG00005002292) #24 BCLAF3 (ENSGEVG00005002402) #25 MAP7D2 (ENSGEVG00005002440) #26 EIF1AY (ENSGEVG00005002462) #27 RPS6KA3 (ENSGEVG00005002477) #28 CNKSR2 (ENSGEVG00005002617) #29 KLHL34 (ENSGEVG00005002967) #30 SMPX (ENSGEVG00005002981) #31 MBTPS2 (ENSGEVG00005002992) #32 SMS (ENSGEVG00005003013) #33 PHEX (ENSGEVG00005003058) #34 ENSGEVG00005003120 #36 ENSGEVG00005003126 #36 Chinese turtle MODERN SPECIES 313 ENSPSIG00000000360 REPS2 (ENSPSIG00000010677) #7 NHS (ENSPSIG00000011334) #9 RAI2 (ENSPSIG00000000365) #11 SCML2 (ENSPSIG00000012323) #13 CDKL5 (ENSPSIG00000012675) #15 RS1 (ENSPSIG00000012874) #17 PPEF1 (ENSPSIG00000013970) #18 PHKA2 (ENSPSIG00000016335) #19 ADGRG2 (ENSPSIG00000006325) #20 ENSPSIG00000006459 #22 MAP3K15 (ENSPSIG00000009589) #23 Lepidosauria ANCESTRAL SPECIES 4 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT01040000244463 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Episquamata ANCESTRAL SPECIES 2 ENSGT01100000263512.b.b.a ENSGT00530000064238 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370.j #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Laterata ANCESTRAL SPECIES ENSGT01100000263512.b.b.a ENSGT00530000064238 ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000163807 #12 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370.j #28 ENSGT00940000159370.i.b #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 Common wall lizard MODERN SPECIES 12 GRPR (ENSPMRG00000006974) S100G (ENSPMRG00000006967) SYAP1 (ENSPMRG00000006946) CTPS2 (ENSPMRG00000006901) TXLNG (ENSPMRG00000006878) REPS2 (ENSPMRG00000006859) #7 NHS (ENSPMRG00000006823) #9 ENSPMRG00000006808 #12 RAI2 (ENSPMRG00000006796) #11 SCML2 (ENSPMRG00000006773) #13 CDKL5 (ENSPMRG00000006763) #15 ENSPMRG00000006751 PPEF1 (ENSPMRG00000006648) #18 PHKA2 (ENSPMRG00000002101) #19 ADGRG2 (ENSPMRG00000000590) #20 ENSPMRG00000000391 #22 MAP3K15 (ENSPMRG00000007498) #23 SH3KBP1 (ENSPMRG00000007049) #24 ENSPMRG00000006968 #25 MAP7D2 (ENSPMRG00000006925) #26 ENSPMRG00000006905 #27 RPS6KA3 (ENSPMRG00000005784) #28 ENSPMRG00000005565 CNKSR2 (ENSPMRG00000004735) #29 KLHL34 (ENSPMRG00000004569) #30 SMPX (ENSPMRG00000004564) #31 MBTPS2 (ENSPMRG00000004556) #32 SMS (ENSPMRG00000004545) #33 PHEX (ENSPMRG00000004498) #34 PTCHD1 (ENSPMRG00000004487) #36 PRDX4 (ENSPMRG00000004476) #37 Argentine black and white tegu MODERN SPECIES GRPR (ENSSMRG00000022600) CTPS2 (ENSSMRG00000022601) SYAP1 (ENSSMRG00000022602) TXLNG (ENSSMRG00000022603) REPS2 (ENSSMRG00000022604) #7 NHS (ENSSMRG00000022606) #9 ENSSMRG00000022608 #12 ENSSMRG00000022609 #12 RAI2 (ENSSMRG00000022610) #11 SCML2 (ENSSMRG00000022611) #13 CDKL5 (ENSSMRG00000022612) #15 RS1 (ENSSMRG00000022613) #17 PPEF1 (ENSSMRG00000022614) #18 PHKA2 (ENSSMRG00000022615) #19 ADGRG2 (ENSSMRG00000022616) #20 ENSSMRG00000022619 #22 MAP3K15 (ENSSMRG00000022620) #23 SH3KBP1 (ENSSMRG00000022685) #24 BCLAF3 (ENSSMRG00000022709) #25 MAP7D2 (ENSSMRG00000022712) #26 EIF1AX (ENSSMRG00000022713) #27 ENSSMRG00000022727 #28 CNKSR2 (ENSSMRG00000022817) #29 ENSSMRG00000022818 #30 SMPX (ENSSMRG00000022819) #31 MBTPS2 (ENSSMRG00000022820) #32 SMS (ENSSMRG00000022821) #33 PHEX (ENSSMRG00000022822) #34 PTCHD1 (ENSSMRG00000022824) #36 PRDX4 (ENSSMRG00000022825) #37 ACOT9 (ENSSMRG00000022826) Toxicofera ANCESTRAL SPECIES 2 ENSGT00950000183152.A ENSGT00970000193372.a.a ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370.j #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Elapidae ANCESTRAL SPECIES 13 ENSGT00950000183152.A ENSGT00970000193372.a.a ENSGT01100000263512.b.b.a.b ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886.a #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370.j.b #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Elapidae_a ANCESTRAL SPECIES 16 ENSGT00950000183152.A ENSGT00970000193372.a.a ENSGT01100000263512.b.b.a.b ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886.a #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370.j.b #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Acanthophiinae ANCESTRAL SPECIES 21 ENSGT00950000183152.A ENSGT00970000193372.a.a ENSGT01100000263512.b.b.a.b ENSGT00910000144179.b.a ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000158080 #7 ENSGT00950000182963.b.a #9 ENSGT00940000154164.d #11 ENSGT00940000159407 #13 ENSGT00940000157355 #15 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886.a #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370.j.b #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Mainland tiger snake MODERN SPECIES 67 ZRSR2 (ENSNSUG00000012797) ENSNSUG00000012796 GRPR (ENSNSUG00000012795) SYAP1 (ENSNSUG00000012794) CTPS2 (ENSNSUG00000012793) TXLNG (ENSNSUG00000012789) REPS2 (ENSNSUG00000012787) #7 NHS (ENSNSUG00000012782) #9 RAI2 (ENSNSUG00000012779) #11 SCML2 (ENSNSUG00000012778) #13 CDKL5 (ENSNSUG00000012777) #15 RS1 (ENSNSUG00000012776) #17 PPEF1 (ENSNSUG00000012746) #18 ENSNSUG00000012744 #19 ADGRG2 (ENSNSUG00000012742) #20 ENSNSUG00000012740 #22 MAP3K15 (ENSNSUG00000012661) #23 SH3KBP1 (ENSNSUG00000012391) #24 BCLAF3 (ENSNSUG00000012389) #25 ENSNSUG00000012387 #26 ENSNSUG00000012386 #26 ENSNSUG00000012384 #27 RPS6KA3 (ENSNSUG00000012329) #28 CNKSR2 (ENSNSUG00000011963) #29 KLHL34 (ENSNSUG00000011953) #30 SMPX (ENSNSUG00000011952) #31 MBTPS2 (ENSNSUG00000011951) #32 SMS (ENSNSUG00000011950) #33 PHEX (ENSNSUG00000011949) #34 ENSNSUG00000011948 #36 ENSNSUG00000011947 #36 Eastern brown snake MODERN SPECIES 68 ZRSR2 (ENSPTXG00000005824) AP1S2 (ENSPTXG00000005825) GRPR (ENSPTXG00000005826) CTPS2 (ENSPTXG00000005827) SYAP1 (ENSPTXG00000005828) TXLNG (ENSPTXG00000005829) REPS2 (ENSPTXG00000005830) #7 NHS (ENSPTXG00000005831) #9 RAI2 (ENSPTXG00000005832) #11 ENSPTXG00000005833 #13 CDKL5 (ENSPTXG00000005834) #15 RS1 (ENSPTXG00000005836) #17 PPEF1 (ENSPTXG00000005838) #18 PHKA2 (ENSPTXG00000005919) #19 ADGRG2 (ENSPTXG00000006028) #20 ENSPTXG00000006031 #22 MAP3K15 (ENSPTXG00000006040) #23 SH3KBP1 (ENSPTXG00000006343) #24 BCLAF3 (ENSPTXG00000006385) #25 MAP7D2 (ENSPTXG00000006388) #26 ENSPTXG00000006389 #27 RPS6KA3 (ENSPTXG00000006391) #28 CNKSR2 (ENSPTXG00000006394) #29 KLHL34 (ENSPTXG00000007069) #30 SMPX (ENSPTXG00000007070) #31 MBTPS2 (ENSPTXG00000007071) #32 SMS (ENSPTXG00000007072) #33 PHEX (ENSPTXG00000007074) #34 ENSPTXG00000007076 ENSPTXG00000007077 #36 ENSPTXG00000007078 #36 Blue-lipped sea krait MODERN SPECIES 3879 ENSLLTG00000014040 #22 ENSLLTG00000014033 #23 Indian cobra MODERN SPECIES 5 ZRSR2 (ENSNNAG00000016467) AP1S2 (ENSNNAG00000016462) ENSNNAG00000016420 SYAP1 (ENSNNAG00000016412) CTPS2 (ENSNNAG00000016371) TXLNG (ENSNNAG00000016235) REPS2 (ENSNNAG00000016184) #7 NHS (ENSNNAG00000016137) #9 RAI2 (ENSNNAG00000016127) #11 SCML2 (ENSNNAG00000016034) #13 CDKL5 (ENSNNAG00000015926) #15 RS1 (ENSNNAG00000015902) #17 PPEF1 (ENSNNAG00000015798) #18 PHKA2 (ENSNNAG00000013955) #19 ADGRG2 (ENSNNAG00000013659) #20 ENSNNAG00000013584 #22 ENSNNAG00000013560 #23 ENSNNAG00000013538 #23 SH3KBP1 (ENSNNAG00000013422) #24 BCLAF3 (ENSNNAG00000013397) #25 MAP7D2 (ENSNNAG00000013341) #26 ENSNNAG00000013320 #27 RPS6KA3 (ENSNNAG00000012085) #28 CNKSR2 (ENSNNAG00000010893) #29 ENSNNAG00000010819 #30 SMPX (ENSNNAG00000010781) #31 MBTPS2 (ENSNNAG00000010623) #32 SMS (ENSNNAG00000010591) #33 PHEX (ENSNNAG00000010440) #34 ENSNNAG00000010387 #36 PRDX4 (ENSNNAG00000010298) #37 Lizard MODERN SPECIES 2 SYAP1 (ENSACAG00000011393) TXLNG (ENSACAG00000011478) REPS2 (ENSACAG00000011590) #7 ENSACAG00000042988 ENSACAG00000042642 ENSACAG00000042117 NHS (ENSACAG00000011634) #9 ENSACAG00000040842 ENSACAG00000011661 #11 SCML2 (ENSACAG00000011680) #13 CDKL5 (ENSACAG00000011708) #15 ENSACAG00000011736 PPEF1 (ENSACAG00000011757) #18 PHKA2 (ENSACAG00000011798) #19 ADGRG2 (ENSACAG00000011948) #20 ENSACAG00000012190 #22 MAP3K15 (ENSACAG00000012298) #23 SH3KBP1 (ENSACAG00000012504) #24 ENSACAG00000040558 ENSACAG00000042897 BCLAF3 (ENSACAG00000012584) #25 MAP7D2 (ENSACAG00000012609) #26 ENSACAG00000012660 #27 ENSACAG00000012681 #28 ENSACAG00000035874 CNKSR2 (ENSACAG00000025299) #29 KLHL34 (ENSACAG00000016729) #30 SMPX (ENSACAG00000016732) #31 MBTPS2 (ENSACAG00000016735) #32 ENSACAG00000040170 ENSACAG00000016737 #33 tuatara MODERN SPECIES 196 ENSSPUG00000017772 CTPS2 (ENSSPUG00000017782) ENSSPUG00000017794 SYAP1 (ENSSPUG00000017802) TXLNG (ENSSPUG00000017809) RBBP7 (ENSSPUG00000017820) REPS2 (ENSSPUG00000017827) #7 ENSSPUG00000017869 #12 SCML2 (ENSSPUG00000017922) #13 CDKL5 (ENSSPUG00000018011) #15 ENSSPUG00000018108 PPEF1 (ENSSPUG00000018122) #18 PHKA2 (ENSSPUG00000018218) #19 ADGRG2 (ENSSPUG00000018353) #20 ENSSPUG00000018366 #22 MAP3K15 (ENSSPUG00000018390) #23 SH3KBP1 (ENSSPUG00000018416) #24 BCLAF3 (ENSSPUG00000018428) #25 MAP7D2 (ENSSPUG00000018461) #26 EIF1AY (ENSSPUG00000018499) #27 RPS6KA3 (ENSSPUG00000018513) #28 CNKSR2 (ENSSPUG00000018596) #29 ENSSPUG00000018663 SMPX (ENSSPUG00000018668) #31 MBTPS2 (ENSSPUG00000018676) #32 SMS (ENSSPUG00000018687) #33 PHEX (ENSSPUG00000018709) #34 ENSSPUG00000018743 ENSSPUG00000018750 #36 ENSSPUG00000018753 #36 Anura ANCESTRAL SPECIES 187 ENSGT00940000157355.g #15 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Frog MODERN SPECIES 2 hsf5 (ENSXETG00000033030) rnf43 (ENSXETG00000037241) supt4h1 (ENSXETG00000040160) ENSXETG00000048486 tspoap1 (ENSXETG00000034008) mpo (ENSXETG00000007787) gdpd1 (ENSXETG00000007786) zfx (ENSXETG00000007785) adamts3 (ENSXETG00000006225) acot9 (ENSXETG00000006223) arsd (ENSXETG00000006221) sat1 (ENSXETG00000006219) apoo (ENSXETG00000006218) cxorf58 (ENSXETG00000025336) klhl15 (ENSXETG00000034785) atg16l2 (ENSXETG00000006212) #22 map3k15 (ENSXETG00000006210) #23 sh3kbp1 (ENSXETG00000006205) #24 ENSXETG00000048959 bclaf3 (ENSXETG00000031425) #25 map7d2 (ENSXETG00000006203) #26 eif1ax (ENSXETG00000034472) #27 ENSXETG00000039947 rps6ka3 (ENSXETG00000010285) #28 cnksr2 (ENSXETG00000010286) #29 ENSXETG00000043747 klhl34 (ENSXETG00000003854) #30 smpx (ENSXETG00000032462) #31 mbtps2 (ENSXETG00000025771) #32 sms (ENSXETG00000003857) #33 phex (ENSXETG00000038825) #34 Leishan spiny toad MODERN SPECIES 5 POLA1 (ENSLLEG00000003828) PCYT1B (ENSLLEG00000003773) PDK3 (ENSLLEG00000003751) ENSLLEG00000003744 ENSLLEG00000003739 CDKL5 (ENSLLEG00000003678) #15 ENSLLEG00000003654 ENSLLEG00000003641 ENSLLEG00000003634 PPEF1 (ENSLLEG00000003604) #18 ENSLLEG00000003593 PHKA2 (ENSLLEG00000003359) #19 ENSLLEG00000003325 ADGRG2 (ENSLLEG00000003267) #20 ENSLLEG00000003249 ENSLLEG00000003143 #22 MAP3K15 (ENSLLEG00000003042) #23 ENSLLEG00000003017 SH3KBP1 (ENSLLEG00000002987) #24 ENSLLEG00000002975 BCLAF3 (ENSLLEG00000002957) #25 ENSLLEG00000002949 MAP7D2 (ENSLLEG00000002847) #26 ENSLLEG00000002796 #27 ENSLLEG00000002780 ENSLLEG00000002775 RPS6KA3 (ENSLLEG00000001162) #28 ENSLLEG00000000962 CNKSR2 (ENSLLEG00000000621) #29 KLHL34 (ENSLLEG00000000544) #30 SMPX (ENSLLEG00000000522) #31 Coelacanth MODERN SPECIES 697 GRPR (ENSLACG00000001274) ADGRG2 (ENSLACG00000007443) #20 pdha1b (ENSLACG00000010769) #22 MAP3K15 (ENSLACG00000011038) #23 ENSLACG00000012638 SH3KBP1 (ENSLACG00000012761) #24 BCLAF3 (ENSLACG00000014449) #25 b4galt4 (ENSLACG00000014768) MAP7D2 (ENSLACG00000015065) #26 EIF1AX (ENSLACG00000015565) #27 Actinopterygii ANCESTRAL SPECIES 26 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000153430.a.a #37 ENSGT00390000005330 Neopterygii ANCESTRAL SPECIES 55 ENSGT00940000155717 ENSGT00390000011053 ENSGT00640000091497.a ENSGT01050000244950.a.a.a ENSGT00440000034309 ENSGT01050000244868 ENSGT00940000164731 ENSGT00550000074801 ENSGT00940000159116 ENSGT00940000167353 ENSGT00530000063666.b ENSGT00950000183121.b.b.b.b ENSGT00950000185751 ENSGT00390000005330 ENSGT00940000153430.a.a #37 ENSGT00530000063174.a #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT00940000164851 ENSGT00940000159906 ENSGT00940000163670 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000162182 Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 99 ENSGT00440000034309 ENSGT01050000244868 ENSGT00940000164731 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00950000185751 ENSGT00390000005330 ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.l #22 ENSGT00940000159370 #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00530000063174.a.k #22 Osteoglossiformes ANCESTRAL SPECIES 67 ENSGT00940000156558 ENSGT00940000154110.b ENSGT00530000063679.A ENSGT00940000159661 ENSGT00940000165845.c.a ENSGT00390000011053 ENSGT00640000091497.a ENSGT01050000244950.a.a.a ENSGT00440000034309 ENSGT00940000164731.f ENSGT00550000074801 ENSGT00940000159116 ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.k #22 ENSGT00940000159370.b #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.a #26 ENSGT00950000183163.b #25 ENSGT00940000156709.a #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #36 ENSGT01030000234935 ENSGT00940000164851.a.g ENSGT00940000159906 ENSGT00940000163670.a.f Asian bonytongue MODERN SPECIES 16 zdhhc23b (ENSSFOG00015016585) ccdc191 (ENSSFOG00015016617) qtrt2 (ENSSFOG00015016750) ENSSFOG00015016785 ENSSFOG00015016803 mix23 (ENSSFOG00015016820) ENSSFOG00015016835 KPNA1 (ENSSFOG00015016843) c8g (ENSSFOG00015016877) ENSSFOG00015028584 eif2s3 (ENSSFOG00015016920) klhl15 (ENSSFOG00015027608) sat1b (ENSSFOG00015016956) acot9.2 (ENSSFOG00015016982) prdx4 (ENSSFOG00015017085) #37 pdha1b (ENSSFOG00015017120) #22 rps6ka3b (ENSSFOG00015017183) #28 ENSSFOG00015030262 #27 ENSSFOG00015031597 #26 ENSSFOG00015017260 ENSSFOG00015017263 #25 CNKSR2 (ENSSFOG00015017278) #29 KLHL34 (ENSSFOG00015029024) #30 smpx (ENSSFOG00015017313) #31 mbtps2 (ENSSFOG00015017325) #32 sms (ENSSFOG00015017358) #33 phex (ENSSFOG00015017417) #34 PTCHD1 (ENSSFOG00015029116) #36 ENSSFOG00015017466 ENSSFOG00015012239 ENSSFOG00015017528 P. kingsleyae MODERN SPECIES 412 acot9.2 (ENSPKIG00000011966) prdx4 (ENSPKIG00000012090) #37 pdha1b (ENSPKIG00000012119) #22 rps6ka3b (ENSPKIG00000012175) #28 eif1axa (ENSPKIG00000012288) #27 ENSPKIG00000012358 #25 CNKSR2 (ENSPKIG00000012427) #29 KLHL34 (ENSPKIG00000012518) #30 smpx (ENSPKIG00000012545) #31 mbtps2 (ENSPKIG00000012564) #32 sms (ENSPKIG00000012603) #33 phex (ENSPKIG00000012686) #34 USF3 (ENSPKIG00000012814) naa50 (ENSPKIG00000012869) ATP6V1A (ENSPKIG00000012921) GRAMD1C (ENSPKIG00000012972) zdhhc23b (ENSPKIG00000013009) ccdc191 (ENSPKIG00000013036) Clupeocephala ANCESTRAL SPECIES 207 ENSGT00390000015971 ENSGT00940000156042 ENSGT00900000141099 ENSGT00940000156508 ENSGT00940000157476 ENSGT00940000155240.B ENSGT00440000034309 ENSGT01050000244868 ENSGT00940000164731 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00950000185751 ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00390000014424 ENSGT00940000155647.bb ENSGT00950000182962.a.a.c ENSGT01090000261942 ENSGT00530000063666.b.db ENSGT00950000183121.b.b.b.b.x ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.l #22 ENSGT00940000159370 #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b Otomorpha ANCESTRAL SPECIES 111 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156508.j ENSGT00940000157476 ENSGT00940000155240.B ENSGT00440000034309 ENSGT01050000244868 ENSGT00940000164731.l ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 Otophysi ANCESTRAL SPECIES 47 ENSGT00940000158260 ENSGT00940000162447 ENSGT01090000260080.b.b ENSGT00940000153776.a.a ENSGT00940000157709.i ENSGT00390000005213 ENSGT00940000154473.b.a.a ENSGT00940000154004.a.e.b ENSGT00940000154473.a ENSGT00940000159294 ENSGT00940000157658 ENSGT00950000183215.c.a.b ENSGT00390000014100.k.b ENSGT00940000162962 ENSGT00940000158777 ENSGT00530000063174.a.k #22 ENSGT00940000159370.d #28 ENSGT00390000008256.rd.a #27 ENSGT00980000201894 ENSGT00390000008256.sd #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000157145 ENSGT00940000159227 ENSGT00390000001844.a.a ENSGT00940000166463 ENSGT00390000007133 ENSGT00390000004601 ENSGT00940000160633.a.a Characiphysae ANCESTRAL SPECIES 17 ENSGT01090000260080.b.b ENSGT00940000153776.a.a ENSGT00940000157709.i ENSGT00390000005213 ENSGT00940000154473.b.a.a ENSGT00940000154473.a ENSGT00940000154004.a.e.b ENSGT00940000159294 ENSGT00940000157658 ENSGT00390000014100.k.a ENSGT00940000153141.B.b ENSGT00950000183215.c.a.b ENSGT00390000014100.k.b ENSGT00940000162962 ENSGT00940000158777 ENSGT00530000063174.a.k #22 ENSGT00940000159370.d #28 ENSGT00390000008256.rd.b #27 ENSGT00980000201894 ENSGT00390000008256.sd #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000157145 ENSGT00940000159227 ENSGT00390000001844.a.a ENSGT00940000166463 ENSGT00390000012054.a ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w Characiphysae_b ANCESTRAL SPECIES 52 ENSGT00950000183215.c.a.b ENSGT00390000014100.k.b ENSGT00940000162962 ENSGT00940000158777 ENSGT00530000063174.a.k #22 ENSGT00940000159370.d #28 ENSGT00390000008256.rd.b #27 ENSGT00980000201894 ENSGT00390000008256.sd #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000157145 ENSGT00940000159227 ENSGT00390000001844.a.a ENSGT00940000166463 ENSGT00390000012054.a ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w Characoidei ANCESTRAL SPECIES 14 ENSGT00550000074850 ENSGT00940000158260 ENSGT00940000162447 ENSGT01090000260080.b.b ENSGT00940000153776.a.a ENSGT00940000157709.i ENSGT00390000005213 ENSGT00940000154473.b.a.a ENSGT00940000154004.a.e.b ENSGT00940000159294 ENSGT00940000157658 ENSGT00950000183215.c.a.b ENSGT00390000014100.k.b ENSGT00940000162962 ENSGT00940000158777 ENSGT00530000063174.a.k #22 ENSGT00940000159370.d #28 ENSGT00980000201894 ENSGT00390000008256.sd #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000157145 ENSGT00940000159227 ENSGT00390000001844.a.a ENSGT00940000166463 ENSGT00390000012054.a ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 Red-bellied piranha MODERN SPECIES 8 cops5 (ENSPNAG00000021972) ppp1r42 (ENSPNAG00000021938) TCF24 (ENSPNAG00000021920) MCMDC2 (ENSPNAG00000021908) sgk3 (ENSPNAG00000003699) MYBL1 (ENSPNAG00000021760) rrs1 (ENSPNAG00000021707) ENSPNAG00000021695 trim55b (ENSPNAG00000021676) DNAJC5B (ENSPNAG00000021634) pde7a (ENSPNAG00000021598) mtfr1 (ENSPNAG00000021553) armc1 (ENSPNAG00000021521) bhlhe22 (ENSPNAG00000006245) ythdf3 (ENSPNAG00000021457) pdha1b (ENSPNAG00000021432) #22 rps6ka3b (ENSPNAG00000021313) #28 ENSPNAG00000021247 eif1axb (ENSPNAG00000021235) #27 ENSPNAG00000021193 #26 ENSPNAG00000021173 zgc:112982 (ENSPNAG00000021161) #25 ENSPNAG00000021132 zgc:112408 (ENSPNAG00000021112) ENSPNAG00000021084 lyz (ENSPNAG00000021068) chodl (ENSPNAG00000021045) ENSPNAG00000020982 apoob (ENSPNAG00000020954) ATP8A2 (ENSPNAG00000020918) SHISA2 (ENSPNAG00000020748) Mexicana tetra MODERN SPECIES 18 ppp1r42 (ENSAMXG00000013664) TCF24 (ENSAMXG00000013680) MCMDC2 (ENSAMXG00000013691) sgk3 (ENSAMXG00000013716) MYBL1 (ENSAMXG00000013759) rrs1 (ENSAMXG00000037893) ENSAMXG00000032945 trim55b (ENSAMXG00000013789) DNAJC5B (ENSAMXG00000037384) pde7a (ENSAMXG00000034112) ENSAMXG00000029419 mtfr1 (ENSAMXG00000032269) armc1 (ENSAMXG00000041843) bhlhe22 (ENSAMXG00000026338) ythdf3 (ENSAMXG00000030366) pdha1b (ENSAMXG00000013896) #22 ENSAMXG00000030935 rps6ka3b (ENSAMXG00000013900) #28 ENSAMXG00000040423 eif1axb (ENSAMXG00000032495) #27 ENSAMXG00000013940 #26 ENSAMXG00000013954 #25 ENSAMXG00000013967 zgc:112408 (ENSAMXG00000013983) ENSAMXG00000039498 ENSAMXG00000042503 lyz (ENSAMXG00000014017) chodl (ENSAMXG00000014033) ENSAMXG00000014069 si:rp71-1f1.4 (ENSAMXG00000032627) apoob (ENSAMXG00000014089) Channel catfish MODERN SPECIES 15 cops5 (ENSIPUG00000014614) ppp1r42 (ENSIPUG00000014588) TCF24 (ENSIPUG00000014579) MCMDC2 (ENSIPUG00000014555) sgk3 (ENSIPUG00000014487) mybl1 (ENSIPUG00000014428) rrs1 (ENSIPUG00000014412) ENSIPUG00000014385 trim55 (ENSIPUG00000014351) DNAJC5B (ENSIPUG00000014336) pde7a (ENSIPUG00000014264) mtfr1 (ENSIPUG00000014219) armc1 (ENSIPUG00000014207) bhlhe22 (ENSIPUG00000014202) YTHDF1 (ENSIPUG00000014157) pdha1b (ENSIPUG00000014101) #22 RPS6KA3 (ENSIPUG00000013955) #28 ENSIPUG00000013916 #27 map7d2 (ENSIPUG00000013874) #26 ENSIPUG00000013837 #25 ENSIPUG00000013799 zgc:112408 (ENSIPUG00000013770) Chodl (ENSIPUG00000013733) c23h11orf65 (ENSIPUG00000013713) si:rp71-1f1.4 (ENSIPUG00000013702) apoob (ENSIPUG00000013681) CNTNAP2 (ENSIPUG00000013587) ENSIPUG00000013570 ENSIPUG00000013559 sec61g (ENSIPUG00000013553) tpk1 (ENSIPUG00000013460) Cyprinoidei ANCESTRAL SPECIES 20 ENSGT00940000154004.a.e.b ENSGT00940000154473.a ENSGT00940000159294 ENSGT00940000157658 ENSGT00950000183215.c.a.b ENSGT00390000014100.k.b ENSGT00940000162962 ENSGT00940000158777 ENSGT00530000063174.a.k #22 ENSGT00940000159370.d #28 ENSGT00390000008256.sd.a.b #27 ENSGT00980000201894 ENSGT00390000008256.sd.a.a #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000153832 ENSGT00940000157145 ENSGT00940000159227 ENSGT00390000001844.a.a ENSGT00940000166463 ENSGT00390000007133 ENSGT00390000004601 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 237 ENSGT00940000158055.f ENSGT00730000111111.n ENSGT00940000153716.A.k.b ENSGT00940000163831.e.b ENSGT01030000234646.B.a.b.c.b ENSGT00940000156040.e.c ENSGT00940000154473.a.b ENSGT00940000154004.a.e.b.f ENSGT00940000154473.a.a.a ENSGT00940000159294.d ENSGT00940000157658.hb ENSGT00950000183215.c.a.b.db ENSGT00390000014100.k.b.c ENSGT00940000162962.b ENSGT00940000158777.r ENSGT00530000063174.a.k.a.a #22 ENSGT00940000159370.d.d #28 ENSGT00940000166443.d.b ENSGT01020000230438.A.l ENSGT00390000010337.A.g ENSGT00950000182952.E.c ENSGT00950000182904.a.a.b.a.a ENSGT00390000008256.sd.b #27 ENSGT00950000183163.b.j #25 ENSGT00940000166938.b ENSGT01030000234614.B.a.b.d ENSGT00940000159227 ENSGT00390000001844.a.a.d ENSGT00940000166463 ENSGT00390000007133.b ENSGT00390000004601.b Goldfish MODERN SPECIES 43 amer2 (ENSCARG00000048501) mtmr6 (ENSCARG00000048697) nup58 (ENSCARG00000052404) zdhhc20b (ENSCARG00000052584) slc51a (ENSCARG00000052714) PDK3 (ENSCARG00000052772) pcyt1ba (ENSCARG00000052996) crhb (ENSCARG00000053003) trim55b (ENSCARG00000053013) DNAJC5B (ENSCARG00000053031) pde7a (ENSCARG00000053100) mtfr1 (ENSCARG00000054597) armc1 (ENSCARG00000054617) bhlhe22 (ENSCARG00000054642) ythdf3 (ENSCARG00000054666) pdha1b (ENSCARG00000054700) #22 rps6ka3b (ENSCARG00000055266) #28 eif1axb (ENSCARG00000056665) #27 ENSCARG00000056780 #26 zgc:112982 (ENSCARG00000056812) #25 ENSCARG00000056865 zgc:112408 (ENSCARG00000056892) ENSCARG00000056923 chodl (ENSCARG00000056978) ENSCARG00000056992 ENSCARG00000056994 ndufb4 (ENSCARG00000057018) hgd (ENSCARG00000057042) arxa (ENSCARG00000058049) MYBL1 (ENSCARG00000018182) sgk3 (ENSCARG00000018309) Cyprininae_a ANCESTRAL SPECIES 236 ENSGT00940000158055.f ENSGT00730000111111.n ENSGT00940000153716.A.k.b ENSGT00940000163831.e.b ENSGT01030000234646.B.a.b.c.b ENSGT00940000156040.e.c ENSGT00940000154473.a.b ENSGT00940000154004.a.e.b.f ENSGT00940000154473.a.a.a ENSGT00940000159294.d ENSGT00940000157658.hb ENSGT00950000183215.c.a.b.db ENSGT00390000014100.k.b.c ENSGT00940000162962.b ENSGT00940000158777.r ENSGT00530000063174.a.k.a.a #22 ENSGT00940000159370.d.d #28 ENSGT00940000166443.d.b ENSGT00390000008256.rd.a #27 ENSGT00950000182941.b.b.b.b.b #26 ENSGT00950000183163.b.j #25 ENSGT00940000166938.b ENSGT01030000234614.B.a.b.d ENSGT00940000159227 ENSGT00390000001844.a.a.d ENSGT00390000007133.b ENSGT00390000004601.b ENSGT00940000160633.a.a.b ENSGT00550000074891.d ENSGT00390000005213.a ENSGT00940000157709.i.a.a Golden-line barbel MODERN SPECIES 84 amer2 (ENSSGRG00000053103) mtmr6 (ENSSGRG00000053098) nup58 (ENSSGRG00000053078) zdhhc20b (ENSSGRG00000053077) slc51a (ENSSGRG00000053073) ENSSGRG00000053069 pcyt1ba (ENSSGRG00000053061) crhb (ENSSGRG00000053058) trim55b (ENSSGRG00000053057) DNAJC5B (ENSSGRG00000053056) pde7a (ENSSGRG00000053044) mtfr1 (ENSSGRG00000053043) armc1 (ENSSGRG00000053042) bhlhe22 (ENSSGRG00000053041) ythdf3 (ENSSGRG00000053039) pdha1b (ENSSGRG00000053038) #22 rps6ka3b (ENSSGRG00000052513) #28 ENSSGRG00000052497 eif1axb (ENSSGRG00000052419) #27 ENSSGRG00000052417 #26 zgc:112982 (ENSSGRG00000052415) #25 ENSSGRG00000052414 zgc:112408 (ENSSGRG00000052413) lyz (ENSSGRG00000052409) chodl (ENSSGRG00000052405) ENSSGRG00000052403 hgd (ENSSGRG00000052378) arxa (ENSSGRG00000052377) pola1 (ENSSGRG00000052342) rrs1 (ENSSGRG00000052338) ENSSGRG00000052337 Cyprininae ANCESTRAL SPECIES ENSGT00530000063174.a.k.a.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00530000063174.a.k.a.b #22 Golden-line barbel MODERN SPECIES 125 ENSSGRG00000035270 ENSSGRG00000035264 amer2 (ENSSGRG00000035262) mtmr6 (ENSSGRG00000034980) nup58 (ENSSGRG00000034792) zdhhc20b (ENSSGRG00000034392) ENSSGRG00000034153 pcyt1ba (ENSSGRG00000034150) crhb (ENSSGRG00000034149) trim55b (ENSSGRG00000034147) pde7a (ENSSGRG00000033676) mtfr1 (ENSSGRG00000033664) armc1 (ENSSGRG00000033663) bhlhe22 (ENSSGRG00000033661) ythdf3 (ENSSGRG00000033651) pdha1b (ENSSGRG00000033648) #22 rps6ka3b (ENSSGRG00000031400) #28 ENSSGRG00000031338 #27 ENSSGRG00000031336 #26 zgc:112982 (ENSSGRG00000031335) #25 ENSSGRG00000031334 ENSSGRG00000031333 zgc:112408 (ENSSGRG00000031332) lyz (ENSSGRG00000031330) chodl (ENSSGRG00000031329) ENSSGRG00000031327 ndufb4 (ENSSGRG00000031326) hgd (ENSSGRG00000030715) arxa (ENSSGRG00000030696) pola1 (ENSSGRG00000029920) rrs1 (ENSSGRG00000029903) Cyprininae ANCESTRAL SPECIES 45 ENSGT00530000063529.A.i.a ENSGT00940000158055.e ENSGT00730000111111.o ENSGT00940000153716.A.k.a ENSGT00940000163831.e.a ENSGT01030000234646.B.a.b.c.a ENSGT00940000156040.e.d ENSGT00940000154004.a.e.b.e ENSGT00940000154473.a.a.b ENSGT00940000159294.c ENSGT00940000157658.ib ENSGT00950000183215.c.a.b.eb ENSGT00390000014100.k.b.d ENSGT00940000162962.a ENSGT00940000158777.q ENSGT00530000063174.a.k.b #22 ENSGT00940000159370.d.c #28 ENSGT00390000008256.sd.a.b #27 ENSGT00950000182941.b.b.b.b.a.a #26 ENSGT00950000183163.b.i #25 ENSGT00940000166938.a ENSGT01030000234614.B.a.b.c ENSGT00940000153832 ENSGT00390000001844.a.a.c ENSGT00390000007133.a ENSGT00390000004601.a ENSGT00940000160633.a.a.a ENSGT00550000074891.c ENSGT00390000005213.b ENSGT00940000157709.i.a.b ENSGT00940000153776.a.a.h Cyprininae_a ANCESTRAL SPECIES 71 ENSGT00530000063529.A.i.a ENSGT00940000158055.e ENSGT00730000111111.o ENSGT00940000153716.A.k.a ENSGT00940000163831.e.a ENSGT01030000234646.B.a.b.c.a ENSGT00940000156040.e.d ENSGT00940000154004.a.e.b.e ENSGT00940000154473.a.a.b ENSGT00940000159294.c ENSGT00940000157658.ib ENSGT00950000183215.c.a.b.eb ENSGT00390000014100.k.b.d ENSGT00940000162962.a ENSGT00940000158777.q ENSGT00530000063174.a.k.b #22 ENSGT00940000159370.d.c #28 ENSGT00390000008256.sd.a.a #27 ENSGT00950000182941.b.b.b.b.a.a #26 ENSGT00950000183163.b.i #25 ENSGT00940000166938.a ENSGT01030000234614.B.a.b.c ENSGT00940000153832 ENSGT00390000001844.a.a.c ENSGT00940000166463 ENSGT00390000007133.a ENSGT00390000004601.a ENSGT00940000160633.a.a.a ENSGT00550000074891.c ENSGT00390000005213.b ENSGT00940000157709.i.a.b Common carp reference MODERN SPECIES 14 cip2a (ENSCCRG00000023431) si:ch73-264p11.1 (ENSCCRG00000055019) ENSCCRG00000064131 ENSCCRG00000046672 mtmr6 (ENSCCRG00000048847) nup58 (ENSCCRG00000056775) slc51a (ENSCCRG00000034761) ENSCCRG00000060877 trim55b (ENSCCRG00000038445) crhb (ENSCCRG00000066422) DNAJC5B (ENSCCRG00000016411) pde7a (ENSCCRG00000056545) mtfr1 (ENSCCRG00000075207) armc1 (ENSCCRG00000066459) ythdf3 (ENSCCRG00000061877) pdha1b (ENSCCRG00000061388) #22 rps6ka3b (ENSCCRG00000021404) #28 eif1axb (ENSCCRG00000008453) #27 MAP7D2 (ENSCCRG00000073438) #26 zgc:112982 (ENSCCRG00000008429) #25 ENSCCRG00000008420 zgc:112408 (ENSCCRG00000059313) ENSCCRG00000062456 chodl (ENSCCRG00000048479) ndufb4 (ENSCCRG00000081842) hgd (ENSCCRG00000048424) arxa (ENSCCRG00000014710) pola1 (ENSCCRG00000025848) MYBL1 (ENSCCRG00000048895) sgk3 (ENSCCRG00000048901) MCMDC2 (ENSCCRG00000014581) Zebrafish MODERN SPECIES 16 amer2 (ENSDARG00000075222) mtmr6 (ENSDARG00000016794) nup58 (ENSDARG00000033965) zdhhc20b (ENSDARG00000058178) slc51a (ENSDARG00000045306) PDK3 (ENSDARG00000014527) pcyt1ba (ENSDARG00000058162) crhb (ENSDARG00000027657) trim55b (ENSDARG00000058158) DNAJC5B (ENSDARG00000058147) pde7a (ENSDARG00000045305) mtfr1 (ENSDARG00000045304) armc1 (ENSDARG00000013861) bhlhe22 (ENSDARG00000058039) ythdf3 (ENSDARG00000057939) pdha1b (ENSDARG00000010555) #22 rps6ka3b (ENSDARG00000057927) #28 ENSDARG00000087483 eif1axb (ENSDARG00000057912) #27 MAP7D2 (ENSDARG00000045316) #26 zgc:112982 (ENSDARG00000001829) #25 ENSDARG00000005332 zgc:112408 (ENSDARG00000016207) ENSDARG00000062519 lyz (ENSDARG00000057789) chodl (ENSDARG00000034528) ENSDARG00000090346 ndufb4 (ENSDARG00000019332) hgd (ENSDARG00000058005) arxa (ENSDARG00000058011) pola1 (ENSDARG00000045308) Clupeiformes ANCESTRAL SPECIES 47 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156508.j ENSGT00940000157476 ENSGT00940000155240.B ENSGT00440000034309 ENSGT01050000244868.e ENSGT00940000164731.l ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 Denticle herring MODERN SPECIES 11 commd3 (ENSDCDG00000035751) MLLT10 (ENSDCDG00000035748) ENSDCDG00000035742 ENSDCDG00000035741 pip4k2aa (ENSDCDG00000035733) ARMC3 (ENSDCDG00000035730) msrb2 (ENSDCDG00000035726) c8g (ENSDCDG00000035723) ptgdsb.1 (ENSDCDG00000035718) ENSDCDG00000035711 eif2s3 (ENSDCDG00000035700) klhl15 (ENSDCDG00000035686) apoob (ENSDCDG00000035682) sat1b (ENSDCDG00000035679) acot9.2 (ENSDCDG00000035675) ENSDCDG00000035674 #22 rps6ka3b (ENSDCDG00000035665) #28 ENSDCDG00000035648 ENSDCDG00000035644 tmtopsb (ENSDCDG00000035640) ENSDCDG00000035639 and1 (ENSDCDG00000035637) cops9 (ENSDCDG00000035636) otos (ENSDCDG00000035635) apodb (ENSDCDG00000035632) CLDN11 (ENSDCDG00000035630) ENSDCDG00000035628 ENSDCDG00000035624 skilb (ENSDCDG00000035623) zgc:194621 (ENSDCDG00000035622) ENSDCDG00000035618 Euteleosteomorpha ANCESTRAL SPECIES 135 ENSGT00940000160853 ENSGT01100000263502.A.a.a.b.a.a ENSGT00500000045505.b ENSGT00390000000076 ENSGT00390000011600 ENSGT00510000046981.b.a.d ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00950000185751 ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000155920 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00390000016814.a ENSGT01070000253816.b.c ENSGT00940000156699.i ENSGT00940000155015.g.a ENSGT00950000183196.B.f Acanthomorphata ANCESTRAL SPECIES 144 ENSGT00940000172693 ENSGT00940000167146 ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00950000185751 ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000171984 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT01070000255370 ENSGT00940000163670.b.a ENSGT00940000163670.a ENSGT00940000159906.f ENSGT00940000157755.r Euacanthomorphacea ANCESTRAL SPECIES 16 ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000167146 ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000171984 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a ENSGT00940000163670.a ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b Percomorphaceae ANCESTRAL SPECIES 67 ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000167146 ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000171984 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a ENSGT00940000163670.a ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b Tiger tail seahorse MODERN SPECIES 39 psme2 (ENSHCOG00000008277) RNF31 (ENSHCOG00000008270) ENSHCOG00000008265 emc9 (ENSHCOG00000008256) ENSHCOG00000008243 ENSHCOG00000008236 ENSHCOG00000008232 ENSHCOG00000008215 ENSHCOG00000008195 ENSHCOG00000008183 vipr2 (ENSHCOG00000008103) ENSHCOG00000008090 msl2b (ENSHCOG00000008058) tnfsf10 (ENSHCOG00000008056) nceh1b.1 (ENSHCOG00000008011) pdha1b (ENSHCOG00000007812) #22 rps6ka3b (ENSHCOG00000007777) #28 eif1axa (ENSHCOG00000007746) #27 ENSHCOG00000007743 ENSHCOG00000007734 ENSHCOG00000007711 lztfl1 (ENSHCOG00000007637) DNAJC13 (ENSHCOG00000007182) topbp1 (ENSHCOG00000002411) ENSHCOG00000002387 gli3 (ENSHCOG00000002344) prpf4bb (ENSHCOG00000002237) PXDC1 (ENSHCOG00000002223) TMX3 (ENSHCOG00000002207) DSEL (ENSHCOG00000002183) ENSHCOG00000002172 Percomorphaceae_B ANCESTRAL SPECIES 20 ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000167146 ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000162944 ENSGT01030000234893 ENSGT00940000163670.b.a ENSGT00940000163670.a ENSGT00940000159906.f ENSGT00940000157755.r Ovalentaria ANCESTRAL SPECIES 21 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00940000163015 ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000162944 ENSGT01020000230622 ENSGT00940000163670.b.a ENSGT00940000163670.a ENSGT00940000159906.f ENSGT00940000157755.r Atherinomorphae ANCESTRAL SPECIES 19 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00940000163015 ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT01030000235646 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000171984 ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a ENSGT00940000163670.a ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b ENSGT00940000158089.b Cyprinodontiformes ANCESTRAL SPECIES 36 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00940000163015 ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b.b.b #26 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000171984 ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a.q.a.a ENSGT01030000234893.b Cyprinodontoidei ANCESTRAL SPECIES 48 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00940000163015 ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b.b.b #26 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000171984 ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a.q.a.a ENSGT01030000234893.b.a.a Poeciliinae ANCESTRAL SPECIES 33 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00940000163015 ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000171984.f ENSGT00940000153251.a ENSGT00940000155244.c.c.b.a ENSGT00940000155244.c.c.b.b ENSGT00940000159794 ENSGT00940000154641.C.b.h.g.a ENSGT01050000244843.c.a.a.a.b.b.a.a.b.a ENSGT00940000158239.a.b ENSGT01030000234893.b.b Poecilia ANCESTRAL SPECIES 70 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.a.b ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00940000163015 ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000171984.f ENSGT00940000153251.a ENSGT00940000155244.c.c.b.a ENSGT00940000155244.c.c.b.b ENSGT00940000159794 ENSGT00940000158239.a.b ENSGT01030000234893.b.b ENSGT00940000154641.C.b.h.g.a ENSGT01050000244843.c.a.a.a.b.b.a.a.b.a NAME_6 ANCESTRAL SPECIES 193 ENSGT00940000155893.a ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.a.b ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00940000163015 ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 Sailfin molly MODERN SPECIES 1791 ENSPLAG00000018716 pdha1b (ENSPLAG00000018747) #22 ENSPLAG00000018756 ENSPLAG00000018767 ENSPLAG00000000425 ENSPLAG00000018784 Amazon molly MODERN SPECIES 850 ENSPFOG00000008689 rpl22l1 (ENSPFOG00000023086) ENSPFOG00000008700 ENSPFOG00000008774 ENSPFOG00000008963 ENSPFOG00000009163 ENSPFOG00000009245 ENSPFOG00000009396 eif2s3 (ENSPFOG00000009544) klhl15 (ENSPFOG00000009668) apoob (ENSPFOG00000009802) sat1b (ENSPFOG00000009808) acot9.2 (ENSPFOG00000009814) ENSPFOG00000010048 #22 Guppy MODERN SPECIES 451 ENSPREG00000010910 ENSPREG00000010921 rpl22l1 (ENSPREG00000010924) ENSPREG00000010946 ENSPREG00000010957 ENSPREG00000010976 ENSPREG00000011035 ENSPREG00000011082 ENSPREG00000011102 ENSPREG00000011127 eif2s3 (ENSPREG00000011148) klhl15 (ENSPREG00000011196) apoob (ENSPREG00000011228) sat1b (ENSPREG00000011242) acot9.2 (ENSPREG00000011268) pdha1b (ENSPREG00000011312) #22 ENSPREG00000011343 rps6ka3b (ENSPREG00000011354) #28 eif1axa (ENSPREG00000011381) #27 ENSPREG00000011406 #25 ENSPREG00000011428 ENSPREG00000011459 ENSPREG00000011470 cip2a (ENSPREG00000011485) ENSPREG00000011514 chrnd (ENSPREG00000011542) ENSPREG00000011584 ENSPREG00000011594 ENSPREG00000011607 ENSPREG00000011625 FZD7 (ENSPREG00000011636) Platyfish MODERN SPECIES 13 cldn11b (ENSXMAG00000021629) ENSXMAG00000012058 ENSXMAG00000026098 rpl22l1 (ENSXMAG00000012049) ENSXMAG00000023682 tnika (ENSXMAG00000021927) PLD1 (ENSXMAG00000011913) ENSXMAG00000027353 ENSXMAG00000025874 ENSXMAG00000011895 eif2s3 (ENSXMAG00000011878) klhl15 (ENSXMAG00000023286) apoob (ENSXMAG00000011828) sat1b (ENSXMAG00000011825) acot9.2 (ENSXMAG00000011796) pdha1b (ENSXMAG00000011748) #22 ENSXMAG00000024066 ENSXMAG00000022340 ENSXMAG00000023723 ENSXMAG00000023950 rps6ka3b (ENSXMAG00000023369) #28 eif1axb (ENSXMAG00000021594) #27 ENSXMAG00000010229 #25 ENSXMAG00000010235 ENSXMAG00000010252 si:ch73-264p11.1 (ENSXMAG00000010256) cip2a (ENSXMAG00000022014) ENSXMAG00000026348 chrnd (ENSXMAG00000022574) ENSXMAG00000025603 ENSXMAG00000022125 NAME_4 ANCESTRAL SPECIES 181 ENSGT00940000154964.z ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801.d ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b.b.b #26 Mummichog MODERN SPECIES 424 ENSFHEG00000006896 cldn11b (ENSFHEG00000006881) ENSFHEG00000006878 rpl22l1 (ENSFHEG00000006859) ENSFHEG00000006842 TNIK (ENSFHEG00000006806) PLD1 (ENSFHEG00000006649) ENSFHEG00000006624 ENSFHEG00000006585 ENSFHEG00000000176 eif2s3 (ENSFHEG00000006575) klhl15 (ENSFHEG00000006527) apoob (ENSFHEG00000006467) sat1b (ENSFHEG00000006333) acot9.2 (ENSFHEG00000006439) pdha1b (ENSFHEG00000006301) #22 rps6ka3b (ENSFHEG00000006236) #28 ENSFHEG00000006180 eif1axb (ENSFHEG00000006145) #27 ENSFHEG00000006117 #25 Sheepshead minnow MODERN SPECIES 153 LRRTM4 (ENSCVAG00000015393) ENSCVAG00000015401 anapc5 (ENSCVAG00000015468) rpl22l1 (ENSCVAG00000015479) ENSCVAG00000015500 TNIK (ENSCVAG00000015809) PLD1 (ENSCVAG00000015855) ENSCVAG00000015869 ENSCVAG00000015934 ENSCVAG00000015983 eif2s3 (ENSCVAG00000016029) klhl15 (ENSCVAG00000016060) apoob (ENSCVAG00000016067) sat1b (ENSCVAG00000016096) acot9.2 (ENSCVAG00000016180) pdha1b (ENSCVAG00000016266) #22 rps6ka3b (ENSCVAG00000016379) #28 eif1axa (ENSCVAG00000016422) #27 ENSCVAG00000016438 #25 ENSCVAG00000016468 #26 Aplocheiloidei ANCESTRAL SPECIES 232 ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b.b.b #26 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 Mangrove rivulus MODERN SPECIES 1132 pdha1b (ENSKMAG00000002562) #22 Turquoise killifish MODERN SPECIES 1617 ENSNFUG00015023353 ENSNFUG00015023094 PLD1 (ENSNFUG00015022401) ENSNFUG00015022386 ENSNFUG00015022383 ENSNFUG00015022379 EIF2S3 (ENSNFUG00015022366) KLHL15 (ENSNFUG00015022361) APOO (ENSNFUG00015022353) SATL1 (ENSNFUG00015022339) ENSNFUG00015022335 ENSNFUG00015022327 ENSNFUG00015022320 #26 ENSNFUG00015022301 #25 ACOT9 (ENSNFUG00015022286) pdha1b (ENSNFUG00015022255) #22 EIF1AXB (ENSNFUG00015022210) #27 rps6ka3b (ENSNFUG00015021708) #28 ENSNFUG00015021682 ENSNFUG00015021671 ENSNFUG00015021667 ENSNFUG00015021665 ENSNFUG00015020152 vipr2 (ENSNFUG00015020031) ENSNFUG00015020026 ENSNFUG00015020021 Nfu_g_1_011390 (ENSNFUG00015020016) MSL2 (ENSNFUG00015020008) ENSNFUG00015020003 TNFSF10 (ENSNFUG00015019995) ENSNFUG00015019990 Oryzias ANCESTRAL SPECIES 18 ENSGT00940000162952.d.b.a ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT01030000235646 ENSGT00940000159794 ENSGT01030000235460 ENSGT00940000163670.a ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b ENSGT00940000158089.b Oryzias_b ANCESTRAL SPECIES 16 ENSGT00940000162952.d.b.a ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000167146 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00940000167175.b.a ENSGT00940000165646.B ENSGT00940000159794 Indian medaka MODERN SPECIES 23 ENSOMEG00000019943 ENSOMEG00000019918 ENSOMEG00000019804 ENSOMEG00000019792 ENSOMEG00000019773 ENSOMEG00000019764 hmgb2b (ENSOMEG00000019748) arcn1b (ENSOMEG00000000523) ENSOMEG00000019644 ENSOMEG00000019633 eif2s3 (ENSOMEG00000019582) klhl15 (ENSOMEG00000019521) apoob (ENSOMEG00000019455) sat1b (ENSOMEG00000019425) acot9.2 (ENSOMEG00000019355) pdha1b (ENSOMEG00000019268) #22 rps6ka3b (ENSOMEG00000019141) #28 ENSOMEG00000018980 #27 ENSOMEG00000018949 chrnd (ENSOMEG00000018863) RSBN1 (ENSOMEG00000018827) MAGI3 (ENSOMEG00000018795) tmem269 (ENSOMEG00000018680) HSPG2 (ENSOMEG00000018627) agmat (ENSOMEG00000018397) ENSOMEG00000018370 pink1 (ENSOMEG00000018348) ENSOMEG00000018314 ENSOMEG00000018309 ENSOMEG00000018291 fam43b (ENSOMEG00000018278) Javanese ricefish MODERN SPECIES 12 ENSOJAG00000015366 ENSOJAG00000015373 cldn11b (ENSOJAG00000015394) ENSOJAG00000015402 rpl22l1 (ENSOJAG00000015425) ENSOJAG00000015496 PLD1 (ENSOJAG00000017535) ENSOJAG00000018452 ENSOJAG00000018484 eif2s3 (ENSOJAG00000018554) klhl15 (ENSOJAG00000018890) ENSOJAG00000018928 sat1b (ENSOJAG00000018975) ENSOJAG00000018990 acot9.2 (ENSOJAG00000019022) pdha1b (ENSOJAG00000019101) #22 rps6ka3b (ENSOJAG00000019490) #28 eif1axb (ENSOJAG00000019878) #27 ENSOJAG00000019907 ENSOJAG00000019913 ENSOJAG00000019924 ENSOJAG00000019945 ENSOJAG00000019955 ENSOJAG00000019967 ENSOJAG00000020039 ENSOJAG00000020242 vipr2 (ENSOJAG00000022609) ENSOJAG00000022643 chrnd (ENSOJAG00000022674) ENSOJAG00000022913 ENSOJAG00000022918 Oryzias_a ANCESTRAL SPECIES 82 ENSGT00940000154964.z ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00940000159794 ENSGT01030000235460 ENSGT00940000163670.a ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b ENSGT00940000158089.b Chinese medaka MODERN SPECIES 812 eif1axb (ENSOSIG00000010416) #27 rps6ka3b (ENSOSIG00000010565) #28 acot9.2 (ENSOSIG00000020624) pdha1b (ENSOSIG00000020628) #22 Japanese Medaka HdrR MODERN SPECIES 12 rpl22l1 (ENSORLG00000002916) ENSORLG00000027121 TNIK (ENSORLG00000002885) PLD1 (ENSORLG00000002792) ENSORLG00000024083 ENSORLG00000002741 ENSORLG00000002722 eif2s3 (ENSORLG00000002716) klhl15 (ENSORLG00000018526) APOO (ENSORLG00000002692) ENSORLG00000027784 ENSORLG00000002683 ENSORLG00000027078 sat1b (ENSORLG00000002664) acot9.2 (ENSORLG00000002637) pdha1b (ENSORLG00000002588) #22 rps6ka3b (ENSORLG00000002556) #28 eif1axb (ENSORLG00000002444) #27 chrnd (ENSORLG00000026994) ENSORLG00000024488 ENSORLG00000023761 ENSORLG00000019029 ENSORLG00000002403 ENSORLG00000027020 ENSORLG00000002349 ENSORLG00000022594 ENSORLG00000022921 ENSORLG00000024603 ENSORLG00000030174 ENSORLG00000026556 ENSORLG00000026602 Ovalentaria_B ANCESTRAL SPECIES 20 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00940000163015 ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a ENSGT01020000230622 ENSGT00940000162944 ENSGT00940000163670.a ENSGT00940000159906.f ENSGT00940000157755.r Cichlidae ANCESTRAL SPECIES 79 ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000162716 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.b ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a.n.a.b.b ENSGT01050000244843.c.a.a.a.a.a ENSGT00940000163670.b.a.m Pseudocrenilabrinae ANCESTRAL SPECIES 52 ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293.c ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.b ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a.n.a.b.b.a ENSGT00950000183169.A.b.e.a.a.a.b.b ENSGT01030000234576.D.a.b.a.b.a.a.a.a.a.e.b.b.b.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 67 ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00730000111293.d ENSGT00940000162716 ENSGT00940000156456 ENSGT00730000111293.c ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.b ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a.n.a.b.b.a ENSGT00950000183169.A.b.e.a.a.a.b.b ENSGT01030000234576.D.a.b.a.b.a.a.a.a.a.e.b.b.b.a Haplochromini ANCESTRAL SPECIES 77 ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000162716 ENSGT00940000156456 ENSGT00730000111293.c ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.b ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a.n.a.b.b.a ENSGT00950000183169.A.b.e.a.a.a.b.b ENSGT01030000234576.D.a.b.a.b.a.a.a.a.a.e.b.b.b.a Burton s mouthbrooder MODERN SPECIES 727 ENSHBUG00000011641 ENSHBUG00000011662 ENSHBUG00000011699 ENSHBUG00000011711 ENSHBUG00000011717 klhl15 (ENSHBUG00000000322) eif2s3 (ENSHBUG00000011793) ENSHBUG00000011808 sat1b (ENSHBUG00000011831) acot9.2 (ENSHBUG00000011854) ENSHBUG00000011863 #22 rps6ka3b (ENSHBUG00000011916) #28 eif1axb (ENSHBUG00000011962) #27 ENSHBUG00000011971 ENSHBUG00000011983 ENSHBUG00000011986 cip2a (ENSHBUG00000012253) chrnd (ENSHBUG00000012293) Haplochromini_A ANCESTRAL SPECIES 81 ENSGT00940000163670.b.a.n.a.a.b ENSGT01070000253760.b.a.a.a.a.b.a.a ENSGT01050000244843.c.a.a.a.a.a ENSGT00940000155015.g.a ENSGT00940000162716 ENSGT00940000156456 ENSGT00730000111293.c ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.b ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a.n.a.b.b.a ENSGT00950000183169.A.b.e.a.a.a.b.b ENSGT01030000234576.D.a.b.a.b.a.a.a.a.a.e.b.b.b.a P. nyererei MODERN SPECIES 655 ENSPNYG00000001223 ENSPNYG00000001175 ENSPNYG00000001135 eif2s3 (ENSPNYG00000001094) klhl15 (ENSPNYG00000001030) apoob (ENSPNYG00000000880) sat1b (ENSPNYG00000000840) acot9.2 (ENSPNYG00000000825) ENSPNYG00000024273 #22 rps6ka3b (ENSPNYG00000024272) #28 ENSPNYG00000024271 eif1axb (ENSPNYG00000024270) #27 zgc:112982 (ENSPNYG00000024269) #25 ENSPNYG00000024268 ENSPNYG00000024267 ENSPNYG00000024266 chrnd (ENSPNYG00000024265) ENSPNYG00000024264 Haplochromini_B ANCESTRAL SPECIES 90 ENSGT00940000163670.b.a.n.a.a.a.a.a ENSGT00940000163670.b.a.n.a.a.a.a.b.a ENSGT01050000244843.c.a.a.a.a.b.b ENSGT00940000163670.b.a.n.a.a.b ENSGT01070000253760.b.a.a.a.a.b.a.a ENSGT01050000244843.c.a.a.a.a.a ENSGT00940000155015.g.a ENSGT00940000162716 ENSGT00940000156456 ENSGT00730000111293.c ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.b ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a.n.a.b.b.a ENSGT00950000183169.A.b.e.a.a.a.b.b ENSGT01030000234576.D.a.b.a.b.a.a.a.a.a.e.b.b.b.a Zebra mbuna MODERN SPECIES 1112 ENSMZEG00005022880 ENSMZEG00005022878 scn5lab (ENSMZEG00005020832) ENSMZEG00005020759 ENSMZEG00005020757 ENSMZEG00005020748 ENSMZEG00005020745 ENSMZEG00005020736 ENSMZEG00005020731 ENSMZEG00005020725 eif2s3 (ENSMZEG00005020717) klhl15 (ENSMZEG00005020694) apoob (ENSMZEG00005020685) sat1b (ENSMZEG00005020683) acot9.2 (ENSMZEG00005020672) pdha1b (ENSMZEG00005020652) #22 rps6ka3b (ENSMZEG00005020643) #28 ENSMZEG00005020627 eif1axb (ENSMZEG00005020621) #27 MAP7D2 (ENSMZEG00005020617) #26 ENSMZEG00005020613 #25 ENSMZEG00005020610 si:ch73-264p11.1 (ENSMZEG00005020606) cip2a (ENSMZEG00005020597) chrnd (ENSMZEG00005020586) ENSMZEG00005020578 ENSMZEG00005020574 ENSMZEG00005020571 ENSMZEG00005020568 ENSMZEG00005020562 ENSMZEG00005020561 Eastern happy MODERN SPECIES 21 ENSACLG00000014542 ENSACLG00000014552 ENSACLG00000014570 ENSACLG00000014600 ENSACLG00000014636 ENSACLG00000014706 ENSACLG00000014729 ENSACLG00000014780 ENSACLG00000014787 ENSACLG00000014820 eif2s3 (ENSACLG00000014869) klhl15 (ENSACLG00000014951) apoob (ENSACLG00000015002) sat1b (ENSACLG00000015045) acot9.2 (ENSACLG00000015069) pdha1b (ENSACLG00000015121) #22 rps6ka3b (ENSACLG00000015200) #28 ENSACLG00000015383 eif1axb (ENSACLG00000015402) #27 rps6ka3b (ENSACLG00000015458) #28 ENSACLG00000015521 #25 ENSACLG00000015542 si:ch73-264p11.1 (ENSACLG00000015564) cip2a (ENSACLG00000015575) chrnd (ENSACLG00000015676) ENSACLG00000015735 ENSACLG00000015763 ENSACLG00000015781 ENSACLG00000015798 ENSACLG00000015810 ENSACLG00000015816 Lyretail cichlid MODERN SPECIES 497 ENSNBRG00000009279 ENSNBRG00000009269 ENSNBRG00000009249 ENSNBRG00000009144 ENSNBRG00000009014 ENSNBRG00000008983 eif2s3 (ENSNBRG00000008945) klhl15 (ENSNBRG00000008874) apoob (ENSNBRG00000008780) sat1b (ENSNBRG00000008755) ENSNBRG00000008732 ACOT9 (ENSNBRG00000008713) pdha1b (ENSNBRG00000008654) #22 ENSNBRG00000008630 rps6ka3b (ENSNBRG00000008589) #28 ENSNBRG00000008410 eif1axb (ENSNBRG00000008321) #27 ENSNBRG00000008311 ENSNBRG00000008271 si:ch73-264p11.1 (ENSNBRG00000008252) cip2a (ENSNBRG00000008195) ENSNBRG00000008164 Nile tilapia MODERN SPECIES 21 ENSONIG00000038190 ENSONIG00000032379 ENSONIG00000041971 ENSONIG00000030531 ENSONIG00000042484 ENSONIG00000031655 ENSONIG00000008255 ENSONIG00000008253 ENSONIG00000008245 ENSONIG00000008244 eif2s3 (ENSONIG00000008238) klhl15 (ENSONIG00000008235) apoob (ENSONIG00000008234) sat1b (ENSONIG00000008231) acot9.2 (ENSONIG00000008224) pdha1b (ENSONIG00000008220) #22 rps6ka3b (ENSONIG00000008212) #28 ENSONIG00000008211 eif1axb (ENSONIG00000008209) #27 ENSONIG00000039125 #25 ENSONIG00000008205 ENSONIG00000035557 zgc:112408 (ENSONIG00000008203) ENSONIG00000041543 ENSONIG00000041226 cip2a (ENSONIG00000008200) chrnd (ENSONIG00000008195) ENSONIG00000008274 ENSONIG00000031140 ENSONIG00000042402 ENSONIG00000028402 Midas cichlid MODERN SPECIES 243 ENSACIG00000009945 ENSACIG00000009925 ENSACIG00000009868 ENSACIG00000009862 ENSACIG00000009810 ENSACIG00000009682 ENSACIG00000009663 ENSACIG00000009634 eif2s3 (ENSACIG00000009600) klhl15 (ENSACIG00000009569) apoob (ENSACIG00000009540) sat1b (ENSACIG00000009518) acot9.2 (ENSACIG00000009312) pdha1b (ENSACIG00000009242) #22 rps6ka3b (ENSACIG00000009187) #28 ENSACIG00000009172 eif1axa (ENSACIG00000009147) #27 zgc:112982 (ENSACIG00000009107) #25 ENSACIG00000009042 zgc:112408 (ENSACIG00000008945) si:ch73-264p11.1 (ENSACIG00000008933) cip2a (ENSACIG00000008726) ENSACIG00000008703 ENSACIG00000008692 ENSACIG00000008679 Pomacentridae ANCESTRAL SPECIES 80 ENSGT00940000154964.z ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330.k ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 Pomacentridae_A ANCESTRAL SPECIES 114 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330.l ENSGT00390000005330.k ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a.k.a.a ENSGT01050000244843.c.a.a.a.a.a Amphiprion ANCESTRAL SPECIES 145 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000167146 ENSGT00940000162716 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330.k ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 Clown anemonefish MODERN SPECIES 583 acot9.2 (ENSAOCG00000012352) ENSAOCG00000012275 #22 mms22l (ENSAOCG00000012132) klhl32 (ENSAOCG00000012098) fzd6 (ENSAOCG00000012030) CTHRC1 (ENSAOCG00000012016) slc25a32b (ENSAOCG00000012002) dcaf13 (ENSAOCG00000011982) RIMS2 (ENSAOCG00000002333) ENSAOCG00000011877 TMEM74 (ENSAOCG00000011861) emc2 (ENSAOCG00000011848) eif3ea (ENSAOCG00000011820) RSPO2 (ENSAOCG00000011743) ENSAOCG00000011719 ENSAOCG00000011558 ENSAOCG00000011232 Orange clownfish MODERN SPECIES 14 cldn11b (ENSAPEG00000004102) ENSAPEG00000004137 rpl22l1 (ENSAPEG00000004158) ENSAPEG00000004194 TNIK (ENSAPEG00000004265) PLD1 (ENSAPEG00000004358) ENSAPEG00000004692 ENSAPEG00000004761 ENSAPEG00000004810 eif2s3 (ENSAPEG00000004840) klhl15 (ENSAPEG00000004899) apoob (ENSAPEG00000004940) sat1b (ENSAPEG00000004956) ercc4 (ENSAPEG00000004992) acot9.2 (ENSAPEG00000005026) pdha1b (ENSAPEG00000005170) #22 rps6ka3b (ENSAPEG00000005334) #28 eif1axb (ENSAPEG00000005361) #27 ENSAPEG00000005388 #25 ENSAPEG00000005437 zgc:112408 (ENSAPEG00000005537) ENSAPEG00000005552 cip2a (ENSAPEG00000005607) chrnd (ENSAPEG00000005864) ENSAPEG00000005905 ENSAPEG00000005941 ENSAPEG00000005948 ENSAPEG00000005972 ENSAPEG00000006017 mbtps2 (ENSAPEG00000006028) #32 phex (ENSAPEG00000006079) #34 Spiny chromis MODERN SPECIES 2452 sat1b (ENSAPOG00000022051) ENSAPOG00000022024 acot9.2 (ENSAPOG00000022003) pdha1b (ENSAPOG00000021974) #22 Bicolor damselfish MODERN SPECIES 379 cldn11b (ENSSPAG00000016900) ENSSPAG00000016908 rpl22l1 (ENSSPAG00000016926) ENSSPAG00000016936 TNIK (ENSSPAG00000016970) PLD1 (ENSSPAG00000017147) ENSSPAG00000017182 ENSSPAG00000017210 ENSSPAG00000017232 ENSSPAG00000017266 eif2s3 (ENSSPAG00000017292) klhl15 (ENSSPAG00000017346) apoob (ENSSPAG00000017433) sat1b (ENSSPAG00000017441) acot9.2 (ENSSPAG00000017464) pdha1b (ENSSPAG00000017523) #22 rps6ka3b (ENSSPAG00000017578) #28 eif1axb (ENSSPAG00000017728) #27 ENSSPAG00000017763 #25 ENSSPAG00000017805 zgc:112408 (ENSSPAG00000017869) ENSSPAG00000017877 cip2a (ENSSPAG00000017905) chrnd (ENSSPAG00000018044) ENSSPAG00000018072 ENSSPAG00000018087 ENSSPAG00000018108 ENSSPAG00000018148 ENSSPAG00000018155 ENSSPAG00000018163 ENSSPAG00000018180 Percomorphaceae_C ANCESTRAL SPECIES 21 ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000167146 ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000162944 ENSGT01020000230622 ENSGT01030000234893 ENSGT00940000163670.b.a ENSGT00990000204208 ENSGT01000000215671 Eupercaria ANCESTRAL SPECIES 20 ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000167146 ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT01020000230622 ENSGT01030000234893 ENSGT00940000163670.b.a ENSGT00990000204208 ENSGT01000000215671 ENSGT00940000159906.f Tetraodontidae ANCESTRAL SPECIES 18 ENSGT00940000162952.d.b.a ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000183163.b #25 ENSGT00940000171984 ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000159906.f ENSGT00950000182997.b ENSGT00940000158089.b ENSGT01030000234839 ENSGT00940000178471 ENSGT00390000016814.a ENSGT01070000253816.b.c ENSGT00940000156699.i ENSGT00390000006738.b Tetraodon MODERN SPECIES 26 cldn11b (ENSTNIG00000004126) ENSTNIG00000004125 rpl22l1 (ENSTNIG00000002562) ENSTNIG00000002563 TNIK (ENSTNIG00000002564) PLD1 (ENSTNIG00000004569) ENSTNIG00000004568 ENSTNIG00000004567 ENSTNIG00000004566 ENSTNIG00000004565 eif2s3 (ENSTNIG00000004564) klhl15 (ENSTNIG00000004563) apoob (ENSTNIG00000004562) sat1b (ENSTNIG00000004561) acot9.2 (ENSTNIG00000004560) pdha1b (ENSTNIG00000004559) #22 eif1axb (ENSTNIG00000004558) #27 ENSTNIG00000005358 #26 ENSTNIG00000005359 ENSTNIG00000005360 cip2a (ENSTNIG00000005361) chrnd (ENSTNIG00000005362) RAMP3 (ENSTNIG00000000529) pck2 (ENSTNIG00000005363) psme1 (ENSTNIG00000005364) FITM1 (ENSTNIG00000005365) dcaf11 (ENSTNIG00000005366) thtpa (ENSTNIG00000005367) ENSTNIG00000005368 pabpn1 (ENSTNIG00000005369) ngdn (ENSTNIG00000018972) Fugu MODERN SPECIES 1 ENSTRUG00000024361 ENSTRUG00000029298 cldn11b (ENSTRUG00000002558) ENSTRUG00000002825 rpl22l1 (ENSTRUG00000003154) ENSTRUG00000028500 TNIK (ENSTRUG00000003746) PLD1 (ENSTRUG00000005513) ENSTRUG00000024494 ENSTRUG00000006284 eif2s3 (ENSTRUG00000002867) klhl15 (ENSTRUG00000003735) apoob (ENSTRUG00000020497) sat1 (ENSTRUG00000004500) acot9.2 (ENSTRUG00000025401) pdha1b (ENSTRUG00000004842) #22 rps6ka3b (ENSTRUG00000005953) #28 eif1axb (ENSTRUG00000007017) #27 zgc:112982 (ENSTRUG00000030957) #25 ENSTRUG00000021004 cip2a (ENSTRUG00000007460) chrnd (ENSTRUG00000007767) ENSTRUG00000026541 ENSTRUG00000026253 ENSTRUG00000029428 ENSTRUG00000030554 ENSTRUG00000021344 ENSTRUG00000029422 ENSTRUG00000031426 ENSTRUG00000022953 ENSTRUG00000025737 Eupecaria_A ANCESTRAL SPECIES 19 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT01030000234893 ENSGT00940000163670.b.a ENSGT00990000204208 ENSGT01000000215671 ENSGT00940000159906.f ENSGT00940000157755.r Ballan wrasse MODERN SPECIES 247 ENSLBEG00000015410 cldn11b (ENSLBEG00000015436) ENSLBEG00000015504 rpl22l1 (ENSLBEG00000015538) ENSLBEG00000015561 TNIK (ENSLBEG00000015697) PLD1 (ENSLBEG00000016081) ENSLBEG00000016367 ENSLBEG00000016408 ENSLBEG00000016465 eif2s3 (ENSLBEG00000016518) klhl15 (ENSLBEG00000016636) apoob (ENSLBEG00000016692) SAT1 (ENSLBEG00000016728) acot9.2 (ENSLBEG00000016764) pdha1b (ENSLBEG00000016861) #22 ENSLBEG00000017002 rps6ka3b (ENSLBEG00000017057) #28 eif1axb (ENSLBEG00000017217) #27 MAP7D2 (ENSLBEG00000017278) #26 Eupecaria_B ANCESTRAL SPECIES 19 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT01030000234893 ENSGT00940000163670.b.a ENSGT00990000204208 ENSGT01000000215671 ENSGT00940000159906.f ENSGT00940000157755.r Perciformes ANCESTRAL SPECIES 21 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000167146 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00990000204208 ENSGT01000000215671 ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b ENSGT00940000158089.b ENSGT01100000263894 ENSGT01030000234839 Cottioidei ANCESTRAL SPECIES 43 ENSGT00940000162952.d.b.a ENSGT00940000154964.z ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00940000167218 ENSGT00940000166938 ENSGT00940000153251.a ENSGT00940000159794 ENSGT00990000204208 ENSGT01000000215671 ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b ENSGT00940000158089.b Lumpfish MODERN SPECIES 12 cldn11b (ENSCLMG00005015810) ENSCLMG00005015812 rpl22l1 (ENSCLMG00005015813) ENSCLMG00005015816 TNIK (ENSCLMG00005015930) PLD1 (ENSCLMG00005022514) ENSCLMG00005022576 ENSCLMG00005022579 ENSCLMG00005022580 ENSCLMG00005022582 eif2s3 (ENSCLMG00005022585) klhl15 (ENSCLMG00005022591) apoob (ENSCLMG00005022593) sat1b (ENSCLMG00005022594) acot9.2 (ENSCLMG00005022595) pdha1b (ENSCLMG00005022597) #22 rps6ka3b (ENSCLMG00005022625) #28 eif1axb (ENSCLMG00005022745) #27 ENSCLMG00005022747 ENSCLMG00005022748 ENSCLMG00005022753 cip2a (ENSCLMG00005022754) chrnd (ENSCLMG00005022755) ENSCLMG00005022763 ENSCLMG00005022764 ENSCLMG00005022765 ENSCLMG00005022766 ENSCLMG00005022767 ENSCLMG00005022769 ENSCLMG00005022770 ENSCLMG00005022778 Stickleback MODERN SPECIES 100 ENSGACG00000012533 rpl22l1 (ENSGACG00000012539) ENSGACG00000012547 ENSGACG00000012551 TNIK (ENSGACG00000012636) PLD1 (ENSGACG00000012653) ENSGACG00000012668 ENSGACG00000012670 ENSGACG00000012676 eif2s3 (ENSGACG00000012678) ENSGACG00000012719 klhl15 (ENSGACG00000012722) apoob (ENSGACG00000012729) sat1b (ENSGACG00000012745) acot9.2 (ENSGACG00000012775) pdha1b (ENSGACG00000012803) #22 rps6ka3b (ENSGACG00000012811) #28 ENSGACG00000012824 ENSGACG00000012827 eif1axa (ENSGACG00000012829) #27 ENSGACG00000012862 ENSGACG00000012864 ENSGACG00000012869 ENSGACG00000012889 cip2a (ENSGACG00000012895) ENSGACG00000012920 Perciformes_a ANCESTRAL SPECIES 36 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000167146 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00990000204208 ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b ENSGT00940000158089.b ENSGT01100000263894 ENSGT01030000234839 ENSGT00390000016814.a Channel bull blenny MODERN SPECIES 58 cip2a (ENSCGOG00000006875) ENSCGOG00000006880 ENSCGOG00000006881 ENSCGOG00000006889 #25 ENSCGOG00000006918 #27 ENSCGOG00000006932 #28 eif1axb (ENSCGOG00000006934) #27 rps6ka3b (ENSCGOG00000007214) #28 ENSCGOG00000008722 #22 acot9.2 (ENSCGOG00000008848) sat1b (ENSCGOG00000009063) ENSCGOG00000009072 ENSCGOG00000009081 Pike perch MODERN SPECIES 66 cldn11b (ENSSLUG00000025135) ENSSLUG00000025142 rpl22l1 (ENSSLUG00000025147) ENSSLUG00000025150 TNIK (ENSSLUG00000025231) PLD1 (ENSSLUG00000025491) ENSSLUG00000025496 ENSSLUG00000025500 ENSSLUG00000025504 ENSSLUG00000025512 eif2s3 (ENSSLUG00000025517) klhl15 (ENSSLUG00000025521) apoob (ENSSLUG00000025526) SAT1 (ENSSLUG00000025529) acot9.2 (ENSSLUG00000025539) pdha1b (ENSSLUG00000025557) #22 rps6ka3b (ENSSLUG00000025805) #28 eif1axb (ENSSLUG00000025957) #27 ENSSLUG00000025958 #25 ENSSLUG00000025962 si:ch73-264p11.1 (ENSSLUG00000025964) cip2a (ENSSLUG00000025966) chrnd (ENSSLUG00000025974) ENSSLUG00000025980 ENSSLUG00000025982 ENSSLUG00000025984 ENSSLUG00000025988 ENSSLUG00000025992 ENSSLUG00000025993 ENSSLUG00000025994 ENSSLUG00000001456 Eupecaria_C ANCESTRAL SPECIES 19 ENSGT00940000154964.z ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a ENSGT00990000204208 ENSGT01000000215671 ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 17 ENSGT00940000154964.z ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a ENSGT00990000204208 ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b ENSGT00940000158089.b European seabass MODERN SPECIES 27 ENSDLAG00005030333 ENSDLAG00005011123 ENSDLAG00005027293 RPL22L1 (ENSDLAG00005032982) ENSDLAG00005011026 TNIK (ENSDLAG00005010108) PLD1 (ENSDLAG00005007504) ENSDLAG00005030583 ENSDLAG00005007369 ENSDLAG00005028096 EIF2S3 (ENSDLAG00005007326) KLHL15 (ENSDLAG00005007280) SAT1 (ENSDLAG00005032687) apoob (ENSDLAG00005034422) ENSDLAG00005006633 pdha1b (ENSDLAG00005005291) #22 rps6ka3b (ENSDLAG00005002745) #28 EIF1AX (ENSDLAG00005002070) #27 MAP7D2 (ENSDLAG00005033599) #26 ENSDLAG00005018441 #25 ENSDLAG00005002036 ENSDLAG00005002029 ENSDLAG00005002032 ENSDLAG00005029940 ENSDLAG00005001957 ENSDLAG00005001891 ENSDLAG00005031056 ENSDLAG00005003733 ENSDLAG00005003517 ENSDLAG00005021572 ENSDLAG00005003728 Large yellow croaker MODERN SPECIES 494 scn5lab (ENSLCRG00005008654) ENSLCRG00005008655 ASPH (ENSLCRG00005008656) CLVS1 (ENSLCRG00005008658) riok3 (ENSLCRG00005008668) rmc1 (ENSLCRG00005010094) ENSLCRG00005011930 ENSLCRG00005011942 ENSLCRG00005011950 ENSLCRG00005011957 eif2s3 (ENSLCRG00005011960) klhl15 (ENSLCRG00005011997) apoob (ENSLCRG00005011999) sat1b (ENSLCRG00005012000) acot9.2 (ENSLCRG00005012001) pdha1b (ENSLCRG00005012031) #22 rps6ka3b (ENSLCRG00005012483) #28 eif1axb (ENSLCRG00005014231) #27 ENSLCRG00005014232 ENSLCRG00005014233 #25 ENSLCRG00005014234 zgc:112408 (ENSLCRG00005014238) si:ch73-264p11.1 (ENSLCRG00005014239) cip2a (ENSLCRG00005014244) chrnd (ENSLCRG00005014431) ENSLCRG00005015138 ENSLCRG00005015140 ENSLCRG00005015144 ENSLCRG00005015145 ENSLCRG00005015146 ENSLCRG00005015284 Gilthead seabream MODERN SPECIES 10 cul1a (ENSSAUG00010019856) ENSSAUG00010019851 ENSSAUG00010019850 cldn11b (ENSSAUG00010019849) ENSSAUG00010019840 rpl22l1 (ENSSAUG00010019828) ENSSAUG00010019827 ENSSAUG00010019826 ENSSAUG00010019824 ENSSAUG00010019822 eif2s3 (ENSSAUG00010019821) klhl15 (ENSSAUG00010019818) apoob (ENSSAUG00010019817) SAT1 (ENSSAUG00010019816) acot9.2 (ENSSAUG00010019801) pdha1b (ENSSAUG00010018922) #22 rps6ka3b (ENSSAUG00010018399) #28 eif1axa (ENSSAUG00010018382) #27 ENSSAUG00010018376 #26 ENSSAUG00010018347 ENSSAUG00010018338 #25 ENSSAUG00010018333 ENSSAUG00010018332 zgc:112408 (ENSSAUG00010018326) ENSSAUG00010018320 ENSSAUG00010018319 cip2a (ENSSAUG00010018314) ENSSAUG00010018308 ENSSAUG00010018304 ENSSAUG00010018302 chrnd (ENSSAUG00010017696) Percomorphaceae_D ANCESTRAL SPECIES 21 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT01030000235646 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000162944 ENSGT01020000230622 ENSGT01030000234893 ENSGT00940000163670.b.a ENSGT00990000204208 ENSGT01000000215671 ENSGT00940000163670.a Anabantaria ANCESTRAL SPECIES 22 ENSGT00940000162952.d.b.a ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT01030000235646 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000162944 ENSGT00940000163670.b.a ENSGT00940000163670.a ENSGT00990000204208 ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b Anabantoidei ANCESTRAL SPECIES 20 ENSGT00940000154964.z ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT01030000235646 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a ENSGT00940000162944 ENSGT00990000204208 ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b ENSGT00940000158089.b Climbing perch MODERN SPECIES 11 ENSATEG00000021701 cldn11b (ENSATEG00000021669) ENSATEG00000021661 rpl22l1 (ENSATEG00000021655) ENSATEG00000021651 TNIK (ENSATEG00000021510) PLD1 (ENSATEG00000021446) ENSATEG00000029348 ENSATEG00000021401 ENSATEG00000021387 EIF2S3 (ENSATEG00000021353) KLHL15 (ENSATEG00000021306) apoob (ENSATEG00000021274) SAT1 (ENSATEG00000027737) acot9.2 (ENSATEG00000021219) pdha1b (ENSATEG00000021171) #22 rps6ka3b (ENSATEG00000021130) #28 ENSATEG00000021109 #27 ENSATEG00000029236 ENSATEG00000021059 #25 ENSATEG00000021034 si:ch73-264p11.1 (ENSATEG00000027625) cip2a (ENSATEG00000021007) ENSATEG00000020988 ENSATEG00000020914 ENSATEG00000025347 ENSATEG00000020895 ENSATEG00000020949 ENSATEG00000020928 ENSATEG00000020859 ENSATEG00000020838 Siamese fighting fish MODERN SPECIES 15 ENSBSLG00000022762 cldn11b (ENSBSLG00000022802) rpl22l1 (ENSBSLG00000022834) ENSBSLG00000022874 TNIK (ENSBSLG00000022922) PLD1 (ENSBSLG00000023303) ENSBSLG00000023424 ENSBSLG00000023425 ENSBSLG00000023430 ENSBSLG00000023432 eif2s3 (ENSBSLG00000023435) klhl15 (ENSBSLG00000023568) apoob (ENSBSLG00000023588) sat1b (ENSBSLG00000023650) acot9.2 (ENSBSLG00000023878) pdha1b (ENSBSLG00000023974) #22 rps6ka3b (ENSBSLG00000024096) #28 eif1axa (ENSBSLG00000000507) #27 ENSBSLG00000000545 #25 si:ch73-264p11.1 (ENSBSLG00000000573) cip2a (ENSBSLG00000000647) chrnd (ENSBSLG00000000807) ENSBSLG00000000902 ENSBSLG00000000905 ENSBSLG00000001196 ENSBSLG00000001229 ENSBSLG00000001273 ENSBSLG00000001327 vipr2 (ENSBSLG00000002174) ENSBSLG00000002300 ENSBSLG00000002402 Zig-zag eel MODERN SPECIES 84 ENSMAMG00000024768 PLD1 (ENSMAMG00000008804) TNIK (ENSMAMG00000008652) ENSMAMG00000025758 rpl22l1 (ENSMAMG00000027001) ENSMAMG00000008571 cldn11b (ENSMAMG00000008567) ENSMAMG00000024458 ENSMAMG00000027758 ENSMAMG00000008523 ENSMAMG00000028670 ENSMAMG00000008465 ENSMAMG00000008409 ENSMAMG00000026991 ENSMAMG00000008372 pdha1b (ENSMAMG00000008314) #22 rps6ka3b (ENSMAMG00000008244) #28 ENSMAMG00000008210 #27 ENSMAMG00000008191 ENSMAMG00000008162 ENSMAMG00000008156 ENSMAMG00000008116 ENSMAMG00000027653 ENSMAMG00000008050 ENSMAMG00000008024 ENSMAMG00000027419 ENSMAMG00000026304 ENSMAMG00000007995 ENSMAMG00000027562 ENSMAMG00000025296 ENSMAMG00000007909 Carangaria ANCESTRAL SPECIES 21 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT01030000235646 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00970000198434 ENSGT01020000230622 ENSGT01030000234893 ENSGT00940000163670.b.a ENSGT00990000204208 ENSGT01000000215671 Carangaria_A ANCESTRAL SPECIES 15 ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000172693 ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT01030000235646 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00970000198434 ENSGT01020000230622 ENSGT01030000234893 ENSGT00940000163670.b.a ENSGT00990000204208 ENSGT00940000163670.a Seriola ANCESTRAL SPECIES 93 ENSGT00940000154964.z ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a Yellowtail amberjack MODERN SPECIES 3269 cldn11b (ENSSLDG00000009470) ENSSLDG00000009454 rpl22l1 (ENSSLDG00000009433) ENSSLDG00000009425 TNIK (ENSSLDG00000009349) PLD1 (ENSSLDG00000009257) ENSSLDG00000009061 ENSSLDG00000009013 ENSSLDG00000008919 ENSSLDG00000008895 eif2s3 (ENSSLDG00000008861) klhl15 (ENSSLDG00000008828) apoob (ENSSLDG00000008807) sat1b (ENSSLDG00000008762) acot9.2 (ENSSLDG00000008700) pdha1b (ENSSLDG00000008595) #22 rps6ka3b (ENSSLDG00000008512) #28 eif1axb (ENSSLDG00000008477) #27 ENSSLDG00000008459 #25 ENSSLDG00000008434 ENSSLDG00000008415 cip2a (ENSSLDG00000008285) ENSSLDG00000008244 ENSSLDG00000008239 ENSSLDG00000008228 ENSSLDG00000008212 ENSSLDG00000008099 ENSSLDG00000008058 ENSSLDG00000008008 ENSSLDG00000007984 ssr1 (ENSSLDG00000007929) Greater amberjack MODERN SPECIES 232 ENSSDUG00000003267 cldn11b (ENSSDUG00000003286) ENSSDUG00000003298 rpl22l1 (ENSSDUG00000003315) ENSSDUG00000003339 TNIK (ENSSDUG00000003392) PLD1 (ENSSDUG00000003806) ENSSDUG00000003923 ENSSDUG00000003976 ENSSDUG00000003953 eif2s3 (ENSSDUG00000003993) klhl15 (ENSSDUG00000004040) apoob (ENSSDUG00000004092) sat1b (ENSSDUG00000004109) acot9.2 (ENSSDUG00000004138) pdha1b (ENSSDUG00000004167) #22 rps6ka3b (ENSSDUG00000004281) #28 eif1axb (ENSSDUG00000004342) #27 ENSSDUG00000004371 #25 ENSSDUG00000004408 si:ch73-264p11.1 (ENSSDUG00000004463) cip2a (ENSSDUG00000004494) ENSSDUG00000004514 ENSSDUG00000004529 ENSSDUG00000004545 ENSSDUG00000004552 ENSSDUG00000004565 Barramundi perch MODERN SPECIES 84 cldn11b (ENSLCAG00010025391) ENSLCAG00010025400 rpl22l1 (ENSLCAG00010025405) ENSLCAG00010025413 TNIK (ENSLCAG00010025747) PLD1 (ENSLCAG00010026279) ENSLCAG00010026523 ENSLCAG00010026524 ENSLCAG00010026527 ENSLCAG00010026530 eif2s3 (ENSLCAG00010026535) klhl15 (ENSLCAG00010026543) apoob (ENSLCAG00010026548) sat1b (ENSLCAG00010026550) acot9.2 (ENSLCAG00010026553) pdha1b (ENSLCAG00010026561) #22 rps6ka3b (ENSLCAG00010026763) #28 eif1axb (ENSLCAG00010026993) #27 ENSLCAG00010026996 ENSLCAG00010026998 #25 ENSLCAG00010027003 zgc:112408 (ENSLCAG00010027005) ENSLCAG00010027007 cip2a (ENSLCAG00010027009) chrnd (ENSLCAG00010027017) ENSLCAG00010027028 ENSLCAG00010027032 ENSLCAG00010027034 ENSLCAG00010027035 ENSLCAG00010027036 ENSLCAG00010027037 Pleuronectoidei ANCESTRAL SPECIES 12 ENSGT00940000154964.z ENSGT00890000139496.b ENSGT00940000155893.a ENSGT00940000154509 ENSGT00390000003738.b.d.a ENSGT00950000183196.B.f ENSGT00940000155015.g.a ENSGT00940000161266 ENSGT00730000111293 ENSGT00940000156456 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.f #28 ENSGT00390000008256 #27 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000171984 ENSGT00940000153251.a ENSGT00940000159794 ENSGT00970000198434 ENSGT00940000163670.b.a ENSGT00990000204208 ENSGT01000000215671 ENSGT00940000159906.f ENSGT00940000157755.r ENSGT00950000182997.b ENSGT00940000158089.b Tongue sole MODERN SPECIES 13 cldn11b (ENSCSEG00000016055) ENSCSEG00000016043 rpl22l1 (ENSCSEG00000015879) ENSCSEG00000015853 TNIK (ENSCSEG00000015735) PLD1 (ENSCSEG00000015688) ENSCSEG00000015676 ENSCSEG00000015669 ENSCSEG00000015658 eif2s3 (ENSCSEG00000015632) klhl15 (ENSCSEG00000015599) ENSCSEG00000015582 apoob (ENSCSEG00000015570) SAT1 (ENSCSEG00000015551) acot9.2 (ENSCSEG00000015508) pdha1b (ENSCSEG00000015446) #22 rps6ka3b (ENSCSEG00000015334) #28 eif1axb (ENSCSEG00000015312) #27 ENSCSEG00000015303 ENSCSEG00000015295 lsm5 (ENSCSEG00000015286) psme2 (ENSCSEG00000015276) ENSCSEG00000015262 irf9 (ENSCSEG00000015254) u2surp (ENSCSEG00000015150) pcolce2b (ENSCSEG00000015120) trpc1 (ENSCSEG00000015097) CHST2 (ENSCSEG00000015090) dipk2ab (ENSCSEG00000015087) plod2 (ENSCSEG00000015021) ENSCSEG00000014990 Turbot MODERN SPECIES 13 ENSSMAG00000028898 ENSSMAG00000011846 ENSSMAG00000011883 ENSSMAG00000011952 ENSSMAG00000027407 ENSSMAG00000012113 ENSSMAG00000029677 ENSSMAG00000012144 ENSSMAG00000012161 ENSSMAG00000009528 cip2a (ENSSMAG00000009573) ENSSMAG00000009652 ENSSMAG00000009669 ENSSMAG00000009714 #25 eif1axb (ENSSMAG00000009834) #27 ENSSMAG00000009879 #22 ENSSMAG00000009979 #28 acot9.2 (ENSSMAG00000010044) SAT1 (ENSSMAG00000010106) apoob (ENSSMAG00000030113) KLHL15 (ENSSMAG00000010151) EIF2S3 (ENSSMAG00000010192) ENSSMAG00000010225 ENSSMAG00000010241 PLD1 (ENSSMAG00000010266) TNIK (ENSSMAG00000008153) ENSSMAG00000031145 rpl22l1 (ENSSMAG00000008211) ENSSMAG00000008228 cldn11b (ENSSMAG00000023927) ENSSMAG00000026407 Pinecone sodierfish MODERN SPECIES 12 cul1a (ENSMMDG00005021328) cldn11b (ENSMMDG00005021322) ENSMMDG00005021318 rpl22l1 (ENSMMDG00005021313) ENSMMDG00005021310 ENSMMDG00005021256 ENSMMDG00005020772 ENSMMDG00005020737 ENSMMDG00005020734 ENSMMDG00005020729 eif2s3 (ENSMMDG00005020684) klhl15 (ENSMMDG00005020671) apoob (ENSMMDG00005020668) sat1b (ENSMMDG00005020664) acot9.2 (ENSMMDG00005020007) pdha1b (ENSMMDG00005019137) #22 rps6ka3b (ENSMMDG00005014542) #28 eif1axb (ENSMMDG00005014437) #27 zgc:112982 (ENSMMDG00005014429) #25 ENSMMDG00005014380 zgc:112408 (ENSMMDG00005014371) ENSMMDG00005014364 cip2a (ENSMMDG00005014067) chrnd (ENSMMDG00005014054) ENSMMDG00005014050 ENSMMDG00005014048 ENSMMDG00005014046 ENSMMDG00005014043 ENSMMDG00005014031 vipr2 (ENSMMDG00005013952) ENSMMDG00005013947 Cod MODERN SPECIES 15 ENSGMOG00000007557 ENSGMOG00000034460 ENSGMOG00000024783 ENSGMOG00000007561 ENSGMOG00000029655 ENSGMOG00000004233 ENSGMOG00000004236 ENSGMOG00000036824 EIF2S3 (ENSGMOG00000004311) ENSGMOG00000004337 ENSGMOG00000004355 ENSGMOG00000006922 SAT1 (ENSGMOG00000032336) ENSGMOG00000025106 ENSGMOG00000004381 pdha1b (ENSGMOG00000004411) #22 rps6ka3b (ENSGMOG00000004426) #28 ENSGMOG00000036612 eif1axb (ENSGMOG00000004469) #27 ENSGMOG00000033880 ENSGMOG00000031715 ENSGMOG00000029023 ENSGMOG00000023804 ENSGMOG00000010863 ENSGMOG00000030781 ENSGMOG00000007643 ENSGMOG00000034157 ENSGMOG00000034915 ENSGMOG00000007655 ENSGMOG00000027383 CPA6 (ENSGMOG00000017058) Protacanthopterygii ANCESTRAL SPECIES 70 ENSGT01030000234598.a.a.a.a ENSGT00940000160853 ENSGT01100000263502.A.a.a.b.a.a ENSGT00500000045505.b ENSGT00390000000076 ENSGT00390000011600 ENSGT00510000046981.b.a.d ENSGT00940000161266 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00940000159370.e.b #28 ENSGT00390000008256.vd.b #27 ENSGT01030000235646 ENSGT00940000159370.e.a #28 ENSGT00390000008256.wd #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000159794 ENSGT00940000163670.b.a.gb ENSGT00940000163670.a ENSGT00940000159906.f ENSGT00940000157755.r Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 1010 ENSGT00530000063174.a.k.c.a.a #22 ENSGT00940000159370.e.b #28 ENSGT00390000008256.vd.b.b #27 ENSGT00950000183163.b.m #25 ENSGT00940000166938.c ENSGT00940000155920.k.a Salmoninae_a ANCESTRAL SPECIES ENSGT00530000063174.a.k.c.a.a #22 Salmo ANCESTRAL SPECIES 3 ENSGT00390000000076 ENSGT00390000011600.g ENSGT00990000210368 ENSGT00940000175687.b ENSGT00940000161266.b ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801.f ENSGT00940000159116.d ENSGT00530000063666.b.eb.d ENSGT00950000183121.b.b.b.b.w.f ENSGT00390000005330.h ENSGT00530000063174.a.k.d #22 ENSGT00940000159370.e.b #28 ENSGT00390000008256.vd.b.b #27 ENSGT00530000063174.a.k.c.a.a #22 ENSGT00940000159370.e.a #28 ENSGT00390000008256.wd.a.b #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b.m #25 ENSGT00940000166938.c ENSGT00940000155920.k.a ENSGT00940000159794 ENSGT00940000163670.b.a.gb.b.b ENSGT00940000159906.f.g.a ENSGT00940000157755.r.f ENSGT00950000182997.b.l.a ENSGT00940000158089.b.e ENSGT01090000260281.a ENSGT00990000206793.a.b.b ENSGT00390000016814.a.c River trout MODERN SPECIES 156 ENSSTUG00000035151 #22 Atlantic salmon MODERN SPECIES 21 ENSSSAG00000094346 ENSSSAG00000077888 ENSSSAG00000077895 apod (ENSSSAG00000077906) ENSSSAG00000080287 ENSSSAG00000077916 ENSSSAG00000106166 ENSSSAG00000077932 KLHL15 (ENSSSAG00000077983) ENSSSAG00000099404 apoob (ENSSSAG00000097184) ENSSSAG00000112612 SAT1 (ENSSSAG00000078009) ACOT9 (ENSSSAG00000109432) sat1b (ENSSSAG00000111429) pdha1b (ENSSSAG00000080177) #22 RPS6KA3 (ENSSSAG00000077150) #28 ENSSSAG00000076877 #27 ENSSSAG00000099356 #26 ENSSSAG00000078061 #25 ENSSSAG00000088995 ENSSSAG00000078074 ENSSSAG00000078092 kiaa1524 (ENSSSAG00000078099) ENSSSAG00000078120 ENSSSAG00000121263 ENSSSAG00000116217 ENSSSAG00000118236 ENSSSAG00000078131 ENSSSAG00000062619 ENSSSAG00000078145 Huchen MODERN SPECIES 1322 ENSHHUG00000006571 #37 pdha1b (ENSHHUG00000006779) #22 ENSHHUG00000006827 #28 ENSHHUG00000007832 #27 ENSHHUG00000007936 ENSHHUG00000007942 #25 ENSHHUG00000007965 cip2a (ENSHHUG00000008008) ENSHHUG00000008025 pawr (ENSHHUG00000008029) ENSHHUG00000008038 Salmoninae ANCESTRAL SPECIES 678 ENSGT00940000160066.y.b ENSGT00940000157214.f.b.c ENSGT00530000063174.a.k.c.a.b #22 ENSGT00890000139463.b.b.a.c ENSGT00940000157727.x.b ENSGT00390000013106 ENSGT00940000158630.g.b.a ENSGT00940000155032.k.f ENSGT00390000009747.h ENSGT00390000007726.a.a.h ENSGT00950000183137.a.k.c ENSGT00390000005639.a.b.d.a.d ENSGT00530000063586.a.o.b Salmoninae_a ANCESTRAL SPECIES 71 ENSGT00940000159406.g ENSGT00940000159378 ENSGT00390000011010.a.b ENSGT00940000158924 ENSGT00940000158284.wb ENSGT00940000159342.b.h ENSGT00390000010763 ENSGT00800000124177 ENSGT00530000063564.a.q ENSGT00940000164383 ENSGT00940000157798.b.f.a.a ENSGT00940000155133.a.a.a ENSGT00940000161964.g.a ENSGT00940000160066.y.b ENSGT00940000157214.f.b.c ENSGT00530000063174.a.k.c.a.b #22 ENSGT00890000139463.b.b.a.c ENSGT00940000157727.x.b ENSGT00390000013106 ENSGT00940000158630.g.b.a ENSGT00940000155032.k.f ENSGT00390000009747.h ENSGT00390000007726.a.a.h ENSGT00950000183137.a.k.c ENSGT00390000005639.a.b.d.a.d ENSGT00530000063586.a.o.b ENSGT00940000153692.B.b.f ENSGT00950000183015.B.a.b.k.a ENSGT00940000165944.b ENSGT00940000156026.e ENSGT00730000111333.a Salmo ANCESTRAL SPECIES 29 ENSGT00390000000403.f ENSGT00940000159406.g ENSGT00940000159378 ENSGT00390000011010.a.b ENSGT00940000158924 ENSGT00940000158284.wb ENSGT00940000159342.b.h ENSGT00390000010763 ENSGT00800000124177 ENSGT00530000063564.a.q ENSGT00940000164383 ENSGT00940000157798.b.f.a.a ENSGT00940000155133.a.a.a ENSGT00940000160066.y.b ENSGT00940000157214.f.b.c ENSGT00530000063174.a.k.c.a.b #22 ENSGT00890000139463.b.b.a.c ENSGT00940000157727.x.b ENSGT00390000013106 ENSGT00940000158630.g.b.a ENSGT00940000155032.k.f ENSGT00390000009747.h ENSGT00390000007726.a.a.h ENSGT00950000183137.a.k.c ENSGT00390000005639.a.b.d.a.d ENSGT00530000063586.a.o.b ENSGT00940000153692.B.b.f ENSGT00950000183015.B.a.b.k.a ENSGT00940000165944.b ENSGT00940000156026.e ENSGT00730000111333.a Atlantic salmon MODERN SPECIES 9 ENSSSAG00000040812 sirt1 (ENSSSAG00000040786) dnajc12 (ENSSSAG00000040776) COX5B (ENSSSAG00000040757) herc4 (ENSSSAG00000039908) fam83h (ENSSSAG00000081215) ENSSSAG00000081122 lrrfip2 (ENSSSAG00000081070) abcc2 (ENSSSAG00000080954) ENSSSAG00000108258 ENSSSAG00000099422 ENSSSAG00000080902 ENSSSAG00000080900 ENSSSAG00000080897 ENSSSAG00000101192 ENSSSAG00000080888 #22 prdm8 (ENSSSAG00000085200) ENSSSAG00000080861 rrp12 (ENSSSAG00000080485) ENSSSAG00000086687 zdhhc16a (ENSSSAG00000080436) sufu (ENSSSAG00000111263) oga (ENSSSAG00000080089) ENSSSAG00000080066 ENSSSAG00000116511 ENSSSAG00000079953 ENSSSAG00000084238 mapk8a (ENSSSAG00000079743) ENSSSAG00000079715 ENSSSAG00000079713 LRRC18 (ENSSSAG00000079709) River trout MODERN SPECIES 35 SIRT1 (ENSSTUG00000017950) dnajc12 (ENSSTUG00000026267) cox5b2 (ENSSTUG00000026278) HERC4 (ENSSTUG00000026361) ENSSTUG00000026635 ENSSTUG00000026644 ENSSTUG00000026671 mlh1 (ENSSTUG00000026736) lrrfip2 (ENSSTUG00000027096) ENSSTUG00000027613 KCNIP2 (ENSSTUG00000031971) ENSSTUG00000032024 ENSSTUG00000032044 ENSSTUG00000032071 GDF10 (ENSSTUG00000032120) ENSSTUG00000032133 #22 prdm8 (ENSSTUG00000032239) ENSSTUG00000032249 rrp12 (ENSSTUG00000032472) ubtd1b (ENSSTUG00000032762) zdhhc16a (ENSSTUG00000032774) ENSSTUG00000032789 sufu (ENSSTUG00000032803) oga (ENSSTUG00000032916) ENSSTUG00000035193 ldb1a (ENSSTUG00000035218) ENSSTUG00000035312 mapk8a (ENSSTUG00000035357) ARHGAP22 (ENSSTUG00000036227) ENSSTUG00000036250 LRRC18 (ENSSTUG00000036274) Huchen MODERN SPECIES 435 ENSHHUG00000025706 ENSHHUG00000025702 ENSHHUG00000025692 ENSHHUG00000025689 ENSHHUG00000025685 GDF10 (ENSHHUG00000025670) ENSHHUG00000025656 #22 prdm8 (ENSHHUG00000025652) ENSHHUG00000025634 rrp12 (ENSHHUG00000025592) UBTD1 (ENSHHUG00000025576) zdhhc16a (ENSHHUG00000025557) sufu (ENSHHUG00000025498) Salmoninae ANCESTRAL SPECIES 563 ENSGT00950000183121.b.b.b.b.w.e.b ENSGT00390000005330.g ENSGT00530000063174.a.k.c.b #22 ENSGT00940000159370.e.a #28 ENSGT00390000008256.wd.a.b #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b.n #25 ENSGT00940000166938.d ENSGT00940000155920.k.b ENSGT00940000153251.a ENSGT00940000163670.b.a.hb ENSGT01070000255370 ENSGT00940000163670.b.a.gb.a ENSGT00940000163670.a ENSGT00940000159906.f.g.a ENSGT00940000157755.r.e ENSGT00950000182997.b.l.b.b.b Salmoninae_a ANCESTRAL SPECIES 35 ENSGT00500000045505.b.g ENSGT00390000000076 ENSGT00390000011600.g ENSGT00990000210368 ENSGT00940000175687.b ENSGT00390000011600.h ENSGT00510000046981.b.a.d ENSGT00940000175687.a ENSGT00940000161266.a.b ENSGT00550000074801.e ENSGT00940000159116.c ENSGT00530000063666.b.eb.c ENSGT00950000183121.b.b.b.b.w.e.a ENSGT00950000183121.b.b.b.b.w.e.b ENSGT00390000005330.g ENSGT00530000063174.a.k.c.b #22 ENSGT00940000159370.e.a #28 ENSGT00390000008256.wd.a.b #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b.n #25 ENSGT00940000166938.d ENSGT00940000155920.k.b ENSGT00940000153251.a ENSGT00940000163670.b.a.hb ENSGT01090000260281.b.a ENSGT00990000206793.a.b.a ENSGT00390000016814.a.d ENSGT01070000253816.b.c.b ENSGT00950000183196.B.e.e.a ENSGT00390000003738.b.d.a.d ENSGT00940000154509.ad.a Oncorhynchus ANCESTRAL SPECIES 27 ENSGT00990000205902.b.b ENSGT01030000234598.a.a.a.a.c ENSGT00940000160853.f ENSGT01100000263502.A.a.a.b.a.a ENSGT00500000045505.b.g ENSGT00390000000076.z.b ENSGT00390000011600.h ENSGT00510000046981.b.a.d ENSGT00940000175687.a ENSGT00940000161266.a.b ENSGT00550000074801.e ENSGT00940000159116.c ENSGT00530000063666.b.eb.c ENSGT00950000183121.b.b.b.b.w.e.b ENSGT00390000005330.g ENSGT00530000063174.a.k.c.b #22 ENSGT00940000159370.e.a #28 ENSGT00390000008256.wd.a.b #27 ENSGT00390000008256.vd.b.b #27 ENSGT01030000235646.a ENSGT00950000183163.b.n #25 ENSGT00940000166938.d ENSGT00940000153251.a ENSGT00940000163670.b.a.hb ENSGT00950000182997.b.l.b.b.a ENSGT00940000158089.b.f ENSGT01090000260281.b.b.b ENSGT00990000206793.a.a ENSGT00390000016814.a.d ENSGT01070000253816.b.c.b ENSGT00950000183196.B.e.e.a Oncorhynchus_a ANCESTRAL SPECIES 27 ENSGT00940000155886.r #24 ENSGT00990000205902.b.b ENSGT01030000234598.a.a.a.a.c ENSGT00940000160853.f ENSGT01100000263502.A.a.a.b.a.a ENSGT00500000045505.b.g ENSGT00390000000076.z.b ENSGT00510000046981.b.a.d ENSGT00940000175687.a ENSGT00940000161266.a.b ENSGT00550000074801.e ENSGT00940000159116.c ENSGT00530000063666.b.eb.c ENSGT00950000183121.b.b.b.b.w.e.b ENSGT00390000005330.g ENSGT00530000063174.a.k.c.b #22 ENSGT00940000159370.e.a #28 ENSGT00390000008256.wd.a.b #27 ENSGT00950000183163.b.n #25 ENSGT00940000166938.d ENSGT00940000153251.a ENSGT00940000163670.b.a.hb ENSGT00990000204208 ENSGT00940000157755.r.e ENSGT00950000182997.b.l.b.b.a ENSGT00940000158089.b.f ENSGT01090000260281.b.b.b ENSGT00990000206793.a.a ENSGT00390000016814.a.d ENSGT01070000253816.b.c.b ENSGT00950000183196.B.e.e.a Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 2992 ENSOTSG00005040480 ENSOTSG00005040478 #24 ENSOTSG00005040477 ENSOTSG00005040476 ENSOTSG00005040475 and1 (ENSOTSG00005040474) ENSOTSG00005040472 apodb (ENSOTSG00005040470) ENSOTSG00005040467 ENSOTSG00005040463 eif2s3 (ENSOTSG00005040462) klhl15 (ENSOTSG00005040460) APOO (ENSOTSG00005040459) ACOT9 (ENSOTSG00005039546) sat1b (ENSOTSG00005039542) ENSOTSG00005039537 #22 ENSOTSG00005039535 #28 ENSOTSG00005045813 #27 ENSOTSG00005045810 ENSOTSG00005045809 ENSOTSG00005045808 ENSOTSG00005045807 sft2d2b (ENSOTSG00005045806) ENSOTSG00005045805 ENSOTSG00005045804 eed (ENSOTSG00005045802) hikeshi (ENSOTSG00005045801) pwp2h (ENSOTSG00005045800) ENSOTSG00005045796 ENSOTSG00005045795 ENSOTSG00005045794 Chinook salmon MODERN SPECIES 21 tagln3b (ENSOTSG00005011653) ENSOTSG00005011651 ythdf3 (ENSOTSG00005011650) ENSOTSG00005011649 ENSOTSG00005011647 ENSOTSG00005011645 #24 ENSOTSG00005011642 ENSOTSG00005011641 and1 (ENSOTSG00005011640) ENSOTSG00005011639 apodb (ENSOTSG00005011638) eif2s3 (ENSOTSG00005011637) klhl15 (ENSOTSG00005011636) ACOT9 (ENSOTSG00005011625) sat1b (ENSOTSG00005011622) ENSOTSG00005011619 #22 ENSOTSG00005011618 #28 ENSOTSG00005011617 #27 ENSOTSG00005011616 ENSOTSG00005011614 ENSOTSG00005011612 vipr2 (ENSOTSG00005011610) ENSOTSG00005011609 ENSOTSG00005011608 msl2b (ENSOTSG00005011607) tnfsf10 (ENSOTSG00005011606) tnika (ENSOTSG00005009472) ENSOTSG00005009461 rpl22l1 (ENSOTSG00005009458) ENSOTSG00005009445 ENSOTSG00005009444 Coho salmon MODERN SPECIES 2 ENSOKIG00005010104 tfr1b (ENSOKIG00005010144) TNK2 (ENSOKIG00005010208) ENSOKIG00005010287 and1 (ENSOKIG00005010301) cops9 (ENSOKIG00005010335) apodb (ENSOKIG00005002065) ENSOKIG00005002079 ENSOKIG00005002103 ENSOKIG00005002244 ENSOKIG00005002630 KLHL15 (ENSOKIG00005002642) apoob (ENSOKIG00005002661) SAT1 (ENSOKIG00005002682) ACOT9 (ENSOKIG00005002720) pdha1b (ENSOKIG00005002760) #22 ENSOKIG00005002940 #28 ENSOKIG00005003103 #27 ENSOKIG00005003130 #25 ENSOKIG00005003148 cip2a (ENSOKIG00005003212) ENSOKIG00005003381 ENSOKIG00005003405 ENSOKIG00005003437 ENSOKIG00005003441 ENSOKIG00005003454 ENSOKIG00005003522 ENSOKIG00005003688 ENSOKIG00005003705 ENSOKIG00005003708 ENSOKIG00005003710 Rainbow trout MODERN SPECIES 6 ENSOMYG00000052467 ENSOMYG00000071365 and1 (ENSOMYG00000010833) ENSOMYG00000010821 apodb (ENSOMYG00000010815) ENSOMYG00000059936 ENSOMYG00000070606 ENSOMYG00000010797 ENSOMYG00000070468 ENSOMYG00000010773 KLHL15 (ENSOMYG00000010735) ENSOMYG00000067769 APOO (ENSOMYG00000010708) ACOT9 (ENSOMYG00000010388) sat1 (ENSOMYG00000010129) ENSOMYG00000009989 #22 ENSOMYG00000077429 RPS6KA3 (ENSOMYG00000048494) #28 ENSOMYG00000009940 #27 ENSOMYG00000009891 #25 ENSOMYG00000009814 ENSOMYG00000061987 ENSOMYG00000009741 ENSOMYG00000059277 ENSOMYG00000009689 ENSOMYG00000075911 ENSOMYG00000009544 ENSOMYG00000063126 ENSOMYG00000003890 ENSOMYG00000061118 ENSOMYG00000009518 Salmoninae ANCESTRAL SPECIES 157 ENSGT01030000234598.a.a.a.a.d ENSGT01030000234826 ENSGT00940000159828.b.a ENSGT00500000045505.b.h ENSGT00980000198875.g.a ENSGT00390000011600.h ENSGT00940000161266.b ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801.f ENSGT00940000159116.d ENSGT00530000063666.b.eb.d ENSGT00950000183121.b.b.b.b.w.f ENSGT00390000005330.h ENSGT00940000153430.a.a.i #37 ENSGT00530000063174.a.k.d #22 ENSGT00940000159794 ENSGT00940000163670.b.a.gb.b.b ENSGT00940000159906.f.h ENSGT00940000157755.r.f ENSGT00950000182997.b.l.a ENSGT00940000158089.b.e ENSGT01090000260281.a ENSGT00990000206793.a.b.b ENSGT00390000016814.a.c ENSGT01070000253816.b.c.a ENSGT00940000156699.i ENSGT00940000155015.g.a ENSGT00950000183196.B.e.e.b ENSGT00940000163015 ENSGT00390000003738.b.d.a.c Salmoninae_a ANCESTRAL SPECIES 32 ENSGT00940000155886.q #24 ENSGT00940000159562 #23 ENSGT00990000205902.a ENSGT01030000234598.a.a.a.a.d ENSGT00940000160853.e ENSGT00940000159828.b.a ENSGT00500000045505.b.h ENSGT00940000161266.b ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801.f ENSGT00940000159116.d ENSGT00530000063666.b.eb.d ENSGT00950000183121.b.b.b.b.w.f ENSGT00390000005330.h ENSGT00530000063174.a.k.d #22 ENSGT00940000159370.e.b #28 ENSGT00390000008256.vd.b.b #27 ENSGT01030000235646.a ENSGT00390000008256.wd.a.a #27 ENSGT00950000183163.b.m #25 ENSGT00940000166938.c ENSGT00940000155920.k.a ENSGT00940000159794 ENSGT00940000163670.b.a.gb.b.b ENSGT00940000159906.f.h ENSGT00940000157755.r.f ENSGT00950000182997.b.l.a ENSGT00940000158089.b.e ENSGT01090000260281.a ENSGT00990000206793.a.b.b Salmo ANCESTRAL SPECIES 3 ENSGT00940000160853.e ENSGT00940000159828.b.a ENSGT00500000045505.b.h ENSGT00390000000076 ENSGT00390000011600.g ENSGT00990000210368 ENSGT00940000175687.b ENSGT00940000161266.b ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801.f ENSGT00940000159116.d ENSGT00530000063666.b.eb.d ENSGT00950000183121.b.b.b.b.w.f ENSGT00390000005330.h ENSGT00530000063174.a.k.d #22 ENSGT00940000159370.e.b #28 ENSGT00390000008256.vd.b.b #27 ENSGT00530000063174.a.k.c.a.a #22 ENSGT00940000159370.e.a #28 ENSGT00390000008256.wd.a.b #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b.m #25 ENSGT00940000166938.c ENSGT00940000155920.k.a ENSGT00940000159794 ENSGT00940000163670.b.a.gb.b.b ENSGT00940000159906.f.g.a ENSGT00940000157755.r.f ENSGT00950000182997.b.l.a ENSGT00940000158089.b.e Atlantic salmon MODERN SPECIES 10 and1 (ENSSSAG00000080293) cops9 (ENSSSAG00000080290) otos (ENSSSAG00000114510) ENSSSAG00000116263 ENSSSAG00000112922 ENSSSAG00000108841 ENSSSAG00000080284 ENSSSAG00000080282 ENSSSAG00000080279 if2g (ENSSSAG00000080260) ENSSSAG00000084918 KLHL15 (ENSSSAG00000080245) ENSSSAG00000080233 SAT1 (ENSSSAG00000080231) ACOT9 (ENSSSAG00000078036) ENSSSAG00000076899 #22 RPS6KA3 (ENSSSAG00000078964) #28 ENSSSAG00000098060 EIF1AX (ENSSSAG00000078822) #27 ENSSSAG00000082016 MAP7D2 (ENSSSAG00000118996) #26 ENSSSAG00000078800 #25 ENSSSAG00000078773 ENSSSAG00000109282 ENSSSAG00000078490 ENSSSAG00000082411 ENSSSAG00000078463 ENSSSAG00000107371 ENSSSAG00000108490 ENSSSAG00000077589 ENSSSAG00000077515 River trout MODERN SPECIES 11 adipoqa (ENSSTUG00000016043) and1 (ENSSTUG00000016052) cops9 (ENSSTUG00000016062) otos (ENSSTUG00000016077) ENSSTUG00000016084 ENSSTUG00000016103 ENSSTUG00000016112 ENSSTUG00000016124 ENSSTUG00000016133 ENSSTUG00000026294 eif2s3 (ENSSTUG00000026335) klhl15 (ENSSTUG00000026390) apoob (ENSSTUG00000026467) sat1b (ENSSTUG00000026547) ACOT9 (ENSSTUG00000026585) pdha1b (ENSSTUG00000026879) #22 RPS6KA3 (ENSSTUG00000026945) #28 EIF1AX (ENSSTUG00000027208) #27 ENSSTUG00000027276 #25 ENSSTUG00000027322 ENSSTUG00000027390 chrnd (ENSSTUG00000027414) ENSSTUG00000028359 ENSSTUG00000028368 ENSSTUG00000028392 vipr2 (ENSSTUG00000028447) ENSSTUG00000028456 ENSSTUG00000028471 msl2b (ENSSTUG00000028480) tnfsf10 (ENSSTUG00000028520) nceh1b.1 (ENSSTUG00000028533) Oncorhynchus ANCESTRAL SPECIES 28 ENSGT00940000160853.e ENSGT00940000159828.b.a ENSGT00500000045505.b.h ENSGT00390000000076.z.a ENSGT00390000011600.g ENSGT00990000210368 ENSGT00940000175687.b ENSGT00940000162716 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801.f ENSGT00940000159116.d ENSGT00530000063666.b.eb.d ENSGT00950000183121.b.b.b.b.w.f ENSGT00390000005330.h ENSGT00530000063174.a.k.d #22 ENSGT00940000159370.e.b #28 ENSGT00390000008256.wd.a.a #27 ENSGT00950000183163.b.m #25 ENSGT00940000166938.c ENSGT00940000155920.k.a ENSGT00940000159794 ENSGT00940000163670.b.a.gb.b.b ENSGT00940000159906.f.h ENSGT00940000157755.r.f ENSGT00950000182997.b.l.a ENSGT00940000158089.b.e ENSGT01090000260281.a ENSGT00990000206793.a.b.b ENSGT00390000016814.a.c ENSGT01070000253816.b.c.a Oncorhynchus_a ANCESTRAL SPECIES 23 ENSGT00940000160853.e ENSGT00940000159828.b.a ENSGT00500000045505.b.h ENSGT00390000000076.z.a ENSGT00390000011600.g ENSGT00990000210368 ENSGT00940000175687.b ENSGT00940000162716 ENSGT00940000156456 ENSGT00730000111293 ENSGT00550000074801.f ENSGT00940000159116.d ENSGT00530000063666.b.eb.d ENSGT00950000183121.b.b.b.b.w.f ENSGT00390000005330.h ENSGT00530000063174.a.k.d #22 ENSGT00940000159370.e.b #28 ENSGT00390000008256.vd.b.b #27 ENSGT00950000183163.b.m #25 ENSGT00940000166938.c ENSGT00940000155920.k.a ENSGT00940000159794 ENSGT00940000163670.b.a.gb.b.b ENSGT00940000159906.f.h ENSGT00940000157755.r.f ENSGT00950000182997.b.l.a ENSGT00940000158089.b.e ENSGT01090000260281.a ENSGT00990000206793.a.b.b ENSGT00390000016814.a.c ENSGT01070000253816.b.c.a Chinook salmon MODERN SPECIES 7 ENSOTSG00005016181 tfr1b (ENSOTSG00005016184) ENSOTSG00005016185 adipoqa (ENSOTSG00005016197) and1 (ENSOTSG00005016217) cops9 (ENSOTSG00005016218) otos (ENSOTSG00005016219) ENSOTSG00005016220 ENSOTSG00005016222 ENSOTSG00005016225 eif2s3 (ENSOTSG00005016226) klhl15 (ENSOTSG00005016232) apoob (ENSOTSG00005016238) sat1b (ENSOTSG00005016249) ACOT9 (ENSOTSG00005016271) pdha1b (ENSOTSG00005016793) #22 RPS6KA3 (ENSOTSG00005019066) #28 ENSOTSG00005019067 #27 ENSOTSG00005019068 #25 ENSOTSG00005019072 ENSOTSG00005019074 chrnd (ENSOTSG00005019075) ENSOTSG00005019077 GABRR3 (ENSOTSG00005019078) ENSOTSG00005019079 ENSOTSG00005019130 vipr2 (ENSOTSG00005024886) ENSOTSG00005024887 ENSOTSG00005024888 msl2b (ENSOTSG00005024890) tnfsf10 (ENSOTSG00005024891) Coho salmon MODERN SPECIES 9 tfr1b (ENSOKIG00005014790) ENSOKIG00005014768 adipoqa (ENSOKIG00005014752) and1 (ENSOKIG00005014746) cops9 (ENSOKIG00005014741) otos (ENSOKIG00005014736) ENSOKIG00005014713 ENSOKIG00005014705 ENSOKIG00005050559 ENSOKIG00005050554 eif2s3 (ENSOKIG00005050547) klhl15 (ENSOKIG00005050539) apoob (ENSOKIG00005050531) SAT1 (ENSOKIG00005050527) ACOT9 (ENSOKIG00005050519) pdha1b (ENSOKIG00005050506) #22 ENSOKIG00005050483 #28 ENSOKIG00005050464 #27 ENSOKIG00005050459 #25 ENSOKIG00005050376 ENSOKIG00005050350 chrnd (ENSOKIG00005050327) ENSOKIG00005050316 ENSOKIG00005050314 ENSOKIG00005050304 ENSOKIG00005050289 ENSOKIG00005050148 ENSOKIG00005050062 ENSOKIG00005050060 ENSOKIG00005050058 msl2b (ENSOKIG00005050054) Rainbow trout MODERN SPECIES 2 tfr1b (ENSOMYG00000040258) ENSOMYG00000062378 adipoqa (ENSOMYG00000065861) and1 (ENSOMYG00000040291) cops9 (ENSOMYG00000040301) otos (ENSOMYG00000064635) ENSOMYG00000040343 ENSOMYG00000040369 ENSOMYG00000040380 ENSOMYG00000040401 ENSOMYG00000040430 KLHL15 (ENSOMYG00000040457) apoob (ENSOMYG00000040468) SAT1 (ENSOMYG00000040494) ACOT9 (ENSOMYG00000040549) ENSOMYG00000040609 #22 RPS6KA3 (ENSOMYG00000069271) #28 ENSOMYG00000064201 ENSOMYG00000003253 #27 ENSOMYG00000065908 ENSOMYG00000003440 #25 ENSOMYG00000003551 ENSOMYG00000065848 ENSOMYG00000003625 ENSOMYG00000003147 ENSOMYG00000003772 ENSOMYG00000003822 ENSOMYG00000064129 ENSOMYG00000003921 ENSOMYG00000053682 ENSOMYG00000004003 Huchen MODERN SPECIES 2053 and1 (ENSHHUG00000002348) ENSHHUG00000002334 otos (ENSHHUG00000002312) ENSHHUG00000002213 ENSHHUG00000002205 ENSHHUG00000002192 ENSHHUG00000002175 ENSHHUG00000002156 ENSHHUG00000002147 eif2s3 (ENSHHUG00000002083) klhl15 (ENSHHUG00000002049) apoob (ENSHHUG00000001975) sat1b (ENSHHUG00000001955) ACOT9 (ENSHHUG00000001897) ENSHHUG00000001827 #37 pdha1b (ENSHHUG00000001518) #22 Northern pike MODERN SPECIES 20 tfr1b (ENSELUG00000013175) TNK2 (ENSELUG00000013145) ENSELUG00000013115 and1 (ENSELUG00000013102) cops9 (ENSELUG00000013075) otos (ENSELUG00000013059) apodb (ENSELUG00000013046) ENSELUG00000033979 ENSELUG00000012949 ENSELUG00000012983 eif2s3 (ENSELUG00000012926) klhl15 (ENSELUG00000012872) apoob (ENSELUG00000012820) sat1b (ENSELUG00000012698) acot9.2 (ENSELUG00000012671) pdha1b (ENSELUG00000012632) #22 RPS6KA3 (ENSELUG00000012539) #28 EIF1AX (ENSELUG00000012432) #27 ENSELUG00000012313 #25 ENSELUG00000012285 si:ch73-264p11.1 (ENSELUG00000026366) cip2a (ENSELUG00000012252) chrnd (ENSELUG00000012182) ENSELUG00000034588 ENSELUG00000028231 ENSELUG00000012065 GABRR3 (ENSELUG00000012038) ENSELUG00000028463 ENSELUG00000011899 vipr2 (ENSELUG00000011832) ENSELUG00000011815 Osteoglossocephalai ANCESTRAL SPECIES 99 ENSGT00940000154826 ENSGT00940000155717 ENSGT00390000011053 ENSGT00640000091497.a ENSGT01050000244950.a.a.a ENSGT00440000034309 ENSGT01050000244868 ENSGT00940000164731 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00950000185751 ENSGT00390000005330 ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.l #22 ENSGT00940000159370 #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00530000063174.a.k #22 Clupeocephala ANCESTRAL SPECIES 207 ENSGT00940000164731 ENSGT00550000074801 ENSGT00940000159116 ENSGT00530000063666.b.eb ENSGT00950000183121.b.b.b.b.w ENSGT00950000185751 ENSGT00390000005330 ENSGT00530000063174.a.k #22 ENSGT00390000014424 ENSGT00940000155647.bb ENSGT00950000182962.a.a.c ENSGT01090000261942 ENSGT00530000063666.b.db ENSGT00950000183121.b.b.b.b.x ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.l #22 ENSGT00940000159370 #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b Otomorpha ANCESTRAL SPECIES 107 ENSGT00390000017765.a ENSGT00940000156043 ENSGT00390000014424 ENSGT00940000155647.bb ENSGT00950000182962.a.a.c ENSGT00940000156558.a.b ENSGT00940000165845.c.b ENSGT00940000154826 ENSGT00940000155717 ENSGT00940000164731.k ENSGT00940000167353 ENSGT00530000063666.b.db ENSGT00950000183121.b.b.b.b.x.b ENSGT00950000183121.b.b.b.b.x.a ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.l #22 ENSGT00940000159370.c #28 ENSGT00940000159370.d #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00950000182941.b.b.b.a #26 ENSGT00940000177567 ENSGT00410000026585 ENSGT00390000010017 ENSGT00730000110966.a.b ENSGT01030000234590.B.a.a.e.a ENSGT00940000153916.A.a ENSGT00940000165992.a.b Clupeiformes ANCESTRAL SPECIES 143 ENSGT00940000155647.bb ENSGT00950000182962.a.a.c ENSGT00550000074787.c.b ENSGT00940000156558.a.b ENSGT01010000225766 ENSGT00940000165845.c.b ENSGT00940000154826 ENSGT00940000155717 ENSGT01050000244868.f ENSGT00940000164731.k ENSGT01090000261942 ENSGT00530000063666.b.db ENSGT00950000183121.b.b.b.b.x.b ENSGT00950000183121.b.b.b.b.x.a ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.l #22 ENSGT00940000159370.d.a.b #28 ENSGT00390000008256 #27 ENSGT00950000182941.b.b.b.b #26 ENSGT00950000183163.b #25 ENSGT00940000166938 ENSGT01030000234614.B.a.b ENSGT00950000182941.b.b.b.a #26 ENSGT00940000177567 ENSGT00410000026585 ENSGT00390000010017 ENSGT00730000110966.a.b.b ENSGT00930000151482 ENSGT00940000169096 ENSGT00550000074980 Denticle herring MODERN SPECIES 16 gtf3aa (ENSDCDG00000023792) ENSDCDG00000023796 atp6v1aa (ENSDCDG00000023799) zdhhc23a (ENSDCDG00000023818) ENSDCDG00000023820 ENSDCDG00000023821 ENSDCDG00000023822 ENSDCDG00000023823 cst14b.1 (ENSDCDG00000023824) ENSDCDG00000023825 ENSDCDG00000023827 apooa (ENSDCDG00000023829) sat1a.2 (ENSDCDG00000023833) sat1a.1 (ENSDCDG00000023836) prdx4 (ENSDCDG00000023839) #37 pdha1a (ENSDCDG00000023848) #22 ENSDCDG00000024155 #28 ENSDCDG00000031047 #27 map7d2a (ENSDCDG00000031055) #26 ENSDCDG00000031057 si:ch211-114c12.2 (ENSDCDG00000031061) mrps31 (ENSDCDG00000031065) slc25a15b (ENSDCDG00000031070) si:dkey-183i3.5 (ENSDCDG00000031073) ENSDCDG00000031076 ENSDCDG00000031106 zw10 (ENSDCDG00000031148) USP28 (ENSDCDG00000031265) HTR3B (ENSDCDG00000033021) HTR3A (ENSDCDG00000033024) aifm1 (ENSDCDG00000033068) Atlantic herring MODERN SPECIES 24 ENSCHAG00000007330 ENSCHAG00000007321 SLC34A1 (ENSCHAG00000007122) adra2db (ENSCHAG00000007110) ENSCHAG00000007099 cnot6a (ENSCHAG00000007040) ADAMTS2 (ENSCHAG00000006225) ENSCHAG00000006187 ENSCHAG00000006174 ENSCHAG00000006157 ENSCHAG00000006152 apooa (ENSCHAG00000006136) sat1a.2 (ENSCHAG00000006105) prdx4 (ENSCHAG00000005932) #37 ENSCHAG00000005907 pdha1a (ENSCHAG00000005694) #22 ENSCHAG00000004050 #28 ENSCHAG00000004006 ENSCHAG00000003952 mrps31 (ENSCHAG00000003907) slc25a15b (ENSCHAG00000003887) si:dkey-183i3.5 (ENSCHAG00000003822) Otophysi ANCESTRAL SPECIES 264 ENSGT00550000074787.c.b ENSGT00940000156558.a.b ENSGT00940000165845.c.b ENSGT00940000155717 ENSGT00940000164731.k ENSGT00940000167353 ENSGT00530000063666.b.db ENSGT00950000183121.b.b.b.b.x.b ENSGT00950000183121.b.b.b.b.x.a ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.l #22 ENSGT00940000159370.c #28 ENSGT00390000008256.rd.b #27 ENSGT00950000182941.b.b.b.a #26 ENSGT00410000026585 ENSGT00390000010017 ENSGT00730000110966.a.b ENSGT01030000234590.B.a.a.e.a ENSGT00940000153916.A.a ENSGT00940000165992.a.b ENSGT00940000153783.b.a.a.b ENSGT00940000156309.B.g Characiphysae ANCESTRAL SPECIES 128 ENSGT00940000165297.k.a ENSGT00390000005492.d ENSGT00550000074787.c.b ENSGT00940000156558.a.b ENSGT00940000165845.c.b ENSGT00940000155717 ENSGT00940000164731.k ENSGT00940000167353 ENSGT00510000048637 ENSGT00530000063666.b.db ENSGT00950000183121.b.b.b.b.x.b ENSGT00950000183121.b.b.b.b.x.a ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.l #22 ENSGT00940000177567 ENSGT00410000026585 ENSGT00390000010017 ENSGT00730000110966.a.b ENSGT01030000234590.B.a.a.e.a ENSGT00990000208422 ENSGT00940000165992.a.b ENSGT00940000153783.b.a.a.b ENSGT00940000156309.B.g ENSGT00940000165351 ENSGT00530000063882.b ENSGT01040000240503.B ENSGT00940000166995 ENSGT00390000004049.b ENSGT00950000183153.c.a.q Channel catfish MODERN SPECIES 20 naa38 (ENSIPUG00000021657) ENSIPUG00000021644 ENSIPUG00000021590 cldn15b (ENSIPUG00000021558) ENSIPUG00000021547 rangrf (ENSIPUG00000021519) slc25a35 (ENSIPUG00000021498) capga (ENSIPUG00000021457) tp53 (ENSIPUG00000021439) gps2 (ENSIPUG00000021426) Gabarap (ENSIPUG00000021410) ctdnep1a (ENSIPUG00000021393) senp3a (ENSIPUG00000021384) ENSIPUG00000021379 Prdx4 (ENSIPUG00000021353) #37 pdha1a (ENSIPUG00000021329) #22 ENSIPUG00000021265 #28 EIF1AX (ENSIPUG00000021259) #27 ENSIPUG00000021255 si:ch211-114c12.2 (ENSIPUG00000021246) MRPS31 (ENSIPUG00000021226) SLC25A15 (ENSIPUG00000021205) tm4sf21a (ENSIPUG00000021197) ENSIPUG00000021192 srrt (ENSIPUG00000021150) zdhhc23a (ENSIPUG00000021146) ENSIPUG00000021142 zfx (ENSIPUG00000021113) ENSIPUG00000021105 ENSIPUG00000021096 ApoO (ENSIPUG00000021059) Characiphysae_b ANCESTRAL SPECIES 165 ENSGT00940000165297.k.a ENSGT00390000005492.d ENSGT00550000074787.c.b ENSGT00940000156558.a.b ENSGT00940000165845.c.b ENSGT00940000155717 ENSGT00940000164731.k ENSGT00940000167353 ENSGT00510000048637 ENSGT00530000063666.b.db ENSGT00950000183121.b.b.b.b.x.b ENSGT00950000183121.b.b.b.b.x.a ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.l #22 ENSGT00940000177567 ENSGT00410000026585 ENSGT00390000010017 ENSGT00730000110966.a.b ENSGT01030000234590.B.a.a.e.a ENSGT00990000208422 ENSGT00940000165992.a.b ENSGT00940000153783.b.a.a.b ENSGT00940000156309.B.g ENSGT00940000157496 ENSGT00390000004049.a ENSGT00950000183153.c.a.q ENSGT00940000163587.a.b.b.e.a Characoidei ANCESTRAL SPECIES 365 ENSGT00940000164731.k ENSGT00940000167353 ENSGT00510000048637 ENSGT00530000063666.b.db ENSGT00950000183121.b.b.b.b.x.b ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.l #22 Mexicana tetra MODERN SPECIES 1211 ENSAMXG00000016286 ENSAMXG00000006887 CXorf58 (ENSAMXG00000031028) apooa (ENSAMXG00000006877) sat1a.2 (ENSAMXG00000038246) prdx4 (ENSAMXG00000037570) #37 pdha1a (ENSAMXG00000035787) #22 ENSAMXG00000029608 #28 ENSAMXG00000041269 #28 eif1axa (ENSAMXG00000031325) #27 ENSAMXG00000038528 Red-bellied piranha MODERN SPECIES 1016 ENSPNAG00000018328 cst14b.1 (ENSPNAG00000018311) zgc:153704 (ENSPNAG00000018300) ENSPNAG00000018278 ENSPNAG00000018257 apooa (ENSPNAG00000018196) sat1a.2 (ENSPNAG00000018180) prdx4 (ENSPNAG00000018126) #37 ENSPNAG00000017713 #22 ENSPNAG00000017652 #28 ENSPNAG00000017636 #28 sox19a (ENSPNAG00000017605) Electric eel MODERN SPECIES 29 ENSEEEG00000020331 srrt (ENSEEEG00000020326) atp6v1aa (ENSEEEG00000020323) zdhhc23a (ENSEEEG00000020322) ENSEEEG00000020321 CSTB (ENSEEEG00000020320) ENSEEEG00000020319 ENSEEEG00000020318 apooa (ENSEEEG00000020316) sat1a.2 (ENSEEEG00000020308) sat1a.1 (ENSEEEG00000020302) prdx4 (ENSEEEG00000020254) #37 pdha1a (ENSEEEG00000020228) #22 ENSEEEG00000017549 #28 ENSEEEG00000017382 #27 ENSEEEG00000017379 si:ch211-114c12.2 (ENSEEEG00000017377) mrps31 (ENSEEEG00000017376) slc25a15b (ENSEEEG00000017375) tm4sf21a (ENSEEEG00000017374) ENSEEEG00000017372 sox19a (ENSEEEG00000017371) eif4a1b (ENSEEEG00000016231) senp3a (ENSEEEG00000016211) plscr3a (ENSEEEG00000016210) phf23a (ENSEEEG00000016207) ctdnep1a (ENSEEEG00000016202) gabarapa (ENSEEEG00000016196) Cyprinoidei ANCESTRAL SPECIES 16 ENSGT00530000063174.a.l #22 ENSGT00940000159370.c #28 ENSGT00390000008256.rd.b #27 ENSGT00950000182941.b.b.b.a #26 ENSGT00940000156837 ENSGT00950000182858.A.b.b.g.b.s.a ENSGT00950000182858.A.b.b.g.b.s.b ENSGT00950000182858.A.b.b.g.b.t ENSGT00940000158347.y ENSGT00940000159451 ENSGT01050000244864.B.a.f ENSGT01030000234513.B.a.d ENSGT01030000235048 ENSGT00940000153669.a ENSGT00940000163054.h ENSGT00940000159074.f Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 31 ENSGT00940000165351.j.d.a ENSGT00940000156309.B.g.b ENSGT00940000153783.b.a.a.b.d ENSGT00940000165992.a.b.a ENSGT00940000153916.A.a.b ENSGT01030000234590.B.a.a.e.a.c ENSGT00730000110966.a.b.d.a ENSGT00390000010017.o ENSGT00410000026585.d ENSGT00940000159305.cb.a ENSGT00940000163587.a.b.b.e.a.a ENSGT00950000183153.c.a.q.a ENSGT00390000004049.b.a.a ENSGT00940000166995.h.a ENSGT01040000240503.B.i.a ENSGT00530000063174.a.l.a #22 ENSGT00940000159370.c.a #28 ENSGT00940000156837.n ENSGT00950000182858.A.b.b.g.b.s.b.c ENSGT00950000182858.A.b.b.g.b.t.a.a.a ENSGT00950000182858.A.b.b.g.b.t.a.b.a ENSGT00940000158347.y.a ENSGT00940000159451.g ENSGT01050000244864.B.a.f.c ENSGT01030000234513.B.a.d.c ENSGT00940000153669.a.t ENSGT00940000163054.h.a ENSGT00940000159074.f.d ENSGT00390000012084.d ENSGT00940000157427.i.a ENSGT00950000182972.a.a.a.a.a.f.h Cyprininae_a ANCESTRAL SPECIES ENSGT00940000165351.j.d.b ENSGT00940000156309.B.g.b ENSGT00940000153783.b.a.a.b.d ENSGT00940000165992.a.b.a ENSGT00940000153916.A.a.b ENSGT01030000234590.B.a.a.e.a.c ENSGT00730000110966.a.b.d.a ENSGT00390000010017.o ENSGT00410000026585.d ENSGT00940000159305.cb.a ENSGT00940000163587.a.b.b.e.a.a ENSGT00950000183153.c.a.q.a ENSGT00390000004049.b.a.a ENSGT00940000166995.h.a ENSGT01040000240503.B.i.a ENSGT00530000063174.a.l.a #22 ENSGT00940000159370.c.a #28 ENSGT00950000182941.b.b.b.a.b #26 ENSGT00940000156837.n ENSGT00950000182858.A.b.b.g.b.s.b.c ENSGT00950000182858.A.b.b.g.b.t.a.a.a ENSGT00950000182858.A.b.b.g.b.t.a.b.a ENSGT00940000158347.y.a ENSGT00940000159451.g ENSGT01050000244864.B.a.f.c ENSGT01030000234513.B.a.d.c ENSGT00940000153669.a.t ENSGT00940000163054.h.a ENSGT00940000159074.f.d ENSGT00390000012084.d ENSGT00940000157427.i.a Common carp reference MODERN SPECIES 7 atp6v1aa (ENSCCRG00000060472) phf23a (ENSCCRG00000081493) senp3a (ENSCCRG00000008757) eif4a1b (ENSCCRG00000008761) sox19a (ENSCCRG00000008769) tm4sf21a (ENSCCRG00000068539) slc25a15b (ENSCCRG00000008772) mrps31 (ENSCCRG00000001215) si:ch211-114c12.2 (ENSCCRG00000001213) capga (ENSCCRG00000001210) ENSCCRG00000074202 tp53 (ENSCCRG00000001205) gps2 (ENSCCRG00000076263) gabarapa (ENSCCRG00000018047) ctdnep1a (ENSCCRG00000031327) pdha1a (ENSCCRG00000055865) #22 rps6ka3a (ENSCCRG00000082011) #28 map7d2a (ENSCCRG00000010881) #26 ercc6l (ENSCCRG00000080390) ENSCCRG00000065055 ENSCCRG00000069365 tbc1d8b (ENSCCRG00000010618) gja2 (ENSCCRG00000064982) gjb1a (ENSCCRG00000054126) mtmr2 (ENSCCRG00000009032) kat5a (ENSCCRG00000008106) fam76b (ENSCCRG00000008306) cwc15 (ENSCCRG00000035615) acsl4b (ENSCCRG00000035626) stag2a (ENSCCRG00000040688) gria3a (ENSCCRG00000037188) Golden-line barbel MODERN SPECIES 151 phf23a (ENSSGRG00000040074) plscr3a (ENSSGRG00000040072) senp3a (ENSSGRG00000037764) sox19a (ENSSGRG00000037733) mpdu1a (ENSSGRG00000037703) tm4sf21a (ENSSGRG00000037696) ENSSGRG00000037695 mrps31 (ENSSGRG00000037694) si:ch211-114c12.2 (ENSSGRG00000037693) capga (ENSSGRG00000037692) ENSSGRG00000037691 tp53 (ENSSGRG00000037660) gps2 (ENSSGRG00000037649) gabarapa (ENSSGRG00000037617) ctdnep1a (ENSSGRG00000037519) pdha1a (ENSSGRG00000037501) #22 rps6ka3a (ENSSGRG00000032538) #28 ENSSGRG00000032390 #27 map7d2a (ENSSGRG00000032389) #26 ercc6l (ENSSGRG00000032386) GBGT1 (ENSSGRG00000032376) ENSSGRG00000032374 ENSSGRG00000032366 rnf128a (ENSSGRG00000032363) tbc1d8b (ENSSGRG00000032271) gja2 (ENSSGRG00000032269) gjb1a (ENSSGRG00000032267) mtmr2 (ENSSGRG00000032191) kat5a (ENSSGRG00000032189) fam76b (ENSSGRG00000032091) cwc15 (ENSSGRG00000032068) Goldfish MODERN SPECIES 3271 senp3a (ENSCARG00000068290) eif4a1b (ENSCARG00000068329) sox19a (ENSCARG00000068402) tm4sf21a (ENSCARG00000068415) slc25a15b (ENSCARG00000068423) mrps31 (ENSCARG00000068429) si:ch211-114c12.2 (ENSCARG00000068445) capga (ENSCARG00000068454) ENSCARG00000068479 tp53 (ENSCARG00000068521) gps2 (ENSCARG00000068609) ENSCARG00000068652 gabarapa (ENSCARG00000068660) ENSCARG00000068676 ctdnep1a (ENSCARG00000068690) pdha1a (ENSCARG00000068738) #22 rps6ka3a (ENSCARG00000068842) #28 ercc6l (ENSCARG00000068896) GBGT1 (ENSCARG00000068903) ENSCARG00000068912 ENSCARG00000068913 ENSCARG00000068917 rnf128a (ENSCARG00000068923) tbc1d8b (ENSCARG00000068950) gja2 (ENSCARG00000069064) gjb1a (ENSCARG00000069065) ENSCARG00000069067 mtmr2 (ENSCARG00000069127) kat5a (ENSCARG00000069312) fam76b (ENSCARG00000069440) cwc15 (ENSCARG00000069464) Cyprininae ANCESTRAL SPECIES 50 ENSGT00940000153783.b.a.a.b.c ENSGT00940000165992.a.b.b ENSGT00940000153916.A.a.a ENSGT01030000234590.B.a.a.e.a.d ENSGT00730000110966.a.b.d.b ENSGT00390000010017.p ENSGT00410000026585.c ENSGT00940000159305.cb.b ENSGT00940000163587.a.b.b.e.a.b ENSGT00950000183153.c.a.q.b ENSGT00390000004049.b.a.b ENSGT00940000166995.h.b ENSGT01040000240503.B.i.b ENSGT00530000063174.a.l.b #22 ENSGT00940000159370.c.b #28 ENSGT00390000008256.rd.b #27 ENSGT00950000182941.b.b.b.a #26 ENSGT00940000156837.m ENSGT00940000158869.p ENSGT00950000182858.A.b.b.g.b.s.a ENSGT00950000182858.A.b.b.g.b.s.b.d ENSGT00950000182858.A.b.b.g.b.t.a.a.b ENSGT00950000182858.A.b.b.g.b.t.a.b.b ENSGT00940000158347.y.b ENSGT00940000159451.h ENSGT01050000244864.B.a.f.d ENSGT01030000234513.B.a.d.d ENSGT01030000235048 ENSGT00940000153669.a.s Cyprininae_a ANCESTRAL SPECIES 42 ENSGT00940000165351.j.d.a ENSGT00940000156309.B.g.a ENSGT00940000153783.b.a.a.b.c ENSGT00940000165992.a.b.b ENSGT00940000153916.A.a.a ENSGT01030000234590.B.a.a.e.a.d ENSGT00730000110966.a.b.d.b ENSGT00390000010017.p ENSGT00410000026585.c ENSGT00940000159305.cb.b ENSGT00940000163587.a.b.b.e.a.b ENSGT00950000183153.c.a.q.b ENSGT00390000004049.b.a.b ENSGT00940000166995.h.b ENSGT01040000240503.B.i.b ENSGT00530000063174.a.l.b #22 ENSGT00940000159370.c.b #28 ENSGT00390000008256.rd.b #27 ENSGT00950000182941.b.b.b.a.a #26 ENSGT00940000156837.m ENSGT00940000158869.p ENSGT00950000182858.A.b.b.g.b.s.a ENSGT00950000182858.A.b.b.g.b.s.b.d ENSGT00950000182858.A.b.b.g.b.t.a.a.b ENSGT00950000182858.A.b.b.g.b.t.a.b.b ENSGT00940000158347.y.b ENSGT00940000159451.h ENSGT01050000244864.B.a.f.d ENSGT01030000234513.B.a.d.d ENSGT00940000153669.a.s ENSGT00940000163054.h.b Golden-line barbel MODERN SPECIES 274 phf23a (ENSSGRG00000030397) plscr3a (ENSSGRG00000030402) senp3a (ENSSGRG00000030408) sox19a (ENSSGRG00000030881) mpdu1a (ENSSGRG00000030885) tm4sf21a (ENSSGRG00000030894) slc25a15b (ENSSGRG00000030895) mrps31 (ENSSGRG00000030896) si:ch211-114c12.2 (ENSSGRG00000030897) capga (ENSSGRG00000030898) ENSSGRG00000030903 tp53 (ENSSGRG00000030904) gps2 (ENSSGRG00000030937) gabarapa (ENSSGRG00000030939) ctdnep1a (ENSSGRG00000031006) pdha1a (ENSSGRG00000031040) #22 rps6ka3a (ENSSGRG00000031850) #28 ENSSGRG00000036591 #27 map7d2a (ENSSGRG00000036802) #26 ercc6l (ENSSGRG00000036804) ENSSGRG00000036805 gbgt1l3 (ENSSGRG00000036806) ENSSGRG00000036808 Common carp reference MODERN SPECIES 15 atp6v1aa (ENSCCRG00000056788) phf23a (ENSCCRG00000001364) senp3a (ENSCCRG00000001271) eif4a1b (ENSCCRG00000063140) sox19a (ENSCCRG00000055009) mpdu1a (ENSCCRG00000001247) slc25a15b (ENSCCRG00000061865) tm4sf21a (ENSCCRG00000008770) mrps31 (ENSCCRG00000034729) si:ch211-114c12.2 (ENSCCRG00000001229) capga (ENSCCRG00000031314) tp53 (ENSCCRG00000031304) gps2 (ENSCCRG00000015767) gabarapa (ENSCCRG00000015760) ctdnep1a (ENSCCRG00000015754) pdha1a (ENSCCRG00000076428) #22 rps6ka3a (ENSCCRG00000065673) #28 ENSCCRG00000000112 #27 map7d2a (ENSCCRG00000082337) #26 ercc6l (ENSCCRG00000015774) ENSCCRG00000021146 gbgt1l8 (ENSCCRG00000072023) ENSCCRG00000010853 ENSCCRG00000010846 ENSCCRG00000055249 rnf128a (ENSCCRG00000010804) tbc1d8b (ENSCCRG00000010644) gja2 (ENSCCRG00000068861) gjb1a (ENSCCRG00000068166) kat5a (ENSCCRG00000008797) mtmr2 (ENSCCRG00000007955) Goldfish MODERN SPECIES 23 ENSCARG00000041454 ENSCARG00000041779 eif4a1b (ENSCARG00000041796) sox19a (ENSCARG00000041817) mpdu1a (ENSCARG00000041832) tm4sf21a (ENSCARG00000041862) slc25a15b (ENSCARG00000041946) mrps31 (ENSCARG00000041960) si:ch211-114c12.2 (ENSCARG00000041975) ENSCARG00000041999 capga (ENSCARG00000042009) tp53 (ENSCARG00000042080) ENSCARG00000042119 gps2 (ENSCARG00000042155) ctdnep1a (ENSCARG00000042305) pdha1a (ENSCARG00000042409) #22 rps6ka3a (ENSCARG00000044086) #28 ENSCARG00000044663 #27 ercc6l (ENSCARG00000044807) ENSCARG00000044816 ENSCARG00000044825 ENSCARG00000045057 ENSCARG00000045138 ENSCARG00000045167 rnf128a (ENSCARG00000045180) tbc1d8b (ENSCARG00000045196) gja2 (ENSCARG00000045292) gjb1a (ENSCARG00000045300) ENSCARG00000045310 mtmr2 (ENSCARG00000045352) kat5a (ENSCARG00000045718) Zebrafish MODERN SPECIES 20 plscr3a (ENSDARG00000093078) senp3a (ENSDARG00000095538) eif4a1b (ENSDARG00000003032) sox19a (ENSDARG00000010770) mpdu1a (ENSDARG00000035562) tm4sf21a (ENSDARG00000057706) slc25a15b (ENSDARG00000062271) mrps31 (ENSDARG00000057855) si:ch211-114c12.2 (ENSDARG00000028542) capga (ENSDARG00000035560) ENSDARG00000092931 tp53 (ENSDARG00000035559) gps2 (ENSDARG00000035558) gabarapa (ENSDARG00000035557) ctdnep1a (ENSDARG00000016519) pdha1a (ENSDARG00000012387) #22 rps6ka3a (ENSDARG00000035556) #28 eif1axa (ENSDARG00000029003) #27 ENSDARG00000112810 map7d2a (ENSDARG00000068480) #26 ercc6l (ENSDARG00000002479) ENSDARG00000062221 ENSDARG00000091969 gbgt1l3 (ENSDARG00000035555) GBGT1 (ENSDARG00000091936) ENSDARG00000093509 gbgt1l4 (ENSDARG00000068503) gbgt1l8 (ENSDARG00000091944) gbgt1l2 (ENSDARG00000092718) ENSDARG00000011283 gbgt1l1 (ENSDARG00000025275) Euteleosteomorpha ANCESTRAL SPECIES 174 ENSGT00550000074787.d.a.b ENSGT00940000156558.a.b ENSGT01050000244868.c.b ENSGT00940000164731 ENSGT00940000167353 ENSGT00390000014424 ENSGT00940000155647.bb ENSGT00950000182962.a.a.c ENSGT01090000261942 ENSGT00530000063666.b.db ENSGT00950000183121.b.b.b.b.x ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.l #22 ENSGT00950000182941.b.b.b.a #26 ENSGT00940000177567 ENSGT00410000026585 ENSGT00940000176119 ENSGT00940000156285 ENSGT00870000136493.c ENSGT00940000164655 ENSGT00940000159028 ENSGT00390000004986 ENSGT00940000155053.c.b ENSGT00940000160633.a.b ENSGT00940000156040.f ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT01100000263599 Acanthomorphata ANCESTRAL SPECIES 150 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00940000177567 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.f ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000158617 Euacanthomorphacea ANCESTRAL SPECIES 20 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00940000177567 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000178850 ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 5 hist2h2l (ENSMMDG00005016116) ENSMMDG00005016115 hyou1 (ENSMMDG00005010272) katnal2 (ENSMMDG00005010214) ENSMMDG00005010212 ENSMMDG00005010211 ENSMMDG00005010210 ENSMMDG00005010208 ENSMMDG00005010207 ENSMMDG00005010202 ENSMMDG00005010199 pcyt1bb (ENSMMDG00005010196) lipia (ENSMMDG00005010193) si:ch211-114c12.2 (ENSMMDG00005010190) ENSMMDG00005010189 pdha1a (ENSMMDG00005008199) #22 pdha1a (ENSMMDG00005008006) #22 prdx4 (ENSMMDG00005007963) #37 sat1a.2 (ENSMMDG00005007960) ENSMMDG00005007955 zgc:153704 (ENSMMDG00005007943) zdhhc23a (ENSMMDG00005007940) ATP6V1A (ENSMMDG00005007605) ENSMMDG00005007578 ENSMMDG00005007573 ENSMMDG00005007570 b4galt4 (ENSMMDG00005007567) CASR (ENSMMDG00005007564) zgc:175280 (ENSMMDG00005007489) kif20a (ENSMMDG00005007483) cdc23 (ENSMMDG00005007473) Pinecone sodierfish MODERN SPECIES 5 ENSMMDG00005016115 hyou1 (ENSMMDG00005010272) katnal2 (ENSMMDG00005010214) ENSMMDG00005010212 ENSMMDG00005010211 ENSMMDG00005010210 ENSMMDG00005010208 ENSMMDG00005010207 ENSMMDG00005010202 ENSMMDG00005010199 pcyt1bb (ENSMMDG00005010196) lipia (ENSMMDG00005010193) si:ch211-114c12.2 (ENSMMDG00005010190) ENSMMDG00005010189 pdha1a (ENSMMDG00005008199) #22 pdha1a (ENSMMDG00005008006) #22 prdx4 (ENSMMDG00005007963) #37 sat1a.2 (ENSMMDG00005007960) ENSMMDG00005007955 zgc:153704 (ENSMMDG00005007943) zdhhc23a (ENSMMDG00005007940) ATP6V1A (ENSMMDG00005007605) ENSMMDG00005007578 ENSMMDG00005007573 ENSMMDG00005007570 b4galt4 (ENSMMDG00005007567) CASR (ENSMMDG00005007564) zgc:175280 (ENSMMDG00005007489) kif20a (ENSMMDG00005007483) cdc23 (ENSMMDG00005007473) ENSMMDG00005007468 Percomorphaceae ANCESTRAL SPECIES 9 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00940000177567 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000178850 ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 Percomorphaceae_B ANCESTRAL SPECIES 10 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Percomorphaceae_C ANCESTRAL SPECIES 10 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Eupercaria ANCESTRAL SPECIES 17 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Eupecaria_A ANCESTRAL SPECIES 17 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Ballan wrasse MODERN SPECIES 56 ENSLBEG00000004460 sms (ENSLBEG00000004400) #33 ENSLBEG00000004370 gabrr3a (ENSLBEG00000004339) ENSLBEG00000004300 ENSLBEG00000004272 ENSLBEG00000004256 ENSLBEG00000004246 ENSLBEG00000004191 ENSLBEG00000004137 pcyt1bb (ENSLBEG00000004091) lipia (ENSLBEG00000004058) ENSLBEG00000004042 ENSLBEG00000004018 map7d2a (ENSLBEG00000003963) #26 pdha1a (ENSLBEG00000003915) #22 prdx4 (ENSLBEG00000003897) #37 sat1a.2 (ENSLBEG00000003879) ENSLBEG00000003858 zgc:153704 (ENSLBEG00000003768) ZDHHC23 (ENSLBEG00000003742) ATP6V1A (ENSLBEG00000003686) ENSLBEG00000003642 gsx1 (ENSLBEG00000003628) ENSLBEG00000003615 b4galt4 (ENSLBEG00000003593) CASR (ENSLBEG00000003570) zgc:175280 (ENSLBEG00000003521) kif20a (ENSLBEG00000003479) cdc23 (ENSLBEG00000003397) ENSLBEG00000003363 Eupecaria_B ANCESTRAL SPECIES 17 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Perciformes ANCESTRAL SPECIES 22 ENSGT00940000157181 ENSGT00390000016213 ENSGT00390000006852.A ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Cottioidei ANCESTRAL SPECIES 10 ENSGT00940000157181 ENSGT00390000016213 ENSGT00390000006852.A ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154622.a.b.m ENSGT00940000158617 Lumpfish MODERN SPECIES 5 nfrkb (ENSCLMG00005015781) ENSCLMG00005015767 sms (ENSCLMG00005015760) #33 ENSCLMG00005015745 gabrr3a (ENSCLMG00005015742) ENSCLMG00005015740 ENSCLMG00005015739 ENSCLMG00005015738 ENSCLMG00005015735 ENSCLMG00005015734 ENSCLMG00005015733 ENSCLMG00005015731 lipia (ENSCLMG00005015728) si:ch211-114c12.2 (ENSCLMG00005015727) ENSCLMG00005015723 #26 pdha1a (ENSCLMG00005014774) #22 prdx4 (ENSCLMG00005014737) #37 ENSCLMG00005014736 ENSCLMG00005014735 zgc:153704 (ENSCLMG00005014733) zdhhc23a (ENSCLMG00005014732) ATP6V1A (ENSCLMG00005014731) ENSCLMG00005014707 ENSCLMG00005014705 ENSCLMG00005014702 b4galt4 (ENSCLMG00005014701) CASR (ENSCLMG00005014698) zgc:175280 (ENSCLMG00005014696) kif20a (ENSCLMG00005014562) cdc23 (ENSCLMG00005014416) ENSCLMG00005014414 Stickleback MODERN SPECIES 7 nfrkb (ENSGACG00000020662) RYR1 (ENSGACG00000020663) ENSGACG00000020664 sms (ENSGACG00000020665) #33 ENSGACG00000020666 gabrr3a (ENSGACG00000020667) ENSGACG00000020668 ENSGACG00000020669 ENSGACG00000020670 ENSGACG00000020671 pcyt1bb (ENSGACG00000020672) lipia (ENSGACG00000020673) ENSGACG00000020674 ENSGACG00000020675 ENSGACG00000020676 #26 pdha1a (ENSGACG00000020677) #22 prdx4 (ENSGACG00000020678) #37 ENSGACG00000020679 zgc:153704 (ENSGACG00000020680) zdhhc23a (ENSGACG00000020681) ATP6V1A (ENSGACG00000020682) ENSGACG00000020683 ENSGACG00000020684 ENSGACG00000020685 b4galt4 (ENSGACG00000020686) CASR (ENSGACG00000020687) zgc:175280 (ENSGACG00000020688) kif20a (ENSGACG00000020689) cdc23 (ENSGACG00000020690) ENSGACG00000020691 ENSGACG00000020692 Perciformes_a ANCESTRAL SPECIES 20 ENSGT01100000263497.D ENSGT00940000157181 ENSGT00390000016213 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Channel bull blenny MODERN SPECIES 5 tmem45b (ENSCGOG00000003621) nfrkb (ENSCGOG00000003392) ENSCGOG00000003381 sms (ENSCGOG00000003324) #33 ENSCGOG00000003312 gabrr3a (ENSCGOG00000003311) ENSCGOG00000003309 ENSCGOG00000003306 ENSCGOG00000003304 ENSCGOG00000003293 ENSCGOG00000003268 pcyt1bb (ENSCGOG00000003215) lipia (ENSCGOG00000003125) si:ch211-114c12.2 (ENSCGOG00000003117) map7d2a (ENSCGOG00000003114) #26 pdha1a (ENSCGOG00000002172) #22 prdx4 (ENSCGOG00000001975) #37 sat1a.2 (ENSCGOG00000001948) ENSCGOG00000001943 zgc:153704 (ENSCGOG00000001941) ZDHHC23 (ENSCGOG00000001938) ATP6V1A (ENSCGOG00000001652) ENSCGOG00000001603 ENSCGOG00000023910 ENSCGOG00000023909 ENSCGOG00000023908 b4galt4 (ENSCGOG00000023906) CASR (ENSCGOG00000023900) zgc:175280 (ENSCGOG00000023892) kif20a (ENSCGOG00000023879) cdc23 (ENSCGOG00000023850) Pike perch MODERN SPECIES 37 tmem45b (ENSSLUG00000005791) nfrkb (ENSSLUG00000005759) ENSSLUG00000005699 sms (ENSSLUG00000005578) #33 ENSSLUG00000005531 gabrr3a (ENSSLUG00000005513) ENSSLUG00000023241 ENSSLUG00000023236 ENSSLUG00000023231 ENSSLUG00000023224 ENSSLUG00000023212 pcyt1bb (ENSSLUG00000023201) lipia (ENSSLUG00000023169) si:ch211-114c12.2 (ENSSLUG00000023161) ENSSLUG00000023154 #26 pdha1a (ENSSLUG00000022834) #22 prdx4 (ENSSLUG00000022735) #37 sat1a.2 (ENSSLUG00000022712) ENSSLUG00000022702 zgc:153704 (ENSSLUG00000022651) zdhhc23a (ENSSLUG00000022640) ATP6V1A (ENSSLUG00000022635) ENSSLUG00000022628 ENSSLUG00000022622 ENSSLUG00000022613 b4galt4 (ENSSLUG00000022606) CASR (ENSSLUG00000022588) zgc:175280 (ENSSLUG00000022542) kif20a (ENSSLUG00000022502) cdc23 (ENSSLUG00000022463) ENSSLUG00000022451 Eupecaria_C ANCESTRAL SPECIES 15 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000158617 Gilthead seabream MODERN SPECIES 4 ENSSAUG00010001986 sms (ENSSAUG00010001980) #33 ENSSAUG00010001976 gabrr3a (ENSSAUG00010001963) ENSSAUG00010001960 ENSSAUG00010001959 ENSSAUG00010001955 ENSSAUG00010001953 ENSSAUG00010001950 ENSSAUG00010001941 pcyt1bb (ENSSAUG00010001939) lipia (ENSSAUG00010001929) ENSSAUG00010001924 ENSSAUG00010001921 ENSSAUG00010001915 #26 pdha1a (ENSSAUG00010001900) #22 prdx4 (ENSSAUG00010001878) #37 sat1a.2 (ENSSAUG00010001871) ENSSAUG00010001861 zgc:153704 (ENSSAUG00010001857) ZDHHC23 (ENSSAUG00010001853) ATP6V1A (ENSSAUG00010001843) ENSSAUG00010001841 ENSSAUG00010001837 ENSSAUG00010001831 b4galt4 (ENSSAUG00010001823) CASR (ENSSAUG00010001814) zgc:175280 (ENSSAUG00010001799) kif20a (ENSSAUG00010001529) cdc23 (ENSSAUG00010026651) ENSSAUG00010026649 Eupercaria_incertae_sedis ANCESTRAL SPECIES 12 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000158617 ENSGT00940000157956.o.b Large yellow croaker MODERN SPECIES 493 tmem45b (ENSLCRG00005010928) nfrkb (ENSLCRG00005010930) ENSLCRG00005010935 sms (ENSLCRG00005011498) #33 ENSLCRG00005011500 gabrr3a (ENSLCRG00005011505) ENSLCRG00005011508 PHLDB2 (ENSLCRG00005011509) ENSLCRG00005011517 ENSLCRG00005011518 ENSLCRG00005011522 pcyt1bb (ENSLCRG00005011549) lipia (ENSLCRG00005011562) ENSLCRG00005011608 map7d2a (ENSLCRG00005011610) #26 pdha1a (ENSLCRG00005011617) #22 ska2 (ENSLCRG00005011626) tiprl (ENSLCRG00005011627) ENSLCRG00005011631 msx2b (ENSLCRG00005011633) ENSLCRG00005011634 drd1b (ENSLCRG00005011635) RAD50 (ENSLCRG00005011645) ENSLCRG00005011790 ENSLCRG00005011791 pou4f3 (ENSLCRG00005011794) RBM27 (ENSLCRG00005011797) PLAC8L1 (ENSLCRG00005012192) CYP8B1 (ENSLCRG00005012193) GRXCR2 (ENSLCRG00005012196) kctd16b (ENSLCRG00005012198) European seabass MODERN SPECIES 4 ENSDLAG00005006268 ENSDLAG00005006129 ENSDLAG00005006122 #33 ENSDLAG00005028315 ENSDLAG00005006061 ENSDLAG00005006047 ENSDLAG00005006024 ENSDLAG00005028403 ENSDLAG00005032532 ENSDLAG00005005986 ENSDLAG00005005824 ENSDLAG00005005794 ENSDLAG00005005720 ENSDLAG00005005685 ENSDLAG00005005670 #26 ENSDLAG00005005568 #22 prdx4 (ENSDLAG00005005259) #37 ENSDLAG00005005233 zgc:153704 (ENSDLAG00005028913) ENSDLAG00005005216 ENSDLAG00005005203 ENSDLAG00005005190 ENSDLAG00005005170 ENSDLAG00005005146 b4galt4 (ENSDLAG00005005129) ENSDLAG00005005018 zgc:175280 (ENSDLAG00005004934) KIF20A (ENSDLAG00005004911) ENSDLAG00005004746 ENSDLAG00005004720 ENSDLAG00005004684 Tetraodontidae ANCESTRAL SPECIES 6 ENSGT01100000263497.D ENSGT00940000157181 ENSGT00390000016213 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b ENSGT00940000154622.a.b.m ENSGT00940000158617 Fugu MODERN SPECIES 6 dnajc18 (ENSTRUG00000020734) tmem45b (ENSTRUG00000016999) nfrkb (ENSTRUG00000016994) sms (ENSTRUG00000016950) #33 ENSTRUG00000025738 gabrr3a (ENSTRUG00000016946) ENSTRUG00000032954 ENSTRUG00000016936 ENSTRUG00000030081 ENSTRUG00000016935 ENSTRUG00000016932 pcyt1bb (ENSTRUG00000016928) lipia (ENSTRUG00000016924) ENSTRUG00000025544 ENSTRUG00000024155 #26 pdha1a (ENSTRUG00000016917) #22 prdx4 (ENSTRUG00000016916) #37 ENSTRUG00000016914 ENSTRUG00000033057 zgc:153704 (ENSTRUG00000016909) ZDHHC23 (ENSTRUG00000016906) ATP6V1A (ENSTRUG00000016898) ENSTRUG00000016893 ENSTRUG00000016892 ENSTRUG00000032078 b4galt4 (ENSTRUG00000016879) CASR (ENSTRUG00000016870) zgc:175280 (ENSTRUG00000016862) kif20a (ENSTRUG00000016852) cdc23 (ENSTRUG00000016848) ENSTRUG00000016846 Tetraodon MODERN SPECIES 22 tmem45b (ENSTNIG00000010009) nfrkb (ENSTNIG00000010010) ENSTNIG00000010011 ENSTNIG00000000719 sms (ENSTNIG00000010012) #33 ENSTNIG00000010013 gabrr3a (ENSTNIG00000010014) ENSTNIG00000000833 ENSTNIG00000010015 ENSTNIG00000010016 ENSTNIG00000010017 pcyt1bb (ENSTNIG00000010018) lipia (ENSTNIG00000010019) ENSTNIG00000010020 ENSTNIG00000010021 #26 pdha1a (ENSTNIG00000010022) #22 prdx4 (ENSTNIG00000010023) #37 ENSTNIG00000010024 zgc:153704 (ENSTNIG00000010025) zdhhc23a (ENSTNIG00000010026) ATP6V1A (ENSTNIG00000010027) ENSTNIG00000010028 ENSTNIG00000000759 ENSTNIG00000010029 ENSTNIG00000010030 b4galt4 (ENSTNIG00000010031) CASR (ENSTNIG00000010032) zgc:175280 (ENSTNIG00000010033) kif20a (ENSTNIG00000010034) cdc23 (ENSTNIG00000010035) ENSTNIG00000010036 Percomorphaceae_D ANCESTRAL SPECIES 16 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Anabantaria ANCESTRAL SPECIES 13 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Anabantoidei ANCESTRAL SPECIES 12 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Climbing perch MODERN SPECIES 5 gng8 (ENSATEG00000019698) ENSATEG00000019685 nfrkb (ENSATEG00000019611) ENSATEG00000019555 ENSATEG00000019523 #33 ENSATEG00000019493 gabrr3a (ENSATEG00000019371) ENSATEG00000019343 ENSATEG00000019334 ENSATEG00000019308 ENSATEG00000019278 ENSATEG00000019259 ENSATEG00000019079 ENSATEG00000019015 ENSATEG00000018994 ENSATEG00000018976 #22 prdx4 (ENSATEG00000017856) #37 sat1a.2 (ENSATEG00000018967) ENSATEG00000017726 zgc:153704 (ENSATEG00000017711) ENSATEG00000017690 ENSATEG00000017610 ENSATEG00000017583 ENSATEG00000017572 ENSATEG00000028248 b4galt4 (ENSATEG00000017523) ENSATEG00000017377 zgc:175280 (ENSATEG00000017297) KIF20A (ENSATEG00000017266) ENSATEG00000017213 ENSATEG00000017157 Siamese fighting fish MODERN SPECIES 5 gng8 (ENSBSLG00000026643) tmem45b (ENSBSLG00000026642) nfrkb (ENSBSLG00000026641) ENSBSLG00000026638 sms (ENSBSLG00000026637) #33 ENSBSLG00000026636 gabrr3a (ENSBSLG00000026635) ENSBSLG00000026634 ENSBSLG00000026631 ENSBSLG00000026630 ENSBSLG00000026620 pcyt1bb (ENSBSLG00000026617) lipia (ENSBSLG00000026611) si:ch211-114c12.2 (ENSBSLG00000026603) map7d2a (ENSBSLG00000026586) #26 ENSBSLG00000026511 #22 prdx4 (ENSBSLG00000026407) #37 sat1a.2 (ENSBSLG00000026341) ENSBSLG00000026302 zgc:153704 (ENSBSLG00000026194) ZDHHC23 (ENSBSLG00000026161) atp6v1aa (ENSBSLG00000026089) ENSBSLG00000026037 gsx1 (ENSBSLG00000025990) ENSBSLG00000025937 ENSBSLG00000025936 b4galt4 (ENSBSLG00000025935) CASR (ENSBSLG00000025934) zgc:175280 (ENSBSLG00000025933) kif20a (ENSBSLG00000025932) cdc23 (ENSBSLG00000025929) Zig-zag eel MODERN SPECIES 5 ENSMAMG00000018131 nfrkb (ENSMAMG00000018113) ENSMAMG00000018038 #33 ENSMAMG00000018026 gabrr3a (ENSMAMG00000018005) ENSMAMG00000017989 ENSMAMG00000026403 ENSMAMG00000027839 ENSMAMG00000017953 ENSMAMG00000017881 ENSMAMG00000017868 ENSMAMG00000017828 ENSMAMG00000017816 ENSMAMG00000017809 ENSMAMG00000017796 #26 ENSMAMG00000017764 #22 prdx4 (ENSMAMG00000017739) #37 sat1a.2 (ENSMAMG00000017726) ENSMAMG00000017720 zgc:153704 (ENSMAMG00000017708) ENSMAMG00000017690 ENSMAMG00000017654 ENSMAMG00000017618 ENSMAMG00000017611 ENSMAMG00000026946 b4galt4 (ENSMAMG00000017595) ENSMAMG00000017580 zgc:175280 (ENSMAMG00000017561) KIF20A (ENSMAMG00000017548) ENSMAMG00000017506 ENSMAMG00000026984 Carangaria ANCESTRAL SPECIES 16 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Carangaria_A ANCESTRAL SPECIES 8 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Seriola ANCESTRAL SPECIES 2 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Greater amberjack MODERN SPECIES 139 RYR1 (ENSSDUG00000005595) ENSSDUG00000005839 sms (ENSSDUG00000005853) #33 ENSSDUG00000005896 gabrr3a (ENSSDUG00000005971) ENSSDUG00000006000 ENSSDUG00000006010 ENSSDUG00000006020 ENSSDUG00000006027 ENSSDUG00000006042 ENSSDUG00000006114 pcyt1bb (ENSSDUG00000006146) lipia (ENSSDUG00000006175) ENSSDUG00000006197 ENSSDUG00000006220 #26 pdha1a (ENSSDUG00000006245) #22 prdx4 (ENSSDUG00000006312) #37 sat1a.2 (ENSSDUG00000006376) ENSSDUG00000006831 zgc:153704 (ENSSDUG00000006853) zdhhc23a (ENSSDUG00000006861) ATP6V1A (ENSSDUG00000006881) ENSSDUG00000006920 ENSSDUG00000006944 ENSSDUG00000006959 b4galt4 (ENSSDUG00000006975) CASR (ENSSDUG00000006989) zgc:175280 (ENSSDUG00000007014) kif20a (ENSSDUG00000007080) cdc23 (ENSSDUG00000007107) ENSSDUG00000007156 Yellowtail amberjack MODERN SPECIES 3035 ENSSLDG00000018814 ENSSLDG00000018831 sms (ENSSLDG00000018844) #33 ENSSLDG00000018877 gabrr3a (ENSSLDG00000018944) ENSSLDG00000018972 ENSSLDG00000018986 ENSSLDG00000018995 ENSSLDG00000019003 ENSSLDG00000019018 ENSSLDG00000019065 pcyt1bb (ENSSLDG00000019097) lipia (ENSSLDG00000019132) si:ch211-114c12.2 (ENSSLDG00000019149) map7d2a (ENSSLDG00000019166) #26 pdha1a (ENSSLDG00000019215) #22 prdx4 (ENSSLDG00000019265) #37 sat1a.2 (ENSSLDG00000019305) ENSSLDG00000019535 zgc:153704 (ENSSLDG00000019547) zdhhc23a (ENSSLDG00000019570) ATP6V1A (ENSSLDG00000019592) ENSSLDG00000019626 gsx1 (ENSSLDG00000019661) ENSSLDG00000019672 b4galt4 (ENSSLDG00000019681) CASR (ENSSLDG00000019692) zgc:175280 (ENSSLDG00000019714) kif20a (ENSSLDG00000019720) cdc23 (ENSSLDG00000019752) ENSSLDG00000019788 Barramundi perch MODERN SPECIES 94 nfrkb (ENSLCAG00010008508) sms (ENSLCAG00010008016) #33 ENSLCAG00010007994 gabrr3a (ENSLCAG00010007980) ENSLCAG00010007967 ENSLCAG00010007965 ENSLCAG00010007960 ENSLCAG00010007955 ENSLCAG00010007946 ENSLCAG00010007774 pcyt1bb (ENSLCAG00010007727) lipia (ENSLCAG00010007724) ENSLCAG00010007722 si:ch211-114c12.2 (ENSLCAG00010007718) ENSLCAG00010007711 #26 pdha1a (ENSLCAG00010007561) #22 prdx4 (ENSLCAG00010007442) #37 sat1a.2 (ENSLCAG00010007387) ENSLCAG00010007376 zgc:153704 (ENSLCAG00010007370) ENSLCAG00010007368 zdhhc23a (ENSLCAG00010007363) ATP6V1A (ENSLCAG00010007340) ENSLCAG00010007307 gsx1 (ENSLCAG00010007297) ENSLCAG00010007293 ENSLCAG00010007289 b4galt4 (ENSLCAG00010007287) CASR (ENSLCAG00010007265) zgc:175280 (ENSLCAG00010006873) kif20a (ENSLCAG00010006765) Pleuronectoidei ANCESTRAL SPECIES 23 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Turbot MODERN SPECIES 16 ENSSMAG00000012089 ENSSMAG00000012095 #33 ENSSMAG00000012121 gabrr3a (ENSSMAG00000012145) ENSSMAG00000012168 ENSSMAG00000012186 ENSSMAG00000012194 ENSSMAG00000024630 ENSSMAG00000029591 ENSSMAG00000012208 ENSSMAG00000012238 ENSSMAG00000012292 ENSSMAG00000012308 ENSSMAG00000012336 ENSSMAG00000012353 #26 ENSSMAG00000012399 #22 prdx4 (ENSSMAG00000012439) #37 sat1a.2 (ENSSMAG00000028221) ENSSMAG00000012476 zgc:153704 (ENSSMAG00000012487) ENSSMAG00000012496 ENSSMAG00000012526 ENSSMAG00000012555 ENSSMAG00000012630 ENSSMAG00000012641 b4galt4 (ENSSMAG00000012659) ENSSMAG00000012665 zgc:175280 (ENSSMAG00000012677) KIF20A (ENSSMAG00000012711) ENSSMAG00000012742 ENSSMAG00000012828 Tongue sole MODERN SPECIES 10 ENSCSEG00000018755 ENSCSEG00000018767 tpst1l (ENSCSEG00000018769) asl (ENSCSEG00000018789) crcp (ENSCSEG00000018814) ca4c (ENSCSEG00000018817) aldh3a2b (ENSCSEG00000018826) ENSCSEG00000018838 vtnb (ENSCSEG00000018842) cryba1b (ENSCSEG00000018863) trarg1b (ENSCSEG00000018884) pcyt1bb (ENSCSEG00000018888) lipia (ENSCSEG00000018900) ENSCSEG00000018912 ENSCSEG00000018928 #26 pdha1a (ENSCSEG00000018951) #22 prdx4 (ENSCSEG00000018975) #37 sat1a.2 (ENSCSEG00000018995) ENSCSEG00000019105 zgc:153704 (ENSCSEG00000019108) ZDHHC23 (ENSCSEG00000019112) ATP6V1A (ENSCSEG00000019118) ENSCSEG00000019129 slc7a3a (ENSCSEG00000019132) snx12 (ENSCSEG00000019147) ENSCSEG00000019156 slc9a6b (ENSCSEG00000019164) exosc8 (ENSCSEG00000019201) SUPT20H (ENSCSEG00000019177) ugt5d1 (ENSCSEG00000019213) ugt5d1 (ENSCSEG00000019234) Ovalentaria ANCESTRAL SPECIES 11 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 Atherinomorphae ANCESTRAL SPECIES 14 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 Cyprinodontiformes ANCESTRAL SPECIES 11 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 Aplocheiloidei ANCESTRAL SPECIES 23 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000178850 ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Turquoise killifish MODERN SPECIES 1620 nfrkb (ENSNFUG00015022706) ENSNFUG00015023436 SMS (ENSNFUG00015023442) #33 ENSNFUG00015023467 ENSNFUG00015023472 Nfu_g_1_005297 (ENSNFUG00015023473) ENSNFUG00015023477 ENSNFUG00015023479 ENSNFUG00015023487 ENSNFUG00015023491 zdhhc20a (ENSNFUG00015023497) pcyt1bb (ENSNFUG00015023503) lipia (ENSNFUG00015023506) si:ch211-114c12.2 (ENSNFUG00015023507) ENSNFUG00015023510 #26 pdha1a (ENSNFUG00015023533) #22 prdx4 (ENSNFUG00015023747) #37 sat1a.2 (ENSNFUG00015023760) ZFX (ENSNFUG00015023762) ZDHHC23A (ENSNFUG00015023765) ATP6V1A (ENSNFUG00015023769) GSX1 (ENSNFUG00015023772) ENSNFUG00015004730 ENSNFUG00015004741 B4GALT4 (ENSNFUG00015004747) ENSNFUG00015004755 CASR (ENSNFUG00015004766) KIF20A (ENSNFUG00015004800) GFRA3 (ENSNFUG00015004922) SLC25A6 (ENSNFUG00015004935) zbtb20 (ENSNFUG00015004957) Mangrove rivulus MODERN SPECIES 42 nfrkb (ENSKMAG00000022166) RYR1 (ENSKMAG00000020504) sms (ENSKMAG00000018618) #33 ENSKMAG00000018561 gabrr3a (ENSKMAG00000018544) ENSKMAG00000018510 ENSKMAG00000018487 ENSKMAG00000018472 ENSKMAG00000018462 ENSKMAG00000018450 ENSKMAG00000018434 pcyt1bb (ENSKMAG00000018415) LIPH (ENSKMAG00000018389) si:ch211-114c12.2 (ENSKMAG00000018367) ENSKMAG00000018346 #26 pdha1a (ENSKMAG00000018296) #22 prdx4 (ENSKMAG00000018258) #37 sat1a.2 (ENSKMAG00000018237) ENSKMAG00000018225 zgc:153704 (ENSKMAG00000018188) zdhhc23a (ENSKMAG00000018164) ATP6V1A (ENSKMAG00000018112) ENSKMAG00000018069 gsx1 (ENSKMAG00000018048) ENSKMAG00000018038 ENSKMAG00000018015 CASR (ENSKMAG00000017975) zgc:175280 (ENSKMAG00000017918) kif20a (ENSKMAG00000017888) cdc23 (ENSKMAG00000017835) Cyprinodontoidei ANCESTRAL SPECIES 5 ENSGT00390000006852.A ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 Poeciliinae ANCESTRAL SPECIES 17 ENSGT00390000006852.A ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000175409 ENSGT00940000163250.A.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 Poecilia ANCESTRAL SPECIES 7 ENSGT00390000006852.A ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000175409 ENSGT00940000163250.A.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 NAME_6 ANCESTRAL SPECIES 1 ENSGT00390000006852.A ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000175409 ENSGT00940000163250.A.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Sailfin molly MODERN SPECIES 30 sms (ENSPLAG00000008055) #33 ENSPLAG00000007995 gabrr3a (ENSPLAG00000000721) ENSPLAG00000007961 ENSPLAG00000007927 ENSPLAG00000007910 ENSPLAG00000007892 ENSPLAG00000007885 ENSPLAG00000007874 ENSPLAG00000007862 ENSPLAG00000007823 pcyt1bb (ENSPLAG00000007765) lipia (ENSPLAG00000007740) ENSPLAG00000007675 ENSPLAG00000007664 #26 pdha1a (ENSPLAG00000007620) #22 prdx4 (ENSPLAG00000007614) #37 sat1a.2 (ENSPLAG00000007586) ENSPLAG00000007008 zgc:153704 (ENSPLAG00000006995) zdhhc23a (ENSPLAG00000006921) ATP6V1A (ENSPLAG00000006901) ENSPLAG00000006854 gsx1 (ENSPLAG00000006847) ENSPLAG00000006827 Amazon molly MODERN SPECIES 255 ENSPFOG00000019238 sms (ENSPFOG00000019239) #33 ENSPFOG00000019241 gabrr3a (ENSPFOG00000019245) ENSPFOG00000019250 ENSPFOG00000023073 ENSPFOG00000019251 ENSPFOG00000019254 ENSPFOG00000022976 ENSPFOG00000019263 ENSPFOG00000019267 pcyt1bb (ENSPFOG00000019271) lipia (ENSPFOG00000019276) ENSPFOG00000019280 ENSPFOG00000019281 #26 pdha1a (ENSPFOG00000019289) #22 prdx4 (ENSPFOG00000019300) #37 sat1a.2 (ENSPFOG00000019303) ENSPFOG00000019306 zgc:153704 (ENSPFOG00000024718) zdhhc23a (ENSPFOG00000019309) ATP6V1A (ENSPFOG00000019313) ENSPFOG00000019318 ENSPFOG00000019323 gsx1 (ENSPFOG00000019324) ENSPFOG00000019327 b4galt4 (ENSPFOG00000019331) CASR (ENSPFOG00000019334) zgc:175280 (ENSPFOG00000019339) kif20a (ENSPFOG00000019347) cdc23 (ENSPFOG00000019353) Guppy MODERN SPECIES 444 sms (ENSPREG00000019739) #33 ENSPREG00000019778 gabrr3a (ENSPREG00000019809) ENSPREG00000019824 ENSPREG00000019850 ENSPREG00000019854 ENSPREG00000019863 ENSPREG00000019869 lipia (ENSPREG00000019875) ENSPREG00000019892 ENSPREG00000019909 pcyt1bb (ENSPREG00000019924) ENSPREG00000019945 ENSPREG00000019959 ENSPREG00000019983 #26 pdha1a (ENSPREG00000020018) #22 prdx4 (ENSPREG00000020038) #37 sat1a.2 (ENSPREG00000020103) zgc:153704 (ENSPREG00000020444) zdhhc23a (ENSPREG00000020475) ATP6V1A (ENSPREG00000020483) ENSPREG00000020511 ENSPREG00000020526 gsx1 (ENSPREG00000020538) ENSPREG00000020545 ENSPREG00000020550 b4galt4 (ENSPREG00000020565) CASR (ENSPREG00000020592) aifm1 (ENSPREG00000020714) ENSPREG00000020769 amer1 (ENSPREG00000020786) Platyfish MODERN SPECIES 2 ENSXMAG00000023946 sms (ENSXMAG00000011323) #33 ENSXMAG00000011343 gabrr3a (ENSXMAG00000023172) ENSXMAG00000013100 ENSXMAG00000013098 ENSXMAG00000025514 ENSXMAG00000021897 ENSXMAG00000013090 ENSXMAG00000013076 ENSXMAG00000013074 pcyt1bb (ENSXMAG00000013065) lipia (ENSXMAG00000013055) ENSXMAG00000013053 map7d2a (ENSXMAG00000013047) #26 pdha1a (ENSXMAG00000013025) #22 prdx4 (ENSXMAG00000013013) #37 sat1a.2 (ENSXMAG00000012998) ENSXMAG00000012994 zdhhc23a (ENSXMAG00000012989) ATP6V1A (ENSXMAG00000012982) ENSXMAG00000011611 ENSXMAG00000012980 ENSXMAG00000012978 b4galt4 (ENSXMAG00000012973) CASR (ENSXMAG00000012971) zgc:175280 (ENSXMAG00000012958) kif20a (ENSXMAG00000012940) cdc23 (ENSXMAG00000028922) ENSXMAG00000012915 slc25a5 (ENSXMAG00000020938) NAME_4 ANCESTRAL SPECIES 5 ENSGT00390000016213 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00940000176119 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731.h ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Mummichog MODERN SPECIES 693 ENSFHEG00000015546 sms (ENSFHEG00000015522) #33 ENSFHEG00000015498 gabrr3a (ENSFHEG00000015478) ENSFHEG00000015450 ENSFHEG00000015429 ENSFHEG00000015417 ENSFHEG00000015402 ENSFHEG00000015397 ENSFHEG00000015387 pcyt1bb (ENSFHEG00000015373) lipia (ENSFHEG00000015352) ENSFHEG00000015307 ENSFHEG00000015299 ENSFHEG00000015293 #26 pdha1a (ENSFHEG00000015263) #22 prdx4 (ENSFHEG00000015259) #37 sat1a.2 (ENSFHEG00000015215) ENSFHEG00000015210 zdhhc23a (ENSFHEG00000015191) ATP6V1A (ENSFHEG00000015170) ENSFHEG00000015150 ENSFHEG00000015125 gsx1 (ENSFHEG00000015114) ENSFHEG00000015102 ENSFHEG00000015094 CASR (ENSFHEG00000015075) zgc:175280 (ENSFHEG00000014818) kif20a (ENSFHEG00000014776) cdc23 (ENSFHEG00000014759) ENSFHEG00000014699 Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 1846 pdha1a (ENSCVAG00000018203) #22 prdx4 (ENSCVAG00000018211) #37 sat1a.2 (ENSCVAG00000018221) ENSCVAG00000018233 zgc:153704 (ENSCVAG00000018243) ZDHHC23 (ENSCVAG00000018264) ATP6V1A (ENSCVAG00000018353) Sheepshead minnow MODERN SPECIES 304 ENSCVAG00000006064 ENSCVAG00000006054 mmp14b (ENSCVAG00000006040) ENSCVAG00000006032 ENSCVAG00000006027 ENSCVAG00000006019 cbln12 (ENSCVAG00000006016) ENSCVAG00000006010 ENSCVAG00000005992 ENSCVAG00000005985 ENSCVAG00000005980 casq1a (ENSCVAG00000005973) selenoj (ENSCVAG00000005955) ENSCVAG00000005889 ENSCVAG00000005881 #26 ENSCVAG00000005870 #22 Oryzias ANCESTRAL SPECIES 14 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Oryzias_b ANCESTRAL SPECIES 13 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000165282.b Indian medaka MODERN SPECIES 4 RYR1 (ENSOMEG00000020650) ENSOMEG00000000550 sms (ENSOMEG00000020761) #33 ENSOMEG00000020789 #20 gabrr3a (ENSOMEG00000020839) ENSOMEG00000020856 ENSOMEG00000020905 ENSOMEG00000020919 ENSOMEG00000020928 ENSOMEG00000020942 ENSOMEG00000021080 pcyt1bb (ENSOMEG00000000691) lipia (ENSOMEG00000021167) ENSOMEG00000021199 ENSOMEG00000021301 #26 pdha1a (ENSOMEG00000021345) #22 prdx4 (ENSOMEG00000021752) #37 ENSOMEG00000021970 zgc:153704 (ENSOMEG00000021944) zdhhc23a (ENSOMEG00000021989) ATP6V1A (ENSOMEG00000022067) ENSOMEG00000022117 ENSOMEG00000022150 gsx1 (ENSOMEG00000022169) ENSOMEG00000022186 ENSOMEG00000022228 b4galt4 (ENSOMEG00000022251) CASR (ENSOMEG00000022274) zgc:175280 (ENSOMEG00000000588) kif20a (ENSOMEG00000022448) cdc23 (ENSOMEG00000022499) Javanese ricefish MODERN SPECIES 5 dnajc18 (ENSOJAG00000018735) BRD8 (ENSOJAG00000018611) tmem45b (ENSOJAG00000018587) nfrkb (ENSOJAG00000018509) ENSOJAG00000017532 sms (ENSOJAG00000017522) #33 ENSOJAG00000017473 gabrr3a (ENSOJAG00000017423) ENSOJAG00000017402 ENSOJAG00000017373 ENSOJAG00000016882 pcyt1bb (ENSOJAG00000016763) lipia (ENSOJAG00000016709) ENSOJAG00000016685 ENSOJAG00000016672 pdha1a (ENSOJAG00000016153) #22 prdx4 (ENSOJAG00000016032) #37 ENSOJAG00000016000 zgc:153704 (ENSOJAG00000015991) zdhhc23a (ENSOJAG00000015983) ATP6V1A (ENSOJAG00000015849) ENSOJAG00000015829 ENSOJAG00000015794 gsx1 (ENSOJAG00000015778) ENSOJAG00000015560 b4galt4 (ENSOJAG00000015548) CASR (ENSOJAG00000015518) zgc:175280 (ENSOJAG00000015419) kif20a (ENSOJAG00000014973) cdc23 (ENSOJAG00000014709) ENSOJAG00000014688 Oryzias_a ANCESTRAL SPECIES 2 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT01100000263608 ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Chinese medaka MODERN SPECIES 717 nfrkb (ENSOSIG00000013852) ENSOSIG00000011501 sms (ENSOSIG00000011500) #33 ENSOSIG00000011499 gabrr3a (ENSOSIG00000011263) ENSOSIG00000011254 ENSOSIG00000011251 ENSOSIG00000011243 ENSOSIG00000011238 ENSOSIG00000011236 ENSOSIG00000011220 pcyt1bb (ENSOSIG00000011215) lipia (ENSOSIG00000011209) si:ch211-114c12.2 (ENSOSIG00000011207) ENSOSIG00000011205 #26 pdha1a (ENSOSIG00000010900) #22 prdx4 (ENSOSIG00000010890) #37 ENSOSIG00000010889 zgc:153704 (ENSOSIG00000010888) zdhhc23a (ENSOSIG00000010887) ATP6V1A (ENSOSIG00000010886) ENSOSIG00000010853 gsx1 (ENSOSIG00000010852) ENSOSIG00000010851 b4galt4 (ENSOSIG00000010850) CASR (ENSOSIG00000010849) zgc:175280 (ENSOSIG00000010818) kif20a (ENSOSIG00000010768) cdc23 (ENSOSIG00000010313) ENSOSIG00000010304 slc25a5 (ENSOSIG00000010301) Japanese Medaka HdrR MODERN SPECIES 5 ENSORLG00000026245 ENSORLG00000027409 sms (ENSORLG00000006393) #33 ENSORLG00000029344 gabrr3a (ENSORLG00000006406) ENSORLG00000006412 ENSORLG00000023874 ENSORLG00000030104 ENSORLG00000025777 ENSORLG00000006465 ENSORLG00000006478 pcyt1bb (ENSORLG00000006497) lipia (ENSORLG00000006515) si:ch211-114c12.2 (ENSORLG00000006523) ENSORLG00000006548 #26 pdha1a (ENSORLG00000006582) #22 prdx4 (ENSORLG00000006589) #37 ENSORLG00000006601 zgc:153704 (ENSORLG00000006624) zdhhc23a (ENSORLG00000006632) ENSORLG00000006642 ENSORLG00000006655 ENSORLG00000028095 gsx1 (ENSORLG00000006664) ENSORLG00000006672 ENSORLG00000022920 b4galt4 (ENSORLG00000006677) CASR (ENSORLG00000006682) zgc:175280 (ENSORLG00000006716) kif20a (ENSORLG00000006748) cdc23 (ENSORLG00000006778) Ovalentaria_B ANCESTRAL SPECIES 16 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 Pomacentridae ANCESTRAL SPECIES 10 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Pomacentridae_A ANCESTRAL SPECIES 3 ENSGT01100000263497.D ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Amphiprion ANCESTRAL SPECIES 3 ENSGT00530000064262.pc.a ENSGT01100000263497.D ENSGT00940000157181 ENSGT00390000016213 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d ENSGT00940000156931 ENSGT00950000182950.A Orange clownfish MODERN SPECIES 6 tmem45b (ENSAPEG00000024308) nfrkb (ENSAPEG00000024317) RYR1 (ENSAPEG00000024341) sms (ENSAPEG00000024395) #33 ENSAPEG00000024399 gabrr3a (ENSAPEG00000024405) ENSAPEG00000024411 ENSAPEG00000024414 ENSAPEG00000024422 ENSAPEG00000024429 ENSAPEG00000024437 pcyt1bb (ENSAPEG00000024445) lipia (ENSAPEG00000024452) ENSAPEG00000024464 map7d2a (ENSAPEG00000024471) #26 pdha1a (ENSAPEG00000024477) #22 prdx4 (ENSAPEG00000024495) #37 sat1a.2 (ENSAPEG00000024500) ENSAPEG00000024509 zgc:153704 (ENSAPEG00000024513) ZDHHC23 (ENSAPEG00000024521) ATP6V1A (ENSAPEG00000024526) ENSAPEG00000024532 gsx1 (ENSAPEG00000024536) ENSAPEG00000024539 ENSAPEG00000024542 b4galt4 (ENSAPEG00000000316) CASR (ENSAPEG00000000343) zgc:175280 (ENSAPEG00000000390) kif20a (ENSAPEG00000000528) cdc23 (ENSAPEG00000000605) Clown anemonefish MODERN SPECIES 1379 ENSAOCG00000023917 ENSAOCG00000023886 pcyt1bb (ENSAOCG00000023869) lipia (ENSAOCG00000023856) ENSAOCG00000023841 map7d2a (ENSAOCG00000023830) #26 pdha1a (ENSAOCG00000023806) #22 prdx4 (ENSAOCG00000023779) #37 sat1a.2 (ENSAOCG00000023762) ENSAOCG00000001732 zgc:153704 (ENSAOCG00000023715) Spiny chromis MODERN SPECIES 87 RYR1 (ENSAPOG00000008048) ENSAPOG00000007683 sms (ENSAPOG00000007654) #33 ENSAPOG00000007573 gabrr3a (ENSAPOG00000007548) ENSAPOG00000007497 ENSAPOG00000007487 ENSAPOG00000007473 ENSAPOG00000007460 ENSAPOG00000007431 ENSAPOG00000007337 pcyt1bb (ENSAPOG00000007268) lipia (ENSAPOG00000007208) ENSAPOG00000007195 map7d2a (ENSAPOG00000007171) #26 pdha1a (ENSAPOG00000007131) #22 prdx4 (ENSAPOG00000007077) #37 sat1a.2 (ENSAPOG00000007028) ENSAPOG00000006989 zgc:153704 (ENSAPOG00000006968) ZDHHC23 (ENSAPOG00000006939) ATP6V1A (ENSAPOG00000006922) ENSAPOG00000006857 gsx1 (ENSAPOG00000006823) ARHGAP31 (ENSAPOG00000006810) ENSAPOG00000006796 b4galt4 (ENSAPOG00000006778) CASR (ENSAPOG00000006738) zgc:175280 (ENSAPOG00000006459) kif20a (ENSAPOG00000006379) cdc23 (ENSAPOG00000006290) Bicolor damselfish MODERN SPECIES 303 ENSSPAG00000003188 pcyt1bb (ENSSPAG00000003157) lipia (ENSSPAG00000003124) si:ch211-114c12.2 (ENSSPAG00000003103) pdha1a (ENSSPAG00000003053) #22 prdx4 (ENSSPAG00000003032) #37 sat1a.2 (ENSSPAG00000003021) ENSSPAG00000002994 ENSSPAG00000002967 ZDHHC23 (ENSSPAG00000002941) ATP6V1A (ENSSPAG00000002871) ENSSPAG00000002775 gsx1 (ENSSPAG00000002754) ENSSPAG00000002737 b4galt4 (ENSSPAG00000002731) CASR (ENSSPAG00000002702) zgc:175280 (ENSSPAG00000002654) kif20a (ENSSPAG00000002610) cdc23 (ENSSPAG00000002552) ENSSPAG00000002519 Cichlidae ANCESTRAL SPECIES 4 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b.b ENSGT01050000244868.c.b.a ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae ANCESTRAL SPECIES 14 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00940000177567 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l.g #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b.b.a ENSGT01050000244868.c.b.a ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d Pseudocrenilabrinae_A ANCESTRAL SPECIES 21 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l.g #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b.b.a ENSGT01050000244868.c.b.a ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d Haplochromini ANCESTRAL SPECIES 8 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l.g #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b.b.a ENSGT01050000244868.c.b.a.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d Burton s mouthbrooder MODERN SPECIES 316 ENSHBUG00000021201 ENSHBUG00000021206 ENSHBUG00000021239 ENSHBUG00000021258 pcyt1bb (ENSHBUG00000021299) lipia (ENSHBUG00000021316) ENSHBUG00000021328 si:ch211-114c12.2 (ENSHBUG00000021339) map7d2a (ENSHBUG00000021357) #26 pdha1a (ENSHBUG00000021401) #22 prdx4 (ENSHBUG00000000661) #37 sat1a.2 (ENSHBUG00000021459) ENSHBUG00000021473 zgc:153704 (ENSHBUG00000021480) zgc:153704 (ENSHBUG00000021535) ATP6V1A (ENSHBUG00000000666) ENSHBUG00000021571 ENSHBUG00000021585 gsx1 (ENSHBUG00000021594) ENSHBUG00000021606 ENSHBUG00000021621 b4galt4 (ENSHBUG00000021627) CASR (ENSHBUG00000021647) zgc:175280 (ENSHBUG00000021656) kif20a (ENSHBUG00000021672) Haplochromini_A ANCESTRAL SPECIES 6 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l.g #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b.b.a ENSGT01050000244868.c.b.a.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d P. nyererei MODERN SPECIES 359 ENSPNYG00000014104 ENSPNYG00000014123 sms (ENSPNYG00000014145) #33 ENSPNYG00000014195 gabrr3a (ENSPNYG00000014222) ENSPNYG00000014242 ENSPNYG00000014252 ENSPNYG00000014265 ENSPNYG00000014281 ENSPNYG00000014293 ENSPNYG00000014324 pcyt1bb (ENSPNYG00000014353) lipia (ENSPNYG00000014394) si:ch211-114c12.2 (ENSPNYG00000014431) ENSPNYG00000014450 pdha1a (ENSPNYG00000014473) #22 prdx4 (ENSPNYG00000014516) #37 sat1a.2 (ENSPNYG00000014534) ENSPNYG00000014545 zgc:153704 (ENSPNYG00000014561) zgc:153704 (ENSPNYG00000014578) zdhhc23a (ENSPNYG00000014639) ATP6V1A (ENSPNYG00000014738) ENSPNYG00000014817 gsx1 (ENSPNYG00000014873) ENSPNYG00000014892 ENSPNYG00000014906 b4galt4 (ENSPNYG00000014923) CASR (ENSPNYG00000014966) zgc:175280 (ENSPNYG00000015150) ENSPNYG00000015194 Haplochromini_B ANCESTRAL SPECIES 26 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000177447 ENSGT00870000136506 #33 ENSGT00940000164851.a ENSGT00940000159906.e ENSGT00940000163670.b.b ENSGT00940000156371.c.b ENSGT01100000263599 ENSGT00940000163831.f ENSGT00940000153716.A.l ENSGT00940000156040.f ENSGT00940000156285 ENSGT00410000026585 ENSGT00950000182941.b.b.b.a #26 ENSGT00530000063174.a.l.g #22 ENSGT00940000153430.a.a #37 ENSGT00950000183121.b.b.b.b.x ENSGT00940000164731 ENSGT01050000244868.c.b.b.a ENSGT01050000244868.c.b.a.b ENSGT00940000156558.a.b ENSGT00550000074787.d.a.b ENSGT00950000182962.a.a.c ENSGT00940000167349 ENSGT00940000154361.A ENSGT00940000159458.e.a ENSGT00940000159458.e.b ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000164978.b.d Zebra mbuna MODERN SPECIES 1092 ENSMZEG00005018520 sms (ENSMZEG00005018510) #33 ENSMZEG00005018497 ENSMZEG00005018493 gabrr3a (ENSMZEG00005018491) ENSMZEG00005018486 ENSMZEG00005018482 ENSMZEG00005018475 ENSMZEG00005018471 ENSMZEG00005018469 ENSMZEG00005018460 pcyt1bb (ENSMZEG00005018447) lipia (ENSMZEG00005018433) si:ch211-114c12.2 (ENSMZEG00005018427) map7d2a (ENSMZEG00005018420) #26 pdha1a (ENSMZEG00005018412) #22 prdx4 (ENSMZEG00005018405) #37 sat1a.2 (ENSMZEG00005018402) ENSMZEG00005018392 zgc:153704 (ENSMZEG00005018387) zgc:153704 (ENSMZEG00005018384) ZDHHC23 (ENSMZEG00005018383) ENSMZEG00005018377 ZDHHC23 (ENSMZEG00005018373) ATP6V1A (ENSMZEG00005018360) ENSMZEG00005018353 gsx1 (ENSMZEG00005018350) ENSMZEG00005018346 b4galt4 (ENSMZEG00005018344) CASR (ENSMZEG00005017168) zgc:175280 (ENSMZEG00005017124) Eastern happy MODERN SPECIES 1 ENSACLG00000019160 ENSACLG00000019149 sms (ENSACLG00000019104) #33 ENSACLG00000019054 gabrr3a (ENSACLG00000018998) ENSACLG00000018951 ENSACLG00000018932 ENSACLG00000018921 ENSACLG00000018920 ENSACLG00000018886 ENSACLG00000018808 pcyt1bb (ENSACLG00000018767) lipia (ENSACLG00000018742) si:ch211-114c12.2 (ENSACLG00000018719) map7d2a (ENSACLG00000018680) #26 pdha1a (ENSACLG00000018627) #22 prdx4 (ENSACLG00000018585) #37 sat1a.2 (ENSACLG00000018570) ENSACLG00000018550 ENSACLG00000018527 zgc:153704 (ENSACLG00000018513) zgc:153704 (ENSACLG00000018503) zdhhc23a (ENSACLG00000018489) ATP6V1A (ENSACLG00000018400) ENSACLG00000018366 ENSACLG00000018332 gsx1 (ENSACLG00000018323) ENSACLG00000018286 ENSACLG00000018269 b4galt4 (ENSACLG00000018259) CASR (ENSACLG00000018246) Lyretail cichlid MODERN SPECIES 358 ENSNBRG00000005309 ENSNBRG00000005294 sms (ENSNBRG00000005254) #33 ENSNBRG00000005229 gabrr3a (ENSNBRG00000005209) ENSNBRG00000005184 ENSNBRG00000005169 ENSNBRG00000005156 ENSNBRG00000005133 ENSNBRG00000005121 ENSNBRG00000005081 pcyt1bb (ENSNBRG00000005071) lipia (ENSNBRG00000005059) si:ch211-114c12.2 (ENSNBRG00000005048) ENSNBRG00000005017 #26 pdha1a (ENSNBRG00000004969) #22 Nile tilapia MODERN SPECIES 1 nfrkb (ENSONIG00000005012) ENSONIG00000030517 sms (ENSONIG00000005102) #33 ENSONIG00000005105 gabrr3a (ENSONIG00000005108) ENSONIG00000005109 ENSONIG00000005110 ENSONIG00000036817 ENSONIG00000005113 ENSONIG00000005117 pcyt1bb (ENSONIG00000005126) lipia (ENSONIG00000005129) si:ch211-114c12.2 (ENSONIG00000005136) ENSONIG00000027365 ENSONIG00000005138 #26 pdha1a (ENSONIG00000005140) #22 prdx4 (ENSONIG00000005145) #37 sat1a.2 (ENSONIG00000035625) ENSONIG00000043207 ENSONIG00000029108 zgc:153704 (ENSONIG00000041602) zgc:153704 (ENSONIG00000005151) zdhhc23a (ENSONIG00000005152) ATP6V1A (ENSONIG00000005153) ENSONIG00000005158 ENSONIG00000005160 gsx1 (ENSONIG00000005163) ENSONIG00000005164 b4galt4 (ENSONIG00000005167) CASR (ENSONIG00000005168) zgc:175280 (ENSONIG00000005172) Pseudocrenilabrinae ANCESTRAL SPECIES 75 ENSGT00940000165704.b.a.a.b ENSGT00530000063174.a.l.h #22 ENSGT00940000165704.a.a ENSGT00940000164025.a.b.a ENSGT00940000164025.a.b.b ENSGT00940000154762.a.b.a.a.a.b Nile tilapia DUPLICATION Nile tilapia MODERN SPECIES 1 cldn30 (ENSONIG00000028092) CLDN4 (ENSONIG00000021100) ENSONIG00000041008 pdha1a (ENSONIG00000008761) #22 ENSONIG00000041413 ENSONIG00000035527 ENSONIG00000030521 ENSONIG00000028894 ENSONIG00000040031 ENSONIG00000042206 ENSONIG00000031461 ENSONIG00000021101 ENSONIG00000031392 ENSONIG00000027657 ENSONIG00000036059 pdha1a (ENSONIG00000008757) #22 cldnd (ENSONIG00000021099) cldn29 (ENSONIG00000035870) ENSONIG00000021097 cldn3d (ENSONIG00000008756) cldn3c (ENSONIG00000031570) abhd11 (ENSONIG00000008755) sumf2 (ENSONIG00000028659) cct6a (ENSONIG00000008750) ENSONIG00000008747 mrps17 (ENSONIG00000008746) LIMK1 (ENSONIG00000008736) septin4a (ENSONIG00000008732) mntb (ENSONIG00000008731) pafah1b1b (ENSONIG00000008138) CLUH (ENSONIG00000008724) Nile tilapia MODERN SPECIES 1 nsrp1 (ENSONIG00000005565) ENSONIG00000005524 ENSONIG00000041020 ENSONIG00000033488 ENSONIG00000028639 ENSONIG00000005520 ENSONIG00000005519 supt6h (ENSONIG00000005512) sdf2 (ENSONIG00000036746) ENSONIG00000039680 nf2b (ENSONIG00000005502) mettl27 (ENSONIG00000005501) cldn30 (ENSONIG00000028092) CLDN4 (ENSONIG00000021100) ENSONIG00000041008 pdha1a (ENSONIG00000008761) #22 ENSONIG00000041413 ENSONIG00000035527 ENSONIG00000030521 ENSONIG00000028894 ENSONIG00000040031 ENSONIG00000042206 ENSONIG00000031461 ENSONIG00000021101 ENSONIG00000031392 ENSONIG00000027657 ENSONIG00000036059 pdha1a (ENSONIG00000008757) #22 cldnd (ENSONIG00000021099) cldn29 (ENSONIG00000035870) ENSONIG00000021097 Pseudocrenilabrinae_A ANCESTRAL SPECIES 22 ENSGT00950000182902.b.b.a ENSGT00390000011517.a.a.c.a.a ENSGT00940000159328 ENSGT00940000157430.a.a ENSGT00940000154049.a ENSGT00940000160421.j.j ENSGT00940000166536 ENSGT00510000047446 ENSGT00940000158885 ENSGT00940000159212.b ENSGT01020000230354.B.b.a.a ENSGT00530000063975.j ENSGT00940000164025.b.b ENSGT00940000165704.b.b ENSGT00940000165704.b.a.a.b ENSGT00530000063174.a.l.h #22 ENSGT00940000165704.a.a ENSGT00940000164025.a.b.a ENSGT00940000164025.a.b.b ENSGT00940000154762.a.b.a.a.a.b ENSGT00940000163648.a.a.a.a ENSGT00940000166320 ENSGT00390000015880 ENSGT00940000162897 ENSGT00940000156339 ENSGT00950000183018.a.d.b ENSGT00530000064130 ENSGT00940000156345.k.b ENSGT00940000157152.B ENSGT00510000048287.a ENSGT00940000155039.a.b Haplochromini ANCESTRAL SPECIES 8 ENSGT00390000011517.a.a.c.a.a ENSGT00940000159328 ENSGT00940000157430.a.a ENSGT00940000154049.a ENSGT00940000178013 ENSGT00940000160421.j.j ENSGT00940000166536 ENSGT00510000047446 ENSGT00940000158885 ENSGT00940000159212.b ENSGT01020000230354.B.b.a.a ENSGT00530000063975.j ENSGT00940000164025.b.b ENSGT00940000165704.b.b ENSGT00940000165704.b.a.a.b ENSGT00530000063174.a.l.h #22 ENSGT00940000164025.a.b.a ENSGT00940000164025.a.b.b ENSGT00940000154762.a.b.a.a.a.b ENSGT00940000163648.a.a.a.a ENSGT00940000166320 ENSGT00390000015880 ENSGT00940000162897 ENSGT00940000156339 ENSGT00950000183018.a.d.b ENSGT00530000064130 ENSGT00940000182251 ENSGT00940000156345.k.b ENSGT00940000157152.B ENSGT00510000048287.a ENSGT00940000155039.a.b Haplochromini_A ANCESTRAL SPECIES 6 ENSGT00940000159328 ENSGT00940000157430.a.a ENSGT00940000154049.a ENSGT00940000178013 ENSGT00940000160421.j.j ENSGT00940000166536 ENSGT00510000047446 ENSGT00940000158885 ENSGT00940000159212.b ENSGT01020000230354.B.b.a.a ENSGT00530000063975.j ENSGT00940000164025.b.b ENSGT00940000165704.b.b ENSGT00940000164025.a.a.a.a ENSGT00940000165704.b.a.a.b ENSGT00530000063174.a.l.h #22 ENSGT00940000164025.a.b.a ENSGT00940000164025.a.b.b ENSGT00940000154762.a.b.a.a.a.b ENSGT00940000163648.a.a.a.a ENSGT00940000166320 ENSGT00390000015880 ENSGT00940000162897 ENSGT00940000156339 ENSGT00950000183018.a.d.b ENSGT00530000064130 ENSGT00940000182251 ENSGT00940000156345.k.b ENSGT00940000157152.B ENSGT00510000048287.a ENSGT00940000155039.a.b Haplochromini_B ANCESTRAL SPECIES 16 ENSGT00390000011517.a.a.c.a.a ENSGT00940000159328 ENSGT00940000157430.a.a ENSGT00940000154049.a ENSGT00940000178013 ENSGT00940000160421.j.j ENSGT00940000166536 ENSGT00510000047446 ENSGT00940000158885 ENSGT00940000159212.b ENSGT01020000230354.B.b.a.a ENSGT00530000063975.j ENSGT00940000164025.b.b ENSGT00940000164025.a.a.a.a ENSGT00940000165704.b.a.a.b ENSGT00530000063174.a.l.h #22 ENSGT00940000164025.a.b.a ENSGT00940000164025.a.b.b ENSGT00940000154762.a.b.a.a.a.b ENSGT00940000163648.a.a.a.a ENSGT00940000166320 ENSGT00390000015880 ENSGT00940000162897 ENSGT00940000156339 ENSGT00950000183018.a.d.b ENSGT00530000064130 ENSGT00940000156345.k.b ENSGT00940000157152.B ENSGT00510000048287.a ENSGT00940000155039.a.b ENSGT00390000012485.a.b.b Zebra mbuna MODERN SPECIES 1092 nsrp1 (ENSMZEG00005024743) ENSMZEG00005024744 ENSMZEG00005024768 ENSMZEG00005024773 supt6h (ENSMZEG00005024774) sdf2 (ENSMZEG00005024775) ENSMZEG00005024776 nf2b (ENSMZEG00005024777) mettl27 (ENSMZEG00005024778) cldn30 (ENSMZEG00005024779) CLDN4 (ENSMZEG00005024780) ENSMZEG00005024781 ENSMZEG00005024782 ENSMZEG00005024783 ENSMZEG00005024784 ENSMZEG00005024785 #22 cldnd (ENSMZEG00005024786) cldn29 (ENSMZEG00005024787) cldnb (ENSMZEG00005024801) cldn3d (ENSMZEG00005024849) cldn3c (ENSMZEG00005024851) abhd11 (ENSMZEG00005024865) sumf2 (ENSMZEG00005024867) cct6a (ENSMZEG00005024869) ENSMZEG00005024874 mrps17 (ENSMZEG00005024876) LIMK1 (ENSMZEG00005024878) septin4a (ENSMZEG00005024888) mntb (ENSMZEG00005025173) pafah1b1b (ENSMZEG00005025175) CLUH (ENSMZEG00005025181) Eastern happy MODERN SPECIES 1 ENSACLG00000005733 supt6h (ENSACLG00000005753) sdf2 (ENSACLG00000005842) CALN1 (ENSACLG00000005848) nf2b (ENSACLG00000005869) mettl27 (ENSACLG00000005960) cldn30 (ENSACLG00000005979) CLDN4 (ENSACLG00000005987) ENSACLG00000006054 ENSACLG00000006063 ENSACLG00000006074 ENSACLG00000006086 ENSACLG00000006397 ENSACLG00000006401 ENSACLG00000006403 ENSACLG00000006408 #22 cldnd (ENSACLG00000006448) ENSACLG00000006571 cldn29 (ENSACLG00000006738) cldnb (ENSACLG00000006764) cldn3d (ENSACLG00000006795) cldn3c (ENSACLG00000006823) abhd11 (ENSACLG00000006843) sumf2 (ENSACLG00000006854) cct6a (ENSACLG00000006865) ENSACLG00000006939 mrps17 (ENSACLG00000007174) ENSACLG00000007190 LIMK1 (ENSACLG00000007198) septin4a (ENSACLG00000007242) mntb (ENSACLG00000007275) P. nyererei MODERN SPECIES 321 ENSPNYG00000019000 ENSPNYG00000018990 ENSPNYG00000018979 pdha1a (ENSPNYG00000018954) #22 cldnd (ENSPNYG00000018943) ENSPNYG00000018937 CLDN4 (ENSPNYG00000018919) cldn3d (ENSPNYG00000018872) cldn3c (ENSPNYG00000018855) abhd11 (ENSPNYG00000018833) sumf2 (ENSPNYG00000018820) cct6a (ENSPNYG00000018731) NIPSNAP2 (ENSPNYG00000018700) mrps17 (ENSPNYG00000018693) ENSPNYG00000018680 LIMK1 (ENSPNYG00000018623) septin4a (ENSPNYG00000018040) mntb (ENSPNYG00000017928) pafah1b1b (ENSPNYG00000017901) Burton s mouthbrooder MODERN SPECIES 347 ENSHBUG00000006477 ENSHBUG00000001039 ENSHBUG00000006450 #22 ENSHBUG00000006431 ENSHBUG00000006422 cldn29 (ENSHBUG00000006372) cldnb (ENSHBUG00000006353) cldn3d (ENSHBUG00000006314) cldn3c (ENSHBUG00000006266) abhd11 (ENSHBUG00000006255) sumf2 (ENSHBUG00000006248) cct6a (ENSHBUG00000006235) NIPSNAP2 (ENSHBUG00000006168) mrps17 (ENSHBUG00000006127) ENSHBUG00000006121 LIMK1 (ENSHBUG00000006097) septin4a (ENSHBUG00000005988) mntb (ENSHBUG00000005405) Lyretail cichlid MODERN SPECIES 297 ENSNBRG00000000959 ENSNBRG00000000995 supt6h (ENSNBRG00000001035) sdf2 (ENSNBRG00000001135) ENSNBRG00000001162 nf2b (ENSNBRG00000001190) mettl27 (ENSNBRG00000001252) cldn30 (ENSNBRG00000001263) CLDN4 (ENSNBRG00000001277) ENSNBRG00000001361 ENSNBRG00000001385 ENSNBRG00000001389 ENSNBRG00000001407 ENSNBRG00000001431 pdha1a (ENSNBRG00000001449) #22 ENSNBRG00000001496 cldnd (ENSNBRG00000001514) cldn29 (ENSNBRG00000001529) cldnb (ENSNBRG00000001609) cldn3d (ENSNBRG00000001750) cldn3c (ENSNBRG00000001807) abhd11 (ENSNBRG00000001879) sumf2 (ENSNBRG00000001930) cct6a (ENSNBRG00000002182) NIPSNAP2 (ENSNBRG00000002230) mrps17 (ENSNBRG00000002238) LIMK1 (ENSNBRG00000002260) septin4a (ENSNBRG00000002328) mntb (ENSNBRG00000002363) pafah1b1b (ENSNBRG00000002400) Midas cichlid MODERN SPECIES 888 RYR1 (ENSACIG00000002680) ENSACIG00000002660 sms (ENSACIG00000002629) #33 ENSACIG00000002611 gabrr3a (ENSACIG00000002584) ENSACIG00000002560 ENSACIG00000002555 ENSACIG00000002536 ENSACIG00000002523 ENSACIG00000002495 ENSACIG00000002469 pcyt1bb (ENSACIG00000002420) lipia (ENSACIG00000002397) si:ch211-114c12.2 (ENSACIG00000002374) ENSACIG00000002366 pdha1a (ENSACIG00000002343) #22 prdx4 (ENSACIG00000002324) #37 sat1a.2 (ENSACIG00000002087) ENSACIG00000002038 zgc:153704 (ENSACIG00000001818) zgc:153704 (ENSACIG00000001585) zgc:153704 (ENSACIG00000001404) zgc:153704 (ENSACIG00000001381) ZDHHC23 (ENSACIG00000001340) ATP6V1A (ENSACIG00000001309) ENSACIG00000001283 ENSACIG00000001273 gsx1 (ENSACIG00000001245) ENSACIG00000001232 b4galt4 (ENSACIG00000001214) CASR (ENSACIG00000001191) Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 214 tmem45b (ENSHCOG00000019990) nfrkb (ENSHCOG00000020060) ENSHCOG00000020276 ENSHCOG00000020291 sms (ENSHCOG00000020312) #33 ENSHCOG00000020322 gabrr3a (ENSHCOG00000020336) ENSHCOG00000000544 ENSHCOG00000020350 ENSHCOG00000020360 ENSHCOG00000020380 ENSHCOG00000020405 pcyt1bb (ENSHCOG00000020434) lipia (ENSHCOG00000020444) si:ch211-114c12.2 (ENSHCOG00000020456) pdha1a (ENSHCOG00000020485) #22 ENSHCOG00000020742 #22 ENSHCOG00000020773 #22 ENSHCOG00000020784 #22 prdx4 (ENSHCOG00000020811) #37 sat1a.2 (ENSHCOG00000020844) ENSHCOG00000020900 zgc:153704 (ENSHCOG00000020922) zdhhc23a (ENSHCOG00000020942) ATP6V1A (ENSHCOG00000020971) ENSHCOG00000020973 gsx1 (ENSHCOG00000021013) ENSHCOG00000021019 ENSHCOG00000001294 b4galt4 (ENSHCOG00000001297) CASR (ENSHCOG00000001304) Tiger tail seahorse DUPLICATION Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 214 ENSHCOG00000020276 ENSHCOG00000020291 sms (ENSHCOG00000020312) #33 ENSHCOG00000020322 gabrr3a (ENSHCOG00000020336) ENSHCOG00000000544 ENSHCOG00000020350 ENSHCOG00000020360 ENSHCOG00000020380 ENSHCOG00000020405 pcyt1bb (ENSHCOG00000020434) lipia (ENSHCOG00000020444) si:ch211-114c12.2 (ENSHCOG00000020456) pdha1a (ENSHCOG00000020485) #22 ENSHCOG00000020742 #22 ENSHCOG00000020773 #22 ENSHCOG00000020784 #22 prdx4 (ENSHCOG00000020811) #37 sat1a.2 (ENSHCOG00000020844) ENSHCOG00000020900 zgc:153704 (ENSHCOG00000020922) zdhhc23a (ENSHCOG00000020942) ATP6V1A (ENSHCOG00000020971) ENSHCOG00000020973 gsx1 (ENSHCOG00000021013) ENSHCOG00000021019 ENSHCOG00000001294 b4galt4 (ENSHCOG00000001297) CASR (ENSHCOG00000001304) CASR (ENSHCOG00000001307) zgc:175280 (ENSHCOG00000001352) Tiger tail seahorse MODERN SPECIES 214 ENSHCOG00000020291 sms (ENSHCOG00000020312) #33 ENSHCOG00000020322 gabrr3a (ENSHCOG00000020336) ENSHCOG00000000544 ENSHCOG00000020350 ENSHCOG00000020360 ENSHCOG00000020380 ENSHCOG00000020405 pcyt1bb (ENSHCOG00000020434) lipia (ENSHCOG00000020444) si:ch211-114c12.2 (ENSHCOG00000020456) pdha1a (ENSHCOG00000020485) #22 ENSHCOG00000020742 #22 ENSHCOG00000020773 #22 ENSHCOG00000020784 #22 prdx4 (ENSHCOG00000020811) #37 sat1a.2 (ENSHCOG00000020844) ENSHCOG00000020900 zgc:153704 (ENSHCOG00000020922) zdhhc23a (ENSHCOG00000020942) ATP6V1A (ENSHCOG00000020971) ENSHCOG00000020973 gsx1 (ENSHCOG00000021013) ENSHCOG00000021019 ENSHCOG00000001294 b4galt4 (ENSHCOG00000001297) CASR (ENSHCOG00000001304) CASR (ENSHCOG00000001307) zgc:175280 (ENSHCOG00000001352) cdc23 (ENSHCOG00000001380) Tiger tail seahorse MODERN SPECIES 214 nfrkb (ENSHCOG00000020060) ENSHCOG00000020276 ENSHCOG00000020291 sms (ENSHCOG00000020312) #33 ENSHCOG00000020322 gabrr3a (ENSHCOG00000020336) ENSHCOG00000000544 ENSHCOG00000020350 ENSHCOG00000020360 ENSHCOG00000020380 ENSHCOG00000020405 pcyt1bb (ENSHCOG00000020434) lipia (ENSHCOG00000020444) si:ch211-114c12.2 (ENSHCOG00000020456) pdha1a (ENSHCOG00000020485) #22 ENSHCOG00000020742 #22 ENSHCOG00000020773 #22 ENSHCOG00000020784 #22 prdx4 (ENSHCOG00000020811) #37 sat1a.2 (ENSHCOG00000020844) ENSHCOG00000020900 zgc:153704 (ENSHCOG00000020922) zdhhc23a (ENSHCOG00000020942) ATP6V1A (ENSHCOG00000020971) ENSHCOG00000020973 gsx1 (ENSHCOG00000021013) ENSHCOG00000021019 ENSHCOG00000001294 b4galt4 (ENSHCOG00000001297) CASR (ENSHCOG00000001304) CASR (ENSHCOG00000001307) Cod MODERN SPECIES 20 zgc:163098 (ENSGMOG00000000935) ENSGMOG00000000893 ENSGMOG00000000912 ENSGMOG00000002123 #33 ENSGMOG00000002145 gabrr3a (ENSGMOG00000014262) ENSGMOG00000026928 ENSGMOG00000024330 ENSGMOG00000024025 ENSGMOG00000029199 ENSGMOG00000002240 ENSGMOG00000002261 ENSGMOG00000002276 ENSGMOG00000002297 ENSGMOG00000030680 ENSGMOG00000002378 #22 prdx4 (ENSGMOG00000002394) #37 sat1a.2 (ENSGMOG00000025474) ENSGMOG00000023676 zgc:153704 (ENSGMOG00000002433) ENSGMOG00000002452 ENSGMOG00000002483 ENSGMOG00000002508 ENSGMOG00000023452 ENSGMOG00000033627 b4galt4 (ENSGMOG00000002654) ENSGMOG00000002672 zgc:175280 (ENSGMOG00000002684) KIF20A (ENSGMOG00000002724) ENSGMOG00000002777 ENSGMOG00000002813 Protacanthopterygii ANCESTRAL SPECIES 83 ENSGT00940000159458 ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000160838 ENSGT00940000164978.b.d ENSGT00940000153322.B.d.b ENSGT00940000159385.e.b ENSGT01030000234788 ENSGT00390000014424 ENSGT00940000155647.bb ENSGT00950000182962.a.a.c ENSGT01090000261942 ENSGT00530000063666.b.db ENSGT00950000183121.b.b.b.b.x ENSGT00940000153430.a.a #37 ENSGT00530000063174.a.l #22 ENSGT00940000159370.f #28 ENSGT00390000008256.vd.a #27 ENSGT00950000182941.b.b.b.a #26 ENSGT00410000026585 ENSGT00940000176119 ENSGT00940000156285 ENSGT00870000136493.c ENSGT00940000164655 ENSGT00940000159028 ENSGT00390000004986 ENSGT00940000155053.c.b ENSGT00940000160633.a.b ENSGT00940000156040.f ENSGT00940000163831.f ENSGT00940000153716.A.l Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 107 ENSGT01030000234788 ENSGT00390000017765.a.c ENSGT00940000156043.fb.a ENSGT00390000014424.i ENSGT00950000182962.a.a.c.a ENSGT00940000157443.d.a.a ENSGT00550000074787.d.a.b.a ENSGT00940000156558.a.b.a ENSGT00940000165845.c.b ENSGT00940000155717 ENSGT00940000164731.i ENSGT00940000167353 ENSGT00530000063666.b.db.g ENSGT00950000183121.b.b.b.b.x.c ENSGT00940000153430.a.a.j.a #37 ENSGT00530000063174.a.l.k #22 ENSGT00940000159370.f.a #28 ENSGT00390000008256.vd.a.b #27 ENSGT00950000182941.b.b.b.a.d.a #26 ENSGT00410000026585.b ENSGT00940000176119 ENSGT00940000156285.`c ENSGT00870000136493.c ENSGT00940000164655 ENSGT00940000159028.j ENSGT00390000004986.f ENSGT00940000155053.c.b.a ENSGT00940000160633.a.b.c ENSGT00940000156040.f.a ENSGT00940000163831.f.a ENSGT00940000153716.A.l.b Salmoninae_a ANCESTRAL SPECIES 4 ENSGT00950000182962.a.a.c.a ENSGT00940000157443.d.a.a ENSGT00550000074787.d.a.b.a ENSGT00940000156558.a.b.a ENSGT00940000165845.c.b ENSGT00940000154826 ENSGT00940000164430.a.b.a.f ENSGT01010000223723 ENSGT01050000244868.c.b.d ENSGT00940000164731.i ENSGT00940000167353 ENSGT00510000048637 ENSGT00530000063666.b.db.g ENSGT00950000183121.b.b.b.b.x.c ENSGT00940000153430.a.a.j.a #37 ENSGT00530000063174.a.l.k #22 ENSGT00940000159370.f.a #28 ENSGT00390000008256.vd.a.b #27 ENSGT00950000182941.b.b.b.a.d.a #26 ENSGT00410000026585.b ENSGT00940000176119 ENSGT00940000156285.`c ENSGT00870000136493.c ENSGT00940000164655 ENSGT00940000159028.j ENSGT00390000004986.f ENSGT00940000155053.c.b.a ENSGT00940000160633.a.b.c ENSGT00940000156040.f.a ENSGT00940000163831.f.a ENSGT00940000153716.A.l.b Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00390000014424.i ENSGT00950000182962.a.a.c.a ENSGT00940000157443.d.a.a ENSGT00550000074787.d.a.b.a ENSGT00940000156558.a.b.a ENSGT00940000165845.c.b ENSGT00940000155717 ENSGT01010000223723.b ENSGT01050000244868.c.b.d ENSGT00940000164731.i ENSGT00940000167353 ENSGT00510000048637 ENSGT00530000063666.b.db.g ENSGT00950000183121.b.b.b.b.x.c ENSGT00940000153430.a.a.j.a #37 ENSGT00530000063174.a.l.k #22 ENSGT00940000159370.f.a #28 ENSGT00390000008256.vd.a.b #27 ENSGT00950000182941.b.b.b.a.d.a #26 ENSGT00410000026585.b ENSGT00940000176119 ENSGT00940000156285.`c ENSGT00870000136493.c ENSGT00940000164655 ENSGT00940000159028.j ENSGT00390000004986.f ENSGT00940000155053.c.b.a ENSGT00940000160633.a.b.c ENSGT00940000156040.f.a ENSGT00940000163831.f.a ENSGT00940000153716.A.l.b Rainbow trout MODERN SPECIES 1 ENSOMYG00000046622 ENSOMYG00000046614 ENSOMYG00000046593 ENSOMYG00000046574 ENSOMYG00000046568 ENSOMYG00000062831 ENSOMYG00000075578 ENSOMYG00000049093 zgc:153704 (ENSOMYG00000046553) ENSOMYG00000046539 ENSOMYG00000046534 apooa (ENSOMYG00000046512) sat1a.2 (ENSOMYG00000046499) prdx4 (ENSOMYG00000046477) #37 ENSOMYG00000061963 ENSOMYG00000046451 #22 ENSOMYG00000046261 #28 ENSOMYG00000046191 #27 ENSOMYG00000062890 ENSOMYG00000046182 ENSOMYG00000046173 lipia (ENSOMYG00000046158) ENSOMYG00000046149 ENSOMYG00000046102 poglut3 (ENSOMYG00000046072) ccdc82 (ENSOMYG00000046058) ENSOMYG00000046054 ARX (ENSOMYG00000046051) pcyt1bb (ENSOMYG00000046046) pdk3b (ENSOMYG00000046022) ENSOMYG00000046015 Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00390000014424.i ENSGT00950000182962.a.a.c.a ENSGT00940000157443.d.a.a ENSGT00550000074787.d.a.b.a ENSGT00940000156558.a.b.a ENSGT00940000165845.c.b ENSGT00940000155717 ENSGT01010000223723.b ENSGT01050000244868.c.b.d ENSGT00940000164731.i ENSGT00940000167353 ENSGT00510000048637 ENSGT00530000063666.b.db.g ENSGT00950000183121.b.b.b.b.x.c ENSGT00940000153430.a.a.j.a #37 ENSGT00530000063174.a.l.k #22 ENSGT00940000159370.f.a #28 ENSGT00390000008256.vd.a.b #27 ENSGT00950000182941.b.b.b.a.d.a #26 ENSGT00410000026585.b ENSGT00940000156285.`c ENSGT00870000136493.c ENSGT00940000164655 ENSGT00940000159028.j ENSGT00390000004986.f ENSGT00940000155053.c.b.a ENSGT00940000160633.a.b.c ENSGT00940000156040.f.a ENSGT00940000163831.f.a ENSGT00940000153716.A.l.b ENSGT00530000063529.A.f.a Coho salmon MODERN SPECIES 20 abhd10a (ENSOKIG00005045369) mtif3 (ENSOKIG00005045400) ENSOKIG00005045413 ENSOKIG00005045427 ENSOKIG00005045430 ATP6V1A (ENSOKIG00005045458) ZDHHC23 (ENSOKIG00005045595) ENSOKIG00005045601 ENSOKIG00005045605 zgc:153704 (ENSOKIG00005045615) ENSOKIG00005045632 ENSOKIG00005045637 apooa (ENSOKIG00005045648) sat1a.2 (ENSOKIG00005045694) prdx4 (ENSOKIG00005045718) #37 pdha1a (ENSOKIG00005045792) #22 RPS6KA3 (ENSOKIG00005045963) #28 eif1axa (ENSOKIG00005048152) #27 map7d2a (ENSOKIG00005048175) #26 ENSOKIG00005048187 lipia (ENSOKIG00005048194) ENSOKIG00005048247 poglut3 (ENSOKIG00005048418) ccdc82 (ENSOKIG00005048477) ENSOKIG00005048487 ENSOKIG00005048490 ARX (ENSOKIG00005048492) pcyt1bb (ENSOKIG00005048497) pdk3b (ENSOKIG00005048521) ENSOKIG00005048634 zdhhc20a (ENSOKIG00005048640) Chinook salmon MODERN SPECIES 23 ENSOTSG00005010055 mtif3 (ENSOTSG00005010054) WASF3 (ENSOTSG00005010052) ENSOTSG00005010050 ATP6V1A (ENSOTSG00005009998) ZDHHC23 (ENSOTSG00005009997) ENSOTSG00005009994 cst14b.1 (ENSOTSG00005009993) ENSOTSG00005009992 zgc:153704 (ENSOTSG00005009991) ENSOTSG00005009990 CXorf58 (ENSOTSG00005009988) apooa (ENSOTSG00005009986) sat1a.2 (ENSOTSG00005009983) prdx4 (ENSOTSG00005009977) #37 pdha1a (ENSOTSG00005009954) #22 rps6ka3b (ENSOTSG00005009564) #28 eif1axa (ENSOTSG00005009559) #27 si:ch211-114c12.2 (ENSOTSG00005009558) lipia (ENSOTSG00005009556) ENSOTSG00005009555 ENSOTSG00005008571 poglut3 (ENSOTSG00005008560) ENSOTSG00005008559 ccdc82 (ENSOTSG00005008557) ENSOTSG00005008555 ARX (ENSOTSG00005008553) ENSOTSG00005008552 pcyt1bb (ENSOTSG00005008551) PDK3 (ENSOTSG00005008549) ENSOTSG00005008465 Salmo ANCESTRAL SPECIES 18 ENSGT00940000156043.fb.a ENSGT00390000014424.i ENSGT00950000182962.a.a.c.a ENSGT00940000157443.d.a.a ENSGT00550000074787.d.a.b.a ENSGT00940000156558.a.b.a ENSGT00940000165845.c.b ENSGT00940000155717 ENSGT01010000223723 ENSGT01050000244868.c.b.d ENSGT00940000164731.i ENSGT00940000167353 ENSGT00530000063666.b.db.g ENSGT00950000183121.b.b.b.b.x.c ENSGT00940000153430.a.a.j.a #37 ENSGT00530000063174.a.l.k #22 ENSGT00940000159370.f.a #28 ENSGT00390000008256.vd.b.a.b #27 ENSGT00950000182941.b.b.b.a.d.a #26 ENSGT00410000026585.b ENSGT00940000156285.`c ENSGT00870000136493.c ENSGT00940000164655 ENSGT00940000159028.j ENSGT00960000187413 ENSGT00390000004986.f ENSGT00940000155053.c.b.a ENSGT00940000160633.a.b.c ENSGT00940000156040.f.a ENSGT00940000163831.f.a ENSGT00940000153716.A.l.b River trout MODERN SPECIES 10 ENSSTUG00000006920 mtif3 (ENSSTUG00000006915) ENSSTUG00000006884 ENSSTUG00000006875 ATP6V1A (ENSSTUG00000006639) zdhhc23a (ENSSTUG00000006620) ENSSTUG00000006609 ENSSTUG00000006600 ENSSTUG00000006593 zgc:153704 (ENSSTUG00000006566) ENSSTUG00000006558 ENSSTUG00000006552 ENSSTUG00000006545 apooa (ENSSTUG00000006457) sat1a.2 (ENSSTUG00000006418) pdha1a (ENSSTUG00000006251) #22 prdx4 (ENSSTUG00000006186) #37 RPS6KA3 (ENSSTUG00000005081) #28 ENSSTUG00000004974 #27 si:ch211-114c12.2 (ENSSTUG00000004961) lipia (ENSSTUG00000004959) ENSSTUG00000004942 ENSSTUG00000004658 ENSSTUG00000004625 ccdc82 (ENSSTUG00000004615) ENSSTUG00000004595 ARX (ENSSTUG00000004586) pcyt1bb (ENSSTUG00000004573) pdk3b (ENSSTUG00000004513) ENSSTUG00000004413 ENSSTUG00000003954 Atlantic salmon MODERN SPECIES 23 ENSSSAG00000000638 mtif3 (ENSSSAG00000000645) wasf3 (ENSSSAG00000000656) ENSSSAG00000000669 ENSSSAG00000000691 ENSSSAG00000000746 ENSSSAG00000000752 cst14b.1 (ENSSSAG00000000759) ENSSSAG00000004282 LIPO (ENSSSAG00000000779) ENSSSAG00000089798 apooa (ENSSSAG00000000804) ENSSSAG00000000794 sat1 (ENSSSAG00000000816) prdx4 (ENSSSAG00000000827) #37 pdha1a (ENSSSAG00000000891) #22 ENSSSAG00000110485 RPS6KA3 (ENSSSAG00000001260) #28 IF1AX (ENSSSAG00000001669) #27 map7d2a (ENSSSAG00000001683) #26 ENSSSAG00000001701 lipia (ENSSSAG00000001715) ENSSSAG00000001722 ENSSSAG00000001762 poglut3 (ENSSSAG00000093555) ENSSSAG00000095586 ccd82 (ENSSSAG00000001805) ENSSSAG00000001806 ARX (ENSSSAG00000001808) pcyt1bb (ENSSSAG00000001810) pdk3 (ENSSSAG00000001825) Huchen MODERN SPECIES 263 zgc:153704 (ENSHHUG00000050524) ENSHHUG00000050521 ENSHHUG00000050519 apooa (ENSHHUG00000050512) sat1a.2 (ENSHHUG00000050488) prdx4 (ENSHHUG00000050428) #37 pdha1a (ENSHHUG00000050295) #22 rps6ka3b (ENSHHUG00000049279) #28 ENSHHUG00000049255 #27 ENSHHUG00000049253 #26 ENSHHUG00000049249 #26 ENSHHUG00000049244 #26 si:ch211-114c12.2 (ENSHHUG00000049241) ENSHHUG00000049231 lipia (ENSHHUG00000049229) ENSHHUG00000049222 ENSHHUG00000049211 ccdc82 (ENSHHUG00000049203) ENSHHUG00000049199 ARX (ENSHHUG00000049184) pcyt1bb (ENSHHUG00000049175) pdk3b (ENSHHUG00000049112) Salmoninae ANCESTRAL SPECIES 156 ENSGT00940000159385.e.a ENSGT00390000017765.a.d ENSGT00940000156043.fb.b ENSGT00390000014424.j ENSGT00940000155647.bb ENSGT00950000182962.a.a.c.b ENSGT00940000157443.d.a.b ENSGT00550000074787.d.a.b.b ENSGT00940000156558.a.b.b ENSGT01010000225766 ENSGT01050000244868.c.b.c ENSGT00940000164731.j ENSGT00530000063666.b.db.h ENSGT00950000183121.b.b.b.b.x.d ENSGT00940000153430.a.a.j.b #37 ENSGT00530000063174.a.l.l #22 ENSGT00940000159370.f.b #28 ENSGT00390000008256.vd.a.a #27 ENSGT00950000182941.b.b.b.a.d.b.b #26 ENSGT00950000182941.b.b.b.a.d.b.a.a #26 ENSGT00410000026585.a ENSGT00940000156285.ac Huchen MODERN SPECIES 1542 mtif3 (ENSHHUG00000034079) gtf3aa (ENSHHUG00000034069) WASF3 (ENSHHUG00000034052) ENSHHUG00000034051 ATP6V1A (ENSHHUG00000033987) ZDHHC23 (ENSHHUG00000033976) ENSHHUG00000033967 zgc:153704 (ENSHHUG00000033952) ENSHHUG00000033915 apooa (ENSHHUG00000033890) sat1a.2 (ENSHHUG00000033862) prdx4 (ENSHHUG00000033768) #37 pdha1a (ENSHHUG00000033718) #22 RPS6KA3 (ENSHHUG00000032411) #28 eif1axa (ENSHHUG00000032245) #27 ENSHHUG00000032233 #26 ENSHHUG00000032228 #26 si:ch211-114c12.2 (ENSHHUG00000032218) lipia (ENSHHUG00000032179) Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00390000017765.a.d ENSGT00940000156043.fb.b ENSGT00390000014424.j ENSGT00940000155647.bb ENSGT00990000208548 ENSGT01100000265679 ENSGT00950000182962.a.a.c.b ENSGT00940000157443.d.a.b ENSGT00550000074787.d.a.b.b ENSGT00940000156558.a.b.b ENSGT01050000244868.c.b.c ENSGT00940000164731.j ENSGT00530000063666.b.db.h ENSGT00950000183121.b.b.b.b.x.d ENSGT00940000153430.a.a.j.b #37 ENSGT00530000063174.a.l.l #22 ENSGT00940000159370.f.b #28 ENSGT00390000008256.vd.a.a #27 ENSGT00950000182941.b.b.b.a.d.b.b #26 ENSGT00950000182941.b.b.b.a.d.b.a.a #26 ENSGT00410000026585.a ENSGT00940000156285.ac ENSGT00940000159028.i ENSGT00390000004986.e ENSGT00940000155053.c.b.b ENSGT00940000160633.a.b.d ENSGT00940000156040.f.b ENSGT00940000163831.f.b ENSGT00940000153716.A.l.a ENSGT00530000063529.A.f.b ENSGT00940000156371.c.a.a.a Salmo ANCESTRAL SPECIES 1 ENSGT00390000014424.j ENSGT00940000155647.bb ENSGT00990000208548 ENSGT01100000265679 ENSGT00950000182962.a.a.c.b ENSGT00940000157443.d.a.b ENSGT00550000074787.d.a.b.b ENSGT00940000156558.a.b.b ENSGT01010000225766 ENSGT00990000214106 ENSGT01050000244868.c.b.c ENSGT00940000164731.j ENSGT00530000063666.b.db.h ENSGT00950000183121.b.b.b.b.x.d ENSGT00940000153430.a.a.j.b #37 ENSGT00530000063174.a.l.l #22 ENSGT00940000159370.f.b #28 ENSGT00390000008256.vd.a.a #27 ENSGT00950000182941.b.b.b.a.d.b.a.a #26 ENSGT00410000026585.a ENSGT00940000156285.ac ENSGT00940000159028.i ENSGT00390000004986.e ENSGT00940000155053.c.b.b ENSGT00940000160633.a.b.d ENSGT00940000156040.f.b ENSGT00940000163831.f.b ENSGT00940000153716.A.l.a ENSGT00530000063529.A.f.b ENSGT00940000156371.c.b.h ENSGT00940000157542.f Atlantic salmon MODERN SPECIES 2 abhd10a (ENSSSAG00000121960) ENSSSAG00000004488 mtif3 (ENSSSAG00000004479) gtf3aa (ENSSSAG00000004473) ENSSSAG00000004453 ENSSSAG00000004437 ENSSSAG00000004419 ENSSSAG00000004368 ENSSSAG00000004351 ENSSSAG00000004334 LIPO (ENSSSAG00000004300) ENSSSAG00000104043 apooa (ENSSSAG00000004216) SAT1 (ENSSSAG00000004180) prdx4 (ENSSSAG00000079055) #37 ENSSSAG00000078097 #22 ENSSSAG00000078711 #28 ENSSSAG00000078668 #26 ENSSSAG00000113546 ENSSSAG00000107832 liph (ENSSSAG00000078034) ENSSSAG00000111407 ENSSSAG00000113571 ENSSSAG00000110707 ENSSSAG00000078007 ENSSSAG00000001912 zdhhc20a (ENSSSAG00000077981) ENSSSAG00000077973 ENSSSAG00000077954 ENSSSAG00000077939 ENSSSAG00000077931 River trout MODERN SPECIES 3 gtf3aa (ENSSTUG00000047984) ENSSTUG00000047980 ENSSTUG00000047969 WASF3 (ENSSTUG00000047954) ENSSTUG00000047947 ATP6V1A (ENSSTUG00000047912) ZDHHC23 (ENSSTUG00000047902) ENSSTUG00000047893 ENSSTUG00000047884 zgc:153704 (ENSSTUG00000047848) ENSSTUG00000047841 ENSSTUG00000047838 apooa (ENSSTUG00000047753) sat1a.2 (ENSSTUG00000047743) prdx4 (ENSSTUG00000047727) #37 pdha1a (ENSSTUG00000047190) #22 RPS6KA3 (ENSSTUG00000043357) #28 eif1axa (ENSSTUG00000043090) #27 ENSSTUG00000043071 map7d2a (ENSSTUG00000043021) #26 si:ch211-114c12.2 (ENSSTUG00000042998) ENSSTUG00000042994 lipia (ENSSTUG00000042805) poglut3 (ENSSTUG00000042684) ccdc82 (ENSSTUG00000042622) ENSSTUG00000042613 ARX (ENSSTUG00000042610) pcyt1bb (ENSSTUG00000042576) ENSSTUG00000042568 zdhhc20a (ENSSTUG00000042391) ENSSTUG00000042359 Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00390000017765.a.d ENSGT00940000156043.fb.b ENSGT00390000014424.j ENSGT00940000155647.bb ENSGT00990000208548 ENSGT01100000265679 ENSGT00950000182962.a.a.c.b ENSGT00940000157443.d.a.b ENSGT00550000074787.d.a.b.b ENSGT00940000156558.a.b.b ENSGT01050000244868.c.b.c ENSGT00940000164731.j ENSGT01000000220985 ENSGT00950000183121.b.b.b.b.x.d ENSGT00940000153430.a.a.j.b #37 ENSGT00530000063174.a.l.l #22 ENSGT00940000159370.f.b #28 ENSGT00390000008256.vd.a.a #27 ENSGT00950000182941.b.b.b.a.d.b.b #26 ENSGT00410000026585.a ENSGT00940000156285.ac ENSGT00940000159028.i ENSGT00390000004986.e ENSGT00940000155053.c.b.b ENSGT00940000160633.a.b.d ENSGT00940000156040.f.b ENSGT00940000163831.f.b ENSGT00940000153716.A.l.a ENSGT00530000063529.A.f.b ENSGT00940000156371.c.a.a.a ENSGT01100000263599 Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00390000017765.a.d ENSGT00940000156043.fb.b ENSGT00390000014424.j ENSGT00940000155647.bb ENSGT00990000208548 ENSGT01100000265679 ENSGT00950000182962.a.a.c.b ENSGT00940000157443.d.a.b ENSGT00550000074787.d.a.b.b ENSGT00940000156558.a.b.b ENSGT01050000244868.c.b.c ENSGT00940000164731.j ENSGT01000000220985 ENSGT00950000183121.b.b.b.b.x.d ENSGT00940000153430.a.a.j.b #37 ENSGT00530000063174.a.l.l #22 ENSGT00940000159370.f.b #28 ENSGT00390000008256.vd.a.a #27 ENSGT00950000182941.b.b.b.a.d.b.b #26 ENSGT00410000026585.a ENSGT00940000156285.ac ENSGT00940000159028.i ENSGT00390000004986.e ENSGT00940000155053.c.b.b ENSGT00940000160633.a.b.d ENSGT00940000156040.f.b ENSGT00940000163831.f.b ENSGT00940000153716.A.l.a ENSGT00530000063529.A.f.b ENSGT01100000263599 ENSGT00940000156371.c.b.h Coho salmon MODERN SPECIES 21 GTF3A (ENSOKIG00005049517) ENSOKIG00005049527 ENSOKIG00005049529 ENSOKIG00005049532 ENSOKIG00005049534 ENSOKIG00005049539 ENSOKIG00005038260 ENSOKIG00005038279 ATP6V1A (ENSOKIG00005038291) zdhhc23a (ENSOKIG00005038336) ENSOKIG00005038347 ENSOKIG00005038372 ENSOKIG00005038382 sat1a.2 (ENSOKIG00005038406) prdx4 (ENSOKIG00005038438) #37 pdha1a (ENSOKIG00005038589) #22 RPS6KA3 (ENSOKIG00005040075) #28 eif1axa (ENSOKIG00005047158) #27 map7d2a (ENSOKIG00005047166) #26 si:ch211-114c12.2 (ENSOKIG00005047179) LIPH (ENSOKIG00005047196) poglut3 (ENSOKIG00005047223) ccdc82 (ENSOKIG00005047248) ENSOKIG00005047261 ARX (ENSOKIG00005047263) pcyt1bb (ENSOKIG00005047268) ENSOKIG00005047282 zdhhc20a (ENSOKIG00005047316) ENSOKIG00005047563 ENSOKIG00005047582 ENSOKIG00005047604 Chinook salmon MODERN SPECIES 26 ENSOTSG00005039054 ENSOTSG00005039056 KCNA10 (ENSOTSG00005039057) ENSOTSG00005039060 GABRB3 (ENSOTSG00005039061) ENSOTSG00005039062 ENSOTSG00005039063 ENSOTSG00005039065 ATP6V1A (ENSOTSG00005039067) zdhhc23a (ENSOTSG00005039124) zgc:153704 (ENSOTSG00005039127) ENSOTSG00005039129 ENSOTSG00005039132 sat1a.2 (ENSOTSG00005039134) prdx4 (ENSOTSG00005039157) #37 pdha1a (ENSOTSG00005039201) #22 ENSOTSG00005041602 #28 eif1axa (ENSOTSG00005047069) #27 si:ch211-114c12.2 (ENSOTSG00005047071) lipia (ENSOTSG00005047072) poglut3 (ENSOTSG00005047074) ccdc82 (ENSOTSG00005047076) ENSOTSG00005047077 ARX (ENSOTSG00005047078) pcyt1bb (ENSOTSG00005047079) ENSOTSG00005047080 zdhhc20a (ENSOTSG00005047082) ENSOTSG00005047122 ENSOTSG00005047123 ENSOTSG00005047124 ENSOTSG00005047125 Rainbow trout MODERN SPECIES 364 ENSOMYG00000050600 abhd10a (ENSOMYG00000073441) ENSOMYG00000047338 gtf3aa (ENSOMYG00000047332) ENSOMYG00000073889 ENSOMYG00000047324 ENSOMYG00000061723 ENSOMYG00000047313 ENSOMYG00000047295 ENSOMYG00000065609 cpi1 (ENSOMYG00000047292) ENSOMYG00000047287 ENSOMYG00000047283 sat1a.2 (ENSOMYG00000047281) prdx4 (ENSOMYG00000047262) #37 ENSOMYG00000047174 #22 ENSOMYG00000045445 #28 ENSOMYG00000045061 #27 ENSOMYG00000059861 ENSOMYG00000062398 ENSOMYG00000045045 ENSOMYG00000045031 ENSOMYG00000058284 ENSOMYG00000045028 ccdc82 (ENSOMYG00000045020) ENSOMYG00000045013 ENSOMYG00000045011 pcyt1bb (ENSOMYG00000045009) ENSOMYG00000045002 zdhhc20a (ENSOMYG00000044995) ENSOMYG00000044990 Northern pike MODERN SPECIES 6 abhd10a (ENSELUG00000021523) ENSELUG00000000941 mtif3 (ENSELUG00000021487) gtf3aa (ENSELUG00000021503) ENSELUG00000021472 ENSELUG00000026117 ATP6V1A (ENSELUG00000021440) ZDHHC23 (ENSELUG00000021421) ENSELUG00000021414 zgc:153704 (ENSELUG00000021361) ENSELUG00000021341 ENSELUG00000021334 apooa (ENSELUG00000028327) sat1a.2 (ENSELUG00000021271) prdx4 (ENSELUG00000021240) #37 pdha1a (ENSELUG00000021178) #22 RPS6KA3 (ENSELUG00000021143) #28 IF1AX (ENSELUG00000027786) #27 map7d2a (ENSELUG00000020985) #26 si:ch211-114c12.2 (ENSELUG00000020973) lipia (ENSELUG00000020969) ENSELUG00000020964 ENSELUG00000020928 ENSELUG00000031481 poglut3 (ENSELUG00000020802) ENSELUG00000020782 ccdc82 (ENSELUG00000020768) ENSELUG00000020759 ARX (ENSELUG00000020748) pcyt1bb (ENSELUG00000020713) pdk3b (ENSELUG00000020653) Osteoglossiformes ANCESTRAL SPECIES 203 ENSGT00390000001504.d ENSGT00390000014424 ENSGT00940000154826 ENSGT01050000244868 ENSGT00940000164731.e ENSGT00530000063666.b.db ENSGT00950000183121.b.b.b.b.x ENSGT00530000063174.a.l #22 ENSGT00940000159370.a #28 ENSGT00940000156285 ENSGT00870000136493.c ENSGT00940000164655 ENSGT00940000159028 ENSGT00390000004986 ENSGT00940000160633.c.b ENSGT00940000156040.f ENSGT01030000234646.B.a.b.bb ENSGT00940000163831.g.a ENSGT00940000153716.A.m ENSGT00940000162182.d ENSGT00940000156371.e.b ENSGT01100000263825 ENSGT00940000153251.a P. kingsleyae MODERN SPECIES 323 ENSPKIG00000018532 ENSPKIG00000018545 pan3 (ENSPKIG00000018576) ENSPKIG00000018655 mtif3 (ENSPKIG00000018672) ENSPKIG00000018693 cst14a.1 (ENSPKIG00000018715) ENSPKIG00000018747 ENSPKIG00000018826 sat1a.2 (ENSPKIG00000018924) pdha1a (ENSPKIG00000018960) #22 RPS6KA3 (ENSPKIG00000019006) #28 ENSPKIG00000019062 #27 MAP7D2 (ENSPKIG00000019101) #26 lipia (ENSPKIG00000019149) ENSPKIG00000019177 ENSPKIG00000019201 poglut3 (ENSPKIG00000019239) ccdc82 (ENSPKIG00000019291) ARX (ENSPKIG00000019352) pcyt1bb (ENSPKIG00000019378) slc51a (ENSPKIG00000019420) ENSPKIG00000019456 PLCXD2 (ENSPKIG00000019482) ENSPKIG00000019493 ENSPKIG00000019501 Asian bonytongue MODERN SPECIES 18 srp54 (ENSSFOG00015013920) sec23a (ENSSFOG00015013820) clec14a (ENSSFOG00015013793) ENSSFOG00015013788 pan3 (ENSSFOG00015013716) ENSSFOG00015013695 ENSSFOG00015029601 ENSSFOG00015029480 cst14a.1 (ENSSFOG00015013664) ptgdsb.1 (ENSSFOG00015013652) ENSSFOG00015013578 klhl15 (ENSSFOG00015013554) apooa (ENSSFOG00015013529) sat1a.2 (ENSSFOG00015013511) sat1b (ENSSFOG00015028647) pdha1a (ENSSFOG00015013412) #22 pld6 (ENSSFOG00015013389) RPS6KA3 (ENSSFOG00015013306) #28 ENSSFOG00015031058 ENSSFOG00015025700 ENSSFOG00015013214 #27 MAP7D2 (ENSSFOG00015013180) #26 lipia (ENSSFOG00015013156) ENSSFOG00015013138 ENSSFOG00015012999 poglut3 (ENSSFOG00015012938) ccdc82 (ENSSFOG00015012931) ARX (ENSSFOG00015012891) pcyt1bb (ENSSFOG00015012860) PDK3 (ENSSFOG00015024813) slc51a (ENSSFOG00015012778) Spotted gar MODERN SPECIES 669 ENSLOCG00000003211 CSTB (ENSLOCG00000003223) mix23 (ENSLOCG00000003236) fam162a (ENSLOCG00000003258) KPNA1 (ENSLOCG00000003272) c8g (ENSLOCG00000003306) zgc:153704 (ENSLOCG00000003328) ENSLOCG00000003347 eif2s3 (ENSLOCG00000003369) klhl15 (ENSLOCG00000003383) ENSLOCG00000003394 apooa (ENSLOCG00000003411) sat1a.2 (ENSLOCG00000003427) acot9.2 (ENSLOCG00000003460) prdx4 (ENSLOCG00000003488) #37 pdha1b (ENSLOCG00000003508) #22 MAP3K15 (ENSLOCG00000003527) #23 SH3KBP1 (ENSLOCG00000003567) #24 ENSLOCG00000003591 MAP7D2 (ENSLOCG00000003609) #26 eif1axa (ENSLOCG00000003622) #27 rps6ka3a (ENSLOCG00000003638) #28 CNKSR2 (ENSLOCG00000003669) #29 KLHL34 (ENSLOCG00000003725) #30 smpx (ENSLOCG00000003737) #31 mbtps2 (ENSLOCG00000003747) #32 sms (ENSLOCG00000003761) #33 phex (ENSLOCG00000003780) #34 PTCHD1 (ENSLOCG00000003811) #36 ENSLOCG00000003837 ENSLOCG00000003856 Reedfish MODERN SPECIES 12 ENSECRG00000007553 ENSECRG00000007531 ENSECRG00000007521 TMPRSS7 (ENSECRG00000007492) TAGLN3 (ENSECRG00000007472) ENSECRG00000007451 tagln3b (ENSECRG00000007431) PHLDB2 (ENSECRG00000007400) ENSECRG00000007373 PLCXD2 (ENSECRG00000007358) ENSECRG00000007340 CIP2A (ENSECRG00000007313) ENSECRG00000007247 gabrr3a (ENSECRG00000007203) ADGRG2 (ENSECRG00000007164) #20 pdha1b (ENSECRG00000007129) #22 MAP3K15 (ENSECRG00000007105) #23 ENSECRG00000007088 SH3KBP1 (ENSECRG00000006955) #24 BCLAF3 (ENSECRG00000006913) #25 MAP7D2 (ENSECRG00000006666) #26 eif1axa (ENSECRG00000006607) #27 rps6ka3a (ENSECRG00000006272) #28 CNKSR2 (ENSECRG00000006154) #29 KLHL34 (ENSECRG00000006129) #30 smpx (ENSECRG00000006111) #31 mbtps2 (ENSECRG00000006093) #32 sms (ENSECRG00000006084) #33 phex (ENSECRG00000006068) #34 ENSECRG00000006057 #36 prdx4 (ENSECRG00000006048) #37 Elephant shark MODERN SPECIES 1505 cdkl5 (ENSCMIG00000010376) #15 SCML2 (ENSCMIG00000010381) #13 RAI2 (ENSCMIG00000010388) #11 ENSCMIG00000010390 #12 ENSCMIG00000010392 #12 NHS (ENSCMIG00000010394) #9 ENSCMIG00000010398 #7 ENSCMIG00000010435 txlng (ENSCMIG00000010483) syap1 (ENSCMIG00000010525) ENSCMIG00000010564 ENSCMIG00000010612 GRPR (ENSCMIG00000010665) ENSCMIG00000010667 #20 ENSCMIG00000010668 pdha1 (ENSCMIG00000010699) #22 ENSCMIG00000010815 #23 ENSCMIG00000010872 #23 ENSCMIG00000010956 #26 ENSCMIG00000010970 #25 ENSCMIG00000010973 SH3KBP1 (ENSCMIG00000010981) #24 eif1axb (ENSCMIG00000011013) #27 rps6ka3a (ENSCMIG00000011158) #28 ENSCMIG00000011304 ARHGAP6 (ENSCMIG00000011315) MID1 (ENSCMIG00000011336) ENSCMIG00000011374 clcn4 (ENSCMIG00000011514) wwc3 (ENSCMIG00000011874) cldn26 (ENSCMIG00000011920) Cyclostomata ANCESTRAL SPECIES ENSGT00530000063174.a #22 Hagfish MODERN SPECIES 259 ENSEBUG00000008818 ENSEBUG00000012901 ENSEBUG00000011707 CDK19 (ENSEBUG00000014909) ENSEBUG00000012398 ENSEBUG00000000662 #33 pdha1b (ENSEBUG00000007453) #22 atp5po (ENSEBUG00000007644) ENSEBUG00000013516 ENSEBUG00000005097 snx12 (ENSEBUG00000012681) ENSEBUG00000005106 eif1axb (ENSEBUG00000008167) #27 ENSEBUG00000008114 ENSEBUG00000017010 ttc36 (ENSEBUG00000002022) ENSEBUG00000010050 inpp5f (ENSEBUG00000011641) inaa (ENSEBUG00000015246) ENSEBUG00000000421 ENSEBUG00000004689 Ciona ANCESTRAL SPECIES 1129 ENSGT00530000063174.a #22 ENSGT00910000144179 Ciona savignyi MODERN SPECIES 253 ENSCSAVG00000005607 ENSCSAVG00000005600 ENSCSAVG00000005435 ENSCSAVG00000004941 ENSCSAVG00000004938 ENSCSAVG00000004749 ENSCSAVG00000004744 ENSCSAVG00000004742 ENSCSAVG00000004739 ENSCSAVG00000004737 ENSCSAVG00000004732 ENSCSAVG00000004729 ENSCSAVG00000004725 ENSCSAVG00000004695 ENSCSAVG00000004681 ENSCSAVG00000004640 #22 ENSCSAVG00000004185 Ciona intestinalis MODERN SPECIES 3 ENSCING00000001739 ENSCING00000017078 ENSCING00000018367 ENSCING00000000550 ENSCING00000018716 ENSCING00000023832 ENSCING00000017914 ENSCING00000023065 ENSCING00000021667 ENSCING00000024618 ENSCING00000020536 ENSCING00000000239 ENSCING00000020282 ENSCING00000005981 ENSCING00000015813 ENSCING00000010459 #22 ENSCING00000005983 ENSCING00000021693 ENSCING00000015903 ENSCING00000005975 ENSCING00000022938 pax2/5/8-b (ENSCING00000005977) ENSCING00000005978 ENSCING00000023958 ENSCING00000011242 ENSCING00000011243 ENSCING00000001259 ENSCING00000005469 ENSCING00000023637 ENSCING00000023013 ENSCING00000020713 Ecdysozoa ANCESTRAL SPECIES ENSGT00530000063174.a #22 Fruitfly DUPLICATION Fruitfly MODERN SPECIES 26 peb (FBgn0003053) Alms1b (FBgn0025387) Alms1a (FBgn0025388) pon (FBgn0025739) CG3081 (FBgn0025613) CG3062 (FBgn0025612) HLH4C (FBgn0011277) mRpL30 (FBgn0029718) Torsin (FBgn0025615) Cbp80 (FBgn0022942) CG15473 (FBgn0029719) CG3009 (FBgn0029720) fzr (FBgn0262699) Pp2C1 (FBgn0022768) ctp (FBgn0011760) Pdha (FBgn0028325) #22 CG7024 (FBgn0029722) #22 Proc-R (FBgn0029723) CG15472 (FBgn0029724) Klf15 (FBgn0025679) CG2871 (FBgn0029725) CG15471 (FBgn0029726) CG6978 (FBgn0029727) CG2861 (FBgn0029728) CG12682 (FBgn0029729) CG42594 (FBgn0260971) boil (FBgn0029730) CG6927 (FBgn0029733) CG32772 (FBgn0052772) CG4041 (FBgn0029736) CG6903 (FBgn0029737) Fruitfly MODERN SPECIES 26 Alms1b (FBgn0025387) Alms1a (FBgn0025388) pon (FBgn0025739) CG3081 (FBgn0025613) CG3062 (FBgn0025612) HLH4C (FBgn0011277) mRpL30 (FBgn0029718) Torsin (FBgn0025615) Cbp80 (FBgn0022942) CG15473 (FBgn0029719) CG3009 (FBgn0029720) fzr (FBgn0262699) Pp2C1 (FBgn0022768) ctp (FBgn0011760) Pdha (FBgn0028325) #22 CG7024 (FBgn0029722) #22 Proc-R (FBgn0029723) CG15472 (FBgn0029724) Klf15 (FBgn0025679) CG2871 (FBgn0029725) CG15471 (FBgn0029726) CG6978 (FBgn0029727) CG2861 (FBgn0029728) CG12682 (FBgn0029729) CG42594 (FBgn0260971) boil (FBgn0029730) CG6927 (FBgn0029733) CG32772 (FBgn0052772) CG4041 (FBgn0029736) CG6903 (FBgn0029737) CG44774 (FBgn0266000) Caenorhabditis elegans MODERN SPECIES 1 zyg-11 (WBGene00006996) hda-2 (WBGene00001835) swsn-7 (WBGene00007433) nrf-6 (WBGene00003813) sap-49 (WBGene00004723) arp-6 (WBGene00007434) C08B11.9 (WBGene00007436) ubh-4 (WBGene00006724) algn-6 (WBGene00007435) T05H10.1 (WBGene00011507) apn-1 (WBGene00000151) T05H10.3 (WBGene00011508) T05H10.4 (WBGene00011509) T05H10.8 (WBGene00011512) ufd-2 (WBGene00006734) pdha-1 (WBGene00011510) #22 gpcp-2 (WBGene00011511) K02C4.2 (WBGene00010501) K02C4.5 (WBGene00010503) K02C4.3 (WBGene00010502) ltd-1 (WBGene00003089) sre-2 (WBGene00005150) sfxn-5 (WBGene00044049) chst-1 (WBGene00008050) C41C4.9 (WBGene00008054) lron-4 (WBGene00008051) ire-1 (WBGene00002147) unc-105 (WBGene00006832) ulp-4 (WBGene00006739) ctns-1 (WBGene00008052) cdc-48.2 (WBGene00008053) Bilateria ANCESTRAL SPECIES ENSGT00530000063174.b ##22 Ecdysozoa ANCESTRAL SPECIES ENSGT00530000063174.b ##22 Fruitfly MODERN SPECIES 19 GstZ2 (FBgn0037697) CG16779 (FBgn0037698) phu (FBgn0043791) RhoL (FBgn0014380) CG8149 (FBgn0037700) rump (FBgn0267790) Ras85D (FBgn0003205) Rlb1 (FBgn0014022) mRpL47 (FBgn0014023) Kdm3 (FBgn0037703) CG8176 (FBgn0037702) by (FBgn0000244) mura (FBgn0037705) RnpS1 (FBgn0037707) CG9386 (FBgn0037708) CG8199 (FBgn0037709) ##22 AP-1mu (FBgn0024833) MBD-like (FBgn0027950) CG9393 (FBgn0037710) Vps45 (FBgn0261049) CG16789 (FBgn0037712) CG16790 (FBgn0037713) CG9396 (FBgn0037714) CG9399 (FBgn0037715) Kap-alpha3 (FBgn0027338) Son (FBgn0037716) CG8301 (FBgn0037717) CG33654 (FBgn0053654) P58IPK (FBgn0037718) bocks (FBgn0037719) CG8312 (FBgn0037720) Caenorhabditis elegans MODERN SPECIES 2 F14F7.7 (WBGene00206390) F14F7.4 (WBGene00008811) cyp-13A12 (WBGene00008810) cyp-13A11 (WBGene00008809) col-98 (WBGene00000673) snf-7 (WBGene00004906) ZK1010.10 (WBGene00164985) ZK1010.8 (WBGene00014181) col-97 (WBGene00000672) ZK1010.12 (WBGene00271703) ZK1010.5 (WBGene00014179) ZK1010.4 (WBGene00014178) frg-1 (WBGene00014177) ubq-2 (WBGene00006728) ZK1010.2 (WBGene00014176) bckd-1A (WBGene00012713) ##22 ttm-1 (WBGene00012712) Y39E4A.1 (WBGene00012711) unc-25 (WBGene00006762) epg-3 (WBGene00012559) Y37D8A.19 (WBGene00012557) rbm-7 (WBGene00012558) mrps-10 (WBGene00012556) npp-25 (WBGene00012555) Y37D8A.16 (WBGene00012554) flp-14 (WBGene00001457) cox-5A (WBGene00012553) Y37D8A.29 (WBGene00303086) unc-71 (WBGene00006804) enu-3.5 (WBGene00012552) cec-7 (WBGene00012551) Chordata ANCESTRAL SPECIES ENSGT00530000063174.b ##22 Ciona ANCESTRAL SPECIES ENSGT00530000063174.b ##22 Ciona savignyi MODERN SPECIES 70 ENSCSAVG00000009262 ENSCSAVG00000009235 ENSCSAVG00000009234 ENSCSAVG00000008593 ENSCSAVG00000008591 ENSCSAVG00000008590 ENSCSAVG00000008589 ENSCSAVG00000008180 ENSCSAVG00000008177 ENSCSAVG00000008173 ENSCSAVG00000008168 ENSCSAVG00000008164 ENSCSAVG00000008161 ENSCSAVG00000008114 ENSCSAVG00000008112 ENSCSAVG00000008109 ##22 ENSCSAVG00000008037 ENSCSAVG00000008028 ENSCSAVG00000008020 ENSCSAVG00000007838 ENSCSAVG00000007690 ENSCSAVG00000007679 ENSCSAVG00000007654 ENSCSAVG00000007650 ENSCSAVG00000007644 ENSCSAVG00000007619 ENSCSAVG00000007613 ENSCSAVG00000007610 ENSCSAVG00000007604 ENSCSAVG00000007595 ENSCSAVG00000007593 Ciona intestinalis MODERN SPECIES 8 ENSCING00000024864 ENSCING00000008062 ENSCING00000008063 ENSCING00000013636 ENSCING00000017925 ENSCING00000008064 ENSCING00000008059 ENSCING00000022171 ENSCING00000022767 ENSCING00000025023 ENSCING00000019769 ENSCING00000013635 ENSCING00000008056 ENSCING00000019251 ENSCING00000008057 ENSCING00000008058 ##22 ENSCING00000019586 ENSCING00000018171 ENSCING00000021287 ENSCING00000008054 ENSCING00000021380 ENSCING00000019810 ENSCING00000018497 ENSCING00000008052 ENSCING00000008043 ENSCING00000008039 ENSCING00000023564 ENSCING00000020231 ENSCING00000018925 ENSCING00000008028 ENSCING00000019563 Vertebrata ANCESTRAL SPECIES ENSGT00530000063174.b ##22 Cyclostomata ANCESTRAL SPECIES 624 ENSGT00530000063174.b ##22 ENSGT00940000156110 Lamprey MODERN SPECIES 760 bckdha (ENSPMAG00000000053) ##22 aldh6a1 (ENSPMAG00000000056) ENSPMAG00000000061 Hagfish MODERN SPECIES 1501 ENSEBUG00000010658 ENSEBUG00000015670 g6pc1a.2 (ENSEBUG00000007365) ENSEBUG00000016774 ENSEBUG00000007686 ENSEBUG00000002457 ddx18 (ENSEBUG00000006265) cnpy2 (ENSEBUG00000013660) bckdha (ENSEBUG00000009993) ##22 aldh6a1 (ENSEBUG00000006716) Gnathostomata ANCESTRAL SPECIES ENSGT00530000063174.b ##22 Elephant shark MODERN SPECIES 2945 BCKDHA (ENSCMIG00000003817) ##22 Euteleostomi ANCESTRAL SPECIES 457 ENSGT00940000161057 ENSGT00390000014139 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00940000161895 ENSGT00530000063174.b ##22 ENSGT00390000014682 ENSGT00940000161445 Actinopterygii ANCESTRAL SPECIES 209 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00440000037341.b.b ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000158431.a.a.a.a.b.a ENSGT00940000160330 ENSGT00940000159112.b ENSGT00940000159256 ENSGT00940000161069 ENSGT00390000014682 ENSGT00940000161445 Reedfish MODERN SPECIES 9 LRTM2 (ENSECRG00000022414) ENSECRG00000022421 ENSECRG00000022429 ech1 (ENSECRG00000022437) HNRNPL (ENSECRG00000022447) ENSECRG00000022452 ENSECRG00000022457 srsf7a (ENSECRG00000022461) slc8a2a (ENSECRG00000022465) actn4 (ENSECRG00000022497) ENSECRG00000022527 eif3k (ENSECRG00000022537) MAP4K1 (ENSECRG00000022548) TMEM91 (ENSECRG00000022576) exosc5 (ENSECRG00000022583) bckdha (ENSECRG00000022598) ##22 B3GNT8 (ENSECRG00000022609) ENSECRG00000022611 napab (ENSECRG00000022618) ENSECRG00000022626 PLD3 (ENSECRG00000022637) foxa3 (ENSECRG00000022647) ENSECRG00000022651 irf2bp1 (ENSECRG00000022654) nova2 (ENSECRG00000022658) ENSECRG00000022663 GPR4 (ENSECRG00000022667) eml2 (ENSECRG00000022671) ENSECRG00000022693 ENSECRG00000022717 CLIP3 (ENSECRG00000022745) Neopterygii ANCESTRAL SPECIES 184 ENSGT00940000160457 ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000155312.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000158431.a.a.a.a.b.a ENSGT00940000160330 ENSGT00940000159112.b ENSGT00940000159256 ENSGT00940000161069 ENSGT00390000014682 ENSGT00940000161445 Spotted gar MODERN SPECIES 658 sirt2 (ENSLOCG00000014292) kptn (ENSLOCG00000014286) dmac2 (ENSLOCG00000014282) ENSLOCG00000014276 RYR1 (ENSLOCG00000014248) ENSLOCG00000014247 RASGRP4 (ENSLOCG00000014243) HNRNPUL1 (ENSLOCG00000014236) opa3 (ENSLOCG00000014233) ENSLOCG00000014231 ENSLOCG00000014229 ENSLOCG00000014228 RSPH6A (ENSLOCG00000014226) TMEM91 (ENSLOCG00000014223) exosc5 (ENSLOCG00000014220) bckdha (ENSLOCG00000014217) ##22 B3GNT8 (ENSLOCG00000017562) napab (ENSLOCG00000014212) ENSLOCG00000014210 ENSLOCG00000014209 ENSLOCG00000014207 BICRA (ENSLOCG00000014205) ehd2b (ENSLOCG00000014200) psmd8 (ENSLOCG00000014197) ENSLOCG00000014195 sars2 (ENSLOCG00000014192) ENSLOCG00000014188 psma6l (ENSLOCG00000014186) nfkbib (ENSLOCG00000014185) gjd1a (ENSLOCG00000014182) nop53 (ENSLOCG00000014178) Osteoglossocephalai ANCESTRAL SPECIES 102 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000162064 ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000155312.b ENSGT00940000159883 ENSGT00440000037341.b.b ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000158431.a.a.a.a.b.a.c.b ENSGT00940000160330 ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000159256.o ENSGT00940000175063 ENSGT00390000014835 ENSGT01100000263497.D ENSGT00940000157181 ENSGT00390000016213 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 121 ENSGT00940000153936.b.b ENSGT00940000165793 ENSGT00940000163335 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000155312.b ENSGT00940000159883.f ENSGT00440000037341.b.b ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00950000183147.A.b.a.d ENSGT00530000063174.b.a ##22 ENSGT00390000005826.a.a ENSGT00940000158431.a.a.a.a.b.a.c.b ENSGT00940000160330 ENSGT00940000159112.b.p ENSGT00940000159256.o.a ENSGT00940000175063 ENSGT00390000014835 ENSGT01100000263497.D ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000164481.b.b ENSGT00530000063252.a.a.a ENSGT00940000159682 ENSGT00940000157114.d ENSGT00940000163088 P. kingsleyae MODERN SPECIES 63 AXL (ENSPKIG00000017740) RYR1 (ENSPKIG00000017583) ENSPKIG00000017474 ENSPKIG00000017417 ENSPKIG00000017400 ENSPKIG00000017389 ENSPKIG00000017381 im:7138535 (ENSPKIG00000017343) ENSPKIG00000017308 ENSPKIG00000017275 ENSPKIG00000017264 ENSPKIG00000017249 SYMPK (ENSPKIG00000017132) RSPH6A (ENSPKIG00000017045) ENSPKIG00000017019 bckdha (ENSPKIG00000016986) ##22 ENSPKIG00000016966 napab (ENSPKIG00000016919) ENSPKIG00000016895 ENSPKIG00000016860 BICRA (ENSPKIG00000016826) ehd2b (ENSPKIG00000016765) ENSPKIG00000016722 SPRED3 (ENSPKIG00000016691) sycn.2 (ENSPKIG00000016677) tmem45b (ENSPKIG00000016638) nfrkb (ENSPKIG00000016542) st14b (ENSPKIG00000016484) aplp2 (ENSPKIG00000016331) chek1 (ENSPKIG00000016169) cdon (ENSPKIG00000016112) Asian bonytongue MODERN SPECIES 18 ENSSFOG00015028328 arrb1 (ENSSFOG00015007507) ppp5c (ENSSFOG00015007455) ENSSFOG00015026743 TGFB1 (ENSSFOG00015032951) b9d2 (ENSSFOG00015007392) ENSSFOG00015007375 AXL (ENSSFOG00015007363) ENSSFOG00015007116 ENSSFOG00015007032 im:7138535 (ENSSFOG00015007019) hnrnpul1 (ENSSFOG00015007000) SYMPK (ENSSFOG00015006974) ENSSFOG00015006947 ENSSFOG00015006932 bckdha (ENSSFOG00015006902) ##22 napab (ENSSFOG00015006863) ENSSFOG00015030910 BICRA (ENSSFOG00015030372) EHD2 (ENSSFOG00015006753) ENSSFOG00015028442 sycn.2 (ENSSFOG00015006712) gng8 (ENSSFOG00015006697) tmem45b (ENSSFOG00015006674) nfrkb (ENSSFOG00015006360) aplp2 (ENSSFOG00015006295) chek1 (ENSSFOG00015006236) cdon (ENSSFOG00015006205) ENSSFOG00015006185 ENSSFOG00015029158 ENSSFOG00015005998 Osteoglossiformes ANCESTRAL SPECIES 304 ENSGT00940000159883.e ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a.c ENSGT00940000153348.C ENSGT00530000063174.b.b ##22 ENSGT00940000161895.a.a ENSGT00940000159112.b.o ENSGT00940000159256.o.b ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.a ENSGT00530000063252.a.a.b ENSGT00940000158740 ENSGT00940000157114.c ENSGT00730000110915.a P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 84 ENSPKIG00000012431 tgfb1a (ENSPKIG00000012463) ENSPKIG00000012490 cyp2y3 (ENSPKIG00000012517) ENSPKIG00000012536 ENSPKIG00000012555 ENSPKIG00000012585 ENSPKIG00000012612 ENSPKIG00000012714 rasgrp4 (ENSPKIG00000012918) HNRNPUL1 (ENSPKIG00000012976) opa3 (ENSPKIG00000013000) ppp1r13l (ENSPKIG00000013033) TMEM91 (ENSPKIG00000013078) exosc5 (ENSPKIG00000013092) bckdha (ENSPKIG00000013130) ##22 bckdha (ENSPKIG00000013173) ##22 ENSPKIG00000013196 BICRA (ENSPKIG00000013218) EHD2 (ENSPKIG00000013262) psmd8 (ENSPKIG00000013294) spred3 (ENSPKIG00000013316) dhx34 (ENSPKIG00000013394) ENSPKIG00000013516 APLP2 (ENSPKIG00000013553) prdm10 (ENSPKIG00000013587) ENSPKIG00000013629 cdon (ENSPKIG00000013654) bcl9l (ENSPKIG00000013683) DDX6 (ENSPKIG00000013728) TREH (ENSPKIG00000013790) P. kingsleyae MODERN SPECIES 84 tgfb1a (ENSPKIG00000012463) ENSPKIG00000012490 cyp2y3 (ENSPKIG00000012517) ENSPKIG00000012536 ENSPKIG00000012555 ENSPKIG00000012585 ENSPKIG00000012612 ENSPKIG00000012714 rasgrp4 (ENSPKIG00000012918) HNRNPUL1 (ENSPKIG00000012976) opa3 (ENSPKIG00000013000) ppp1r13l (ENSPKIG00000013033) TMEM91 (ENSPKIG00000013078) exosc5 (ENSPKIG00000013092) bckdha (ENSPKIG00000013130) ##22 bckdha (ENSPKIG00000013173) ##22 ENSPKIG00000013196 BICRA (ENSPKIG00000013218) EHD2 (ENSPKIG00000013262) psmd8 (ENSPKIG00000013294) spred3 (ENSPKIG00000013316) dhx34 (ENSPKIG00000013394) ENSPKIG00000013516 APLP2 (ENSPKIG00000013553) prdm10 (ENSPKIG00000013587) ENSPKIG00000013629 cdon (ENSPKIG00000013654) bcl9l (ENSPKIG00000013683) DDX6 (ENSPKIG00000013728) TREH (ENSPKIG00000013790) ENSPKIG00000013852 Clupeocephala ANCESTRAL SPECIES 9 ENSGT00940000158785 ENSGT00940000160457.b ENSGT00940000168097 ENSGT00940000160457.a ENSGT00940000161428 ENSGT01080000258246 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000158431.a.a.a.a.b.a.c.b ENSGT00940000160330 ENSGT00940000159256.o ENSGT00940000175063 ENSGT00390000014835 ENSGT01100000263497.D ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000164481.b.b ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000014682 ENSGT00940000161445 Otomorpha ANCESTRAL SPECIES 116 ENSGT00940000160378.jb ENSGT00940000155288.b ENSGT00940000155312.b ENSGT00390000016686 ENSGT00390000009588 ENSGT00390000015123 ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000158431.a.a.a.a.b.a.c.b ENSGT00940000160330 ENSGT00940000159112.b ENSGT00940000159256.o ENSGT00940000175063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000165538 ENSGT00940000164481.b.b.h ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00670000099465 Otophysi ANCESTRAL SPECIES 243 ENSGT00940000160378.jb ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000157165.e.a ENSGT00390000010608 ENSGT00940000153892.A ENSGT00940000160667 ENSGT00940000166395 ENSGT00940000160358 ENSGT00390000005773 ENSGT00940000161494 ENSGT00940000160518 ENSGT00940000174677 ENSGT00940000159183 ENSGT00390000003107.b.j ENSGT00940000158292.b ENSGT00940000166238.a ENSGT00940000156119 Characiphysae ANCESTRAL SPECIES 66 ENSGT00940000161080 ENSGT00940000157577.c.b ENSGT00940000160004.e ENSGT00940000164973 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000009423.b ENSGT00940000164056 ENSGT00980000199080 ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000157165.e.a ENSGT00390000010608 ENSGT00940000153892.A ENSGT00940000160667 ENSGT00940000166395 ENSGT00940000160358 ENSGT00390000005773 ENSGT00940000161494 ENSGT00940000160518 ENSGT00940000174677 ENSGT00940000159183 ENSGT00390000003107.b.j ENSGT00940000158292.b ENSGT00940000166238.a ENSGT00940000156119 Characiphysae_b ANCESTRAL SPECIES 72 ENSGT00940000161080 ENSGT00940000157577.c.b ENSGT00940000160004.e ENSGT00940000164973 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000009423.b ENSGT00940000164056 ENSGT00980000199080 ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000157165.e.a ENSGT00390000010608 ENSGT00940000153892.A ENSGT00940000160667 ENSGT00940000166395 ENSGT00940000160358 ENSGT00390000005773 ENSGT00940000161494 ENSGT00940000160518 ENSGT00940000174677 ENSGT00940000159183 ENSGT00390000003107.b.j ENSGT00940000158292.b ENSGT00940000166238.a ENSGT00940000156119 Characoidei ANCESTRAL SPECIES 76 ENSGT00940000156626.ab ENSGT01050000244956.a.a ENSGT00940000160004.e ENSGT00940000164973 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000009423.b ENSGT00940000164056 ENSGT00980000199080 ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000157165.e.a ENSGT00390000010608 ENSGT00940000153892.A ENSGT00940000160667 ENSGT00940000166395 ENSGT00940000160358 ENSGT00390000005773 ENSGT00940000161494 ENSGT00940000160518 ENSGT00940000174677 ENSGT00940000159183 ENSGT00390000003107.b.j ENSGT00940000158292.b ENSGT00940000166238.a ENSGT00940000156119 Red-bellied piranha MODERN SPECIES ENSPNAG00000030067 ENSPNAG00000030068 ENSPNAG00000030071 ENSPNAG00000030073 ENSPNAG00000030075 yif1b (ENSPNAG00000030078) ENSPNAG00000030079 ENSPNAG00000030081 ENSPNAG00000030082 rasgrp4 (ENSPNAG00000030083) hnrnpul1 (ENSPNAG00000030085) opa3 (ENSPNAG00000030087) ppp1r13l (ENSPNAG00000030094) TMEM91 (ENSPNAG00000030097) exosc5 (ENSPNAG00000030099) bckdha (ENSPNAG00000030101) ##22 b3gat1a (ENSPNAG00000004693) Mexicana tetra MODERN SPECIES 43 si:cabz01090165.1 (ENSAMXG00000004538) ENSAMXG00000034874 ENSAMXG00000039894 ENSAMXG00000034557 ENSAMXG00000004586 ENSAMXG00000036865 rasgrp4 (ENSAMXG00000004606) ENSAMXG00000004623 opa3 (ENSAMXG00000036325) ppp1r13l (ENSAMXG00000004656) TMEM91 (ENSAMXG00000004664) exosc5 (ENSAMXG00000034946) bckdha (ENSAMXG00000030349) ##22 b3gat1a (ENSAMXG00000004678) siae (ENSAMXG00000032392) clasrp (ENSAMXG00000001136) znf296 (ENSAMXG00000001129) ENSAMXG00000032872 fosb (ENSAMXG00000037476) si:ch211-160d20.3 (ENSAMXG00000034804) ttc9b (ENSAMXG00000042123) MAP3K10 (ENSAMXG00000015126) SIPA1L3 (ENSAMXG00000031508) qpctla (ENSAMXG00000015202) six9 (ENSAMXG00000041788) six5 (ENSAMXG00000015232) tbcb (ENSAMXG00000038054) yap1 (ENSAMXG00000015263) Electric eel MODERN SPECIES 751 yif1b (ENSEEEG00000014600) ENSEEEG00000014596 ENSEEEG00000014595 rasgrp4 (ENSEEEG00000014594) HNRNPUL1 (ENSEEEG00000014593) opa3 (ENSEEEG00000014591) ENSEEEG00000014589 ppp1r13l (ENSEEEG00000014588) exosc5 (ENSEEEG00000014587) bckdha (ENSEEEG00000014586) ##22 b3gat1a (ENSEEEG00000014581) Channel catfish MODERN SPECIES 23 DUSP8 (ENSIPUG00000011348) si:cabz01090165.1 (ENSIPUG00000011364) ENSIPUG00000011378 ENSIPUG00000011386 ENSIPUG00000011397 ENSIPUG00000011402 yif1b (ENSIPUG00000011411) ENSIPUG00000011486 ENSIPUG00000011580 rasgrp4 (ENSIPUG00000011597) ENSIPUG00000011639 opa3 (ENSIPUG00000011714) ppp1r13l (ENSIPUG00000011725) TMEM91 (ENSIPUG00000011777) Exosc5 (ENSIPUG00000011820) bckdha (ENSIPUG00000011847) ##22 b3gat1a (ENSIPUG00000011867) siae (ENSIPUG00000011900) clasrp (ENSIPUG00000011928) znf296 (ENSIPUG00000011956) ENSIPUG00000011968 fosb (ENSIPUG00000012056) c4h19orf47 (ENSIPUG00000012092) ttc9b (ENSIPUG00000012108) map3k10 (ENSIPUG00000012119) sipa1l3 (ENSIPUG00000012143) qpctla (ENSIPUG00000012203) six9 (ENSIPUG00000012212) six5 (ENSIPUG00000012233) tbcb (ENSIPUG00000012250) yap1 (ENSIPUG00000012368) Cyprinoidei ANCESTRAL SPECIES 10 ENSGT00730000111174 ENSGT00390000013374 ENSGT00940000166445 ENSGT00390000007046.b.a.b ENSGT00390000012368 ENSGT00940000160033.c ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000157165.e.a ENSGT00390000010608 ENSGT00940000153892.A ENSGT00940000160667 ENSGT00940000166395 ENSGT00940000160358.j ENSGT00390000005773 ENSGT00940000161494 ENSGT00940000160518 ENSGT00940000159183 ENSGT00390000003107.b.j ENSGT00940000158292.b ENSGT00940000166238.a ENSGT00940000156119 ENSGT00510000046760.a.ab Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 30 ENSGT00940000155481.a ENSGT01060000248588.a.d.a.h.a.a ENSGT00940000159713.i ENSGT00940000155492.a.b.i.a ENSGT00730000111174 ENSGT00390000013374.b ENSGT00940000166445 ENSGT00390000007046.b.a.b.a.b ENSGT00940000160033.c.a ENSGT00940000155288.b.x.b.b ENSGT00940000159883.c ENSGT00390000009795.t ENSGT00940000160551.b ENSGT00950000183147.A.b.a.b ENSGT00940000153348.C.g ENSGT00530000063174.b.c ##22 ENSGT00940000157165.e.a.b ENSGT00940000153892.A.e ENSGT00940000160667.a ENSGT00940000166395.b ENSGT00940000160358.j ENSGT00390000005773.b ENSGT00940000160518.h ENSGT00940000159183.`b.b ENSGT00390000003107.b.j.a ENSGT00940000158292.b.b ENSGT00940000166238.a.a ENSGT00940000156119.b ENSGT00510000046760.a.ab.g.b ENSGT00390000013180.l ENSGT00390000001927.a.a.e Cyprininae_a ANCESTRAL SPECIES 15 ENSGT00730000111174 ENSGT00390000013374.b ENSGT00390000007046.b.a.b.b ENSGT00940000160033.c.a ENSGT00940000155288.b.x.b.b ENSGT00940000159883.c ENSGT00390000009795.t ENSGT00940000160551.b ENSGT00950000183147.A.b.a.b ENSGT00940000153348.C.g ENSGT00530000063174.b.c ##22 ENSGT00940000157165.e.a.b ENSGT00940000153892.A.e ENSGT00940000160667.a ENSGT00940000166395.b ENSGT00940000160358.j ENSGT00390000005773.b ENSGT00940000161494.h ENSGT00940000160518.h ENSGT00940000159183.`b.b ENSGT00390000003107.b.j.a ENSGT00940000158292.b.b ENSGT00940000166238.a.a ENSGT00940000156119.b ENSGT00510000046760.a.ab.g.b ENSGT00390000013180.k.b Golden-line barbel MODERN SPECIES 710 rasgrp4 (ENSSGRG00000052223) HNRNPUL1 (ENSSGRG00000052224) opa3 (ENSSGRG00000052227) ppp1r13l (ENSSGRG00000052228) TMEM91 (ENSSGRG00000052230) exosc5 (ENSSGRG00000052231) bckdha (ENSSGRG00000052232) ##22 b3gat1a (ENSSGRG00000052250) clasrp (ENSSGRG00000052261) znf296 (ENSSGRG00000052264) ENSSGRG00000052267 fosb (ENSSGRG00000052289) si:ch211-160d20.3 (ENSSGRG00000052292) ttc9b (ENSSGRG00000052296) MAP3K10 (ENSSGRG00000052297) ENSSGRG00000052298 ENSSGRG00000052299 ENSSGRG00000052302 qpctla (ENSSGRG00000052311) six5 (ENSSGRG00000052312) tbcb (ENSSGRG00000052313) ENSSGRG00000052321 Common carp reference MODERN SPECIES 9 KCNAB1 (ENSCCRG00000016900) tiparp (ENSCCRG00000003020) ssr3 (ENSCCRG00000067142) ENSCCRG00000059068 cfap45 (ENSCCRG00000023501) tbrg1 (ENSCCRG00000011786) snrpa (ENSCCRG00000036823) itpkcb (ENSCCRG00000076850) ryr1b (ENSCCRG00000072696) rasgrp4 (ENSCCRG00000019216) ENSCCRG00000030587 opa3 (ENSCCRG00000081683) ppp1r13l (ENSCCRG00000036772) TMEM91 (ENSCCRG00000036767) exosc5 (ENSCCRG00000036757) bckdha (ENSCCRG00000063296) ##22 b3gat1a (ENSCCRG00000064741) ENSCCRG00000073543 clasrp (ENSCCRG00000027716) ENSCCRG00000078635 fosb (ENSCCRG00000079517) si:ch211-160d20.3 (ENSCCRG00000062192) ttc9b (ENSCCRG00000072946) ENSCCRG00000008845 ENSCCRG00000072352 qpctla (ENSCCRG00000009135) six9 (ENSCCRG00000062097) six5 (ENSCCRG00000033089) tbcb (ENSCCRG00000010484) yap1 (ENSCCRG00000009350) ENSCCRG00000068775 Goldfish MODERN SPECIES 37 rnf7 (ENSCARG00000069001) ENSCARG00000068981 pgr (ENSCARG00000068944) ENSCARG00000068890 cfap45 (ENSCARG00000068870) tbrg1 (ENSCARG00000068814) ENSCARG00000068796 snrpa (ENSCARG00000068770) itpkcb (ENSCARG00000068764) ryr1b (ENSCARG00000068568) rasgrp4 (ENSCARG00000068500) opa3 (ENSCARG00000068487) ppp1r13l (ENSCARG00000068477) TMEM91 (ENSCARG00000068464) exosc5 (ENSCARG00000068451) bckdha (ENSCARG00000068424) ##22 b3gat1a (ENSCARG00000068400) clasrp (ENSCARG00000068368) znf296 (ENSCARG00000068332) ENSCARG00000068309 fosb (ENSCARG00000068287) si:ch211-160d20.3 (ENSCARG00000068259) MAP3K10 (ENSCARG00000068241) ENSCARG00000068126 qpctla (ENSCARG00000068101) six9 (ENSCARG00000068093) six5 (ENSCARG00000068083) tbcb (ENSCARG00000068076) yap1 (ENSCARG00000068036) luzp2 (ENSCARG00000068020) nucb2b (ENSCARG00000067885) Cyprininae ANCESTRAL SPECIES 47 ENSGT00390000007046.b.a.b.a.a ENSGT00390000012368 ENSGT00940000160033.c.b ENSGT00940000155288.b.x.b.a ENSGT00940000159883.d ENSGT00940000157823.kb ENSGT00390000009795.s ENSGT00940000160551.a ENSGT00950000183147.A.b.a.a ENSGT00940000153348.C.h ENSGT00530000063174.b.d ##22 ENSGT00940000157165.e.a.a ENSGT00390000010608 ENSGT00940000153892.A.f ENSGT00940000160667.b ENSGT00940000166395.a ENSGT00940000160358.i ENSGT00390000005773.a ENSGT00940000161494 ENSGT00940000160518.g ENSGT00940000159183.`b.a ENSGT00390000003107.b.j.b ENSGT00940000158292.b.a ENSGT00940000166238.a.b ENSGT00940000156119.a ENSGT00510000046760.a.ab.h Cyprininae_a ANCESTRAL SPECIES 133 ENSGT00390000013374.a ENSGT00940000166445 ENSGT00390000007046.b.a.b.a.a ENSGT00390000012368 ENSGT00940000160033.c.b ENSGT00940000155288.b.x.b.a ENSGT00940000159883.d ENSGT00940000157823.kb ENSGT00390000009795.s ENSGT00940000160551.a ENSGT00950000183147.A.b.a.a ENSGT00940000153348.C.h ENSGT00530000063174.b.d ##22 ENSGT00940000157165.e.a.a ENSGT00390000010608 ENSGT00940000153892.A.f ENSGT00940000160667.b ENSGT00940000166395.a ENSGT00940000160358.i ENSGT00390000005773.a ENSGT00940000161494.g ENSGT00940000160518.g ENSGT00940000159183.`b.a ENSGT00390000003107.b.j.b ENSGT00940000158292.b.a ENSGT00940000166238.a.b ENSGT00940000156119.a ENSGT00510000046760.a.ab.h Golden-line barbel MODERN SPECIES 502 ENSSGRG00000024261 opa3 (ENSSGRG00000024260) ppp1r13l (ENSSGRG00000024259) TMEM91 (ENSSGRG00000024258) exosc5 (ENSSGRG00000024257) bckdha (ENSSGRG00000024234) ##22 b3gat1a (ENSSGRG00000024206) siae (ENSSGRG00000024202) clasrp (ENSSGRG00000024141) znf296 (ENSSGRG00000024139) ENSSGRG00000024061 fosb (ENSSGRG00000024059) si:ch211-160d20.3 (ENSSGRG00000024058) ttc9b (ENSSGRG00000024057) MAP3K10 (ENSSGRG00000024056) ENSSGRG00000024053 ENSSGRG00000023966 qpctla (ENSSGRG00000023956) six9 (ENSSGRG00000023955) six5 (ENSSGRG00000023952) tbcb (ENSSGRG00000023941) Common carp reference MODERN SPECIES 19 ENSCCRG00000080868 tbrg1 (ENSCCRG00000028561) ENSCCRG00000080896 ENSCCRG00000073773 ENSCCRG00000060665 snrpa (ENSCCRG00000011793) zgc:153119 (ENSCCRG00000071207) itpkcb (ENSCCRG00000011802) ryr1b (ENSCCRG00000052604) ENSCCRG00000059715 rasgrp4 (ENSCCRG00000039633) opa3 (ENSCCRG00000080317) ppp1r13l (ENSCCRG00000079572) TMEM91 (ENSCCRG00000059122) exosc5 (ENSCCRG00000069190) bckdha (ENSCCRG00000036779) ##22 b3gat1a (ENSCCRG00000072321) siae (ENSCCRG00000077901) clasrp (ENSCCRG00000076450) znf296 (ENSCCRG00000075718) ENSCCRG00000063118 ENSCCRG00000081797 si:ch211-160d20.3 (ENSCCRG00000008968) ENSCCRG00000058889 ENSCCRG00000009759 qpctla (ENSCCRG00000009775) six5 (ENSCCRG00000064988) tbcb (ENSCCRG00000058208) ENSCCRG00000070059 yap1 (ENSCCRG00000033074) ENSCCRG00000062734 Goldfish MODERN SPECIES 9 zgc:158482 (ENSCARG00000002690) gatm (ENSCARG00000002711) ENSCARG00000002730 ENSCARG00000002733 ENSCARG00000002734 snrpa (ENSCARG00000002745) zgc:153119 (ENSCARG00000002762) itpkcb (ENSCARG00000002768) ryr1b (ENSCARG00000003067) rasgrp4 (ENSCARG00000006386) HNRNPUL1 (ENSCARG00000006475) opa3 (ENSCARG00000006723) ppp1r13l (ENSCARG00000006738) TMEM91 (ENSCARG00000006747) exosc5 (ENSCARG00000006758) bckdha (ENSCARG00000006788) ##22 b3gat1a (ENSCARG00000006814) siae (ENSCARG00000006844) clasrp (ENSCARG00000006969) znf296 (ENSCARG00000007106) ENSCARG00000007146 FOSB (ENSCARG00000007212) si:ch211-160d20.3 (ENSCARG00000007241) ttc9b (ENSCARG00000007251) MAP3K10 (ENSCARG00000007271) ENSCARG00000007318 six9 (ENSCARG00000007798) six5 (ENSCARG00000007808) tbcb (ENSCARG00000007816) ENSCARG00000007823 yap1 (ENSCARG00000007850) Zebrafish MODERN SPECIES 9 ENSDARG00000114191 ENSDARG00000096365 cfap45 (ENSDARG00000068103) tbrg1 (ENSDARG00000074996) ENSDARG00000068104 snrpa (ENSDARG00000018890) ACTMAP (ENSDARG00000039513) itpkcb (ENSDARG00000067741) ryr1b (ENSDARG00000023797) rasgrp4 (ENSDARG00000061796) hnrnpul1 (ENSDARG00000040564) opa3 (ENSDARG00000061761) ppp1r13l (ENSDARG00000013777) TMEM91 (ENSDARG00000068456) exosc5 (ENSDARG00000040557) bckdha (ENSDARG00000040555) ##22 b3gat1a (ENSDARG00000040547) siae (ENSDARG00000040527) clasrp (ENSDARG00000061742) znf296 (ENSDARG00000077897) ENSDARG00000010758 fosb (ENSDARG00000055751) C18H19orf47 (ENSDARG00000020611) ttc9b (ENSDARG00000068421) ENSDARG00000089627 ENSDARG00000055746 MAP3K10 (ENSDARG00000055672) SIPA1L3 (ENSDARG00000061699) qpctla (ENSDARG00000061691) six9 (ENSDARG00000068407) six5 (ENSDARG00000068406) Clupeiformes ANCESTRAL SPECIES 127 ENSGT00940000160378.jb ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a.b ENSGT00940000159112.b ENSGT00940000159256.o ENSGT00940000175063 ENSGT00390000015077 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.b.h ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Denticle herring MODERN SPECIES 10 olfcs2 (ENSDCDG00000026613) MME (ENSDCDG00000026639) GPR149 (ENSDCDG00000027484) dhx36 (ENSDCDG00000027512) ARHGEF26 (ENSDCDG00000027902) RAP2B (ENSDCDG00000027905) P2RY1 (ENSDCDG00000027907) LGALS4 (ENSDCDG00000027910) ryr1b (ENSDCDG00000028133) rasgrp4 (ENSDCDG00000028902) HNRNPUL1 (ENSDCDG00000028908) opa3 (ENSDCDG00000028973) ppp1r13l (ENSDCDG00000028975) TMEM91 (ENSDCDG00000028981) exosc5 (ENSDCDG00000028983) bckdha (ENSDCDG00000028988) ##22 B3GNT8 (ENSDCDG00000028993) napab (ENSDCDG00000028996) BICRA (ENSDCDG00000029024) ehd2b (ENSDCDG00000029028) psmd8 (ENSDCDG00000029030) spred3 (ENSDCDG00000029032) dhx34 (ENSDCDG00000029040) st14a (ENSDCDG00000029092) aplp2 (ENSDCDG00000029127) prdm10 (ENSDCDG00000031460) cdon (ENSDCDG00000032320) bcl9l (ENSDCDG00000032351) CXCR5 (ENSDCDG00000032354) DDX6 (ENSDCDG00000032357) TREH (ENSDCDG00000032359) Atlantic herring MODERN SPECIES 25 ARHGEF17 (ENSCHAG00000003565) relt (ENSCHAG00000003472) P2RY2 (ENSCHAG00000003451) FCHSD2 (ENSCHAG00000001158) ENSCHAG00000000302 cuedc1b (ENSCHAG00000027778) ENSCHAG00000027777 MINDY4B (ENSCHAG00000027776) LGALS4 (ENSCHAG00000027774) ryr1b (ENSCHAG00000027560) rasgrp4 (ENSCHAG00000027444) opa3 (ENSCHAG00000027439) ppp1r13l (ENSCHAG00000027438) TMEM91 (ENSCHAG00000027435) exosc5 (ENSCHAG00000027431) bckdha (ENSCHAG00000027422) ##22 ENSCHAG00000027417 cfap45 (ENSCHAG00000027404) tbrg1 (ENSCHAG00000027392) siae (ENSCHAG00000027385) tada2a (ENSCHAG00000027311) dusp14 (ENSCHAG00000027289) SYNRG (ENSCHAG00000027269) hnf1ba (ENSCHAG00000027245) ENSCHAG00000027243 dynll2a (ENSCHAG00000027241) ENSCHAG00000027238 ENSCHAG00000027235 gap43 (ENSCHAG00000027231) LSAMP (ENSCHAG00000027228) ENSCHAG00000027224 Euteleosteomorpha ANCESTRAL SPECIES 7 ENSGT00390000007499 ENSGT00940000181859 ENSGT00940000158785 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000158431.a.a.a.a.b.a.c.b ENSGT00940000160330 ENSGT00940000159256.o ENSGT00940000175063 ENSGT00390000014835 ENSGT01100000263497.D ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000164481.b.b ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000014682 ENSGT00940000161445 Protacanthopterygii ANCESTRAL SPECIES 123 ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000158431.a.a.a.a.b.a.c.b ENSGT00940000160330 ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Northern pike MODERN SPECIES ppp5c (ENSELUG00000021250) tgfb1a (ENSELUG00000021267) ENSELUG00000021278 ENSELUG00000021283 ENSELUG00000021295 LGALS4 (ENSELUG00000021308) ENSELUG00000021319 LGALS4 (ENSELUG00000021363) ryr1b (ENSELUG00000021513) rasgrp4 (ENSELUG00000021643) HNRNPUL1 (ENSELUG00000021668) opa3 (ENSELUG00000021676) ppp1r13l (ENSELUG00000021688) TMEM91 (ENSELUG00000021703) exosc5 (ENSELUG00000021719) bckdha (ENSELUG00000021736) ##22 B3GNT8 (ENSELUG00000021747) napab (ENSELUG00000021793) BICRA (ENSELUG00000021865) EHD2 (ENSELUG00000021876) psmd8 (ENSELUG00000021887) spred3 (ENSELUG00000021913) dhx34 (ENSELUG00000021992) ENSELUG00000028733 ENSELUG00000022192 aplp2 (ENSELUG00000022306) prdm10 (ENSELUG00000022461) ENSELUG00000028157 ENSELUG00000027240 cdon (ENSELUG00000022556) bcl9l (ENSELUG00000022590) Salmoninae ANCESTRAL SPECIES 214 ENSGT00940000158785.q ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000174794 ENSGT00940000160232.l ENSGT00940000160378.ib ENSGT00940000160378.hb ENSGT00940000155288.b.qd ENSGT00940000155288.b.pd.b.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a.v ENSGT00940000159112.b.j ENSGT00940000159256.p ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000165538 ENSGT00940000164481.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Huchen MODERN SPECIES 3551 exosc5 (ENSHHUG00000037509) bckdha (ENSHHUG00000037466) ##22 ENSHHUG00000037464 napab (ENSHHUG00000037460) ENSHHUG00000037458 Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00940000158785.q ENSGT01070000254515 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000174794 ENSGT00940000160232.l ENSGT00940000160378.ib ENSGT00940000160378.hb ENSGT00940000155288.b.qd ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a.v ENSGT00940000159112.b.j ENSGT00940000159256.p.a ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000165538 ENSGT00940000164481.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES ENSGT00530000063174.b.e ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00530000063174.b.e ##22 Chinook salmon MODERN SPECIES 2875 ENSOTSG00005021127 ##22 Oncorhynchus ANCESTRAL SPECIES 69 ENSGT00940000165793 ENSGT00940000164630.f ENSGT00940000158785.q ENSGT01070000254515 ENSGT00940000160457.b ENSGT00940000166615 ENSGT01050000245803.a ENSGT00940000160378.hb ENSGT00940000155288.b.pd.b.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b.f ##22 ENSGT00940000161895 ENSGT00390000005826.a.a.v ENSGT00940000159112.b.j ENSGT00940000159256.p.a ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000165538 ENSGT00940000164481.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Rainbow trout MODERN SPECIES 16 ENSOMYG00000057444 ENSOMYG00000068625 ENSOMYG00000053393 ENSOMYG00000018423 ENSOMYG00000062986 ENSOMYG00000068405 ENSOMYG00000054000 ENSOMYG00000074863 rasgrp4 (ENSOMYG00000073518) ENSOMYG00000036320 opa3 (ENSOMYG00000036343) ENSOMYG00000073530 ppp1r13l (ENSOMYG00000062583) TMEM91 (ENSOMYG00000036471) exosc5 (ENSOMYG00000036460) bckdha (ENSOMYG00000036445) ##22 ENSOMYG00000064314 ENSOMYG00000068828 napab (ENSOMYG00000069694) BICRA (ENSOMYG00000077600) EHD2 (ENSOMYG00000036354) psmd8 (ENSOMYG00000036376) ENSOMYG00000061272 spred3 (ENSOMYG00000036384) ENSOMYG00000058769 dhx34 (ENSOMYG00000036408) ENSOMYG00000058426 ENSOMYG00000068378 ENSOMYG00000031242 STARD10 (ENSOMYG00000045583) ENSOMYG00000064025 Oncorhynchus_a ANCESTRAL SPECIES 75 ENSGT01100000263522.B.a ENSGT00950000182887.C.a.b ENSGT00940000153936.b ENSGT00940000165793 ENSGT00940000164630.f ENSGT00940000158785.q ENSGT00940000160457.b ENSGT00940000166615 ENSGT00940000155288.b.pd.b.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b.f ##22 ENSGT00940000161895 ENSGT00390000005826.a.a.v ENSGT00940000159112.b.j ENSGT00940000159256.p.a ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000165538 ENSGT00940000164481.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 ENSGT00390000006949.p Chinook salmon MODERN SPECIES 777 TMEM91 (ENSOTSG00005038543) exosc5 (ENSOTSG00005038595) bckdha (ENSOTSG00005038596) ##22 Coho salmon MODERN SPECIES 9 TGFB1 (ENSOKIG00005012766) ENSOKIG00005012757 AXL (ENSOKIG00005010973) ENSOKIG00005010868 LGALS4 (ENSOKIG00005010842) ENSOKIG00005033426 ENSOKIG00005033337 rasgrp4 (ENSOKIG00005033258) ENSOKIG00005032388 opa3 (ENSOKIG00005032339) ppp1r13l (ENSOKIG00005032325) ENSOKIG00005032309 ENSOKIG00005032294 ENSOKIG00005032287 napab (ENSOKIG00005032183) bckdha (ENSOKIG00005032122) ##22 BICRA (ENSOKIG00005032087) EHD2 (ENSOKIG00005032063) psmd8 (ENSOKIG00005032046) spred3 (ENSOKIG00005032025) dhx34 (ENSOKIG00005031843) ENSOKIG00005031813 ENSOKIG00005031685 aplp2 (ENSOKIG00005030899) prdm10 (ENSOKIG00005030704) ENSOKIG00005030684 ENSOKIG00005030659 bcl9l (ENSOKIG00005030529) CXCR5 (ENSOKIG00005030467) DDX6 (ENSOKIG00005029977) TREH (ENSOKIG00005029899) Salmo ANCESTRAL SPECIES 68 ENSGT00940000158785.q ENSGT01070000254515 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT01050000245803 ENSGT00940000160378.hb ENSGT00940000160232.l ENSGT00940000160378.ib ENSGT00940000155288.b.qd ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a.v ENSGT00940000159112.b.j ENSGT00940000159256.p.a ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000165538 ENSGT00940000164481.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Atlantic salmon MODERN SPECIES 28 ENSSSAG00000052752 ENSSSAG00000116391 ENSSSAG00000052708 ENSSSAG00000052699 ENSSSAG00000109438 ENSSSAG00000047172 ENSSSAG00000099604 ENSSSAG00000052663 ENSSSAG00000053578 rasgrp4 (ENSSSAG00000095450) ENSSSAG00000057300 opa3 (ENSSSAG00000085940) ppp1r13l (ENSSSAG00000107742) TMEM91 (ENSSSAG00000090827) exosc5 (ENSSSAG00000057868) bckdha (ENSSSAG00000088635) ##22 B3GNT8 (ENSSSAG00000093767) napab (ENSSSAG00000105124) BICRA (ENSSSAG00000057848) ENSSSAG00000052694 ENSSSAG00000017574 ENSSSAG00000050716 EHD2 (ENSSSAG00000109961) ENSSSAG00000091349 spred3 (ENSSSAG00000101390) ENSSSAG00000088106 ENSSSAG00000039689 ENSSSAG00000039660 st14a (ENSSSAG00000038785) ENSSSAG00000092004 prdm10 (ENSSSAG00000108043) River trout MODERN SPECIES 4 wdr62 (ENSSTUG00000005228) ENSSTUG00000005561 ppp5c (ENSSTUG00000005590) ENSSTUG00000006119 tgfb1a (ENSSTUG00000006122) ENSSTUG00000006134 ENSSTUG00000006156 ENSSTUG00000006182 ENSSTUG00000006190 LGALS4 (ENSSTUG00000006201) ENSSTUG00000006297 opa3 (ENSSTUG00000006694) ppp1r13l (ENSSTUG00000006711) TMEM91 (ENSSTUG00000006724) exosc5 (ENSSTUG00000006739) bckdha (ENSSTUG00000006753) ##22 B3GNT8 (ENSSTUG00000006787) napab (ENSSTUG00000006802) ENSSTUG00000006826 ENSSTUG00000006835 prdm10 (ENSSTUG00000006849) ENSSTUG00000007017 ENSSTUG00000007022 ENSSTUG00000007032 EHD2 (ENSSTUG00000007038) psmd8 (ENSSTUG00000007050) ENSSTUG00000007073 spred3 (ENSSTUG00000007081) dhx34 (ENSSTUG00000007095) ENSSTUG00000007177 ENSSTUG00000007183 Acanthomorphata ANCESTRAL SPECIES 8 ENSGT00940000181859 ENSGT00940000158785 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000162064 ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00670000099465 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Cod MODERN SPECIES 7 ENSGMOG00000027778 ENSGMOG00000034209 ppp1r13l (ENSGMOG00000024946) ENSGMOG00000029331 ENSGMOG00000032588 ENSGMOG00000037074 ENSGMOG00000034922 ENSGMOG00000036305 ENSGMOG00000025162 ENSGMOG00000035068 ENSGMOG00000030986 ENSGMOG00000026092 ENSGMOG00000028753 ENSGMOG00000027481 exosc5 (ENSGMOG00000015865) bckdha (ENSGMOG00000015877) ##22 B3GNT8 (ENSGMOG00000024448) ENSGMOG00000015902 ENSGMOG00000029196 ENSGMOG00000001696 ENSGMOG00000000830 ENSGMOG00000000211 ENSGMOG00000000188 ENSGMOG00000014212 ENSGMOG00000000226 ENSGMOG00000036031 ENSGMOG00000000838 ENSGMOG00000034058 ENSGMOG00000027330 ENSGMOG00000034520 ENSGMOG00000030543 Euacanthomorphacea ANCESTRAL SPECIES 8 ENSGT00940000181859 ENSGT00940000158785 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00670000099465 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Percomorphaceae ANCESTRAL SPECIES 8 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00670000099465 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Tiger tail seahorse MODERN SPECIES 517 ENSHCOG00000018325 AXL (ENSHCOG00000018285) LGALS4 (ENSHCOG00000018257) ENSHCOG00000018228 ENSHCOG00000018015 rasgrp4 (ENSHCOG00000017976) HNRNPUL1 (ENSHCOG00000017927) ENSHCOG00000017916 ENSHCOG00000017895 ENSHCOG00000017886 ENSHCOG00000017869 opa3 (ENSHCOG00000017859) ppp1r13l (ENSHCOG00000017839) TMEM91 (ENSHCOG00000017828) exosc5 (ENSHCOG00000017818) bckdha (ENSHCOG00000017812) ##22 B3GNT8 (ENSHCOG00000017779) napab (ENSHCOG00000017742) BICRA (ENSHCOG00000017690) EHD2 (ENSHCOG00000017683) nup88 (ENSHCOG00000017651) psmd8 (ENSHCOG00000017646) spred3 (ENSHCOG00000017617) dhx34 (ENSHCOG00000017578) ENSHCOG00000017485 aplp2 (ENSHCOG00000017476) ENSHCOG00000017433 coq8b (ENSHCOG00000017402) fbxo46 (ENSHCOG00000017386) si:dkey-260j18.2 (ENSHCOG00000017384) sars2 (ENSHCOG00000017362) Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00670000099465 ENSGT00940000157114 ENSGT00730000110915.a Ovalentaria ANCESTRAL SPECIES 8 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00670000099465 ENSGT00940000157114 ENSGT00730000110915.a Atherinomorphae ANCESTRAL SPECIES 15 ENSGT00530000063811.A.a.b ENSGT00560000077232.B.g.a ENSGT00940000155350.g ENSGT00940000156251.a ENSGT00950000182988.a.b.a ENSGT00530000063816.c.b ENSGT00390000010063 ENSGT00390000015655.a.m.a ENSGT00940000156648.c ENSGT00940000156155 ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00530000064411.a ENSGT00940000175310 ENSGT00940000153972.A.a ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00670000099465 ENSGT00940000157114 ENSGT00730000110915.a Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a.n ENSGT00940000155350.g ENSGT00940000156251.a ENSGT00950000182988.a.b.a ENSGT00530000063816.c.b ENSGT00390000010063 ENSGT00390000015655.a.m.a ENSGT00940000156648.c ENSGT00940000156155 ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00530000064411.a ENSGT00940000175310 ENSGT00940000153972.A.a ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00670000099465 ENSGT00940000157114 ENSGT00730000110915.a Aplocheiloidei ANCESTRAL SPECIES 8 ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Mangrove rivulus MODERN SPECIES 379 bckdha (ENSKMAG00000012587) ##22 ENSKMAG00000012570 napab (ENSKMAG00000012523) BICRA (ENSKMAG00000012479) EHD2 (ENSKMAG00000012447) psmd8 (ENSKMAG00000012384) spred3 (ENSKMAG00000012364) ENSKMAG00000012349 ENSKMAG00000012326 aplp2 (ENSKMAG00000012170) prdm10 (ENSKMAG00000012030) cdon (ENSKMAG00000011856) Turquoise killifish MODERN SPECIES 1615 RNMTL1 (ENSNFUG00015002659) glod4 (ENSNFUG00015002675) AL954372.1 (ENSNFUG00015002720) ENSNFUG00015002741 ECH1 (ENSNFUG00015002746) Nfu_g_1_000613 (ENSNFUG00015002758) med17 (ENSNFUG00015002787) ENSNFUG00015002801 EIF3K (ENSNFUG00015002816) zgc:85932 (ENSNFUG00015002834) ACTN4 (ENSNFUG00015003222) SLC8A2B (ENSNFUG00015003967) ENSNFUG00015004021 srsf7a (ENSNFUG00015004027) hnrnpl2 (ENSNFUG00015004037) BCKDHA (ENSNFUG00015004065) ##22 B3GNT2L (ENSNFUG00015004073) NAPA (ENSNFUG00015004093) BICRA (ENSNFUG00015004118) EHD2 (ENSNFUG00015004126) nup88 (ENSNFUG00015004130) PSMD8 (ENSNFUG00015004140) ENSNFUG00015004155 spred3 (ENSNFUG00015004159) DHX34 (ENSNFUG00015004177) ENSNFUG00015004240 aplp2 (ENSNFUG00015004399) ENSNFUG00015004633 CDON (ENSNFUG00015004649) BCL9L (ENSNFUG00015004686) CXCR5 (ENSNFUG00015004694) Cyprinodontoidei ANCESTRAL SPECIES 9 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00940000155350.g ENSGT00940000156251.a ENSGT00950000182988.a.b.a ENSGT00530000063816.c.b ENSGT00390000010063 ENSGT00390000015655.a.m.a ENSGT00940000156648.c ENSGT00940000156155 ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00530000064411.a ENSGT00940000175310 ENSGT00940000153972.A.a ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00670000099465 ENSGT00940000157114 ENSGT00730000110915.a NAME_4 ANCESTRAL SPECIES 54 ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00530000064411.a ENSGT00940000175310 ENSGT00940000153972.A.a ENSGT00940000161895 ENSGT00530000063174.b ##22 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Mummichog MODERN SPECIES 2250 ENSFHEG00000020277 pak4 (ENSFHEG00000020298) zgc:152863 (ENSFHEG00000020306) hif1al (ENSFHEG00000020366) DMWD (ENSFHEG00000020385) ENSFHEG00000000855 ompa (ENSFHEG00000020423) CAPN5 (ENSFHEG00000020435) ENSFHEG00000020446 ENSFHEG00000020464 panx1a (ENSFHEG00000020469) B3GNT8 (ENSFHEG00000020491) bckdha (ENSFHEG00000020505) ##22 napab (ENSFHEG00000020547) BICRA (ENSFHEG00000020585) EHD2 (ENSFHEG00000020637) nup88 (ENSFHEG00000020644) psmd8 (ENSFHEG00000020688) spred3 (ENSFHEG00000020731) dhx34 (ENSFHEG00000000517) ENSFHEG00000020805 aplp2 (ENSFHEG00000020965) prdm10 (ENSFHEG00000020991) cdon (ENSFHEG00000021083) bcl9l (ENSFHEG00000021146) CXCR5 (ENSFHEG00000021154) DDX6 (ENSFHEG00000021202) ENSFHEG00000021222 Sheepshead minnow MODERN SPECIES 418 ENSCVAG00000002343 bckdha (ENSCVAG00000002350) ##22 napab (ENSCVAG00000002363) BICRA (ENSCVAG00000002374) EHD2 (ENSCVAG00000002381) ENSCVAG00000002383 nup88 (ENSCVAG00000002390) psmd8 (ENSCVAG00000002396) spred3 (ENSCVAG00000002400) dhx34 (ENSCVAG00000002423) ENSCVAG00000002440 ENSCVAG00000002451 aplp2 (ENSCVAG00000002486) prdm10 (ENSCVAG00000002504) cdon (ENSCVAG00000002513) ENSCVAG00000002519 bcl9l (ENSCVAG00000002524) Poeciliinae ANCESTRAL SPECIES 14 ENSGT00390000008610.a.a ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00940000155350.g ENSGT00940000156251.a ENSGT00950000182988.a.b.a ENSGT00530000063816.c.b ENSGT00390000010063 ENSGT00390000015655.a.m.a ENSGT00940000156648.c ENSGT00940000156155 ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00530000064411.a ENSGT00940000153972.A.a ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00670000099465 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Poecilia ANCESTRAL SPECIES 2 ENSGT00390000008610.a.a ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00940000155350.g ENSGT00940000156251.a ENSGT00950000182988.a.b.a ENSGT00530000063816.c.b ENSGT00390000010063 ENSGT00390000015655.a.m.a ENSGT00940000156648.c ENSGT00940000156155 ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00530000064411.a ENSGT00940000153972.A.a ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00670000099465 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a NAME_6 ANCESTRAL SPECIES 14 ENSGT00390000008610.a.a ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00940000155350.g ENSGT00940000156251.a ENSGT00950000182988.a.b.a ENSGT00530000063816.c.b ENSGT00390000010063 ENSGT00390000015655.a.m.a ENSGT00940000156648.c ENSGT00940000156155 ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00530000064411.a ENSGT00940000153972.A.a ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00670000099465 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Sailfin molly MODERN SPECIES 3229 bckdha (ENSPLAG00000007071) ##22 ENSPLAG00000007074 Amazon molly MODERN SPECIES 300 rps3 (ENSPFOG00000013835) zgc:171927 (ENSPFOG00000013810) ENSPFOG00000013806 myo7aa (ENSPFOG00000013226) GDPD4 (ENSPFOG00000013040) pak1 (ENSPFOG00000012810) aqp11 (ENSPFOG00000012789) clns1a (ENSPFOG00000012765) SLC35F2 (ENSPFOG00000012711) CUL5 (ENSPFOG00000012518) dcun1d5 (ENSPFOG00000012446) ompa (ENSPFOG00000012443) CAPN5 (ENSPFOG00000012108) ENSPFOG00000012002 panx1a (ENSPFOG00000011966) bckdha (ENSPFOG00000011923) ##22 ENSPFOG00000020475 napab (ENSPFOG00000011869) BICRA (ENSPFOG00000011821) EHD2 (ENSPFOG00000011756) nup88 (ENSPFOG00000011735) psmd8 (ENSPFOG00000011698) spred3 (ENSPFOG00000011662) dhx34 (ENSPFOG00000011417) ENSPFOG00000011229 aplp2 (ENSPFOG00000011028) prdm10 (ENSPFOG00000010911) si:ch211-151h10.2 (ENSPFOG00000022601) cdon (ENSPFOG00000010721) ENSPFOG00000022780 bcl9l (ENSPFOG00000010684) Guppy MODERN SPECIES 443 trpc6a (ENSPREG00000014952) pgr (ENSPREG00000015071) ARHGAP42 (ENSPREG00000015619) cntn5 (ENSPREG00000015774) ENSPREG00000015855 FBXO40 (ENSPREG00000015880) ttc36 (ENSPREG00000015891) NECTIN1 (ENSPREG00000015911) ENSPREG00000015929 ENSPREG00000015944 TREH (ENSPREG00000015984) DDX6 (ENSPREG00000016082) CXCR5 (ENSPREG00000016128) bcl9l (ENSPREG00000016143) cdon (ENSPREG00000016175) bckdha (ENSPREG00000016245) ##22 ENSPREG00000016268 napab (ENSPREG00000016276) BICRA (ENSPREG00000016296) EHD2 (ENSPREG00000016332) nup88 (ENSPREG00000016347) psmd8 (ENSPREG00000016356) spred3 (ENSPREG00000016378) dhx34 (ENSPREG00000016403) ENSPREG00000016523 aplp2 (ENSPREG00000016991) ENSPREG00000017039 prdm10 (ENSPREG00000017058) ENSPREG00000017119 panx1a (ENSPREG00000017142) ENSPREG00000017168 Platyfish MODERN SPECIES 9 pgr (ENSXMAG00000007553) ARHGAP42 (ENSXMAG00000007558) cntn5 (ENSXMAG00000007575) FBXO40 (ENSXMAG00000028606) ttc36 (ENSXMAG00000007606) NECTIN1 (ENSXMAG00000007608) ENSXMAG00000025132 TREH (ENSXMAG00000007609) DDX6 (ENSXMAG00000007620) CXCR5 (ENSXMAG00000022083) bcl9l (ENSXMAG00000007630) cdon (ENSXMAG00000007635) ENSXMAG00000028317 ENSXMAG00000020872 ENSXMAG00000024892 bckdha (ENSXMAG00000007649) ##22 B3GNT8 (ENSXMAG00000020234) napab (ENSXMAG00000007662) BICRA (ENSXMAG00000007674) EHD2 (ENSXMAG00000029134) nup88 (ENSXMAG00000020235) psmd8 (ENSXMAG00000007685) spred3 (ENSXMAG00000024817) dhx34 (ENSXMAG00000007699) ENSXMAG00000007704 aplp2 (ENSXMAG00000007715) prdm10 (ENSXMAG00000007733) ENSXMAG00000024298 ENSXMAG00000023211 ENSXMAG00000025136 ENSXMAG00000023824 Oryzias ANCESTRAL SPECIES 8 ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00560000077232.B.g.a ENSGT00530000063811.A.a.b ENSGT00940000158512.a ENSGT00940000160308 ENSGT00390000007686.a ENSGT00940000166085 ENSGT00940000156648.c ENSGT00940000156155 ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00530000064411.a ENSGT00940000175310 ENSGT00940000153972.A.a ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Oryzias_b ANCESTRAL SPECIES 14 ENSGT00940000155350.g ENSGT00560000077232.B.g.a ENSGT00530000063811.A.a.b ENSGT00940000158512.a.i ENSGT00940000158512.a.j ENSGT00940000160308 ENSGT00390000007686.a ENSGT00940000166085 ENSGT00940000156648.c ENSGT00940000156155 ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00530000064411.a ENSGT00940000175310 ENSGT00940000153972.A.a ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Javanese ricefish MODERN SPECIES 4 myo7aa (ENSOJAG00000009540) flot2b (ENSOJAG00000008968) FAM222B (ENSOJAG00000008924) ENSOJAG00000008771 ENSOJAG00000008591 ENSOJAG00000008332 DMWD (ENSOJAG00000008302) hif1al (ENSOJAG00000007882) cul5a (ENSOJAG00000006958) dcun1d5 (ENSOJAG00000006865) ompa (ENSOJAG00000006859) CAPN5 (ENSOJAG00000005778) ENSOJAG00000005629 ENSOJAG00000005618 PANX (ENSOJAG00000005611) bckdha (ENSOJAG00000005608) ##22 ENSOJAG00000005601 napab (ENSOJAG00000005510) BICRA (ENSOJAG00000005493) EHD2 (ENSOJAG00000005485) nup88 (ENSOJAG00000005477) psmd8 (ENSOJAG00000005399) spred3 (ENSOJAG00000005386) dhx34 (ENSOJAG00000005115) aplp2 (ENSOJAG00000002858) cdon (ENSOJAG00000002378) bcl9l (ENSOJAG00000002342) CXCR5 (ENSOJAG00000002336) DDX6 (ENSOJAG00000002172) TREH (ENSOJAG00000002092) NECTIN1 (ENSOJAG00000002068) Indian medaka MODERN SPECIES 12 FAM222B (ENSOMEG00000023746) ENSOMEG00000023757 ENSOMEG00000023766 ENSOMEG00000023804 DMWD (ENSOMEG00000023807) hif1al (ENSOMEG00000001208) ENSOMEG00000001213 CUL5 (ENSOMEG00000001217) dcun1d5 (ENSOMEG00000001221) ompa (ENSOMEG00000001224) CAPN5 (ENSOMEG00000001227) ENSOMEG00000001231 panx1a (ENSOMEG00000001234) ENSOMEG00000001236 B3GNT8 (ENSOMEG00000001238) bckdha (ENSOMEG00000001242) ##22 napab (ENSOMEG00000001248) BICRA (ENSOMEG00000001255) EHD2 (ENSOMEG00000001261) ENSOMEG00000001263 nup88 (ENSOMEG00000001265) psmd8 (ENSOMEG00000001269) spred3 (ENSOMEG00000001270) dhx34 (ENSOMEG00000001279) ENSOMEG00000001283 aplp2 (ENSOMEG00000001293) prdm10 (ENSOMEG00000001310) cdon (ENSOMEG00000001330) bcl9l (ENSOMEG00000001339) CXCR5 (ENSOMEG00000001343) DDX6 (ENSOMEG00000001347) Oryzias_a ANCESTRAL SPECIES 8 ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00560000077232.B.g.a ENSGT00530000063811.A.a.b ENSGT00940000158512.a ENSGT00940000160308 ENSGT00390000007686.a ENSGT00940000166085 ENSGT00940000156648.c ENSGT00940000156155 ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00530000064411.a ENSGT00940000153972.A.a ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Japanese Medaka HdrR MODERN SPECIES 4 GDPD4 (ENSORLG00000001876) myo7aa (ENSORLG00000001941) ENSORLG00000001952 ENSORLG00000001959 ENSORLG00000029342 ENSORLG00000001987 DMWD (ENSORLG00000023682) hif1al (ENSORLG00000002004) CUL5 (ENSORLG00000002038) dcun1d5 (ENSORLG00000002056) CAPN5 (ENSORLG00000002081) ompa (ENSORLG00000029919) ENSORLG00000002117 PANX (ENSORLG00000002140) ENSORLG00000027744 bckdha (ENSORLG00000002156) ##22 B3GNT8 (ENSORLG00000002162) napab (ENSORLG00000002201) BICRA (ENSORLG00000002222) EHD2 (ENSORLG00000002244) nup88 (ENSORLG00000002248) psmd8 (ENSORLG00000002285) spred3 (ENSORLG00000002291) ENSORLG00000029561 dhx34 (ENSORLG00000002308) ENSORLG00000002334 aplp2 (ENSORLG00000002393) prdm10 (ENSORLG00000002416) cdon (ENSORLG00000002446) bcl9l (ENSORLG00000002455) CXCR5 (ENSORLG00000002476) Chinese medaka MODERN SPECIES 538 pak1 (ENSOSIG00000015442) GDPD4 (ENSOSIG00000015583) myo7aa (ENSOSIG00000015631) flot2b (ENSOSIG00000017009) FAM222B (ENSOSIG00000017014) ENSOSIG00000017028 ENSOSIG00000017144 DMWD (ENSOSIG00000017148) hif1al (ENSOSIG00000017162) cul5a (ENSOSIG00000017293) dcun1d5 (ENSOSIG00000017311) CAPN5 (ENSOSIG00000017328) ompa (ENSOSIG00000017825) ENSOSIG00000003765 panx1a (ENSOSIG00000003822) bckdha (ENSOSIG00000003900) ##22 B3GNT8 (ENSOSIG00000003905) napab (ENSOSIG00000003928) BICRA (ENSOSIG00000003966) EHD2 (ENSOSIG00000003982) nup88 (ENSOSIG00000003985) spred3 (ENSOSIG00000003991) dhx34 (ENSOSIG00000004027) ENSOSIG00000004153 aplp2 (ENSOSIG00000004355) prdm10 (ENSOSIG00000010678) Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Cichlidae ANCESTRAL SPECIES 21 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000162064.i ENSGT00940000162064.h.c ENSGT00940000162064.h.d ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Pseudocrenilabrinae ANCESTRAL SPECIES 19 ENSGT00940000159132.b ENSGT00940000162064.i ENSGT00940000162064.h.c.b ENSGT00940000162064.h.d.b ENSGT00940000162064.h.d.a ENSGT00940000160232 ENSGT00940000160378.gb ENSGT00940000160378.fb ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Pseudocrenilabrinae_A ANCESTRAL SPECIES 15 ENSGT00940000159132.b ENSGT00940000162064.i ENSGT00940000162064.h.c.b ENSGT00940000162064.h.d.b ENSGT00940000162064.h.d.a ENSGT00940000160232 ENSGT00940000160378.gb ENSGT00940000160378.fb ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Haplochromini ANCESTRAL SPECIES 15 ENSGT00940000162064.i ENSGT00940000162064.h.c.b ENSGT00940000162064.h.d.b ENSGT00940000162064.h.d.a ENSGT00940000160232 ENSGT00940000160378.gb.a.b ENSGT00940000160378.gb.a.a ENSGT00940000160378.fb ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Burton s mouthbrooder MODERN SPECIES 479 ENSHBUG00000010449 rasgrp4 (ENSHBUG00000010179) HNRNPUL1 (ENSHBUG00000010129) opa3 (ENSHBUG00000010121) ppp1r13l (ENSHBUG00000010113) TMEM91 (ENSHBUG00000010098) exosc5 (ENSHBUG00000010082) bckdha (ENSHBUG00000010051) ##22 B3GNT8 (ENSHBUG00000010023) napab (ENSHBUG00000010009) ENSHBUG00000009936 EHD2 (ENSHBUG00000009900) nup88 (ENSHBUG00000009885) psmd8 (ENSHBUG00000009865) spred3 (ENSHBUG00000009840) dhx34 (ENSHBUG00000009820) ENSHBUG00000009809 aplp2 (ENSHBUG00000009780) prdm10 (ENSHBUG00000009727) cdon (ENSHBUG00000009688) bcl9l (ENSHBUG00000009679) CXCR5 (ENSHBUG00000009665) DDX6 (ENSHBUG00000009651) Haplochromini_A ANCESTRAL SPECIES 23 ENSGT00940000162064.i ENSGT00940000162064.h.c.b ENSGT00940000162064.h.d.b ENSGT00940000162064.h.d.a ENSGT00940000160232 ENSGT00940000156258.f.a.a.b ENSGT00940000160378.gb.a.a ENSGT00940000160378.fb ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Haplochromini_B ANCESTRAL SPECIES 27 ENSGT00940000160457.b ENSGT00940000166615 ENSGT00940000162064.h.d.b ENSGT00940000162064.h.d.a ENSGT00940000160232 ENSGT00940000156258.f.a.a.b.a ENSGT00940000160378.gb.a.a ENSGT00940000160378.fb ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Eastern happy MODERN SPECIES 5 AXL (ENSACLG00000020116) ENSACLG00000020150 ENSACLG00000020383 ENSACLG00000020401 ENSACLG00000020425 LGALS4 (ENSACLG00000020454) ENSACLG00000020475 ENSACLG00000020521 rasgrp4 (ENSACLG00000020809) ENSACLG00000020855 ENSACLG00000020884 opa3 (ENSACLG00000020892) ppp1r13l (ENSACLG00000020908) TMEM91 (ENSACLG00000020929) exosc5 (ENSACLG00000020944) bckdha (ENSACLG00000020972) ##22 B3GNT8 (ENSACLG00000020997) napab (ENSACLG00000021009) EHD2 (ENSACLG00000021088) nup88 (ENSACLG00000021737) psmd8 (ENSACLG00000021751) spred3 (ENSACLG00000021780) dhx34 (ENSACLG00000021819) ENSACLG00000021854 aplp2 (ENSACLG00000021910) prdm10 (ENSACLG00000021973) cdon (ENSACLG00000022102) bcl9l (ENSACLG00000022129) CXCR5 (ENSACLG00000022147) DDX6 (ENSACLG00000022164) TREH (ENSACLG00000022243) Zebra mbuna MODERN SPECIES 1096 AXL (ENSMZEG00005024245) ENSMZEG00005024232 ENSMZEG00005024230 ENSMZEG00005024229 ENSMZEG00005024228 ENSMZEG00005024226 LGALS4 (ENSMZEG00005024224) ENSMZEG00005024215 rasgrp4 (ENSMZEG00005024210) HNRNPUL1 (ENSMZEG00005024205) opa3 (ENSMZEG00005024204) ppp1r13l (ENSMZEG00005024199) ENSMZEG00005024198 exosc5 (ENSMZEG00005024196) B3GNT8 (ENSMZEG00005024195) bckdha (ENSMZEG00005024188) ##22 napab (ENSMZEG00005024179) BICRA (ENSMZEG00005024164) EHD2 (ENSMZEG00005024162) nup88 (ENSMZEG00005024160) psmd8 (ENSMZEG00005024159) spred3 (ENSMZEG00005024156) dhx34 (ENSMZEG00005024153) ENSMZEG00005024124 aplp2 (ENSMZEG00005024117) prdm10 (ENSMZEG00005024111) cdon (ENSMZEG00005024108) bcl9l (ENSMZEG00005024105) CXCR5 (ENSMZEG00005024102) DDX6 (ENSMZEG00005024098) TREH (ENSMZEG00005024093) P. nyererei MODERN SPECIES 361 ENSPNYG00000007136 LGALS4 (ENSPNYG00000007170) ENSPNYG00000007262 rasgrp4 (ENSPNYG00000007543) HNRNPUL1 (ENSPNYG00000007583) opa3 (ENSPNYG00000007667) ppp1r13l (ENSPNYG00000007676) TMEM91 (ENSPNYG00000007696) exosc5 (ENSPNYG00000007712) bckdha (ENSPNYG00000007750) ##22 B3GNT8 (ENSPNYG00000007778) napab (ENSPNYG00000007787) ENSPNYG00000007831 EHD2 (ENSPNYG00000007864) nup88 (ENSPNYG00000007880) psmd8 (ENSPNYG00000007904) spred3 (ENSPNYG00000007926) dhx34 (ENSPNYG00000007967) ENSPNYG00000008007 aplp2 (ENSPNYG00000008063) prdm10 (ENSPNYG00000008145) cdon (ENSPNYG00000008368) bcl9l (ENSPNYG00000008494) CXCR5 (ENSPNYG00000008514) DDX6 (ENSPNYG00000008538) Lyretail cichlid MODERN SPECIES 335 ENSNBRG00000005312 LGALS4 (ENSNBRG00000004989) ENSNBRG00000004928 ENSNBRG00000004596 rasgrp4 (ENSNBRG00000004468) HNRNPUL1 (ENSNBRG00000004398) opa3 (ENSNBRG00000004385) ppp1r13l (ENSNBRG00000004377) TMEM91 (ENSNBRG00000004361) exosc5 (ENSNBRG00000004340) bckdha (ENSNBRG00000004310) ##22 B3GNT8 (ENSNBRG00000004296) napab (ENSNBRG00000004132) ENSNBRG00000004028 nup88 (ENSNBRG00000004006) psmd8 (ENSNBRG00000003976) spred3 (ENSNBRG00000003936) dhx34 (ENSNBRG00000003884) ENSNBRG00000003792 aplp2 (ENSNBRG00000003692) prdm10 (ENSNBRG00000003653) cdon (ENSNBRG00000003590) bcl9l (ENSNBRG00000003575) CXCR5 (ENSNBRG00000003562) DDX6 (ENSNBRG00000003540) DDX6 (ENSNBRG00000003507) Nile tilapia MODERN SPECIES 5 ENSONIG00000037200 ENSONIG00000005902 ENSONIG00000037244 ENSONIG00000003852 ENSONIG00000003847 AXL (ENSONIG00000003873) ENSONIG00000034241 LGALS4 (ENSONIG00000003890) ryr1b (ENSONIG00000003892) rasgrp4 (ENSONIG00000003995) HNRNPUL1 (ENSONIG00000004004) opa3 (ENSONIG00000004009) ppp1r13l (ENSONIG00000004011) TMEM91 (ENSONIG00000004015) exosc5 (ENSONIG00000037177) bckdha (ENSONIG00000004030) ##22 B3GNT8 (ENSONIG00000004036) napab (ENSONIG00000004037) ENSONIG00000004046 EHD2 (ENSONIG00000004051) nup88 (ENSONIG00000021321) psmd8 (ENSONIG00000004059) ENSONIG00000004063 spred3 (ENSONIG00000041122) ENSONIG00000030402 dhx34 (ENSONIG00000004067) ENSONIG00000004071 aplp2 (ENSONIG00000004078) prdm10 (ENSONIG00000004091) ENSONIG00000034522 ENSONIG00000033950 Midas cichlid MODERN SPECIES 97 mmp23bb (ENSACIG00000024098) zgc:92744 (ENSACIG00000024096) eif2a (ENSACIG00000024095) ENSACIG00000024093 ENSACIG00000024091 ENSACIG00000024090 AXL (ENSACIG00000024084) LGALS4 (ENSACIG00000024079) ENSACIG00000024074 rasgrp4 (ENSACIG00000024073) HNRNPUL1 (ENSACIG00000024072) opa3 (ENSACIG00000024071) ppp1r13l (ENSACIG00000024070) TMEM91 (ENSACIG00000024068) exosc5 (ENSACIG00000024067) bckdha (ENSACIG00000024066) ##22 B3GNT8 (ENSACIG00000024063) napab (ENSACIG00000024062) ENSACIG00000024056 nup88 (ENSACIG00000024055) psmd8 (ENSACIG00000024049) ENSACIG00000024043 spred3 (ENSACIG00000024042) dhx34 (ENSACIG00000024038) ENSACIG00000024021 ENSACIG00000024014 aplp2 (ENSACIG00000024011) prdm10 (ENSACIG00000024001) cdon (ENSACIG00000023995) bcl9l (ENSACIG00000023992) CXCR5 (ENSACIG00000023991) Pomacentridae ANCESTRAL SPECIES 27 ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00970000193390.c.a.b.v ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000161555.a ENSGT00940000157114 ENSGT00730000110915.a Pomacentridae_A ANCESTRAL SPECIES 32 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00970000193390.c.a.b.v ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000161555.a ENSGT00940000157114 ENSGT00730000110915.a Amphiprion ANCESTRAL SPECIES 30 ENSGT00940000166615 ENSGT00940000162064.i.a.b ENSGT00940000162064.i.a.a ENSGT00940000162064.i.b ENSGT00940000162064.h ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00970000193390.c.a.b.v ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000161555.a ENSGT00940000157114 ENSGT00730000110915.a Orange clownfish MODERN SPECIES 23 ENSAPEG00000015235 ENSAPEG00000015215 ENSAPEG00000015200 ENSAPEG00000015185 ENSAPEG00000014992 AXL (ENSAPEG00000014797) ENSAPEG00000014730 ENSAPEG00000014396 rasgrp4 (ENSAPEG00000014327) HNRNPUL1 (ENSAPEG00000014298) opa3 (ENSAPEG00000014280) ppp1r13l (ENSAPEG00000014243) TMEM91 (ENSAPEG00000014223) exosc5 (ENSAPEG00000014199) ENSAPEG00000014191 bckdha (ENSAPEG00000014162) ##22 B3GNT8 (ENSAPEG00000014130) napab (ENSAPEG00000014073) BICRA (ENSAPEG00000013986) EHD2 (ENSAPEG00000013956) ENSAPEG00000013936 nup88 (ENSAPEG00000013914) psmd8 (ENSAPEG00000013879) spred3 (ENSAPEG00000013859) spred3 (ENSAPEG00000013851) dhx34 (ENSAPEG00000013725) ENSAPEG00000013589 aplp2 (ENSAPEG00000013449) prdm10 (ENSAPEG00000013394) ENSAPEG00000013357 cdon (ENSAPEG00000013202) Clown anemonefish MODERN SPECIES 1841 AXL (ENSAOCG00000007215) LGALS4 (ENSAOCG00000007089) ENSAOCG00000007025 rasgrp4 (ENSAOCG00000006740) HNRNPUL1 (ENSAOCG00000006694) opa3 (ENSAOCG00000006679) ppp1r13l (ENSAOCG00000006665) TMEM91 (ENSAOCG00000006610) exosc5 (ENSAOCG00000006601) ENSAOCG00000006582 bckdha (ENSAOCG00000006566) ##22 B3GNT8 (ENSAOCG00000006529) napab (ENSAOCG00000006508) ENSAOCG00000000307 EHD2 (ENSAOCG00000006422) ENSAOCG00000006412 nup88 (ENSAOCG00000006396) psmd8 (ENSAOCG00000006374) spred3 (ENSAOCG00000006330) dhx34 (ENSAOCG00000006310) hikeshi (ENSAOCG00000006260) hikeshi (ENSAOCG00000006248) dhrs13a.1 (ENSAOCG00000006241) dhrs13a.1 (ENSAOCG00000006233) dhrs13a.2 (ENSAOCG00000006223) Spiny chromis MODERN SPECIES 569 ENSAPOG00000014071 ppp5c (ENSAPOG00000014039) tgfb1a (ENSAPOG00000013984) ENSAPOG00000013970 cyp2y3 (ENSAPOG00000013952) AXL (ENSAPOG00000013901) LGALS4 (ENSAPOG00000013714) ENSAPOG00000013635 rasgrp4 (ENSAPOG00000013216) HNRNPUL1 (ENSAPOG00000013078) opa3 (ENSAPOG00000012955) ppp1r13l (ENSAPOG00000012949) TMEM91 (ENSAPOG00000012932) exosc5 (ENSAPOG00000012910) ENSAPOG00000012842 bckdha (ENSAPOG00000012827) ##22 B3GNT8 (ENSAPOG00000012811) napab (ENSAPOG00000012794) BICRA (ENSAPOG00000012729) EHD2 (ENSAPOG00000012705) nup88 (ENSAPOG00000012689) psmd8 (ENSAPOG00000012663) spred3 (ENSAPOG00000012616) dhx34 (ENSAPOG00000012602) ENSAPOG00000012519 aplp2 (ENSAPOG00000012421) ENSAPOG00000012349 Bicolor damselfish MODERN SPECIES 1421 LGALS4 (ENSSPAG00000018677) ENSSPAG00000018470 rasgrp4 (ENSSPAG00000018422) HNRNPUL1 (ENSSPAG00000018378) opa3 (ENSSPAG00000018371) ppp1r13l (ENSSPAG00000018345) TMEM91 (ENSSPAG00000018333) exosc5 (ENSSPAG00000018306) ENSSPAG00000018298 bckdha (ENSSPAG00000018282) ##22 B3GNT8 (ENSSPAG00000018266) napab (ENSSPAG00000018226) BICRA (ENSSPAG00000018186) EHD2 (ENSSPAG00000018164) nup88 (ENSSPAG00000018157) psmd8 (ENSSPAG00000018132) spred3 (ENSSPAG00000018112) Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Carangaria ANCESTRAL SPECIES 8 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Carangaria_A ANCESTRAL SPECIES 10 ENSGT00940000158785 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Seriola ANCESTRAL SPECIES 38 ENSGT00940000158785 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00940000177932 ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a Yellowtail amberjack MODERN SPECIES 2952 ppp5c (ENSSLDG00000004475) tgfb1a (ENSSLDG00000004564) ENSSLDG00000004609 ENSSLDG00000004634 ENSSLDG00000004651 ENSSLDG00000004669 AXL (ENSSLDG00000004682) LGALS4 (ENSSLDG00000004714) ENSSLDG00000004741 rasgrp4 (ENSSLDG00000005048) HNRNPUL1 (ENSSLDG00000005140) opa3 (ENSSLDG00000005166) ppp1r13l (ENSSLDG00000005186) TMEM91 (ENSSLDG00000005208) exosc5 (ENSSLDG00000005218) bckdha (ENSSLDG00000005250) ##22 napab (ENSSLDG00000005299) BICRA (ENSSLDG00000005347) EHD2 (ENSSLDG00000005368) ENSSLDG00000005384 nup88 (ENSSLDG00000005395) psmd8 (ENSSLDG00000005426) spred3 (ENSSLDG00000005454) dhx34 (ENSSLDG00000005497) ENSSLDG00000005595 ENSSLDG00000005625 aplp2 (ENSSLDG00000005700) prdm10 (ENSSLDG00000005894) cdon (ENSSLDG00000005972) bcl9l (ENSSLDG00000006108) CXCR5 (ENSSLDG00000006143) Greater amberjack MODERN SPECIES 14 ppp5c (ENSSDUG00000001230) tgfb1a (ENSSDUG00000001200) ENSSDUG00000001164 ENSSDUG00000001155 ENSSDUG00000000994 ENSSDUG00000000982 AXL (ENSSDUG00000000965) LGALS4 (ENSSDUG00000000893) ENSSDUG00000000548 rasgrp4 (ENSSDUG00000000527) HNRNPUL1 (ENSSDUG00000000399) opa3 (ENSSDUG00000000385) ppp1r13l (ENSSDUG00000000375) TMEM91 (ENSSDUG00000000359) exosc5 (ENSSDUG00000000339) bckdha (ENSSDUG00000000310) ##22 B3GNT8 (ENSSDUG00000000300) napab (ENSSDUG00000000247) ENSSDUG00000000185 EHD2 (ENSSDUG00000000141) nup88 (ENSSDUG00000000062) psmd8 (ENSSDUG00000021066) spred3 (ENSSDUG00000021050) dhx34 (ENSSDUG00000021018) ENSSDUG00000021001 Barramundi perch MODERN SPECIES 109 ppp5c (ENSLCAG00010007521) tgfb1a (ENSLCAG00010007407) ENSLCAG00010007404 ENSLCAG00010007400 ENSLCAG00010007396 cyp2y3 (ENSLCAG00010007079) AXL (ENSLCAG00010006919) LGALS4 (ENSLCAG00010006902) ryr1b (ENSLCAG00010006187) rasgrp4 (ENSLCAG00010005974) HNRNPUL1 (ENSLCAG00010005959) opa3 (ENSLCAG00010005951) ppp1r13l (ENSLCAG00010005946) ENSLCAG00010005938 exosc5 (ENSLCAG00010005933) bckdha (ENSLCAG00010005922) ##22 B3GNT8 (ENSLCAG00010005914) napab (ENSLCAG00010005890) BICRA (ENSLCAG00010005865) EHD2 (ENSLCAG00010005860) nup88 (ENSLCAG00010005855) psmd8 (ENSLCAG00010005812) spred3 (ENSLCAG00010005795) dhx34 (ENSLCAG00010005789) ENSLCAG00010005774 aplp2 (ENSLCAG00010005749) prdm10 (ENSLCAG00010005463) cdon (ENSLCAG00010005399) bcl9l (ENSLCAG00010005392) CXCR5 (ENSLCAG00010005388) DDX6 (ENSLCAG00010005356) Pleuronectoidei ANCESTRAL SPECIES 35 ENSGT00940000158785 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT00900000141067 ENSGT00390000006949 Turbot MODERN SPECIES 15 ENSSMAG00000020380 ENSSMAG00000028748 ENSSMAG00000020383 ENSSMAG00000020406 ENSSMAG00000020464 ENSSMAG00000026645 ENSSMAG00000020502 ENSSMAG00000028969 ENSSMAG00000020504 ENSSMAG00000020511 ENSSMAG00000029204 tyw1 (ENSSMAG00000020514) ENSSMAG00000031798 GALNT17 (ENSSMAG00000020531) ENSSMAG00000020544 ENSSMAG00000020549 ##22 NAPA (ENSSMAG00000020551) ENSSMAG00000020556 EHD2 (ENSSMAG00000020558) ENSSMAG00000000762 psmd8 (ENSSMAG00000000789) ENSSMAG00000000793 ENSSMAG00000036643 dhx34 (ENSSMAG00000000815) ENSSMAG00000000910 ENSSMAG00000000927 prdm10 (ENSSMAG00000001125) cdon (ENSSMAG00000001222) bcl9l (ENSSMAG00000001239) ENSSMAG00000001253 TREH (ENSSMAG00000001301) Tongue sole MODERN SPECIES 14 ENSCSEG00000007503 ENSCSEG00000007487 ENSCSEG00000007477 hmgb1b (ENSCSEG00000007468) ENSCSEG00000007455 ENSCSEG00000007444 b3glcta (ENSCSEG00000007420) ENSCSEG00000007409 TRIM3 (ENSCSEG00000007337) frem2b (ENSCSEG00000007272) trpc4b (ENSCSEG00000007251) postnb (ENSCSEG00000007215) ppp1r13l (ENSCSEG00000007203) TMEM91 (ENSCSEG00000007198) exosc5 (ENSCSEG00000007190) bckdha (ENSCSEG00000007183) ##22 B3GNT8 (ENSCSEG00000007181) napab (ENSCSEG00000007171) ENSCSEG00000007160 EHD2 (ENSCSEG00000007149) nup88 (ENSCSEG00000007138) psmd8 (ENSCSEG00000007124) spred3 (ENSCSEG00000007115) dhx34 (ENSCSEG00000007100) ENSCSEG00000007064 aplp2 (ENSCSEG00000006999) prdm10 (ENSCSEG00000006954) cdon (ENSCSEG00000006906) bcl9l (ENSCSEG00000006896) ENSCSEG00000006875 TREH (ENSCSEG00000006851) Anabantaria ANCESTRAL SPECIES 9 ENSGT00940000163335 ENSGT00940000158785 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Zig-zag eel MODERN SPECIES 4 ppp5c (ENSMAMG00000015276) ENSMAMG00000015263 ENSMAMG00000015237 ENSMAMG00000028447 ENSMAMG00000014850 ENSMAMG00000028238 ENSMAMG00000014817 ENSMAMG00000014740 ryr1b (ENSMAMG00000014480) rasgrp4 (ENSMAMG00000014433) ENSMAMG00000014383 opa3 (ENSMAMG00000014366) ppp1r13l (ENSMAMG00000014349) TMEM91 (ENSMAMG00000014339) exosc5 (ENSMAMG00000027538) bckdha (ENSMAMG00000014291) ##22 B3GNT8 (ENSMAMG00000014275) napab (ENSMAMG00000014239) ENSMAMG00000014214 EHD2 (ENSMAMG00000014192) ENSMAMG00000028258 psmd8 (ENSMAMG00000025760) ENSMAMG00000014118 ENSMAMG00000026315 dhx34 (ENSMAMG00000014106) ENSMAMG00000014075 ENSMAMG00000013974 prdm10 (ENSMAMG00000013887) cdon (ENSMAMG00000013859) bcl9l (ENSMAMG00000013830) CXCR5 (ENSMAMG00000013853) Anabantoidei ANCESTRAL SPECIES 14 ENSGT00940000158785 ENSGT00940000160457.b ENSGT00940000166615 ENSGT00940000162064.h ENSGT00940000162064.i ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Climbing perch MODERN SPECIES 4 ENSATEG00000007436 ENSATEG00000007440 ENSATEG00000007765 ENSATEG00000008005 ENSATEG00000008227 ENSATEG00000008244 ENSATEG00000008270 ENSATEG00000029082 ryr1b (ENSATEG00000008379) rasgrp4 (ENSATEG00000008725) ENSATEG00000008814 opa3 (ENSATEG00000025858) ppp1r13l (ENSATEG00000008851) TMEM91 (ENSATEG00000008873) exosc5 (ENSATEG00000008886) bckdha (ENSATEG00000029863) ##22 B3GNT8 (ENSATEG00000008936) napab (ENSATEG00000008946) ENSATEG00000008981 EHD2 (ENSATEG00000009021) ENSATEG00000027661 psmd8 (ENSATEG00000009055) ENSATEG00000025393 dhx34 (ENSATEG00000009105) ENSATEG00000009225 ENSATEG00000009259 prdm10 (ENSATEG00000009356) cdon (ENSATEG00000009445) bcl9l (ENSATEG00000009628) CXCR5 (ENSATEG00000009676) DDX6 (ENSATEG00000009693) Siamese fighting fish MODERN SPECIES 4 ENSBSLG00000026692 ENSBSLG00000026691 ppp5c (ENSBSLG00000026690) tgfb1a (ENSBSLG00000026689) ENSBSLG00000026688 ENSBSLG00000026687 ENSBSLG00000026686 ENSBSLG00000026685 ENSBSLG00000026684 rasgrp4 (ENSBSLG00000026682) HNRNPUL1 (ENSBSLG00000026681) opa3 (ENSBSLG00000026680) ppp1r13l (ENSBSLG00000026679) TMEM91 (ENSBSLG00000026678) exosc5 (ENSBSLG00000026677) bckdha (ENSBSLG00000026676) ##22 B3GNT8 (ENSBSLG00000026675) napab (ENSBSLG00000026674) BICRA (ENSBSLG00000026673) EHD2 (ENSBSLG00000026672) nup88 (ENSBSLG00000026671) psmd8 (ENSBSLG00000026670) ENSBSLG00000026669 ENSBSLG00000026668 dhx34 (ENSBSLG00000026667) ENSBSLG00000026666 aplp2 (ENSBSLG00000026665) prdm10 (ENSBSLG00000026664) cdon (ENSBSLG00000026662) bcl9l (ENSBSLG00000026661) CXCR5 (ENSBSLG00000026660) Eupercaria ANCESTRAL SPECIES 7 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Tetraodontidae ANCESTRAL SPECIES 10 ENSGT01050000244827.C.c.a.b ENSGT00940000154934.B.lb ENSGT00940000154956.sb.a ENSGT00390000012235.k ENSGT00530000063860.b.c ENSGT01060000248594.e.b.a ENSGT00940000155313.g.b ENSGT00940000158173.f ENSGT00940000155128.a.a.a.a ENSGT00950000183040.A.a.c.a ENSGT00940000163671.a.a.b ENSGT00390000014210 ENSGT01010000222559 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Tetraodon MODERN SPECIES 8 ENSTNIG00000016266 dclk1b (ENSTNIG00000016267) spartb (ENSTNIG00000016268) postnb (ENSTNIG00000016269) trpc4b (ENSTNIG00000016270) frem2b (ENSTNIG00000016271) TRIM3 (ENSTNIG00000016272) ENSTNIG00000016273 ENSTNIG00000016274 arfip2a (ENSTNIG00000016275) ENSTNIG00000016276 urb1 (ENSTNIG00000016277) ENSTNIG00000016278 ppp1r13l (ENSTNIG00000016279) exosc5 (ENSTNIG00000000238) bckdha (ENSTNIG00000016280) ##22 B3GNT8 (ENSTNIG00000016281) napab (ENSTNIG00000016282) BICRA (ENSTNIG00000016283) EHD2 (ENSTNIG00000016284) psmd8 (ENSTNIG00000016286) spred3 (ENSTNIG00000016287) dhx34 (ENSTNIG00000016288) ENSTNIG00000016289 aplp2 (ENSTNIG00000016290) prdm10 (ENSTNIG00000016291) cdon (ENSTNIG00000016292) bcl9l (ENSTNIG00000016293) CXCR5 (ENSTNIG00000016294) DDX6 (ENSTNIG00000016295) TREH (ENSTNIG00000016296) Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Ballan wrasse MODERN SPECIES 325 ppp5c (ENSLBEG00000017243) tgfb1a (ENSLBEG00000017295) ENSLBEG00000017346 ENSLBEG00000017434 ENSLBEG00000017543 ENSLBEG00000017581 AXL (ENSLBEG00000017604) LGALS4 (ENSLBEG00000017655) ENSLBEG00000017765 rasgrp4 (ENSLBEG00000018003) HNRNPUL1 (ENSLBEG00000018092) opa3 (ENSLBEG00000018155) ppp1r13l (ENSLBEG00000018172) TMEM91 (ENSLBEG00000018200) exosc5 (ENSLBEG00000018216) bckdha (ENSLBEG00000018234) ##22 B3GNT8 (ENSLBEG00000018247) napab (ENSLBEG00000018273) BICRA (ENSLBEG00000018311) EHD2 (ENSLBEG00000018343) nup88 (ENSLBEG00000018359) psmd8 (ENSLBEG00000018382) spred3 (ENSLBEG00000018405) dhx34 (ENSLBEG00000018430) ENSLBEG00000018480 aplp2 (ENSLBEG00000018530) prdm10 (ENSLBEG00000018609) cdon (ENSLBEG00000018745) Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000162064.i ENSGT00940000166615 ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Perciformes ANCESTRAL SPECIES 10 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000162064.i ENSGT00940000166615 ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Cottioidei ANCESTRAL SPECIES 4 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000162064.i ENSGT00940000166615 ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Lumpfish MODERN SPECIES 4 ENSCLMG00005011842 ppp5c (ENSCLMG00005011797) tgfb1a (ENSCLMG00005011794) ENSCLMG00005011791 ENSCLMG00005011790 ENSCLMG00005010972 ENSCLMG00005010971 AXL (ENSCLMG00005010942) LGALS4 (ENSCLMG00005010933) rasgrp4 (ENSCLMG00005010562) HNRNPUL1 (ENSCLMG00005009617) opa3 (ENSCLMG00005009613) ppp1r13l (ENSCLMG00005009612) TMEM91 (ENSCLMG00005009611) exosc5 (ENSCLMG00005009610) bckdha (ENSCLMG00005009609) ##22 B3GNT8 (ENSCLMG00005009608) napab (ENSCLMG00005009523) BICRA (ENSCLMG00005009514) EHD2 (ENSCLMG00005009506) nup88 (ENSCLMG00005009504) psmd8 (ENSCLMG00005009493) ENSCLMG00005009490 ENSCLMG00005009489 dhx34 (ENSCLMG00005009481) ENSCLMG00005009474 aplp2 (ENSCLMG00005005858) prdm10 (ENSCLMG00005005792) cdon (ENSCLMG00005005790) bcl9l (ENSCLMG00005005788) CXCR5 (ENSCLMG00005005787) Stickleback MODERN SPECIES ENSGACG00000012756 ppp5c (ENSGACG00000012759) tgfb1a (ENSGACG00000012798) ENSGACG00000012821 cyp2y3 (ENSGACG00000012840) ENSGACG00000012904 AXL (ENSGACG00000012909) LGALS4 (ENSGACG00000012917) ENSGACG00000012940 rasgrp4 (ENSGACG00000012966) HNRNPUL1 (ENSGACG00000012973) opa3 (ENSGACG00000012981) ppp1r13l (ENSGACG00000012983) TMEM91 (ENSGACG00000012985) exosc5 (ENSGACG00000012986) bckdha (ENSGACG00000012993) ##22 napab (ENSGACG00000013006) BICRA (ENSGACG00000013015) EHD2 (ENSGACG00000013023) nup88 (ENSGACG00000013042) psmd8 (ENSGACG00000013044) spred3 (ENSGACG00000013083) dhx34 (ENSGACG00000013085) ENSGACG00000013091 aplp2 (ENSGACG00000013115) ACTN4 (ENSGACG00000013140) zgc:85932 (ENSGACG00000013147) eif3k (ENSGACG00000013152) MAP4K1 (ENSGACG00000013172) DMWD (ENSGACG00000013178) hif1al (ENSGACG00000013185) Perciformes_a ANCESTRAL SPECIES 9 ENSGT00940000181859 ENSGT00940000158785 ENSGT00940000160457.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Channel bull blenny MODERN SPECIES 4 ENSCGOG00000016859 GCGR (ENSCGOG00000016820) ENSCGOG00000016814 ppp5c (ENSCGOG00000015923) tgfb1a (ENSCGOG00000015903) ENSCGOG00000015897 ENSCGOG00000015731 ENSCGOG00000015056 AXL (ENSCGOG00000014768) LGALS4 (ENSCGOG00000014756) ENSCGOG00000013336 rasgrp4 (ENSCGOG00000013171) HNRNPUL1 (ENSCGOG00000012997) opa3 (ENSCGOG00000012986) ppp1r13l (ENSCGOG00000012983) bckdha (ENSCGOG00000012883) ##22 ENSCGOG00000012879 napab (ENSCGOG00000011743) BICRA (ENSCGOG00000011718) EHD2 (ENSCGOG00000011706) nup88 (ENSCGOG00000011703) psmd8 (ENSCGOG00000011548) spred3 (ENSCGOG00000011541) dhx34 (ENSCGOG00000011508) ENSCGOG00000011429 aplp2 (ENSCGOG00000009680) prdm10 (ENSCGOG00000009037) cdon (ENSCGOG00000008853) NECTIN1 (ENSCGOG00000008841) ttc36 (ENSCGOG00000008838) FBXO40 (ENSCGOG00000008826) Pike perch MODERN SPECIES 70 ENSSLUG00000011996 ENSSLUG00000012005 ENSSLUG00000012025 TREH (ENSSLUG00000012032) DDX6 (ENSSLUG00000012055) CXCR5 (ENSSLUG00000012102) bcl9l (ENSSLUG00000012105) cdon (ENSSLUG00000012117) prdm10 (ENSSLUG00000012158) aplp2 (ENSSLUG00000012308) ENSSLUG00000016157 dhx34 (ENSSLUG00000016200) spred3 (ENSSLUG00000016235) ENSSLUG00000016242 ENSSLUG00000016248 bckdha (ENSSLUG00000016257) ##22 ENSSLUG00000016281 napab (ENSSLUG00000016307) EHD2 (ENSSLUG00000016378) nup88 (ENSSLUG00000016385) psmd8 (ENSSLUG00000016390) BET1L (ENSSLUG00000016407) exosc5 (ENSSLUG00000016413) ppp1r13l (ENSSLUG00000016420) lhx1a (ENSSLUG00000016427) dhrs13a.3 (ENSSLUG00000016447) ENSSLUG00000016453 ENSSLUG00000016465 ENSSLUG00000016469 ENSSLUG00000016482 akap1b (ENSSLUG00000016497) Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Gilthead seabream MODERN SPECIES 11 ENSSAUG00010017567 ENSSAUG00010017615 ENSSAUG00010017623 ENSSAUG00010017629 ENSSAUG00010017647 AXL (ENSSAUG00010017657) LGALS4 (ENSSAUG00010018411) ryr1b (ENSSAUG00010018507) rasgrp4 (ENSSAUG00010019800) HNRNPUL1 (ENSSAUG00010021019) opa3 (ENSSAUG00010021611) ppp1r13l (ENSSAUG00010021613) TMEM91 (ENSSAUG00010021617) exosc5 (ENSSAUG00010021621) ENSSAUG00010021626 bckdha (ENSSAUG00010021628) ##22 B3GNT8 (ENSSAUG00010021629) napab (ENSSAUG00010021632) ENSSAUG00010021643 EHD2 (ENSSAUG00010021645) nup88 (ENSSAUG00010021646) psmd8 (ENSSAUG00010021649) spred3 (ENSSAUG00010021651) dhx34 (ENSSAUG00010021659) ENSSAUG00010021673 aplp2 (ENSSAUG00010021698) prdm10 (ENSSAUG00010021777) cdon (ENSSAUG00010021883) bcl9l (ENSSAUG00010021884) CXCR5 (ENSSAUG00010021885) DDX6 (ENSSAUG00010021892) Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00940000160457.b ENSGT00940000159132.b ENSGT00940000166615 ENSGT00940000162064.i ENSGT00940000162064.h ENSGT00940000174794 ENSGT00940000160232 ENSGT00940000160378 ENSGT00940000155288.b ENSGT00940000159883 ENSGT00940000157823 ENSGT00390000009795 ENSGT00940000160551 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000005826.a.a ENSGT00940000159112.b ENSGT00940000159256.p ENSGT00390000015063 ENSGT00390000014682 ENSGT00940000161445 ENSGT00940000158721 ENSGT00940000164481.b.a ENSGT00530000063252.a.a ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 Large yellow croaker MODERN SPECIES 479 ENSLCRG00005014579 ENSLCRG00005014580 diabloa (ENSLCRG00005014582) ENSLCRG00005014583 P4HA3 (ENSLCRG00005014584) C2CD3 (ENSLCRG00005014867) ENSLCRG00005014869 camkk1b (ENSLCRG00005014877) YWHAG (ENSLCRG00005015201) ENSLCRG00005015203 ca4b (ENSLCRG00005015204) dhrs11b.1 (ENSLCRG00005015205) ENSLCRG00005015206 zgc:174895 (ENSLCRG00005015207) rab34a (ENSLCRG00005015211) bckdha (ENSLCRG00005015220) ##22 ENSLCRG00005015224 napab (ENSLCRG00005015225) napab (ENSLCRG00005015286) BICRA (ENSLCRG00005015382) EHD2 (ENSLCRG00005015386) nup88 (ENSLCRG00005015388) psmd8 (ENSLCRG00005015390) ENSLCRG00005015392 spred3 (ENSLCRG00005015410) dhx34 (ENSLCRG00005015411) ENSLCRG00005015424 aplp2 (ENSLCRG00005016083) prdm10 (ENSLCRG00005017648) cdon (ENSLCRG00005017653) bcl9l (ENSLCRG00005017655) Pinecone sodierfish MODERN SPECIES 4 tgfb1a (ENSMMDG00005012749) ENSMMDG00005012656 ENSMMDG00005011279 ENSMMDG00005010323 ENSMMDG00005009735 AXL (ENSMMDG00005009710) LGALS4 (ENSMMDG00005009703) ENSMMDG00005009643 ENSMMDG00005009610 rasgrp4 (ENSMMDG00005009596) HNRNPUL1 (ENSMMDG00005006672) opa3 (ENSMMDG00005006613) ppp1r13l (ENSMMDG00005006609) TMEM91 (ENSMMDG00005006603) exosc5 (ENSMMDG00005006601) bckdha (ENSMMDG00005006599) ##22 B3GNT8 (ENSMMDG00005006596) napab (ENSMMDG00005006579) BICRA (ENSMMDG00005006573) EHD2 (ENSMMDG00005006568) nup88 (ENSMMDG00005006565) psmd8 (ENSMMDG00005006562) ENSMMDG00005006558 dhx34 (ENSMMDG00005006543) ENSMMDG00005006534 ENSMMDG00005006500 aplp2 (ENSMMDG00005004979) ENSMMDG00005004946 prdm10 (ENSMMDG00005004907) cdon (ENSMMDG00005004659) bcl9l (ENSMMDG00005004639) Sarcopterygii ANCESTRAL SPECIES 65 ENSGT00950000182767.b.a.b.b.b ENSGT00940000165900 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000160232 ENSGT00940000155454 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00530000063174.b ##22 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT01030000234640 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00390000014139 ENSGT00390000014682 Coelacanth MODERN SPECIES 239 ACTMAP (ENSLACG00000017716) SNRPA (ENSLACG00000017723) MIA (ENSLACG00000017735) rhoub (ENSLACG00000017751) RAB4B (ENSLACG00000017873) EGLN2 (ENSLACG00000017899) AXL (ENSLACG00000017950) ENSLACG00000018021 ENSLACG00000018030 HNRNPUL1 (ENSLACG00000018039) CCDC97 (ENSLACG00000018063) ENSLACG00000018146 B9D2 (ENSLACG00000018182) TMEM91 (ENSLACG00000018215) EXOSC5 (ENSLACG00000018233) BCKDHA (ENSLACG00000018245) ##22 B3GNT8 (ENSLACG00000018264) DMAC2 (ENSLACG00000018274) ENSLACG00000018281 psma6l (ENSLACG00000018292) NFKBIB (ENSLACG00000018297) gjd1a (ENSLACG00000018310) NOP53 (ENSLACG00000018320) ENSLACG00000018332 ENSLACG00000018349 ENSLACG00000018375 SARS2 (ENSLACG00000018385) MRPS12 (ENSLACG00000018393) ENSLACG00000018422 ENSLACG00000022259 NCCRP1 (ENSLACG00000018440) Tetrapoda ANCESTRAL SPECIES 37 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162064.c.b ENSGT00940000179890 ENSGT00940000162064.d ENSGT00940000155736.D ENSGT00940000162064.c.a ENSGT00940000160232 ENSGT00940000155454 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT00940000171204 ENSGT01100000263504.a.b.a.a ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000161901 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a Amniota ANCESTRAL SPECIES 34 ENSGT00940000165900 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162064.c.a.b ENSGT00940000155736.D ENSGT00940000162064.c.a.a.a.a ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT01090000260005.a.b.a.b.b ENSGT00940000161069 ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000161901 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a ENSGT00390000002548 Mammalia ANCESTRAL SPECIES 48 ENSGT00390000007046.b.a.b ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000155736.D ENSGT00940000162064.c.a.a.b ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT00940000161069 ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00990000206928 ENSGT00390000014139 Theria ANCESTRAL SPECIES 27 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117 ENSGT00940000161670 ENSGT00940000157162 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT00940000161069 ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h Eutheria ANCESTRAL SPECIES 28 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000157162.c.b ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 Atlantogenata ANCESTRAL SPECIES 31 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000161658 ENSGT00940000161670 ENSGT00940000154117.d ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 Xenarthra ANCESTRAL SPECIES 440 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000006319 Sloth MODERN SPECIES 3473 ENSCHOG00000009298 ##22 Armadillo MODERN SPECIES 4064 CYP2B6 (ENSDNOG00000031317) ENSDNOG00000025424 AXL (ENSDNOG00000039260) HNRNPUL1 (ENSDNOG00000035016) CCDC97 (ENSDNOG00000045140) TGFB1 (ENSDNOG00000048801) B9D2 (ENSDNOG00000017673) EXOSC5 (ENSDNOG00000017137) BCKDHA (ENSDNOG00000043905) ##22 B3GNT8 (ENSDNOG00000040478) ERICH4 (ENSDNOG00000035149) ENSDNOG00000024957 Afrotheria ANCESTRAL SPECIES 77 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000161658 ENSGT00940000161670 ENSGT00940000154117.d ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000160500 ENSGT00390000006319 Afrotheria_a ANCESTRAL SPECIES 76 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000161658 ENSGT00940000161670 ENSGT00940000154117.d ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000160500 ENSGT00390000006319 Hyrax MODERN SPECIES 7381 TMEM91 (ENSPCAG00000018777) EXOSC5 (ENSPCAG00000005946) BCKDHA (ENSPCAG00000005870) ##22 DMAC2 (ENSPCAG00000006054) ERICH4 (ENSPCAG00000006098) Elephant MODERN SPECIES 635 EGLN2 (ENSLAFG00000025776) ENSLAFG00000032062 ENSLAFG00000030541 ENSLAFG00000026862 ENSLAFG00000007666 ENSLAFG00000028408 ENSLAFG00000027100 ENSLAFG00000013189 ENSLAFG00000025967 AXL (ENSLAFG00000017496) HNRNPUL1 (ENSLAFG00000016754) CCDC97 (ENSLAFG00000029556) TGFB1 (ENSLAFG00000007672) B9D2 (ENSLAFG00000031841) EXOSC5 (ENSLAFG00000013753) BCKDHA (ENSLAFG00000021777) ##22 DMAC2 (ENSLAFG00000023287) ERICH4 (ENSLAFG00000022533) Boreoeutheria ANCESTRAL SPECIES 5 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000157162.c.b ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT00730000111056 ENSGT00990000204044 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 ENSGT00390000008714.b Laurasiatheria ANCESTRAL SPECIES 5 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.a.c.a ENSGT00390000002861 ENSGT00730000111056 ENSGT00990000204044 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Eulipotyphla ANCESTRAL SPECIES ENSGT00530000063174.b ##22 Common shrew MODERN SPECIES 2970 ENSSARG00000014283 ##22 Hedgehog MODERN SPECIES 3926 BCKDHA (ENSEEUG00000015075) ##22 Laurasiatheria_a ANCESTRAL SPECIES 5 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01030000237327 ENSGT00940000171483 ENSGT00730000111056 ENSGT00990000204044 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00910000148701 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 Laurasiatheria_b ANCESTRAL SPECIES 5 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.a.b.b.a ENSGT01030000237327 ENSGT00940000171483 ENSGT00730000111056 ENSGT00980000198994 ENSGT00990000204044 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00910000148701 ENSGT00950000183199.a.b Carnivora ANCESTRAL SPECIES 2 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.a.b.a.b ENSGT00390000002861 ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Caniformia ANCESTRAL SPECIES 1 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d.v.a.a ENSGT00940000154117.d.v.a.b ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.a.b.a.b.b ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 ENSGT00940000160476 ENSGT00940000158852 ENSGT00940000161799 ENSGT00940000160115 Caniformia_b ANCESTRAL SPECIES 2 ENSGT00940000162522 ENSGT00940000154117.d.v.b ENSGT00940000154117.d.v.a.a ENSGT00940000154117.d.v.a.b ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.a.b.b.a ENSGT00390000002861 ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Ursidae ANCESTRAL SPECIES 8 ENSGT00940000162522 ENSGT00940000154117.d.w ENSGT00940000154117.d.v.a.a ENSGT00940000154117.d.v.a.b.a ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.a.b.b.a.b Ursus ANCESTRAL SPECIES 219 ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.a.b.b.a.b Polar bear MODERN SPECIES 294 ENSUMAG00000005991 CYP2B6 (ENSUMAG00000005934) CYP2S1 (ENSUMAG00000005925) AXL (ENSUMAG00000005917) HNRNPUL1 (ENSUMAG00000005722) CCDC97 (ENSUMAG00000005669) ENSUMAG00000005666 B9D2 (ENSUMAG00000005664) TMEM91 (ENSUMAG00000005663) EXOSC5 (ENSUMAG00000005660) BCKDHA (ENSUMAG00000005656) ##22 DMAC2 (ENSUMAG00000005653) ERICH4 (ENSUMAG00000005652) ENSUMAG00000005625 American black bear MODERN SPECIES 266 ENSUAMG00000010682 AXL (ENSUAMG00000010248) ENSUAMG00000010118 CCDC97 (ENSUAMG00000010114) TGFB1 (ENSUAMG00000010110) B9D2 (ENSUAMG00000010107) TMEM91 (ENSUAMG00000010105) EXOSC5 (ENSUAMG00000010104) BCKDHA (ENSUAMG00000010102) ##22 B3GNT8 (ENSUAMG00000010100) DMAC2 (ENSUAMG00000010097) ERICH4 (ENSUAMG00000010095) Giant Panda MODERN SPECIES 3 ENSAMEG00000027756 ENSAMEG00000024790 ENSAMEG00000011960 ENSAMEG00000011857 ENSAMEG00000030154 ENSAMEG00000011824 ENSAMEG00000011816 AXL (ENSAMEG00000011737) HNRNPUL1 (ENSAMEG00000011681) CCDC97 (ENSAMEG00000011675) TGFB1 (ENSAMEG00000011645) B9D2 (ENSAMEG00000024862) ENSAMEG00000011640 ENSAMEG00000011623 B3GNT8 (ENSAMEG00000020086) BCKDHA (ENSAMEG00000011602) ##22 ENSAMEG00000011590 ENSAMEG00000011588 ENSAMEG00000004164 KCNN4 (ENSAMEG00000004174) SMG9 (ENSAMEG00000004211) IRGC (ENSAMEG00000004232) PLAUR (ENSAMEG00000004240) CADM4 (ENSAMEG00000004262) SRRM5 (ENSAMEG00000024436) ZNF576 (ENSAMEG00000020254) IRGQ (ENSAMEG00000025509) PINLYP (ENSAMEG00000004300) XRCC1 (ENSAMEG00000004315) ZNF575 (ENSAMEG00000030673) ETHE1 (ENSAMEG00000004309) Mustelinae ANCESTRAL SPECIES 53 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d.v.b ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.a.b.a.b.b.d ENSGT00390000002861 ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000163154.A.a.a American mink MODERN SPECIES 164 EGLN2 (ENSNVIG00000011900) ENSNVIG00000011955 CP2F1 (ENSNVIG00000012144) ENSNVIG00000012177 ENSNVIG00000012242 ENSNVIG00000012266 ENSNVIG00000012525 CYP2S1 (ENSNVIG00000012534) AXL (ENSNVIG00000012551) HNRNPUL1 (ENSNVIG00000012616) CCDC97 (ENSNVIG00000012713) TGFB1 (ENSNVIG00000012723) B9D2 (ENSNVIG00000012730) TMEM91 (ENSNVIG00000012748) EXOSC5 (ENSNVIG00000012781) BCKDHA (ENSNVIG00000012794) ##22 B3GNT8 (ENSNVIG00000012807) DMAC2 (ENSNVIG00000012825) ERICH4 (ENSNVIG00000012851) ENSNVIG00000012895 CXCL17 (ENSNVIG00000012973) ENSNVIG00000012986 LIPE (ENSNVIG00000012991) CNFN (ENSNVIG00000012999) ENSNVIG00000013013 MZF1 (ENSNVIG00000013018) UBE2M (ENSNVIG00000013048) CHMP2A (ENSNVIG00000013071) TRIM28 (ENSNVIG00000013091) ZBTB45 (ENSNVIG00000013155) SLC27A5 (ENSNVIG00000013163) Ferret MODERN SPECIES 390 ENSMPUG00000017674 CYP2F1 (ENSMPUG00000017672) EGLN2 (ENSMPUG00000017671) ENSMPUG00000017659 ENSMPUG00000017658 CYP2B6 (ENSMPUG00000017657) CYP2S1 (ENSMPUG00000017656) AXL (ENSMPUG00000017655) HNRNPUL1 (ENSMPUG00000017654) CCDC97 (ENSMPUG00000017653) TGFB1 (ENSMPUG00000017652) B9D2 (ENSMPUG00000017651) TMEM91 (ENSMPUG00000017650) EXOSC5 (ENSMPUG00000017649) B3GNT8 (ENSMPUG00000019039) BCKDHA (ENSMPUG00000017648) ##22 DMAC2 (ENSMPUG00000017647) Canidae ANCESTRAL SPECIES 5 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d.v.a.a ENSGT00940000154117.d.v.a.b ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.a.b.a.b.b.b.a.b ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 ENSGT00940000160476 ENSGT00940000158852 ENSGT00940000161799 ENSGT00940000160115 Canis_lupus ANCESTRAL SPECIES ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d.v.a.a ENSGT00940000154117.d.v.a.b ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.a.b.a.b.b.b.a.b ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.a ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 ENSGT00940000160476 ENSGT00940000158852 ENSGT00940000161799 ENSGT00940000160115 Dingo MODERN SPECIES 125 RAB4B (ENSCAFG00020014861) EGLN2 (ENSCAFG00020014848) ENSCAFG00020014844 CYP2F1 (ENSCAFG00020014841) ENSCAFG00020014826 ENSCAFG00020014808 ENSCAFG00020014805 ENSCAFG00020014803 ENSCAFG00020014802 AXL (ENSCAFG00020014800) HNRNPUL1 (ENSCAFG00020014782) CCDC97 (ENSCAFG00020014778) TGFB1 (ENSCAFG00020014777) B9D2 (ENSCAFG00020014774) EXOSC5 (ENSCAFG00020014770) BCKDHA (ENSCAFG00020014768) ##22 B3GNT8 (ENSCAFG00020014767) DMAC2 (ENSCAFG00020014766) ERICH4 (ENSCAFG00020014765) ENSCAFG00020014727 LYPD4 (ENSCAFG00020014716) DMRTC2 (ENSCAFG00020014713) ENSCAFG00020014712 CD79A (ENSCAFG00020014709) ARHGEF1 (ENSCAFG00020014703) ENSCAFG00020014701 RABAC1 (ENSCAFG00020014693) ATP1A3 (ENSCAFG00020014636) GRIK5 (ENSCAFG00020014562) ZNF574 (ENSCAFG00020014558) POU2F2 (ENSCAFG00020014519) Dog MODERN SPECIES EGLN2 (ENSCAFG00845002985) ENSCAFG00845002959 CYP2F1 (ENSCAFG00845002936) CYP2A13 (ENSCAFG00845002875) CYP2A7 (ENSCAFG00845002826) ENSCAFG00845002802 ENSCAFG00845002785 CYP2B6 (ENSCAFG00845002728) ENSCAFG00845002678 AXL (ENSCAFG00845002569) HNRNPUL1 (ENSCAFG00845002469) CCDC97 (ENSCAFG00845002438) TGFB1 (ENSCAFG00845002395) EXOSC5 (ENSCAFG00845002337) B3GNT8 (ENSCAFG00845002318) TMEM91 (ENSCAFG00845002258) ##22 DMAC2 (ENSCAFG00845002182) ERICH4 (ENSCAFG00845002158) ENSCAFG00845002010 LYPD4 (ENSCAFG00845001833) DMRTC2 (ENSCAFG00845001796) RPS19 (ENSCAFG00845001758) CD79A (ENSCAFG00845001724) ARHGEF1 (ENSCAFG00845001568) ERFL (ENSCAFG00845001434) RABAC1 (ENSCAFG00845001408) ATP1A3 (ENSCAFG00845001235) GRIK5 (ENSCAFG00845001140) ZNF574 (ENSCAFG00845001108) POU2F2 (ENSCAFG00845000999) DEDD2 (ENSCAFG00845000934) Red fox MODERN SPECIES 80 RAB4B (ENSVVUG00000005642) EGLN2 (ENSVVUG00000005631) ENSVVUG00000005609 CYP2F1 (ENSVVUG00000005601) ENSVVUG00000005593 ENSVVUG00000005439 ENSVVUG00000005428 CYP2B6 (ENSVVUG00000005424) ENSVVUG00000005418 AXL (ENSVVUG00000005397) HNRNPUL1 (ENSVVUG00000005386) CCDC97 (ENSVVUG00000005382) TGFB1 (ENSVVUG00000005371) ENSVVUG00000005363 EXOSC5 (ENSVVUG00000005320) BCKDHA (ENSVVUG00000005314) ##22 B3GNT8 (ENSVVUG00000005313) DMAC2 (ENSVVUG00000005245) ERICH4 (ENSVVUG00000005238) Felidae ANCESTRAL SPECIES 7 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d.x.a ENSGT00940000154117.d.x.b ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.a.b.a.b.d ENSGT00390000002861 ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b.n ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Panthera ANCESTRAL SPECIES 20 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.a.b.a.b.d ENSGT00390000002861 ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b.n ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Tiger MODERN SPECIES 246 CYP2S1 (ENSPTIG00000002172) AXL (ENSPTIG00000004013) HNRNPUL1 (ENSPTIG00000009525) CCDC97 (ENSPTIG00000013067) TGFB1 (ENSPTIG00000013742) B9D2 (ENSPTIG00000014481) TMEM91 (ENSPTIG00000014938) EXOSC5 (ENSPTIG00000015884) BCKDHA (ENSPTIG00000017890) ##22 DMAC2 (ENSPTIG00000019804) ERICH4 (ENSPTIG00000006672) ENSPTIG00000007025 CXCL17 (ENSPTIG00000008290) LIPE (ENSPTIG00000008874) ENSPTIG00000011269 MEGF8 (ENSPTIG00000011829) TMEM145 (ENSPTIG00000018901) PRR19 (ENSPTIG00000007221) PAFAH1B3 (ENSPTIG00000008030) CIC (ENSPTIG00000008996) ERF (ENSPTIG00000013584) GSK3A (ENSPTIG00000014636) ZNF526 (ENSPTIG00000016033) DEDD2 (ENSPTIG00000016247) Panthera_a ANCESTRAL SPECIES 22 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.a.b.a.b.d ENSGT00390000002861 ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b.n ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b lion MODERN SPECIES 15 PIH1D1 (ENSPLOG00000005668) ALDH16A1 (ENSPLOG00000005728) FLT3LG (ENSPLOG00000005848) ENSPLOG00000005914 RPS11 (ENSPLOG00000006028) FCGRT (ENSPLOG00000006103) RCN3 (ENSPLOG00000006156) CYP2S1 (ENSPLOG00000006185) AXL (ENSPLOG00000006282) HNRNPUL1 (ENSPLOG00000006494) CCDC97 (ENSPLOG00000006566) TGFB1 (ENSPLOG00000006598) B9D2 (ENSPLOG00000006618) TMEM91 (ENSPLOG00000006632) EXOSC5 (ENSPLOG00000006679) BCKDHA (ENSPLOG00000006715) ##22 B3GNT8 (ENSPLOG00000006750) DMAC2 (ENSPLOG00000006789) ENSPLOG00000006846 ENSPLOG00000006902 CXCL17 (ENSPLOG00000007022) ENSPLOG00000007035 LIPE (ENSPLOG00000007057) CNFN (ENSPLOG00000007085) ENSPLOG00000007105 TMEM145 (ENSPLOG00000007245) PRR19 (ENSPLOG00000007462) PAFAH1B3 (ENSPLOG00000007480) CIC (ENSPLOG00000007521) ERF (ENSPLOG00000007581) GSK3A (ENSPLOG00000007615) leopard MODERN SPECIES 165 CYP2S1 (ENSPPRG00000003103) AXL (ENSPPRG00000003195) HNRNPUL1 (ENSPPRG00000003397) CCDC97 (ENSPPRG00000003623) TGFB1 (ENSPPRG00000003627) B9D2 (ENSPPRG00000003663) TMEM91 (ENSPPRG00000003672) EXOSC5 (ENSPPRG00000003713) BCKDHA (ENSPPRG00000003740) ##22 ENSPPRG00000011743 ENSPPRG00000011744 DMAC2 (ENSPPRG00000003894) ERICH4 (ENSPPRG00000003928) ENSPPRG00000004013 ENSPPRG00000004091 CXCL17 (ENSPPRG00000004116) LIPE (ENSPPRG00000004305) CNFN (ENSPPRG00000004339) MEGF8 (ENSPPRG00000004589) TMEM145 (ENSPPRG00000004698) PRR19 (ENSPPRG00000004728) PAFAH1B3 (ENSPPRG00000004745) CIC (ENSPPRG00000004914) GSK3A (ENSPPRG00000005007) Cat MODERN SPECIES 246 EGLN2 (ENSFCAG00000024463) ENSFCAG00000053792 CYP2F1 (ENSFCAG00000027930) CYP2A13 (ENSFCAG00000008557) CYP2A25 (ENSFCAG00000040403) CYP2G2 (ENSFCAG00000019378) CYP2B6 (ENSFCAG00000033530) CYP2S1 (ENSFCAG00000013094) AXL (ENSFCAG00000030995) HNRNPUL1 (ENSFCAG00000005433) CCDC97 (ENSFCAG00000005435) TGFB1 (ENSFCAG00000005436) B9D2 (ENSFCAG00000036761) TMEM91 (ENSFCAG00000025096) EXOSC5 (ENSFCAG00000033818) BCKDHA (ENSFCAG00000005438) ##22 B3GNT8 (ENSFCAG00000005440) DMAC2 (ENSFCAG00000002361) ERICH4 (ENSFCAG00000009918) ENSFCAG00000003035 CXCL17 (ENSFCAG00000040968) ENSFCAG00000053328 LIPE (ENSFCAG00000022678) CNFN (ENSFCAG00000012749) MEGF8 (ENSFCAG00000012745) TMEM145 (ENSFCAG00000012742) PRR19 (ENSFCAG00000012741) PAFAH1B3 (ENSFCAG00000003598) CIC (ENSFCAG00000012737) ERF (ENSFCAG00000030101) GSK3A (ENSFCAG00000030846) Laurasiatheria_c ANCESTRAL SPECIES 4 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00990000212049 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT00730000111056 ENSGT00980000198994 ENSGT00990000204044 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00910000148701 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Chiroptera ANCESTRAL SPECIES 16 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131.b ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00990000212049 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT01100000263479.D.a.b.a.b.a ENSGT01100000263479.D.a.a.a.b ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 ENSGT00940000160476 ENSGT00940000158852 ENSGT00940000161799 ENSGT00940000160115 Megabat MODERN SPECIES 3826 ENSPVAG00000013074 CCDC97 (ENSPVAG00000013077) TGFB1 (ENSPVAG00000013079) B9D2 (ENSPVAG00000013080) TMEM91 (ENSPVAG00000024246) EXOSC5 (ENSPVAG00000013083) BCKDHA (ENSPVAG00000013081) ##22 B3GNT8 (ENSPVAG00000013085) DMAC2 (ENSPVAG00000013086) Microchiroptera ANCESTRAL SPECIES 18 ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131.b ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00990000212049 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT01100000263479.D.a.b.a.b.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.f ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 ENSGT00940000160476 ENSGT00940000158852 ENSGT00940000161799 ENSGT00940000160115 ENSGT00390000008714.b Greater horseshoe bat MODERN SPECIES 6 MIA (ENSRFEG00010012874) RAB4B (ENSRFEG00010012965) ENSRFEG00010013038 ENSRFEG00010013077 ENSRFEG00010013150 ENSRFEG00010013288 CYP2B6 (ENSRFEG00010013436) CYP2S1 (ENSRFEG00010013542) ENSRFEG00010013576 AXL (ENSRFEG00010013641) HNRNPUL1 (ENSRFEG00010014327) CCDC97 (ENSRFEG00010015073) ENSRFEG00010015097 TGFB1 (ENSRFEG00010015153) B9D2 (ENSRFEG00010015216) BCKDHA (ENSRFEG00010015299) ##22 EXOSC5 (ENSRFEG00010015500) B3GNT8 (ENSRFEG00010015628) DMAC2 (ENSRFEG00010015659) ENSRFEG00010015843 LYPD4 (ENSRFEG00010015914) DMRTC2 (ENSRFEG00010016064) ENSRFEG00010016186 CD79A (ENSRFEG00010016343) ARHGEF1 (ENSRFEG00010016400) ERFL (ENSRFEG00010016938) RABAC1 (ENSRFEG00010017020) ATP1A3 (ENSRFEG00010017150) GRIK5 (ENSRFEG00010017406) ZNF574 (ENSRFEG00010017506) POU2F2 (ENSRFEG00010017530) Microbat MODERN SPECIES 1357 EGLN2 (ENSMLUG00000000224) ENSMLUG00000026190 ENSMLUG00000011027 ENSMLUG00000023314 ENSMLUG00000027238 ENSMLUG00000007247 CYP2B6 (ENSMLUG00000028590) ENSMLUG00000009670 CYP2S1 (ENSMLUG00000013059) AXL (ENSMLUG00000013069) HNRNPUL1 (ENSMLUG00000013084) CCDC97 (ENSMLUG00000023105) TGFB1 (ENSMLUG00000013098) B9D2 (ENSMLUG00000023056) EXOSC5 (ENSMLUG00000013104) BCKDHA (ENSMLUG00000007821) ##22 B3GNT8 (ENSMLUG00000007859) DMAC2 (ENSMLUG00000025213) ENSMLUG00000023690 ENSMLUG00000028687 Equus ANCESTRAL SPECIES 1 ENSGT00940000154117.d.z.a ENSGT00940000154117.d.`b ENSGT00940000161670 ENSGT00940000157162.c.b.e.b ENSGT00940000157162.c.a ENSGT00940000157162.c.b.e.a ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00990000212049 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.C.c.b ENSGT01100000263479.C.c.a ENSGT01100000263479.D.a.b.b.e.a.a.b.b.b ENSGT01100000263479.D.a.b.b.e.a.a.b.a.a ENSGT01100000263479.D.a.b.b.e.a.a.b.b.a ENSGT01100000263479.D.a.b.b.f.b ENSGT01100000263479.D.a.b.b.f.a ENSGT00390000002861.e.b ENSGT01100000263479.D.a.b.b.e.a.a.a ENSGT01100000263479.D.a.b.b.e.a.b.a ENSGT00390000002861.f ENSGT01100000263479.D.a.b.b.e.a.b.b Horse MODERN SPECIES 1 CYP2A13 (ENSECAG00000008847) ENSECAG00000023770 ENSECAG00000057565 CYP2G2 (ENSECAG00000024323) CYP2B46 (ENSECAG00000011415) CYP2B6 (ENSECAG00000009466) CYP2S1 (ENSECAG00000009026) AXL (ENSECAG00000011471) HNRNPUL1 (ENSECAG00000024149) TGFB1 (ENSECAG00000011671) CCDC97 (ENSECAG00000010187) ENSECAG00000031880 B9D2 (ENSECAG00000057503) TMEM91 (ENSECAG00000024140) EXOSC5 (ENSECAG00000024210) BCKDHA (ENSECAG00000012246) ##22 B3GNT8 (ENSECAG00000024670) ERICH4 (ENSECAG00000037859) DMAC2 (ENSECAG00000024751) ENSECAG00000032976 ENSECAG00000047509 ENSECAG00000059690 ENSECAG00000035028 ENSECAG00000055081 ENSECAG00000048666 ENSECAG00000028632 ENSECAG00000026978 ENSECAG00000051554 #21 ENSECAG00000053825 ENSECAG00000053054 ENSECAG00000020364 Donkey MODERN SPECIES 18 ENSEASG00005033321 ENSEASG00005004861 ENSEASG00005004834 ENSEASG00005003545 ENSEASG00005003457 ENSEASG00005035262 ENSEASG00005006356 CYP2S1 (ENSEASG00005006354) ENSEASG00005006349 HNRNPUL1 (ENSEASG00005006344) CCDC97 (ENSEASG00005006340) TGFB1 (ENSEASG00005028582) B9D2 (ENSEASG00005006333) TMEM91 (ENSEASG00005026907) EXOSC5 (ENSEASG00005006327) BCKDHA (ENSEASG00005006323) ##22 B3GNT8 (ENSEASG00005037317) DMAC2 (ENSEASG00005006321) ENSEASG00005033682 ENSEASG00005006312 ENSEASG00005006310 ENSEASG00005003451 ENSEASG00005006307 ENSEASG00005003456 ENSEASG00005006303 ENSEASG00005006292 ENSEASG00005025926 ENSEASG00005006286 ENSEASG00005006309 ENSEASG00005006283 ENSEASG00005038772 Artiodactyla ANCESTRAL SPECIES 5 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT00940000171483 ENSGT00730000111056 ENSGT00990000204044 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00910000148701 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Suina ANCESTRAL SPECIES 2 ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.a.c.a.b.a ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 ENSGT00390000008714.b Pig MODERN SPECIES 14 RAB4B (ENSSSCG00000002996) ENSSSCG00000002995 CYP2F1 (ENSSSCG00000002994) CYP2A19 (ENSSSCG00000002993) ENSSSCG00000028627 CYP2B6B (ENSSSCG00000054571) ENSSSCG00000003006 CYP2S1 (ENSSSCG00000032803) AXL (ENSSSCG00000038806) HNRNPUL1 (ENSSSCG00000030049) CCDC97 (ENSSSCG00000003016) TGFB1 (ENSSSCG00000003017) B9D2 (ENSSSCG00000003013) TMEM91 (ENSSSCG00000057647) EXOSC5 (ENSSSCG00000003015) BCKDHA (ENSSSCG00000028794) ##22 B3GNT8 (ENSSSCG00000032536) DMAC2 (ENSSSCG00000032711) ERICH4 (ENSSSCG00000040022) ENSSSCG00000020837 ENSSSCG00000033133 LIPE (ENSSSCG00000003018) CNFN (ENSSSCG00000027022) ENSSSCG00000059920 PAFAH1B3 (ENSSSCG00000029070) TMEM145 (ENSSSCG00000003022) PRR19 (ENSSSCG00000003024) CIC (ENSSSCG00000003030) ERF (ENSSSCG00000032154) GSK3A (ENSSSCG00000003035) ZNF526 (ENSSSCG00000028054) Chacoan peccary MODERN SPECIES 25 MIA (ENSCWAG00000003397) RAB4B (ENSCWAG00000003405) EGLN2 (ENSCWAG00000003413) CYP2F1 (ENSCWAG00000003421) ENSCWAG00000003435 ENSCWAG00000003450 CYP2B6 (ENSCWAG00000003473) CYP2S1 (ENSCWAG00000003497) AXL (ENSCWAG00000003527) HNRNPUL1 (ENSCWAG00000003619) CCDC97 (ENSCWAG00000003650) TGFB1 (ENSCWAG00000003658) B9D2 (ENSCWAG00000003676) TMEM91 (ENSCWAG00000003707) EXOSC5 (ENSCWAG00000003779) BCKDHA (ENSCWAG00000003819) ##22 B3GNT8 (ENSCWAG00000003851) DMAC2 (ENSCWAG00000003874) ERICH4 (ENSCWAG00000003948) ENSCWAG00000003982 LIPE (ENSCWAG00000004054) CNFN (ENSCWAG00000004139) MEGF8 (ENSCWAG00000004189) TMEM145 (ENSCWAG00000004400) PRR19 (ENSCWAG00000004472) PAFAH1B3 (ENSCWAG00000004497) CIC (ENSCWAG00000004546) Artiodactyla_a ANCESTRAL SPECIES 4 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b ENSGT00390000002861 ENSGT00940000171483 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00910000148701 ENSGT00950000183199.a.b ENSGT00940000159960 Camelidae ANCESTRAL SPECIES 15 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT00390000002861 ENSGT00730000111056 ENSGT00990000204044 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 Arabian camel MODERN SPECIES 35 RAB4B (ENSCDRG00005013349) ENSCDRG00005013401 CYP2F1 (ENSCDRG00005013510) ENSCDRG00005013573 ENSCDRG00005013699 ENSCDRG00005013819 CYP2B6 (ENSCDRG00005014703) CYP2S1 (ENSCDRG00005014805) AXL (ENSCDRG00005014877) HNRNPUL1 (ENSCDRG00005015438) CCDC97 (ENSCDRG00005016129) TGFB1 (ENSCDRG00005016190) B9D2 (ENSCDRG00005016216) TMEM91 (ENSCDRG00005016250) EXOSC5 (ENSCDRG00005016327) BCKDHA (ENSCDRG00005016437) ##22 B3GNT8 (ENSCDRG00005016531) DMAC2 (ENSCDRG00005016562) ERICH4 (ENSCDRG00005016660) ENSCDRG00005016719 ENSCDRG00005017139 ENSCDRG00005017153 ENSCDRG00005017189 LIPE (ENSCDRG00005017218) ENSCDRG00005017296 CNFN (ENSCDRG00005017339) ENSCDRG00005017359 TMEM145 (ENSCDRG00005017397) PRR19 (ENSCDRG00005017429) PAFAH1B3 (ENSCDRG00005017451) CIC (ENSCDRG00005017516) Artiodactyla_b ANCESTRAL SPECIES 4 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT00940000171483 ENSGT00730000111056 ENSGT00990000204044 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00910000148701 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Pecora ANCESTRAL SPECIES 4 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a.a.a ENSGT00940000157162.c.a.a.b ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.h.a.b.a ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00910000148701 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Percora_a ANCESTRAL SPECIES 4 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a.a.a ENSGT00940000157162.c.a.a.b ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.h.a.b.a ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00910000148701 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Bovidae ANCESTRAL SPECIES 4 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a.a.a ENSGT00940000157162.c.a.a.b ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.h.a.b.a ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00910000148701 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Bovinae ANCESTRAL SPECIES 3 ENSGT00940000162522 ENSGT00550000074618.a.b.bb ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a.a.a ENSGT00940000157162.c.a.a.b ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.h.a.b.a ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 Bos ANCESTRAL SPECIES 4 ENSGT00940000162522 ENSGT00550000074618.a.b.bb ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a.a.a ENSGT00940000157162.c.a.a.b ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823.cb.a ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.h.a.b.a ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 Bos_b ANCESTRAL SPECIES ENSGT00530000063484.a.k.b.a ENSGT00940000162522 ENSGT00550000074618.a.b.bb ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a.a.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823.cb.a ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b.h.a.b.a ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 Cow MODERN SPECIES 9 ENSBTAG00000001350 CYP2F1 (ENSBTAG00000046805) ENSBTAG00000054384 CYP2A13 (ENSBTAG00000047815) ENSBTAG00000003272 CYP2B39 (ENSBTAG00000048763) CYP2B6 (ENSBTAG00000003871) CYP2S1 (ENSBTAG00000018240) AXL (ENSBTAG00000003166) HNRNPUL1 (ENSBTAG00000003168) CCDC97 (ENSBTAG00000039635) TGFB1 (ENSBTAG00000020457) B9D2 (ENSBTAG00000023452) TMEM91 (ENSBTAG00000038711) EXOSC5 (ENSBTAG00000016034) BCKDHA (ENSBTAG00000016037) ##22 B3GNT8 (ENSBTAG00000016041) DMAC2 (ENSBTAG00000009449) ERICH4 (ENSBTAG00000047423) ENSBTAG00000050227 CEACAM1 (ENSBTAG00000005615) ENSBTAG00000052955 LIPE (ENSBTAG00000038321) CNFN (ENSBTAG00000031004) MEGF8 (ENSBTAG00000031001) TMEM145 (ENSBTAG00000039015) PRR19 (ENSBTAG00000013283) PAFAH1B3 (ENSBTAG00000019787) CIC (ENSBTAG00000019785) ERF (ENSBTAG00000000332) GSK3A (ENSBTAG00000020756) Hybrid Bos Indicus MODERN SPECIES 9 EGLN2 (ENSBIXG00005016231) ENSBIXG00005016251 CYP2F1 (ENSBIXG00005016260) ENSBIXG00005016275 ENSBIXG00005002593 ENSBIXG00005016724 ENSBIXG00005016881 CYP2S1 (ENSBIXG00005016913) AXL (ENSBIXG00005016997) HNRNPUL1 (ENSBIXG00005002818) CCDC97 (ENSBIXG00005017387) TGFB1 (ENSBIXG00005002833) B9D2 (ENSBIXG00005017466) EXOSC5 (ENSBIXG00005017485) B3GNT8 (ENSBIXG00005017509) BCKDHA (ENSBIXG00005017645) ##22 DMAC2 (ENSBIXG00005017716) ERICH4 (ENSBIXG00005017740) ENSBIXG00005017765 ENSBIXG00005002888 ENSBIXG00005017862 ENSBIXG00005017878 LIPE (ENSBIXG00005017907) CNFN (ENSBIXG00005017936) MEGF8 (ENSBIXG00005002929) TMEM145 (ENSBIXG00005018074) PRR19 (ENSBIXG00005018080) ENSBIXG00005018104 CIC (ENSBIXG00005018122) ERF (ENSBIXG00005018139) GSK3A (ENSBIXG00005018197) Bos_a ANCESTRAL SPECIES 16 ENSGT00940000162522 ENSGT00550000074618.a.b.bb ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a.a.a ENSGT00940000157162.c.a.a.b ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823.cb.a ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01010000223350 ENSGT01100000263479.D.a.b.h.a.b.a ENSGT00940000171483 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Wild yak MODERN SPECIES 332 CYP2F1 (ENSBMUG00000022981) ENSBMUG00000023006 ENSBMUG00000023013 ENSBMUG00000023124 ENSBMUG00000023159 ENSBMUG00000023188 ENSBMUG00000023202 CYP2S1 (ENSBMUG00000023225) AXL (ENSBMUG00000023253) HNRNPUL1 (ENSBMUG00000023314) CCDC97 (ENSBMUG00000023344) TGFB1 (ENSBMUG00000023351) B9D2 (ENSBMUG00000023361) TMEM91 (ENSBMUG00000023374) EXOSC5 (ENSBMUG00000023383) BCKDHA (ENSBMUG00000023396) ##22 B3GNT8 (ENSBMUG00000023403) DMAC2 (ENSBMUG00000023419) ERICH4 (ENSBMUG00000023426) Domestic yak MODERN SPECIES 12 ENSBGRG00000014775 ENSBGRG00000021112 ENSBGRG00000021088 ENSBGRG00000020906 ENSBGRG00000020537 ENSBGRG00000020501 CYP2S1 (ENSBGRG00000020434) AXL (ENSBGRG00000020110) HNRNPUL1 (ENSBGRG00000019572) CCDC97 (ENSBGRG00000019469) TGFB1 (ENSBGRG00000019398) B9D2 (ENSBGRG00000019369) TMEM91 (ENSBGRG00000019245) EXOSC5 (ENSBGRG00000019201) ENSBGRG00000019164 BCKDHA (ENSBGRG00000019059) ##22 B3GNT8 (ENSBGRG00000019050) DMAC2 (ENSBGRG00000018867) ERICH4 (ENSBGRG00000018840) ENSBGRG00000018623 ENSBGRG00000018545 LIPE (ENSBGRG00000018426) CNFN (ENSBGRG00000018386) ENSBGRG00000018363 TMEM145 (ENSBGRG00000018156) PRR19 (ENSBGRG00000018108) PAFAH1B3 (ENSBGRG00000018054) CIC (ENSBGRG00000017444) ENSBGRG00000017376 GSK3A (ENSBGRG00000017191) ZNF526 (ENSBGRG00000017155) American bison MODERN SPECIES 3196 ENSBBBG00000004272 CYP2F1 (ENSBBBG00000017244) ENSBBBG00000008770 ENSBBBG00000007459 ENSBBBG00000017167 ENSBBBG00000004238 ENSBBBG00000016936 CYP2S1 (ENSBBBG00000016755) AXL (ENSBBBG00000016725) HNRNPUL1 (ENSBBBG00000016705) CCDC97 (ENSBBBG00000016481) TGFB1 (ENSBBBG00000016471) B9D2 (ENSBBBG00000016452) TMEM91 (ENSBBBG00000016435) EXOSC5 (ENSBBBG00000016397) BCKDHA (ENSBBBG00000016368) ##22 B3GNT8 (ENSBBBG00000002521) DMAC2 (ENSBBBG00000016346) ENSBBBG00000007370 Caprinae ANCESTRAL SPECIES 4 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.a.a.a ENSGT00940000157162.c.b.i.a ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000157162.c.b.j ENSGT00390000006319 ENSGT01100000263479.D.a.b.h.a.b.a ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00910000148701 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Rambouillet Sheep MODERN SPECIES 5 ENSOARG00020015383 ENSOARG00020015769 FBL (ENSOARG00020015836) DYRK1B (ENSOARG00020015979) ENSOARG00020016126 ENSOARG00020016175 ENSOARG00020016268 CYP2S1 (ENSOARG00020016415) AXL (ENSOARG00020016520) HNRNPUL1 (ENSOARG00020016689) CCDC97 (ENSOARG00020017796) TGFB1 (ENSOARG00020017842) B9D2 (ENSOARG00020017895) TMEM91 (ENSOARG00020017943) EXOSC5 (ENSOARG00020018062) BCKDHA (ENSOARG00020018183) ##22 B3GNT8 (ENSOARG00020018420) DMAC2 (ENSOARG00020018442) ENSOARG00020018539 ENSOARG00020019378 LIPE (ENSOARG00020019526) CNFN (ENSOARG00020019872) MEGF8 (ENSOARG00020019929) TMEM145 (ENSOARG00020020232) PRR19 (ENSOARG00020020341) PAFAH1B3 (ENSOARG00020020383) CIC (ENSOARG00020020421) ERF (ENSOARG00020020689) GSK3A (ENSOARG00020020722) ZNF526 (ENSOARG00020020823) DEDD2 (ENSOARG00020020833) Goat MODERN SPECIES 9 EGLN2 (ENSCHIG00000026382) CYP2F3 (ENSCHIG00000014344) CYP2A13 (ENSCHIG00000001609) CYP2G1 (ENSCHIG00000013687) ENSCHIG00000018905 ENSCHIG00000026532 ENSCHIG00000021457 CYP2S1 (ENSCHIG00000022245) AXL (ENSCHIG00000020380) HNRNPUL1 (ENSCHIG00000015165) CCDC97 (ENSCHIG00000018846) TGFB1 (ENSCHIG00000011916) B9D2 (ENSCHIG00000024038) TMEM91 (ENSCHIG00000013235) EXOSC5 (ENSCHIG00000026498) BCKDHA (ENSCHIG00000025690) ##22 B3GNT8 (ENSCHIG00000011490) DMAC2 (ENSCHIG00000022889) CYP2B6 (ENSCHIG00000021270) ERICH4 (ENSCHIG00000015175) ENSCHIG00000007384 LIPE (ENSCHIG00000020815) CNFN (ENSCHIG00000014477) MEGF8 (ENSCHIG00000015019) TMEM145 (ENSCHIG00000003376) PRR19 (ENSCHIG00000022284) ENSCHIG00000007871 PAFAH1B3 (ENSCHIG00000019643) CIC (ENSCHIG00000015534) ERF (ENSCHIG00000019624) GSK3A (ENSCHIG00000027180) Siberian musk deer MODERN SPECIES 124 RAB4B (ENSMMSG00000000033) EGLN2 (ENSMMSG00000000018) CYP2F1 (ENSMMSG00000000012) ENSMMSG00000020980 ENSMMSG00000020938 ENSMMSG00000020907 ENSMMSG00000020880 CYP2S1 (ENSMMSG00000020850) AXL (ENSMMSG00000020762) HNRNPUL1 (ENSMMSG00000020628) CCDC97 (ENSMMSG00000020594) TGFB1 (ENSMMSG00000020561) B9D2 (ENSMMSG00000020537) TMEM91 (ENSMMSG00000020489) EXOSC5 (ENSMMSG00000020437) BCKDHA (ENSMMSG00000020382) ##22 B3GNT8 (ENSMMSG00000020371) DMAC2 (ENSMMSG00000020294) ERICH4 (ENSMMSG00000020233) ENSMMSG00000020209 LIPE (ENSMMSG00000020179) CNFN (ENSMMSG00000020148) ENSMMSG00000020131 TMEM145 (ENSMMSG00000020115) PRR19 (ENSMMSG00000020102) PAFAH1B3 (ENSMMSG00000020080) CIC (ENSMMSG00000020009) ERF (ENSMMSG00000019974) GSK3A (ENSMMSG00000019904) ZNF526 (ENSMMSG00000019889) DEDD2 (ENSMMSG00000019867) Yarkand deer MODERN SPECIES 27 ENSCHYG00000027167 MIA (ENSCHYG00000027168) RAB4B (ENSCHYG00000027169) EGLN2 (ENSCHYG00000027170) CYP2F1 (ENSCHYG00000027171) ENSCHYG00000027172 ENSCHYG00000027173 ENSCHYG00000027174 ENSCHYG00000027175 CYP2S1 (ENSCHYG00000027176) AXL (ENSCHYG00000027177) HNRNPUL1 (ENSCHYG00000027178) CCDC97 (ENSCHYG00000027179) TGFB1 (ENSCHYG00000027180) B9D2 (ENSCHYG00000027181) BCKDHA (ENSCHYG00000027182) ##22 ENSCHYG00000027183 B3GNT8 (ENSCHYG00000027184) DMAC2 (ENSCHYG00000027185) ERICH4 (ENSCHYG00000000043) LIPE (ENSCHYG00000000071) CNFN (ENSCHYG00000000115) MEGF8 (ENSCHYG00000000158) TMEM145 (ENSCHYG00000000283) PRR19 (ENSCHYG00000000321) PAFAH1B3 (ENSCHYG00000000329) CIC (ENSCHYG00000000355) ERF (ENSCHYG00000000404) GSK3A (ENSCHYG00000000417) ZNF526 (ENSCHYG00000000435) DEDD2 (ENSCHYG00000000451) Cetacea ANCESTRAL SPECIES 6 ENSGT00390000007046.b.a.b ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b ENSGT00940000171483 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Odontoceti ANCESTRAL SPECIES 6 ENSGT00390000007046.b.a.b ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b ENSGT00940000171483 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Odontoceti_a ANCESTRAL SPECIES 7 ENSGT00390000012368 ENSGT00390000007046.b.a.b ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000154117.d ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b ENSGT00940000171483 ENSGT00990000204044 ENSGT00530000063351.a.a ENSGT00390000002861 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 Dolphin MODERN SPECIES 3263 TGFB1 (ENSTTRG00000012848) B9D2 (ENSTTRG00000012853) TMEM91 (ENSTTRG00000021358) EXOSC5 (ENSTTRG00000012863) BCKDHA (ENSTTRG00000012859) ##22 B3GNT8 (ENSTTRG00000012871) DMAC2 (ENSTTRG00000012878) ERICH4 (ENSTTRG00000012887) Odontoceti_b ANCESTRAL SPECIES 5 ENSGT00390000012368 ENSGT00390000007046.b.a.b ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000154117.d ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b ENSGT00940000171483 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Monodontidae ANCESTRAL SPECIES 3 ENSGT00390000012368 ENSGT00390000007046.b.a.b ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000154117.d ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.b ENSGT00940000171483 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Beluga whale MODERN SPECIES 14 ITPKC (ENSDLEG00000004468) CUNH19orf54 (ENSDLEG00000004456) SNRPA (ENSDLEG00000004452) MIA (ENSDLEG00000004442) RAB4B (ENSDLEG00000004429) EGLN2 (ENSDLEG00000004418) ENSDLEG00000004405 ENSDLEG00000004373 CYP2S1 (ENSDLEG00000004364) AXL (ENSDLEG00000004283) HNRNPUL1 (ENSDLEG00000004255) CCDC97 (ENSDLEG00000004253) TGFB1 (ENSDLEG00000004251) B9D2 (ENSDLEG00000004248) EXOSC5 (ENSDLEG00000004244) BCKDHA (ENSDLEG00000004236) ##22 B3GNT8 (ENSDLEG00000004233) DMAC2 (ENSDLEG00000004229) ERICH4 (ENSDLEG00000004226) ENSDLEG00000004222 ENSDLEG00000004219 LIPE (ENSDLEG00000002330) CNFN (ENSDLEG00000002318) MEGF8 (ENSDLEG00000002276) TMEM145 (ENSDLEG00000002254) PRR19 (ENSDLEG00000002248) PAFAH1B3 (ENSDLEG00000002240) CIC (ENSDLEG00000002223) ERF (ENSDLEG00000002213) GSK3A (ENSDLEG00000002202) ZNF526 (ENSDLEG00000002191) Narwhal MODERN SPECIES 296 COQ8B (ENSMMNG00015002945) ITPKC (ENSMMNG00015002973) ACTMAP (ENSMMNG00015002997) SNRPA (ENSMMNG00015003013) MIA (ENSMMNG00015003039) RAB4B (ENSMMNG00015003054) ENSMMNG00015003079 CYP2S1 (ENSMMNG00015003157) AXL (ENSMMNG00015003196) HNRNPUL1 (ENSMMNG00015003270) CCDC97 (ENSMMNG00015003304) TGFB1 (ENSMMNG00015003324) B9D2 (ENSMMNG00015003344) TMEM91 (ENSMMNG00015003373) EXOSC5 (ENSMMNG00015003426) BCKDHA (ENSMMNG00015003452) ##22 B3GNT8 (ENSMMNG00015003478) DMAC2 (ENSMMNG00015003502) ERICH4 (ENSMMNG00015003517) ENSMMNG00015003530 ENSMMNG00015003542 LIPE (ENSMMNG00015003560) ENSMMNG00015003571 CNFN (ENSMMNG00015003587) MEGF8 (ENSMMNG00015003617) TMEM145 (ENSMMNG00015003703) PRR19 (ENSMMNG00015003832) PAFAH1B3 (ENSMMNG00015003845) CIC (ENSMMNG00015003888) ERF (ENSMMNG00015003962) GSK3A (ENSMMNG00015003974) Vaquita MODERN SPECIES 10 COQ8B (ENSPSNG00000019004) ITPKC (ENSPSNG00000018914) ACTMAP (ENSPSNG00000018872) SNRPA (ENSPSNG00000018837) RAB4B (ENSPSNG00000018764) EGLN2 (ENSPSNG00000018688) ENSPSNG00000018630 CYP2S1 (ENSPSNG00000018288) AXL (ENSPSNG00000017923) HNRNPUL1 (ENSPSNG00000017858) CCDC97 (ENSPSNG00000017801) TGFB1 (ENSPSNG00000017763) B9D2 (ENSPSNG00000017733) TMEM91 (ENSPSNG00000017581) EXOSC5 (ENSPSNG00000017550) BCKDHA (ENSPSNG00000017396) ##22 ENSPSNG00000017313 ERICH4 (ENSPSNG00000017237) ENSPSNG00000017162 ENSPSNG00000017125 ENSPSNG00000017088 ENSPSNG00000017051 LIPE (ENSPSNG00000017024) CNFN (ENSPSNG00000016978) ENSPSNG00000016933 TMEM145 (ENSPSNG00000016852) PAFAH1B3 (ENSPSNG00000016663) CIC (ENSPSNG00000016537) ERF (ENSPSNG00000016478) GSK3A (ENSPSNG00000016329) ZNF526 (ENSPSNG00000016306) Sperm whale MODERN SPECIES 8 POU2F2 (ENSPCTG00005005510) DEDD2 (ENSPCTG00005006152) ZNF526 (ENSPCTG00005006185) GSK3A (ENSPCTG00005006203) ERF (ENSPCTG00005006251) CIC (ENSPCTG00005006286) PAFAH1B3 (ENSPCTG00005006406) PRR19 (ENSPCTG00005006423) TMEM145 (ENSPCTG00005006442) ENSPCTG00005006481 ENSPCTG00005006495 LIPE (ENSPCTG00005006526) ENSPCTG00005006540 ENSPCTG00005006569 ENSPCTG00005006591 BCKDHA (ENSPCTG00005006616) ##22 B3GNT8 (ENSPCTG00005006644) ENSPCTG00005006654 ENSPCTG00005006668 AXL (ENSPCTG00005006693) CYP2S1 (ENSPCTG00005006912) ENSPCTG00005006942 ENSPCTG00005006970 ENSPCTG00005006988 LTBP4 (ENSPCTG00005007058) SHKBP1 (ENSPCTG00005007527) SPTBN4 (ENSPCTG00005007644) AKT2 (ENSPCTG00005007740) ENSPCTG00005007911 ENSPCTG00005007924 ##14 ZNF546 (ENSPCTG00005007934) Blue whale MODERN SPECIES 10 ACTMAP (ENSBMSG00010018474) SNRPA (ENSBMSG00010018440) MIA (ENSBMSG00010018405) RAB4B (ENSBMSG00010018379) EGLN2 (ENSBMSG00010018330) ENSBMSG00010018075 ENSBMSG00010018017 CYP2S1 (ENSBMSG00010017986) AXL (ENSBMSG00010017808) HNRNPUL1 (ENSBMSG00010017666) CCDC97 (ENSBMSG00010017621) TGFB1 (ENSBMSG00010017563) B9D2 (ENSBMSG00010017476) TMEM91 (ENSBMSG00010017354) EXOSC5 (ENSBMSG00010017251) BCKDHA (ENSBMSG00010017121) ##22 B3GNT8 (ENSBMSG00010017104) DMAC2 (ENSBMSG00010016906) ERICH4 (ENSBMSG00010016823) ENSBMSG00010016795 ENSBMSG00010016729 ENSBMSG00010016682 LIPE (ENSBMSG00010016630) CNFN (ENSBMSG00010016586) ENSBMSG00010016564 TMEM145 (ENSBMSG00010016521) PRR19 (ENSBMSG00010016489) PAFAH1B3 (ENSBMSG00010016458) CIC (ENSBMSG00010016308) ERF (ENSBMSG00010016255) GSK3A (ENSBMSG00010016150) Euarchontoglires ANCESTRAL SPECIES 5 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.c.b.a ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000154117.d ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.d ENSGT01100000263479.F ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 Primates ANCESTRAL SPECIES 15 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT00530000063351.a.a ENSGT01100000263479.D.a.c.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 ENSGT00940000160476 ENSGT00940000158852 Haplorrhini ANCESTRAL SPECIES 16 ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT00530000063351.a.a ENSGT01100000263479.D.a.c.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 ENSGT00940000160476 ENSGT00940000158852 Simiiformes ANCESTRAL SPECIES 16 ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.H ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 ENSGT00940000160476 Catarrhini ANCESTRAL SPECIES ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d.h.b ENSGT00940000154117.d.h.a.b ENSGT00940000161670 ENSGT00940000154117.d.h.a.a ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.H ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 ENSGT00940000160476 Hominoidea ANCESTRAL SPECIES ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d.h.a.a ENSGT00940000157162.c.b.o ENSGT00940000154117.d.h.b ENSGT00940000157162.c.b.p ENSGT00940000161670 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.f.a ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 ENSGT00940000160476 Hominidae ANCESTRAL SPECIES ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d.h.a.a ENSGT00940000157162.c.b.o ENSGT00940000157162.c.b.p ENSGT00940000161670 ENSGT00940000154117.d.h.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.f.a ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.b ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000157162.c.b.o ENSGT00940000154117.d.h.b.b ENSGT00940000154117.d.h.a.a.b ENSGT00940000157162.c.b.p ENSGT00940000161670 ENSGT00940000154117.d.h.b.a ENSGT00940000162522 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.f.a ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.b.a.b ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.b.b ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A Homo/Pan group ANCESTRAL SPECIES ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d.h.a.a.b ENSGT00940000157162.c.b.o ENSGT00940000157162.c.b.p ENSGT00940000161670 ENSGT00940000154117.d.h.b.a ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.f.a ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.b.a.b ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.b.b ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A Pan ANCESTRAL SPECIES 9 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d.h.a.a.b ENSGT00940000157162.c.b.o ENSGT00940000157162.c.b.p ENSGT00940000161670 ENSGT00940000154117.d.h.b.a ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500.a ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.f.a ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.b.a.b ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 Bonobo MODERN SPECIES 10 EGLN2 (ENSPPAG00000033518) CYP2A7 (ENSPPAG00000033546) ENSPPAG00000041200 CYP2B6 (ENSPPAG00000031682) CYP2G2 (ENSPPAG00000039965) CYP2A13 (ENSPPAG00000009548) CYP2F1 (ENSPPAG00000027893) CYP2S1 (ENSPPAG00000030359) AXL (ENSPPAG00000037698) HNRNPUL1 (ENSPPAG00000038140) CCDC97 (ENSPPAG00000030644) TGFB1 (ENSPPAG00000031615) ENSPPAG00000038078 B9D2 (ENSPPAG00000040371) EXOSC5 (ENSPPAG00000024210) BCKDHA (ENSPPAG00000036106) ##22 B3GNT8 (ENSPPAG00000025199) DMAC2 (ENSPPAG00000036960) ERICH4 (ENSPPAG00000029508) CEACAM4 (ENSPPAG00000031722) ENSPPAG00000040515 CEACAM5 (ENSPPAG00000033350) CEACAM6 (ENSPPAG00000035405) CEACAM3 (ENSPPAG00000038264) LYPD4 (ENSPPAG00000008791) ENSPPAG00000042029 RPS19 (ENSPPAG00000041030) CD79A (ENSPPAG00000038624) ARHGEF1 (ENSPPAG00000039794) ERFL (ENSPPAG00000032217) RABAC1 (ENSPPAG00000038053) Chimpanzee MODERN SPECIES 10 ENSPTRG00000047387 CYP2A7 (ENSPTRG00000033800) ENSPTRG00000033855 CYP2B6 (ENSPTRG00000023029) ENSPTRG00000011016 ENSPTRG00000011014 ENSPTRG00000043811 CYP2S1 (ENSPTRG00000011017) AXL (ENSPTRG00000011018) HNRNPUL1 (ENSPTRG00000011019) CCDC97 (ENSPTRG00000011020) TGFB1 (ENSPTRG00000011021) TMEM91 (ENSPTRG00000040138) B9D2 (ENSPTRG00000044046) EXOSC5 (ENSPTRG00000011024) BCKDHA (ENSPTRG00000011025) ##22 B3GNT8 (ENSPTRG00000011026) ENSPTRG00000011028 ERICH4 (ENSPTRG00000045049) CEACAM4 (ENSPTRG00000011029) CEACAM7 (ENSPTRG00000011030) CEACAM5 (ENSPTRG00000011031) CEACAM6 (ENSPTRG00000011063) CEACAM3 (ENSPTRG00000011033) LYPD4 (ENSPTRG00000011035) DMRTC2 (ENSPTRG00000011036) RPS19 (ENSPTRG00000011037) CD79A (ENSPTRG00000011038) ARHGEF1 (ENSPTRG00000011039) ERFL (ENSPTRG00000045867) RABAC1 (ENSPTRG00000011040) Human MODERN SPECIES 10 EGLN2 (ENSG00000269858) CYP2A6 (ENSG00000255974) CYP2A7 (ENSG00000198077) CYP2B6 (ENSG00000197408) CYP2A13 (ENSG00000197838) CYP2F1 (ENSG00000197446) CYP2S1 (ENSG00000167600) AXL (ENSG00000167601) HNRNPUL1 (ENSG00000105323) TGFB1 (ENSG00000105329) CCDC97 (ENSG00000142039) ENSG00000255730 TMEM91 (ENSG00000142046) B9D2 (ENSG00000123810) EXOSC5 (ENSG00000077348) BCKDHA (ENSG00000248098) ##22 B3GNT8 (ENSG00000177191) DMAC2 (ENSG00000105341) ERICH4 (ENSG00000204978) CEACAM21 (ENSG00000007129) CEACAM4 (ENSG00000105352) CEACAM7 (ENSG00000007306) CEACAM5 (ENSG00000105388) ENSG00000267881 CEACAM6 (ENSG00000086548) CEACAM3 (ENSG00000170956) LYPD4 (ENSG00000273111) DMRTC2 (ENSG00000142025) RPS19 (ENSG00000105372) CD79A (ENSG00000105369) ARHGEF1 (ENSG00000076928) Gorilla MODERN SPECIES 10 EGLN2 (ENSGGOG00000014955) CYP2A6 (ENSGGOG00000001307) ENSGGOG00000042283 ENSGGOG00000016113 CYP2B6 (ENSGGOG00000028231) ENSGGOG00000027952 CYP2F1 (ENSGGOG00000009716) CYP2S1 (ENSGGOG00000010181) AXL (ENSGGOG00000009790) HNRNPUL1 (ENSGGOG00000009804) CCDC97 (ENSGGOG00000026022) TGFB1 (ENSGGOG00000016591) ENSGGOG00000037608 B9D2 (ENSGGOG00000037111) EXOSC5 (ENSGGOG00000008428) BCKDHA (ENSGGOG00000013033) ##22 B3GNT8 (ENSGGOG00000004711) DMAC2 (ENSGGOG00000013041) ERICH4 (ENSGGOG00000013051) CEACAM21 (ENSGGOG00000039581) CEACAM4 (ENSGGOG00000001981) CEACAM7 (ENSGGOG00000014153) CEACAM5 (ENSGGOG00000010044) ENSGGOG00000026338 ENSGGOG00000012591 LYPD4 (ENSGGOG00000010514) DMRTC2 (ENSGGOG00000015274) RPS19 (ENSGGOG00000015279) CD79A (ENSGGOG00000015280) ARHGEF1 (ENSGGOG00000015282) ERFL (ENSGGOG00000022280) Orangutan MODERN SPECIES 10 EGLN2 (ENSPPYG00000010005) ENSPPYG00000032972 ENSPPYG00000010006 CYP2B6 (ENSPPYG00000029426) ENSPPYG00000010007 ENSPPYG00000030117 CYP2A13 (ENSPPYG00000010008) CYP2S1 (ENSPPYG00000010009) AXL (ENSPPYG00000010010) HNRNPUL1 (ENSPPYG00000010011) CCDC97 (ENSPPYG00000032261) TGFB1 (ENSPPYG00000010013) ENSPPYG00000036451 B9D2 (ENSPPYG00000010014) EXOSC5 (ENSPPYG00000010016) BCKDHA (ENSPPYG00000010015) ##22 B3GNT8 (ENSPPYG00000010017) DMAC2 (ENSPPYG00000010018) ERICH4 (ENSPPYG00000037945) CEACAM21 (ENSPPYG00000010020) CEACAM4 (ENSPPYG00000010021) CEACAM7 (ENSPPYG00000010022) CEACAM5 (ENSPPYG00000010051) CEACAM6 (ENSPPYG00000010024) CEACAM3 (ENSPPYG00000010026) LYPD4 (ENSPPYG00000010027) DMRTC2 (ENSPPYG00000010028) RPS19 (ENSPPYG00000010029) CD79A (ENSPPYG00000010030) ARHGEF1 (ENSPPYG00000010031) ERFL (ENSPPYG00000030541) Gibbon MODERN SPECIES 7 MIA (ENSNLEG00000013885) RAB4B (ENSNLEG00000013879) EGLN2 (ENSNLEG00000013858) ENSNLEG00000013856 ENSNLEG00000027356 CYP2B6 (ENSNLEG00000034738) CYP2G2 (ENSNLEG00000027364) CYP2S1 (ENSNLEG00000013841) AXL (ENSNLEG00000030020) HNRNPUL1 (ENSNLEG00000013751) CCDC97 (ENSNLEG00000013743) TGFB1 (ENSNLEG00000013717) ENSNLEG00000035342 ENSNLEG00000032260 EXOSC5 (ENSNLEG00000013696) BCKDHA (ENSNLEG00000013627) ##22 B3GNT8 (ENSNLEG00000013617) DMAC2 (ENSNLEG00000013614) ERICH4 (ENSNLEG00000013610) ENSNLEG00000013590 CEACAM7 (ENSNLEG00000013606) ENSNLEG00000013585 ENSNLEG00000031903 LYPD4 (ENSNLEG00000013578) DMRTC2 (ENSNLEG00000013548) ENSNLEG00000027781 CD79A (ENSNLEG00000013502) ENSNLEG00000013480 ERFL (ENSNLEG00000013477) RABAC1 (ENSNLEG00000013444) ATP1A3 (ENSNLEG00000013414) Cercopithecidae ANCESTRAL SPECIES 12 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000154117.d.h.a.a.c ENSGT00940000157162.c.b ENSGT00940000161670 ENSGT00940000154117.d.h.a.b ENSGT00940000162522 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.H ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.c.a.b ENSGT01100000263479.D.a.c.a.a.a.a.d ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A Cercopithecinae ANCESTRAL SPECIES 1 ENSGT00940000160655 ENSGT00940000154117.d.h.a.a.d ENSGT00940000157162.c.b ENSGT00940000161670 ENSGT00940000154117.d.h.a.a.c.b ENSGT00940000154117.d.h.a.b.b ENSGT00940000162522 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.H ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.c.a.b ENSGT01100000263479.D.a.c.a.a.a.a.d ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.f ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A Vervet Monkey MODERN SPECIES 25 RAB4B (ENSCSAG00000003639) EGLN2 (ENSCSAG00000003635) CYP2A24 (ENSCSAG00000003630) CYP2A23 (ENSCSAG00000003621) CYP2B6 (ENSCSAG00000003610) CYP2G2 (ENSCSAG00000003601) CYP2A28 (ENSCSAG00000003581) CYP2S1 (ENSCSAG00000003557) AXL (ENSCSAG00000003552) HNRNPUL1 (ENSCSAG00000003544) CCDC97 (ENSCSAG00000003538) TGFB1 (ENSCSAG00000003530) B9D2 (ENSCSAG00000003528) TMEM91 (ENSCSAG00000003525) EXOSC5 (ENSCSAG00000003522) BCKDHA (ENSCSAG00000003521) ##22 B3GNT8 (ENSCSAG00000019617) DMAC2 (ENSCSAG00000003519) ERICH4 (ENSCSAG00000003518) CEACAM7 (ENSCSAG00000003517) ENSCSAG00000003514 ENSCSAG00000003513 ENSCSAG00000003511 DMRTC2 (ENSCSAG00000003507) RPS19 (ENSCSAG00000003501) CD79A (ENSCSAG00000003499) ARHGEF1 (ENSCSAG00000003495) RABAC1 (ENSCSAG00000003491) ATP1A3 (ENSCSAG00000003487) GRIK5 (ENSCSAG00000003483) ZNF574 (ENSCSAG00000019618) Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT00940000161670.f ENSGT00940000154117.d.h.a.a.c.a ENSGT00940000154117.d.h.a.b.a ENSGT00940000157162.c.b ENSGT00940000161670.e ENSGT00940000154117.d.h.a.b.b ENSGT00940000162522 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.H ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.c.a.b ENSGT01100000263479.D.a.c.a.a.a.a.d ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00390000013102.f ENSGT00940000154363.A ENSGT00940000161180 Macaca ANCESTRAL SPECIES 12 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000154117.d.h.a.a.c.b ENSGT00940000161670.f ENSGT00940000154117.d.h.a.b.a ENSGT00940000154117.d.h.a.b.b ENSGT00940000162522 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.H ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.c.a.b ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.f ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 Macaca_a ANCESTRAL SPECIES 1 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000154117.d.h.a.a.c.b ENSGT00940000161670.f ENSGT00940000154117.d.h.a.b.a ENSGT00940000154117.d.h.a.b.b ENSGT00940000162522 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.H ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.c.a.b ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.f ENSGT00940000154363.A ENSGT00940000161180 ENSGT00390000010549 ENSGT00940000160476 Rhesus DUPLICATION Rhesus MODERN SPECIES 10 ITPKC (ENSMMUG00000017706) ACTMAP (ENSMMUG00000017708) SNRPA (ENSMMUG00000022024) ENSMMUG00000004813 EGLN2 (ENSMMUG00000001197) CYP2A24 (ENSMMUG00000059147) ENSMMUG00000028756 ENSMMUG00000049359 CYP2A29 (ENSMMUG00000063763) CYP2S1 (ENSMMUG00000009608) AXL (ENSMMUG00000009145) HNRNPUL1 (ENSMMUG00000008139) CCDC97 (ENSMMUG00000008143) TGFB1 (ENSMMUG00000008142) B9D2 (ENSMMUG00000064979) TMEM91 (ENSMMUG00000014346) ##22 EXOSC5 (ENSMMUG00000014345) B3GNT8 (ENSMMUG00000014347) ENSMMUG00000014348 CEACAM4 (ENSMMUG00000013422) CEACAM7 (ENSMMUG00000059229) CEACAM5 (ENSMMUG00000018103) LYPD4 (ENSMMUG00000013425) DMRTC2 (ENSMMUG00000013426) RPS19 (ENSMMUG00000013429) CD79A (ENSMMUG00000047772) ARHGEF1 (ENSMMUG00000022305) ENSMMUG00000022309 RABAC1 (ENSMMUG00000017426) ATP1A3 (ENSMMUG00000017427) GRIK5 (ENSMMUG00000017431) Rhesus MODERN SPECIES 85 ENSMMUG00000052114 ##22 ENSMMUG00000050194 ENSMMUG00000051166 Crab-eating macaque MODERN SPECIES 10 ENSMFAG00000045934 CYP2A24 (ENSMFAG00000037343) CYP2A23 (ENSMFAG00000042150) CYP2B6 (ENSMFAG00000037028) CYP2G2 (ENSMFAG00000039779) CYP2A13 (ENSMFAG00000032459) CYP2F1 (ENSMFAG00000048408) CYP2S1 (ENSMFAG00000044440) AXL (ENSMFAG00000039691) HNRNPUL1 (ENSMFAG00000034257) CCDC97 (ENSMFAG00000002660) TGFB1 (ENSMFAG00000040753) TMEM91 (ENSMFAG00000032068) B9D2 (ENSMFAG00000031118) EXOSC5 (ENSMFAG00000045851) BCKDHA (ENSMFAG00000041490) ##22 DMAC2 (ENSMFAG00000002485) B3GNT8 (ENSMFAG00000026005) ERICH4 (ENSMFAG00000054258) ENSMFAG00000048741 CEACAM7 (ENSMFAG00000035749) ENSMFAG00000040142 ENSMFAG00000057784 ENSMFAG00000001284 LYPD4 (ENSMFAG00000039631) ENSMFAG00000049321 DMRTC2 (ENSMFAG00000045593) ENSMFAG00000049391 ENSMFAG00000045611 CD79A (ENSMFAG00000001013) ARHGEF1 (ENSMFAG00000032261) Pig-tailed macaque MODERN SPECIES 218 CYP2A24 (ENSMNEG00000028545) ENSMNEG00000044731 CYP2B6 (ENSMNEG00000043808) ENSMNEG00000041048 ENSMNEG00000040151 CYP2F1 (ENSMNEG00000033051) CYP2S1 (ENSMNEG00000033152) AXL (ENSMNEG00000002275) HNRNPUL1 (ENSMNEG00000035264) CCDC97 (ENSMNEG00000039446) TGFB1 (ENSMNEG00000042874) B9D2 (ENSMNEG00000042558) TMEM91 (ENSMNEG00000033232) EXOSC5 (ENSMNEG00000044403) B3GNT8 (ENSMNEG00000027933) BCKDHA (ENSMNEG00000032036) ##22 DMAC2 (ENSMNEG00000042723) ERICH4 (ENSMNEG00000031017) CEACAM4 (ENSMNEG00000041800) CEACAM7 (ENSMNEG00000038216) ENSMNEG00000035690 ENSMNEG00000031151 ENSMNEG00000041008 LYPD4 (ENSMNEG00000030179) DMRTC2 (ENSMNEG00000030925) RPS19 (ENSMNEG00000012619) CD79A (ENSMNEG00000043118) ARHGEF1 (ENSMNEG00000028757) ERFL (ENSMNEG00000033425) RABAC1 (ENSMNEG00000041557) ATP1A3 (ENSMNEG00000032260) Cercopithecinae_b ANCESTRAL SPECIES 24 ENSGT00940000161670.f ENSGT00940000154117.d.h.a.a.c.a ENSGT00940000154117.d.h.a.b.a ENSGT00940000157162.c.b ENSGT00940000161670.e ENSGT00940000154117.d.h.a.b.b ENSGT00940000162522 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.c.a.b ENSGT01100000263479.D.a.c.a.a.a.a.d ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 Cercopithecinae_d ANCESTRAL SPECIES 84 ENSGT00940000154117.d.h.a.a.c.a ENSGT00940000154117.d.h.a.a.d ENSGT00940000154117.d.h.a.b.a ENSGT00940000157162.c.b ENSGT00940000161670.e ENSGT00940000154117.d.h.a.b.b ENSGT00940000162522 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.c.a.b ENSGT01100000263479.D.a.c.a.a.a.a.d ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 Drill MODERN SPECIES 126 CYP2A26 (ENSMLEG00000043424) CYP2A24 (ENSMLEG00000007365) CYP2A23 (ENSMLEG00000030614) CYP2B6 (ENSMLEG00000042777) CYP2A13 (ENSMLEG00000033650) CYP2F1 (ENSMLEG00000028068) CYP2S1 (ENSMLEG00000037155) AXL (ENSMLEG00000036847) HNRNPUL1 (ENSMLEG00000024704) CCDC97 (ENSMLEG00000031400) TGFB1 (ENSMLEG00000010357) B9D2 (ENSMLEG00000004468) TMEM91 (ENSMLEG00000041286) EXOSC5 (ENSMLEG00000042915) B3GNT8 (ENSMLEG00000027547) BCKDHA (ENSMLEG00000009924) ##22 DMAC2 (ENSMLEG00000033729) ERICH4 (ENSMLEG00000041331) CEACAM7 (ENSMLEG00000033089) ENSMLEG00000002473 ENSMLEG00000030365 ENSMLEG00000023558 LYPD4 (ENSMLEG00000033535) DMRTC2 (ENSMLEG00000024359) RPS19 (ENSMLEG00000031613) CD79A (ENSMLEG00000044014) ARHGEF1 (ENSMLEG00000028557) ERFL (ENSMLEG00000041558) RABAC1 (ENSMLEG00000036383) ATP1A3 (ENSMLEG00000008811) ENSMLEG00000030091 Sooty mangabey MODERN SPECIES 274 CYP2A24 (ENSCATG00000009758) ENSCATG00000033171 CYP2A23 (ENSCATG00000030918) CYP2B6 (ENSCATG00000040415) CYP2G2 (ENSCATG00000037964) CYP2A13 (ENSCATG00000032445) CYP2F1 (ENSCATG00000035436) CYP2S1 (ENSCATG00000038377) AXL (ENSCATG00000030318) HNRNPUL1 (ENSCATG00000039807) CCDC97 (ENSCATG00000011427) TGFB1 (ENSCATG00000028350) TMEM91 (ENSCATG00000039689) B9D2 (ENSCATG00000042010) EXOSC5 (ENSCATG00000044084) BCKDHA (ENSCATG00000015892) ##22 B3GNT8 (ENSCATG00000020861) DMAC2 (ENSCATG00000043720) ERICH4 (ENSCATG00000030117) CEACAM4 (ENSCATG00000034908) CEACAM7 (ENSCATG00000039928) ENSCATG00000036441 ENSCATG00000012274 ENSCATG00000027621 LYPD4 (ENSCATG00000034011) DMRTC2 (ENSCATG00000037958) RPS19 (ENSCATG00000033159) CD79A (ENSCATG00000012116) ARHGEF1 (ENSCATG00000031490) ERFL (ENSCATG00000030550) RABAC1 (ENSCATG00000041833) Olive baboon MODERN SPECIES 12 SNRPA (ENSPANG00000023874) MIA (ENSPANG00000007225) RAB4B (ENSPANG00000012031) EGLN2 (ENSPANG00000007894) CYP2G2 (ENSPANG00000011602) CYP2B6 (ENSPANG00000002668) ENSPANG00000050583 CYP2S1 (ENSPANG00000016669) AXL (ENSPANG00000015478) HNRNPUL1 (ENSPANG00000009467) CCDC97 (ENSPANG00000007096) TGFB1 (ENSPANG00000010720) B9D2 (ENSPANG00000010100) TMEM91 (ENSPANG00000009466) EXOSC5 (ENSPANG00000004945) BCKDHA (ENSPANG00000005274) ##22 B3GNT8 (ENSPANG00000004864) DMAC2 (ENSPANG00000014011) ERICH4 (ENSPANG00000024551) CEACAM4 (ENSPANG00000010965) CEACAM7 (ENSPANG00000033278) ENSPANG00000014708 ENSPANG00000033396 ENSPANG00000024739 LYPD4 (ENSPANG00000005404) DMRTC2 (ENSPANG00000015477) ENSPANG00000008041 CD79A (ENSPANG00000013982) ARHGEF1 (ENSPANG00000011864) ERFL (ENSPANG00000025406) RABAC1 (ENSPANG00000003146) Rhinopithecus ANCESTRAL SPECIES 7 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d.h.a.a.c ENSGT00940000157162.c.b.m ENSGT00940000161670 ENSGT00940000154117.d.h.a.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT01100000263479.D.a.c.a.a.a.a.c.a.b ENSGT01100000263479.D.a.c.a.a.a.a.d ENSGT01100000263479.H ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 Black snub-nosed monkey MODERN SPECIES 709 ENSRBIG00000030791 ENSRBIG00000040003 CYP2B6 (ENSRBIG00000028968) ENSRBIG00000038380 CYP2S1 (ENSRBIG00000036513) AXL (ENSRBIG00000031521) HNRNPUL1 (ENSRBIG00000036625) CCDC97 (ENSRBIG00000042528) TGFB1 (ENSRBIG00000027053) TMEM91 (ENSRBIG00000043511) B9D2 (ENSRBIG00000036360) EXOSC5 (ENSRBIG00000040585) BCKDHA (ENSRBIG00000032180) ##22 B3GNT8 (ENSRBIG00000021719) DMAC2 (ENSRBIG00000036774) ERICH4 (ENSRBIG00000034490) Golden snub-nosed monkey MODERN SPECIES 2238 ENSRROG00000036608 CYP2F1 (ENSRROG00000020038) ENSRROG00000025141 CYP2B6 (ENSRROG00000033916) ENSRROG00000003707 ENSRROG00000028726 CYP2S1 (ENSRROG00000036648) AXL (ENSRROG00000037506) HNRNPUL1 (ENSRROG00000030124) CCDC97 (ENSRROG00000043217) TGFB1 (ENSRROG00000043252) B9D2 (ENSRROG00000045621) TMEM91 (ENSRROG00000042633) EXOSC5 (ENSRROG00000044020) B3GNT8 (ENSRROG00000010049) BCKDHA (ENSRROG00000040298) ##22 DMAC2 (ENSRROG00000037468) ERICH4 (ENSRROG00000029222) CEACAM4 (ENSRROG00000040192) ENSRROG00000035992 ENSRROG00000041826 ENSRROG00000033650 LYPD4 (ENSRROG00000042021) DMRTC2 (ENSRROG00000040893) RPS19 (ENSRROG00000022139) CD79A (ENSRROG00000039224) ARHGEF1 (ENSRROG00000037345) ERFL (ENSRROG00000044745) Platyrrhini ANCESTRAL SPECIES 20 ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.b.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549.b ENSGT00940000160476 ENSGT00940000158852 ENSGT00940000161799.b Cebidae ANCESTRAL SPECIES 8 ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.b.a ENSGT01100000263479.D.a.c.a.a.a.a.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549.b ENSGT00940000160476 ENSGT00940000158852 Marmoset MODERN SPECIES 14 EGLN2 (ENSCJAG00000014887) CYP2F1 (ENSCJAG00000034902) ENSCJAG00000079630 CYP2A7 (ENSCJAG00000036060) ENSCJAG00000020079 ENSCJAG00000075960 CYP2B6 (ENSCJAG00000020082) CYP2S1 (ENSCJAG00000020085) AXL (ENSCJAG00000020090) HNRNPUL1 (ENSCJAG00000020106) CCDC97 (ENSCJAG00000046949) TGFB1 (ENSCJAG00000020149) B9D2 (ENSCJAG00000045008) TMEM91 (ENSCJAG00000022834) EXOSC5 (ENSCJAG00000020152) BCKDHA (ENSCJAG00000020155) ##22 B3GNT8 (ENSCJAG00000039694) DMAC2 (ENSCJAG00000020190) ERICH4 (ENSCJAG00000020204) CEACAM7 (ENSCJAG00000020206) ENSCJAG00000037018 LYPD4 (ENSCJAG00000020234) DMRTC2 (ENSCJAG00000020238) ENSCJAG00000020243 CD79A (ENSCJAG00000020247) ARHGEF1 (ENSCJAG00000020252) ERFL (ENSCJAG00000020277) RABAC1 (ENSCJAG00000012607) ATP1A3 (ENSCJAG00000012623) GRIK5 (ENSCJAG00000012725) ZNF574 (ENSCJAG00000043982) Cebidae_a ANCESTRAL SPECIES 55 ENSGT00950000182767.b.a.b.b.b ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.a.a.b ENSGT01100000263479.D.a.c.a.a.a.a.b.a ENSGT01100000263479.D.a.c.a.a.a.a.a ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.e.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549.b ENSGT00940000160476 ENSGT00940000158852 Bolivian squirrel monkey MODERN SPECIES 218 MIA (ENSSBOG00000028413) RAB4B (ENSSBOG00000020453) EGLN2 (ENSSBOG00000024733) CYP2F1 (ENSSBOG00000031960) ENSSBOG00000035391 CYP2G2 (ENSSBOG00000031464) CYP2B6 (ENSSBOG00000023615) CYP2S1 (ENSSBOG00000028351) AXL (ENSSBOG00000025547) HNRNPUL1 (ENSSBOG00000035512) CCDC97 (ENSSBOG00000026019) TGFB1 (ENSSBOG00000018571) B9D2 (ENSSBOG00000023666) TMEM91 (ENSSBOG00000025978) EXOSC5 (ENSSBOG00000031753) BCKDHA (ENSSBOG00000010138) ##22 DMAC2 (ENSSBOG00000020596) ERICH4 (ENSSBOG00000029315) CEACAM7 (ENSSBOG00000022180) ENSSBOG00000022104 ENSSBOG00000031490 LYPD4 (ENSSBOG00000033436) DMRTC2 (ENSSBOG00000016003) RPS19 (ENSSBOG00000026946) CD79A (ENSSBOG00000026660) ARHGEF1 (ENSSBOG00000034166) ERFL (ENSSBOG00000028753) RABAC1 (ENSSBOG00000018697) ATP1A3 (ENSSBOG00000026931) GRIK5 (ENSSBOG00000022110) ZNF574 (ENSSBOG00000027597) Capuchin MODERN SPECIES 306 MIA (ENSCCAG00000038106) RAB4B (ENSCCAG00000029018) EGLN2 (ENSCCAG00000036438) CYP2F1 (ENSCCAG00000025947) CYP2A6 (ENSCCAG00000018017) CYP2G2 (ENSCCAG00000036488) CYP2B6 (ENSCCAG00000029752) ENSCCAG00000020574 AXL (ENSCCAG00000025132) HNRNPUL1 (ENSCCAG00000038049) CCDC97 (ENSCCAG00000035539) TGFB1 (ENSCCAG00000031038) B9D2 (ENSCCAG00000029011) TMEM91 (ENSCCAG00000030736) EXOSC5 (ENSCCAG00000013179) BCKDHA (ENSCCAG00000031671) ##22 B3GNT8 (ENSCCAG00000005282) DMAC2 (ENSCCAG00000036852) ERICH4 (ENSCCAG00000037119) CEACAM7 (ENSCCAG00000023911) ENSCCAG00000023866 ENSCCAG00000038050 LYPD4 (ENSCCAG00000030413) DMRTC2 (ENSCCAG00000019056) RPS19 (ENSCCAG00000033416) CD79A (ENSCCAG00000037944) ARHGEF1 (ENSCCAG00000036552) ERFL (ENSCCAG00000030582) RABAC1 (ENSCCAG00000031894) ATP1A3 (ENSCCAG00000034309) GRIK5 (ENSCCAG00000037408) Mas night monkey MODERN SPECIES 472 MIA (ENSANAG00000022656) RAB4B (ENSANAG00000022021) ENSANAG00000026190 CYP2F1 (ENSANAG00000036840) CYP2A6 (ENSANAG00000021277) CYP2G2 (ENSANAG00000023354) CYP2B6 (ENSANAG00000030366) CYP2S1 (ENSANAG00000024322) AXL (ENSANAG00000029199) HNRNPUL1 (ENSANAG00000027262) CCDC97 (ENSANAG00000033013) TGFB1 (ENSANAG00000035874) B9D2 (ENSANAG00000033996) TMEM91 (ENSANAG00000024959) EXOSC5 (ENSANAG00000022449) BCKDHA (ENSANAG00000030113) ##22 B3GNT8 (ENSANAG00000019705) DMAC2 (ENSANAG00000020514) ERICH4 (ENSANAG00000034468) CEACAM7 (ENSANAG00000023773) ENSANAG00000020658 LYPD4 (ENSANAG00000029410) DMRTC2 (ENSANAG00000033057) RPS19 (ENSANAG00000036544) CD79A (ENSANAG00000034787) ARHGEF1 (ENSANAG00000020006) ERFL (ENSANAG00000027041) ENSANAG00000019937 ATP1A3 (ENSANAG00000023145) GRIK5 (ENSANAG00000038058) ZNF574 (ENSANAG00000034608) Tarsier MODERN SPECIES 4540 B9D2 (ENSTSYG00000026854) TMEM91 (ENSTSYG00000032092) EXOSC5 (ENSTSYG00000014183) BCKDHA (ENSTSYG00000006209) ##22 DMAC2 (ENSTSYG00000030666) ERICH4 (ENSTSYG00000034517) Strepsirrhini ANCESTRAL SPECIES 34 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 Lemuriformes ANCESTRAL SPECIES 29 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 Mouse lemur MODERN SPECIES 14 EGLN2 (ENSMICG00000028495) CYP2T1 (ENSMICG00000038359) CYP2F1 (ENSMICG00000031763) CYP2A13P (ENSMICG00000017011) CYP2G2 (ENSMICG00000002036) CYP2B65 (ENSMICG00000031057) CYP2B6 (ENSMICG00000003926) CYP2S1 (ENSMICG00000037054) AXL (ENSMICG00000011258) HNRNPUL1 (ENSMICG00000001989) CCDC97 (ENSMICG00000046139) TGFB1 (ENSMICG00000034161) B9D2 (ENSMICG00000027358) TMEM91 (ENSMICG00000045784) EXOSC5 (ENSMICG00000002016) BCKDHA (ENSMICG00000002010) ##22 DMAC2 (ENSMICG00000033752) ERICH4 (ENSMICG00000033248) ENSMICG00000045867 NLRP9 (ENSMICG00000016072) ENSMICG00000043184 NLRP11 (ENSMICG00000045838) NLRP4 (ENSMICG00000046855) NLRP8 (ENSMICG00000008877) ENSMICG00000036687 CTU1 (ENSMICG00000047541) KLK14 (ENSMICG00000030326) KLK13 (ENSMICG00000016905) KLK12 (ENSMICG00000016902) KLK11 (ENSMICG00000016897) KLK10 (ENSMICG00000045357) Lemuriformes_a ANCESTRAL SPECIES 54 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 Greater bamboo lemur MODERN SPECIES 2611 BCKDHA (ENSPSMG00000003944) ##22 Coquerels sifaka MODERN SPECIES 689 CYP2A13 (ENSPCOG00000006739) ENSPCOG00000020425 CYP2G2 (ENSPCOG00000009276) CYP2B62 (ENSPCOG00000023728) ENSPCOG00000028349 CYP2B65 (ENSPCOG00000023457) CYP2B6 (ENSPCOG00000026478) CYP2S1 (ENSPCOG00000024803) AXL (ENSPCOG00000023956) HNRNPUL1 (ENSPCOG00000020358) CCDC97 (ENSPCOG00000024155) TGFB1 (ENSPCOG00000023659) B9D2 (ENSPCOG00000020226) TMEM91 (ENSPCOG00000023599) EXOSC5 (ENSPCOG00000020582) BCKDHA (ENSPCOG00000021247) ##22 DMAC2 (ENSPCOG00000013019) ERICH4 (ENSPCOG00000025262) Bushbaby MODERN SPECIES 348 CYP2T1 (ENSOGAG00000032352) CYP2A13 (ENSOGAG00000008214) CYP2G2 (ENSOGAG00000005443) ENSOGAG00000029171 CYP2B6 (ENSOGAG00000031280) ENSOGAG00000001834 ENSOGAG00000024605 CYP2S1 (ENSOGAG00000001431) AXL (ENSOGAG00000013390) HNRNPUL1 (ENSOGAG00000013395) CCDC97 (ENSOGAG00000026782) TGFB1 (ENSOGAG00000029924) B9D2 (ENSOGAG00000033489) TMEM91 (ENSOGAG00000032735) EXOSC5 (ENSOGAG00000016075) BCKDHA (ENSOGAG00000016071) ##22 B3GNT8 (ENSOGAG00000011578) DMAC2 (ENSOGAG00000028355) Euarchontoglires_A ANCESTRAL SPECIES 7 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT00390000002861 ENSGT00940000171483 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 Tree shrew MODERN SPECIES 2049 ENSTBEG00000006796 ##22 EXOSC5 (ENSTBEG00000007203) B3GNT8 (ENSTBEG00000007747) Glires ANCESTRAL SPECIES 6 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.d ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b ENSGT00390000002861 ENSGT00940000171483 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 Lagomorpha ANCESTRAL SPECIES 152 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00390000006319 ENSGT00940000160500 ENSGT01100000263479.D.a.c.a ENSGT00390000002861 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Rabbit MODERN SPECIES 522 ENSOCUG00000033130 ENSOCUG00000022951 CYP2S1 (ENSOCUG00000000829) AXL (ENSOCUG00000016651) HNRNPUL1 (ENSOCUG00000016666) CCDC97 (ENSOCUG00000016682) ENSOCUG00000008485 B9D2 (ENSOCUG00000008000) ENSOCUG00000016689 ENSOCUG00000036520 ENSOCUG00000035725 ENSOCUG00000029964 ENSOCUG00000030402 ENSOCUG00000036063 EXOSC5 (ENSOCUG00000011497) BCKDHA (ENSOCUG00000023789) ##22 B3GNT8 (ENSOCUG00000027388) ERICH4 (ENSOCUG00000029714) DMAC2 (ENSOCUG00000029322) ENSOCUG00000008689 CXCL17 (ENSOCUG00000021666) ENSOCUG00000035805 LIPE (ENSOCUG00000000017) CNFN (ENSOCUG00000006494) ENSOCUG00000006479 TMEM145 (ENSOCUG00000004380) PRR19 (ENSOCUG00000023652) PAFAH1B3 (ENSOCUG00000006470) CIC (ENSOCUG00000006458) ERF (ENSOCUG00000039541) GSK3A (ENSOCUG00000006441) Pika MODERN SPECIES 1752 BCKDHA (ENSOPRG00000011434) ##22 ENSOPRG00000011445 ENSOPRG00000011453 ENSOPRG00000011457 Rodentia ANCESTRAL SPECIES 8 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.c.b.a ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.b ENSGT00390000002861 ENSGT00940000171483 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 Rodentia_A ANCESTRAL SPECIES 6 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.c.b.a.h ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000161658 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.a ENSGT01100000263479.D.a.c.b.a.b ENSGT00390000002861 ENSGT00940000171483 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 Hystricomorpha ANCESTRAL SPECIES 2 ENSGT00940000162522 ENSGT00940000154117.c.b.b.b ENSGT00940000154117.c.b.a.h ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000161658 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.b ENSGT00390000002861 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 Naked mole-rat female MODERN SPECIES 21 ENSHGLG00000003471 ENSHGLG00000003316 ENSHGLG00000002629 ENSHGLG00000003636 ENSHGLG00000003068 ENSHGLG00000042272 ENSHGLG00000011476 CYP2S1 (ENSHGLG00000005323) AXL (ENSHGLG00000018919) HNRNPUL1 (ENSHGLG00000007171) CCDC97 (ENSHGLG00000035865) TGFB1 (ENSHGLG00000007211) B9D2 (ENSHGLG00000005896) TMEM91 (ENSHGLG00000036227) EXOSC5 (ENSHGLG00000008975) BCKDHA (ENSHGLG00000050952) ##22 B3GNT8 (ENSHGLG00000010364) ERICH4 (ENSHGLG00000048703) ENSHGLG00000011199 ENSHGLG00000009638 ATP5SL (ENSHGLG00000039004) LIPE (ENSHGLG00000002222) CNFN (ENSHGLG00000046457) MEGF8 (ENSHGLG00000010524) TMEM145 (ENSHGLG00000010011) PRR19 (ENSHGLG00000003163) PAFAH1B3 (ENSHGLG00000003652) CIC (ENSHGLG00000019229) ERF (ENSHGLG00000003539) GSK3A (ENSHGLG00000004094) ZNF526 (ENSHGLG00000002054) Hystricomorpha_a ANCESTRAL SPECIES 39 ENSGT00940000162522 ENSGT00940000154117.c.b.b.b ENSGT00940000154117.c.b.a.h ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000157162.c.b ENSGT00940000161658 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.a ENSGT00390000002861 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 Guinea pig MODERN SPECIES 157 CYP2F1 (ENSCPOG00000037474) ENSCPOG00000032245 ENSCPOG00000021169 ENSCPOG00000038528 ENSCPOG00000013027 CYP2B6 (ENSCPOG00000024851) ENSCPOG00000011200 CYP2S1 (ENSCPOG00000007464) AXL (ENSCPOG00000008093) ENSCPOG00000008101 CCDC97 (ENSCPOG00000036545) TGFB1 (ENSCPOG00000001214) B9D2 (ENSCPOG00000019498) TMEM91 (ENSCPOG00000036778) EXOSC5 (ENSCPOG00000035731) BCKDHA (ENSCPOG00000000333) ##22 B3GNT8 (ENSCPOG00000009602) DMAC2 (ENSCPOG00000022095) ERICH4 (ENSCPOG00000030569) ENSCPOG00000001970 ENSCPOG00000035298 Hystricomorpha_b ANCESTRAL SPECIES 49 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.a ENSGT00390000002861 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b ENSGT00940000162624 Degu MODERN SPECIES 443 ENSODEG00000000391 ENSODEG00000018549 CYP2S1 (ENSODEG00000000281) AXL (ENSODEG00000001055) HNRNPUL1 (ENSODEG00000000913) CCDC97 (ENSODEG00000000743) TGFB1 (ENSODEG00000000721) B9D2 (ENSODEG00000000668) TMEM91 (ENSODEG00000000454) EXOSC5 (ENSODEG00000000427) BCKDHA (ENSODEG00000000379) ##22 B3GNT8 (ENSODEG00000018602) DMAC2 (ENSODEG00000000351) ERICH4 (ENSODEG00000000339) Long-tailed chinchilla MODERN SPECIES 262 CYP2S1 (ENSCLAG00000001416) AXL (ENSCLAG00000001659) HNRNPUL1 (ENSCLAG00000000985) CCDC97 (ENSCLAG00000001171) TGFB1 (ENSCLAG00000001227) B9D2 (ENSCLAG00000000822) TMEM91 (ENSCLAG00000000996) EXOSC5 (ENSCLAG00000001186) BCKDHA (ENSCLAG00000000736) ##22 B3GNT8 (ENSCLAG00000001017) DMAC2 (ENSCLAG00000001090) ERICH4 (ENSCLAG00000000843) ENSCLAG00000001267 CXCL17 (ENSCLAG00000001312) LIPE (ENSCLAG00000001355) CNFN (ENSCLAG00000001511) MEGF8 (ENSCLAG00000002648) TMEM145 (ENSCLAG00000003087) PRR19 (ENSCLAG00000000685) PAFAH1B3 (ENSCLAG00000000723) CIC (ENSCLAG00000000862) ERF (ENSCLAG00000002511) GSK3A (ENSCLAG00000002825) ZNF526 (ENSCLAG00000002951) Sciuridae ANCESTRAL SPECIES 5 ENSGT00940000159399 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.c.b.a.h ENSGT00940000157162.c.b ENSGT00940000161658.j ENSGT00940000162131 ENSGT00940000160232.t ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h.b ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C.d ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.a ENSGT01100000263479.D.a.c.b.a.b ENSGT00390000002861 ENSGT00940000171483 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 Marmotini ANCESTRAL SPECIES 7 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.c.b.a.h ENSGT00940000161670 ENSGT00940000154117.d.n ENSGT00940000161658.j ENSGT00940000157162.d ENSGT00940000162131 ENSGT00940000160232.t ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h.b ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C.d ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.b.b ENSGT01100000263479.D.a.c.b.a.b ENSGT00390000002861 ENSGT00940000171483 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 Marmotini_b ANCESTRAL SPECIES 47 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.c.b.a.h ENSGT00940000161670 ENSGT00940000154117.c.b.a.g ENSGT00940000161658.j ENSGT00940000157162.d ENSGT00940000162131 ENSGT00940000160232.t ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h.b ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C.d ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 Squirrel MODERN SPECIES 261 ENSSTOG00000026309 ENSSTOG00000002073 ENSSTOG00000029824 ENSSTOG00000027252 ENSSTOG00000027460 ENSSTOG00000028564 ENSSTOG00000020560 CYP2S1 (ENSSTOG00000021631) AXL (ENSSTOG00000001595) HNRNPUL1 (ENSSTOG00000001605) CCDC97 (ENSSTOG00000027591) TGFB1 (ENSSTOG00000009895) B9D2 (ENSSTOG00000026487) TMEM91 (ENSSTOG00000024411) EXOSC5 (ENSSTOG00000019738) BCKDHA (ENSSTOG00000015862) ##22 B3GNT8 (ENSSTOG00000023088) ENSSTOG00000034232 ERICH4 (ENSSTOG00000022757) Arctic ground squirrel MODERN SPECIES 821 ENSUPAG00010010459 CYP2S1 (ENSUPAG00010010525) AXL (ENSUPAG00010010539) HNRNPUL1 (ENSUPAG00010010562) CCDC97 (ENSUPAG00010010592) TGFB1 (ENSUPAG00010010599) B9D2 (ENSUPAG00010010605) TMEM91 (ENSUPAG00010010613) EXOSC5 (ENSUPAG00010010628) BCKDHA (ENSUPAG00010010634) ##22 B3GNT8 (ENSUPAG00010010648) DMAC2 (ENSUPAG00010010651) ERICH4 (ENSUPAG00010010664) Alpin marmot MODERN SPECIES 45 ENSMMMG00000019828 ENSMMMG00000019794 ENSMMMG00000019786 ENSMMMG00000019784 ENSMMMG00000019767 ENSMMMG00000019751 CYP2S1 (ENSMMMG00000019736) AXL (ENSMMMG00000019704) ENSMMMG00000019697 HNRNPUL1 (ENSMMMG00000019676) CCDC97 (ENSMMMG00000019668) ENSMMMG00000019666 B9D2 (ENSMMMG00000019659) TMEM91 (ENSMMMG00000019656) EXOSC5 (ENSMMMG00000019654) BCKDHA (ENSMMMG00000019648) ##22 B3GNT8 (ENSMMMG00000019646) DMAC2 (ENSMMMG00000019632) ERICH4 (ENSMMMG00000019627) ENSMMMG00000019076 ENSMMMG00000018966 CXCL17 (ENSMMMG00000018960) ENSMMMG00000018958 ENSMMMG00000018948 LIPE (ENSMMMG00000018935) CNFN (ENSMMMG00000018928) MEGF8 (ENSMMMG00000018897) TMEM145 (ENSMMMG00000018870) ENSMMMG00000018865 PRR19 (ENSMMMG00000018862) PAFAH1B3 (ENSMMMG00000018822) Eurasian red squirrel MODERN SPECIES 8 ENSSVLG00005020061 ENSSVLG00005021415 ENSSVLG00005021585 ENSSVLG00005022091 ENSSVLG00005022193 CYP2B6 (ENSSVLG00005022273) ENSSVLG00005022385 CYP2S1 (ENSSVLG00005022437) AXL (ENSSVLG00005022539) HNRNPUL1 (ENSSVLG00005022848) CCDC97 (ENSSVLG00005023156) TGFB1 (ENSSVLG00005023197) B9D2 (ENSSVLG00005023235) TMEM91 (ENSSVLG00005023275) ENSSVLG00005023388 BCKDHA (ENSSVLG00005023470) ##22 B3GNT8 (ENSSVLG00005023527) DMAC2 (ENSSVLG00005023559) ERICH4 (ENSSVLG00005023663) ENSSVLG00005023751 ENSSVLG00005024022 ENSSVLG00005024078 CXCL17 (ENSSVLG00005024192) ENSSVLG00005024214 LIPE (ENSSVLG00005024237) CNFN (ENSSVLG00005024319) MEGF8 (ENSSVLG00005024356) TMEM145 (ENSSVLG00005024411) PRR19 (ENSSVLG00005024445) PAFAH1B3 (ENSSVLG00005024469) CIC (ENSSVLG00005024515) Rodentia_B ANCESTRAL SPECIES 20 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.c.b.a ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000161658 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.b ENSGT01100000263479.D.a.c.b.a.a ENSGT00390000002861 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 Kangaroo rat MODERN SPECIES 557 ENSDORG00000001302 Cyp2g1 (ENSDORG00000028192) Axl (ENSDORG00000003600) Hnrnpul1 (ENSDORG00000003603) Ccdc97 (ENSDORG00000003606) ENSDORG00000003607 B9d2 (ENSDORG00000003608) Exosc5 (ENSDORG00000003611) Bckdha (ENSDORG00000003609) ##22 Psmc4 (ENSDORG00000006475) Fbl (ENSDORG00000005756) Dyrk1b (ENSDORG00000005757) Eid2 (ENSDORG00000029053) Dll3 (ENSDORG00000001125) Supt5 (ENSDORG00000016582) Rps16 (ENSDORG00000005000) ENSDORG00000009096 Zfp36 (ENSDORG00000013487) Med29 (ENSDORG00000013486) Samd4b (ENSDORG00000013482) Gmfg (ENSDORG00000004256) Lrfn1 (ENSDORG00000026509) Myomorpha ANCESTRAL SPECIES 20 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.c.b.a ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000161658 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.b ENSGT00390000002861 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Lesser Egyptian jerboa MODERN SPECIES 186 Irgq (ENSJJAG00000022079) Zfp428 (ENSJJAG00000022431) Cadm4 (ENSJJAG00000022693) Smg9 (ENSJJAG00000023462) ENSJJAG00000023906 ENSJJAG00000024260 Cyp2s1 (ENSJJAG00000000419) ENSJJAG00000007068 Axl (ENSJJAG00000010305) Hnrnpul1 (ENSJJAG00000011986) Ccdc97 (ENSJJAG00000012509) Tgfb1 (ENSJJAG00000012855) B9d2 (ENSJJAG00000013160) Tmem91 (ENSJJAG00000013371) Exosc5 (ENSJJAG00000013914) Bckdha (ENSJJAG00000014599) ##22 B3gnt8 (ENSJJAG00000013842) Dmac2 (ENSJJAG00000015253) Erich4 (ENSJJAG00000015588) Lypd4 (ENSJJAG00000015698) Dmrtc2 (ENSJJAG00000016059) ENSJJAG00000016317 Cd79a (ENSJJAG00000016983) Arhgef1 (ENSJJAG00000019422) Erfl (ENSJJAG00000003327) Atp1a3 (ENSJJAG00000012190) Grik5 (ENSJJAG00000015626) Zfp574 (ENSJJAG00000021785) Pou2f2 (ENSJJAG00000022155) ENSJJAG00000022418 Zfp526 (ENSJJAG00000014793) Muroidea ANCESTRAL SPECIES 18 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.c.b.a ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000161658 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.b ENSGT00390000002861 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Muroidea_A ANCESTRAL SPECIES 20 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162522 ENSGT00940000154117.c.b.a ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000161658 ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.b ENSGT00390000002861 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Cricetidae ANCESTRAL SPECIES 26 ENSGT00940000162522 ENSGT00940000154117.c.b.b.a ENSGT00940000154117.c.b.a ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000161658.e.a ENSGT00940000161658.f ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.a ENSGT00530000063351.a.a.z ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.f.o.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 ENSGT00940000160476 ENSGT00940000158852 ENSGT00940000161799 Cricetidae_B ANCESTRAL SPECIES 25 ENSGT00940000162522 ENSGT00940000154117.c.b.b.a ENSGT00940000154117.c.b.a ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000161658.e.a ENSGT00940000161658.f ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 Northern American deer mouse MODERN SPECIES ENSPEMG00000026398 ENSPEMG00000026969 ENSPEMG00000025450 ENSPEMG00000028608 ENSPEMG00000028514 ENSPEMG00000028153 ENSPEMG00000024898 Cyp2s1 (ENSPEMG00000015924) Axl (ENSPEMG00000008484) Hnrnpul1 (ENSPEMG00000009618) Ccdc97 (ENSPEMG00000011083) Tgfb1 (ENSPEMG00000016409) B9d2 (ENSPEMG00000027428) Tmem91 (ENSPEMG00000016115) Exosc5 (ENSPEMG00000018589) Bckdha (ENSPEMG00000018189) ##22 B3gnt8 (ENSPEMG00000005745) Dmac2 (ENSPEMG00000010806) Erich4 (ENSPEMG00000029662) ENSPEMG00000031064 ENSPEMG00000017731 ENSPEMG00000012395 Cxcl17 (ENSPEMG00000013212) Lipe (ENSPEMG00000018430) Cnfn (ENSPEMG00000008799) Megf8 (ENSPEMG00000015992) Tmem145 (ENSPEMG00000008836) Prr19 (ENSPEMG00000017854) Pafah1b3 (ENSPEMG00000009631) Cic (ENSPEMG00000009522) Erf (ENSPEMG00000015322) Prairie vole MODERN SPECIES 354 Megf8 (ENSMOCG00000009971) Cnfn (ENSMOCG00000010534) Lipe (ENSMOCG00000004098) Cxcl17 (ENSMOCG00000013452) ENSMOCG00000002667 ENSMOCG00000017362 ENSMOCG00000002001 Cyp2s1 (ENSMOCG00000019209) Axl (ENSMOCG00000014019) Hnrnpul1 (ENSMOCG00000008200) Ccdc97 (ENSMOCG00000000596) ENSMOCG00000010017 B9d2 (ENSMOCG00000017197) Tmem91 (ENSMOCG00000000964) Exosc5 (ENSMOCG00000002379) Bckdha (ENSMOCG00000006417) ##22 B3gnt8 (ENSMOCG00000007924) Dmac2 (ENSMOCG00000018503) Erich4 (ENSMOCG00000021317) Gramd1a (ENSMOCG00000014709) Scn1b (ENSMOCG00000017430) Hpn (ENSMOCG00000011912) ENSMOCG00000013110 Lgi4 (ENSMOCG00000000539) Fxyd1 (ENSMOCG00000019244) Fxyd7 (ENSMOCG00000023018) Fxyd5 (ENSMOCG00000015934) Fam187b (ENSMOCG00000020228) Lsr (ENSMOCG00000016779) Usf2 (ENSMOCG00000015341) Hamp (ENSMOCG00000020398) Cricetinae ANCESTRAL SPECIES 34 ENSGT00940000154117.c.b.b.a ENSGT00940000154117.c.b.a ENSGT00940000154117.c.a.a ENSGT00940000161670 ENSGT00940000161658.e.a.c ENSGT00940000161658.e.a.d ENSGT00940000161658.f.c ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT00530000063351.a.a.z ENSGT00530000063351.a.b ENSGT00940000161904 ENSGT00390000013102.f.o.b ENSGT00940000154363.A ENSGT00940000161180 ENSGT00940000163212.A ENSGT00390000010549 ENSGT00940000160476 ENSGT00940000158852 ENSGT00940000161799 ENSGT00940000160115 Chinese hamster chok1gshd MODERN SPECIES 295 ENSCGRG00001022864 ENSCGRG00001017034 ENSCGRG00001005418 ENSCGRG00001019747 ENSCGRG00001019700 ENSCGRG00001024558 ENSCGRG00001002022 Cyp2s1 (ENSCGRG00001023487) Axl (ENSCGRG00001021074) Hnrnpul1 (ENSCGRG00001015368) Ccdc97 (ENSCGRG00001013921) Tgfb1 (ENSCGRG00001016798) B9d2 (ENSCGRG00001010904) Tmem91 (ENSCGRG00001014993) Exosc5 (ENSCGRG00001017207) Bckdha (ENSCGRG00001018437) ##22 B3gnt8 (ENSCGRG00001010163) Dmac2 (ENSCGRG00001017864) Erich4 (ENSCGRG00001023074) Lypd4 (ENSCGRG00001023965) Dmrtc2 (ENSCGRG00001016626) ENSCGRG00001017202 Cd79a (ENSCGRG00001018881) Arhgef1 (ENSCGRG00001000673) Erfl (ENSCGRG00001017704) Rabac1 (ENSCGRG00001021463) Atp1a3 (ENSCGRG00001010759) Grik5 (ENSCGRG00001001142) Zfp574 (ENSCGRG00001001429) Pou2f2 (ENSCGRG00001013142) Dedd2 (ENSCGRG00001011876) Golden Hamster MODERN SPECIES 845 ENSMAUG00000001280 ENSMAUG00000015226 ENSMAUG00000020680 Cyp2g1 (ENSMAUG00000021548) ENSMAUG00000000384 ENSMAUG00000017405 ENSMAUG00000021163 ENSMAUG00000003718 Cyp2s1 (ENSMAUG00000017778) Hnrnpul1 (ENSMAUG00000020435) Ccdc97 (ENSMAUG00000009892) Tgfb1 (ENSMAUG00000003854) B9d2 (ENSMAUG00000018932) Tmem91 (ENSMAUG00000009822) Exosc5 (ENSMAUG00000010419) Bckdha (ENSMAUG00000015176) ##22 B3gnt8 (ENSMAUG00000005161) Dmac2 (ENSMAUG00000021463) Erich4 (ENSMAUG00000013488) Murinae ANCESTRAL SPECIES 19 ENSGT00940000162522 ENSGT00940000154117.c.b.a ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000161658.h.b ENSGT00940000161658.h.a.a ENSGT00940000161658.g ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.b ENSGT00390000002861 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Mus ANCESTRAL SPECIES ENSGT00940000162522 ENSGT00940000154117.c.b.a ENSGT00940000154117.c.a ENSGT00940000161670 ENSGT00940000161658.h.b ENSGT00940000161658.h.a.a ENSGT00940000161658.g ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.b ENSGT00390000002861 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Mus_A ANCESTRAL SPECIES 1 ENSGT00940000161658.h.b ENSGT00940000161658.h.a.b ENSGT00960000186612.B.a.b.a.b.a.a.a.a.a.a.g.b.a.a.b.a.a ENSGT00940000163218.h.a ENSGT00940000162284.e.a.b ENSGT00940000161658.h.a.a.d ENSGT00940000161658.g ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.b ENSGT00390000002861 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Mus_B ANCESTRAL SPECIES ENSGT00940000161658.h.a.b ENSGT00960000186612.B.a.b.a.b.a.a.a.a.a.a.g.b.a.a.b.a.a.a ENSGT00940000163218.h.a ENSGT00940000162284.e.a.b ENSGT00940000163218.h.b ENSGT00940000161658.h.a.a.d ENSGT00940000161658.g ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.b ENSGT00390000002861 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Mus_C ANCESTRAL SPECIES 15 ENSGT00940000161658.h.a.b ENSGT00960000186612.B.a.b.a.b.a.a.a.a.a.a.g.b.a.a.b.a.a.a ENSGT00940000163218.h.a ENSGT00940000162284.e.a.b ENSGT00940000163218.h.b ENSGT00940000161658.h.a.a.d ENSGT00940000161658.g ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.h ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00390000006319 ENSGT01100000263479.D.a.c.b.a.b ENSGT00390000002861 ENSGT00990000204044 ENSGT00730000111056 ENSGT00940000161202.b ENSGT00940000160262 ENSGT00940000153981.B ENSGT00390000010703 ENSGT00950000183199.a.b ENSGT00940000159960 ENSGT00940000157292 ENSGT00520000055635.c.b Steppe mouse MODERN SPECIES 2468 ENSMSIG00000025423 ENSMSIG00000025418 #21 Cyp2b10 (ENSMSIG00000025371) ENSMSIG00000025368 ENSMSIG00000025348 Cyp2s1 (ENSMSIG00000025332) Axl (ENSMSIG00000025298) Hnrnpul1 (ENSMSIG00000025250) Ccdc97 (ENSMSIG00000025236) Tgfb1 (ENSMSIG00000025220) B9d2 (ENSMSIG00000025183) ENSMSIG00000025163 Exosc5 (ENSMSIG00000025142) B3gnt8 (ENSMSIG00000025137) Bckdha (ENSMSIG00000025085) ##22 Dmac2 (ENSMSIG00000025065) Erich4 (ENSMSIG00000025058) ENSMSIG00000024790 spretus MODERN SPECIES 16 Cyp2b23 (MGP_SPRETEiJ_G0030487) MGP_SPRETEiJ_G0030486 MGP_SPRETEiJ_G0030485 Nlrp9a (MGP_SPRETEiJ_G0030484) Nlrp4a (MGP_SPRETEiJ_G0030483) Cyp2b9 (MGP_SPRETEiJ_G0030481) Cyp2b10 (MGP_SPRETEiJ_G0030480) Cyp2s1 (MGP_SPRETEiJ_G0030479) Axl (MGP_SPRETEiJ_G0030478) Hnrnpul1 (MGP_SPRETEiJ_G0030477) Ccdc97 (MGP_SPRETEiJ_G0030476) Tgfb1 (MGP_SPRETEiJ_G0030475) B9d2 (MGP_SPRETEiJ_G0030474) Tmem91 (MGP_SPRETEiJ_G0030473) Exosc5 (MGP_SPRETEiJ_G0030472) Bckdha (MGP_SPRETEiJ_G0030471) ##22 B3gnt8 (MGP_SPRETEiJ_G0030470) Dmac2 (MGP_SPRETEiJ_G0030469) Erich4 (MGP_SPRETEiJ_G0030468) MGP_SPRETEiJ_G0030467 Cxcl17 (MGP_SPRETEiJ_G0030466) Lipe (MGP_SPRETEiJ_G0030465) Cnfn (MGP_SPRETEiJ_G0030464) Megf8 (MGP_SPRETEiJ_G0030463) Tmem145 (MGP_SPRETEiJ_G0030462) Prr19 (MGP_SPRETEiJ_G0030461) Pafah1b3 (MGP_SPRETEiJ_G0030460) Cic (MGP_SPRETEiJ_G0030459) Erf (MGP_SPRETEiJ_G0030458) Gsk3a (MGP_SPRETEiJ_G0030457) Zfp526 (MGP_SPRETEiJ_G0030456) Mouse MODERN SPECIES 16 Nlrp4a (ENSMUSG00000040601) Nlrp9c (ENSMUSG00000040614) Cyp2a4 (ENSMUSG00000074254) Vmn1r184 (ENSMUSG00000046130) Cyp2b9 (ENSMUSG00000040660) Cyp2b13 (ENSMUSG00000040583) Cyp2b10 (ENSMUSG00000030483) Cyp2s1 (ENSMUSG00000040703) Axl (ENSMUSG00000002602) Hnrnpul1 (ENSMUSG00000040725) Ccdc97 (ENSMUSG00000002608) Tgfb1 (ENSMUSG00000002603) B9d2 (ENSMUSG00000063439) Tmem91 (ENSMUSG00000061702) Exosc5 (ENSMUSG00000061286) Bckdha (ENSMUSG00000060376) ##22 B3gnt8 (ENSMUSG00000059479) Dmac2 (ENSMUSG00000057229) Erich4 (ENSMUSG00000074261) Ceacam2 (ENSMUSG00000054385) Ceacam1 (ENSMUSG00000074272) Cxcl17 (ENSMUSG00000060188) Lipe (ENSMUSG00000003123) Cnfn (ENSMUSG00000063651) Megf8 (ENSMUSG00000045039) Tmem145 (ENSMUSG00000043843) Prr19 (ENSMUSG00000058741) Pafah1b3 (ENSMUSG00000005447) Cic (ENSMUSG00000005442) Erf (ENSMUSG00000040857) Gsk3a (ENSMUSG00000057177) Ryukyu mouse MODERN SPECIES 16 MGP_CAROLIEiJ_G0029391 MGP_CAROLIEiJ_G0029390 MGP_CAROLIEiJ_G0029389 Nlrp9a (MGP_CAROLIEiJ_G0029388) Nlrp4a (MGP_CAROLIEiJ_G0029387) MGP_CAROLIEiJ_G0029385 Cyp2b10 (MGP_CAROLIEiJ_G0029384) Cyp2s1 (MGP_CAROLIEiJ_G0029383) Axl (MGP_CAROLIEiJ_G0029382) Hnrnpul1 (MGP_CAROLIEiJ_G0029381) Ccdc97 (MGP_CAROLIEiJ_G0029380) Tgfb1 (MGP_CAROLIEiJ_G0029379) B9d2 (MGP_CAROLIEiJ_G0029378) Tmem91 (MGP_CAROLIEiJ_G0029377) Exosc5 (MGP_CAROLIEiJ_G0029376) Bckdha (MGP_CAROLIEiJ_G0029375) ##22 B3gnt8 (MGP_CAROLIEiJ_G0029374) Dmac2 (MGP_CAROLIEiJ_G0029373) Erich4 (MGP_CAROLIEiJ_G0029372) MGP_CAROLIEiJ_G0029371 MGP_CAROLIEiJ_G0029370 Cxcl17 (MGP_CAROLIEiJ_G0029369) Lipe (MGP_CAROLIEiJ_G0029368) Cnfn (MGP_CAROLIEiJ_G0029367) Megf8 (MGP_CAROLIEiJ_G0029366) Tmem145 (MGP_CAROLIEiJ_G0029365) Prr19 (MGP_CAROLIEiJ_G0029364) Pafah1b3 (MGP_CAROLIEiJ_G0029363) Cic (MGP_CAROLIEiJ_G0029362) Erf (MGP_CAROLIEiJ_G0029361) Gsk3a (MGP_CAROLIEiJ_G0029360) Shrew mouse MODERN SPECIES 10 MGP_PahariEiJ_G0021243 Zfp358 (MGP_PahariEiJ_G0021242) Tex45 (MGP_PahariEiJ_G0021241) MGP_PahariEiJ_G0021240 MGP_PahariEiJ_G0021239 Insr (MGP_PahariEiJ_G0021238) Cyp2b10 (MGP_PahariEiJ_G0021237) Cyp2s1 (MGP_PahariEiJ_G0021236) Axl (MGP_PahariEiJ_G0021235) Hnrnpul1 (MGP_PahariEiJ_G0021234) Ccdc97 (MGP_PahariEiJ_G0021233) Tgfb1 (MGP_PahariEiJ_G0021232) B9d2 (MGP_PahariEiJ_G0021231) Tmem91 (MGP_PahariEiJ_G0021230) Exosc5 (MGP_PahariEiJ_G0021229) Bckdha (MGP_PahariEiJ_G0021228) ##22 B3gnt8 (MGP_PahariEiJ_G0021227) Dmac2 (MGP_PahariEiJ_G0021226) Erich4 (MGP_PahariEiJ_G0021225) MGP_PahariEiJ_G0021224 MGP_PahariEiJ_G0021223 Cxcl17 (MGP_PahariEiJ_G0021222) Lipe (MGP_PahariEiJ_G0021221) Cnfn (MGP_PahariEiJ_G0021220) Megf8 (MGP_PahariEiJ_G0021219) Tmem145 (MGP_PahariEiJ_G0021218) Prr19 (MGP_PahariEiJ_G0021217) Pafah1b3 (MGP_PahariEiJ_G0021216) Cic (MGP_PahariEiJ_G0021215) Erf (MGP_PahariEiJ_G0021214) Gsk3a (MGP_PahariEiJ_G0021213) Rat MODERN SPECIES ENSRNOG00000068117 AC142154.1 (ENSRNOG00000050758) Cyp2b21 (ENSRNOG00000032004) LOC103691092 (ENSRNOG00000066079) Cyp2b3 (ENSRNOG00000033164) Cyp2b2 (ENSRNOG00000062471) Cyp2b1 (ENSRNOG00000063855) Cyp2s1 (ENSRNOG00000020743) Axl (ENSRNOG00000020716) Hnrnpul1 (ENSRNOG00000020683) Ccdc97 (ENSRNOG00000020675) Tgfb1 (ENSRNOG00000020652) B9d2 (ENSRNOG00000028753) Tmem91 (ENSRNOG00000068180) Exosc5 (ENSRNOG00000020635) Bckdha (ENSRNOG00000020607) ##22 B3gnt8 (ENSRNOG00000068024) Dmac2 (ENSRNOG00000020596) Erich4 (ENSRNOG00000037798) Ceacam1 (ENSRNOG00000020578) Cxcl17 (ENSRNOG00000037814) AC121639.1 (ENSRNOG00000020538) Lipe (ENSRNOG00000020546) Cnfn (ENSRNOG00000020530) Megf8 (ENSRNOG00000052687) Tmem145 (ENSRNOG00000020489) Prr19 (ENSRNOG00000043154) Pafah1b3 (ENSRNOG00000020481) Cic (ENSRNOG00000056118) Erf (ENSRNOG00000020426) Gsk3a (ENSRNOG00000020417) Upper Galilee mountains blind mole rat MODERN SPECIES 1709 ENSNGAG00000017538 ENSNGAG00000019633 Cyp2s1 (ENSNGAG00000010753) Axl (ENSNGAG00000001550) Hnrnpul1 (ENSNGAG00000017197) Ccdc97 (ENSNGAG00000000932) Tgfb1 (ENSNGAG00000002290) B9d2 (ENSNGAG00000004211) Tmem91 (ENSNGAG00000005127) Exosc5 (ENSNGAG00000005929) ENSNGAG00000007330 ##22 B3gnt8 (ENSNGAG00000008865) Dmac2 (ENSNGAG00000009992) Erich4 (ENSNGAG00000010587) Marsupialia ANCESTRAL SPECIES 20 ENSGT00940000164086.a ENSGT00940000162522 ENSGT00940000154117.b.b ENSGT00940000161670 ENSGT00940000157162.b ENSGT00940000157162.a ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g Marsupialia_b ANCESTRAL SPECIES 4 ENSGT00940000162522 ENSGT00940000154117.b.b.b ENSGT00940000154117.b.a ENSGT00940000161670 ENSGT00940000157162.b ENSGT00940000157162.a ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g Diprotodontia ANCESTRAL SPECIES 58 ENSGT00940000161670 ENSGT00940000157162.b ENSGT00940000157162.a ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g Diprotodontia_a ANCESTRAL SPECIES 56 ENSGT00940000161670 ENSGT00940000157162.b ENSGT00940000157162.a ENSGT00940000162131 ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g Common wonbat MODERN SPECIES 1158 ENSVURG00010003940 ENSVURG00010003924 ENSVURG00010003911 ENSVURG00010003906 ENSVURG00010003882 ENSVURG00010003876 ENSVURG00010003863 CYP2S1 (ENSVURG00010003843) AXL (ENSVURG00010003808) HNRNPUL1 (ENSVURG00010003391) CCDC97 (ENSVURG00010003343) TGFB1 (ENSVURG00010003334) B9D2 (ENSVURG00010003328) ENSVURG00010003314 EXOSC5 (ENSVURG00010003301) BCKDHA (ENSVURG00010003253) ##22 B3GNT8 (ENSVURG00010003243) ENSVURG00010003220 PRSS16 (ENSVURG00010003162) CRX (ENSVURG00010003112) NOP53 (ENSVURG00010003088) EHD2 (ENSVURG00010003073) BICRA (ENSVURG00010002965) ZNF541 (ENSVURG00010002837) NAPA (ENSVURG00010002799) ENSVURG00010002786 SLC8A2 (ENSVURG00010002773) MEIS3 (ENSVURG00010022726) DHX34 (ENSVURG00010022703) C5AR2 (ENSVURG00010022700) ENSVURG00010022698 koala MODERN SPECIES 345 ENSPCIG00000016763 AXL (ENSPCIG00000016761) ENSPCIG00000016759 HNRNPUL1 (ENSPCIG00000016758) CCDC97 (ENSPCIG00000016757) TGFB1 (ENSPCIG00000016755) B9D2 (ENSPCIG00000016752) ENSPCIG00000031405 EXOSC5 (ENSPCIG00000016745) BCKDHA (ENSPCIG00000016741) ##22 B3GNT8 (ENSPCIG00000016739) PRSS16 (ENSPCIG00000016736) ENSPCIG00000016733 NOP53 (ENSPCIG00000016718) EHD2 (ENSPCIG00000016714) BICRA (ENSPCIG00000016713) ZNF541 (ENSPCIG00000007543) NAPA (ENSPCIG00000016508) KPTN (ENSPCIG00000016494) SLC8A2 (ENSPCIG00000016491) MEIS3 (ENSPCIG00000016488) DHX34 (ENSPCIG00000000889) ENSPCIG00000000869 C5AR1 (ENSPCIG00000000822) CCDC9 (ENSPCIG00000028131) Wallaby MODERN SPECIES 2180 BCKDHA (ENSMEUG00000016345) ##22 Opossum MODERN SPECIES 3 RAB4B (ENSMODG00000007931) EGLN2 (ENSMODG00000007965) ENSMODG00000007972 CYP2F1 (ENSMODG00000007993) ENSMODG00000008215 ENSMODG00000008331 ENSMODG00000008379 ENSMODG00000008394 CYP2S1 (ENSMODG00000008416) AXL (ENSMODG00000008491) HNRNPUL1 (ENSMODG00000008592) CCDC97 (ENSMODG00000047786) TGFB1 (ENSMODG00000008630) B9D2 (ENSMODG00000008635) EXOSC5 (ENSMODG00000008642) BCKDHA (ENSMODG00000008538) ##22 ENSMODG00000008650 PRSS16 (ENSMODG00000008666) ENSMODG00000047238 NOP53 (ENSMODG00000008721) ZNF541 (ENSMODG00000008779) NAPA (ENSMODG00000008817) KPTN (ENSMODG00000008827) ENSMODG00000023716 SELENOW (ENSMODG00000023715) DHX34 (ENSMODG00000008850) C5AR2 (ENSMODG00000007252) ENSMODG00000008857 CCDC9 (ENSMODG00000008926) ENSMODG00000008934 SAE1 (ENSMODG00000008952) Platypus MODERN SPECIES 16 ENSOANG00000049527 ENSOANG00000048202 ENSOANG00000050505 ENSOANG00000013626 ENSOANG00000041196 ENSOANG00000011904 ENSOANG00000011903 CYP2B6 (ENSOANG00000002327) ENSOANG00000000852 AXL (ENSOANG00000041297) HNRNPUL1 (ENSOANG00000011111) CCDC97 (ENSOANG00000032082) TGFB1 (ENSOANG00000043657) B9D2 (ENSOANG00000046421) EXOSC5 (ENSOANG00000044960) BCKDHA (ENSOANG00000008790) ##22 B3GNT8 (ENSOANG00000041802) ENSOANG00000048851 ENSOANG00000036512 ENSOANG00000032145 ENSOANG00000047615 NOP53 (ENSOANG00000050511) NAPA (ENSOANG00000036278) KPTN (ENSOANG00000021752) SLC8A2 (ENSOANG00000040184) MEIS3 (ENSOANG00000048143) ENSOANG00000003497 PSMD8 (ENSOANG00000042903) ENSOANG00000041545 ENSOANG00000037098 RASGRP4 (ENSOANG00000037488) Sauria ANCESTRAL SPECIES 34 ENSGT00940000160655 ENSGT00940000164086 ENSGT00940000162064.c.b ENSGT00940000162064.c.a.b ENSGT00940000162064.c.a.a.a.b ENSGT00940000161670 ENSGT00940000162064.c.a.a.a.a.a ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT00940000171204 ENSGT01100000263504.a.b.a.a ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000161901 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a Lepidosauria ANCESTRAL SPECIES 39 ENSGT00940000155736.D.d ENSGT00940000162064.c.b ENSGT00940000162064.c.a.b ENSGT00940000162064.c.a.a.a.b ENSGT00940000161670 ENSGT00940000162064.c.a.a.a.a.a ENSGT00940000162064.c.a.a.a.a.b.a ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT01100000263504.a.b.b.a.b ENSGT00940000161069 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000161901 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a Episquamata ANCESTRAL SPECIES 7 ENSGT00650000093443.x ENSGT00940000157454 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT01100000263504.a.b.b.a.b ENSGT00940000161069 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000161901 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a Laterata ANCESTRAL SPECIES 17 ENSGT00650000093443.x ENSGT00940000157454 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT00940000161069 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000161901 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b Common wall lizard MODERN SPECIES 16 ENSPMRG00000009560 NKPD1 (ENSPMRG00000009544) PPP1R37 (ENSPMRG00000009519) ENSPMRG00000009505 GEMIN7 (ENSPMRG00000009499) CLASRP (ENSPMRG00000009479) RELB (ENSPMRG00000009458) CLPTM1 (ENSPMRG00000009434) AXL (ENSPMRG00000008957) HNRNPUL1 (ENSPMRG00000008875) CCDC97 (ENSPMRG00000008866) TGFB1 (ENSPMRG00000008860) B9D2 (ENSPMRG00000008855) TMEM91 (ENSPMRG00000008852) EXOSC5 (ENSPMRG00000008845) BCKDHA (ENSPMRG00000008839) ##22 ENSPMRG00000008833 B3GNT8 (ENSPMRG00000008827) DMAC2 (ENSPMRG00000008823) ENSPMRG00000008813 CRX (ENSPMRG00000008809) ENSPMRG00000008802 SELENOW (ENSPMRG00000008798) ENSPMRG00000008794 ENSPMRG00000008791 NOP53 (ENSPMRG00000008785) EHD2 (ENSPMRG00000008778) ENSPMRG00000008772 ENSPMRG00000008769 TMEM160 (ENSPMRG00000008765) ENSPMRG00000008759 Argentine black and white tegu MODERN SPECIES 59 NKPD1 (ENSSMRG00000007017) PPP1R37 (ENSSMRG00000007020) ENSSMRG00000007027 GEMIN7 (ENSSMRG00000007037) CLASRP (ENSSMRG00000007039) RELB (ENSSMRG00000007077) CLPTM1 (ENSSMRG00000007085) AXL (ENSSMRG00000007094) ENSSMRG00000007105 HNRNPUL1 (ENSSMRG00000007108) CCDC97 (ENSSMRG00000007112) TGFB1 (ENSSMRG00000007113) B9D2 (ENSSMRG00000007116) TMEM91 (ENSSMRG00000007117) EXOSC5 (ENSSMRG00000007123) BCKDHA (ENSSMRG00000007126) ##22 B3GNT8 (ENSSMRG00000007130) DMAC2 (ENSSMRG00000007131) ENSSMRG00000007133 ENSSMRG00000007137 ENSSMRG00000007141 SELENOW (ENSSMRG00000007145) ENSSMRG00000007149 NOP53 (ENSSMRG00000007150) EHD2 (ENSSMRG00000007155) ENSSMRG00000007159 BICRA (ENSSMRG00000007162) ZNF541 (ENSSMRG00000007167) ENSSMRG00000007202 NAPA (ENSSMRG00000007212) KPTN (ENSSMRG00000007219) Toxicofera ANCESTRAL SPECIES 22 ENSGT00650000093443.x ENSGT00940000157454 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT01090000260005.a.b.a.b.b ENSGT00940000161069 ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b Elapidae ANCESTRAL SPECIES 9 ENSGT00650000093443.x.b ENSGT00940000157454 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.d ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT00940000162247.a ENSGT01090000260005.a.b.a.b.b ENSGT00940000161069 ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a ENSGT00390000002548.d Elapidae_a ANCESTRAL SPECIES 33 ENSGT00650000093443.x.b ENSGT00940000157454 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.d ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT00940000161069 ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a ENSGT00390000002548.c ENSGT00390000002548.d ENSGT00940000158344.b Acanthophiinae ANCESTRAL SPECIES 32 ENSGT00650000093443.x.b ENSGT00940000157454 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457.d ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT00940000161069 ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a ENSGT00390000002548.c ENSGT00940000158344.b ENSGT00940000161057 Eastern brown snake MODERN SPECIES 77 ENSPTXG00000019062 ENSPTXG00000019061 ENSPTXG00000019060 ENSPTXG00000019059 PPP1R37 (ENSPTXG00000019058) ENSPTXG00000019057 GEMIN7 (ENSPTXG00000019056) CLASRP (ENSPTXG00000019054) ENSPTXG00000019053 CLPTM1 (ENSPTXG00000019052) AXL (ENSPTXG00000019051) ENSPTXG00000019050 CCDC97 (ENSPTXG00000019049) ENSPTXG00000019048 EXOSC5 (ENSPTXG00000019047) BCKDHA (ENSPTXG00000019046) ##22 B3GNT8 (ENSPTXG00000019045) DMAC2 (ENSPTXG00000019044) ENSPTXG00000019043 CRX (ENSPTXG00000019042) ENSPTXG00000019041 ENSPTXG00000019040 ENSPTXG00000019039 NOP53 (ENSPTXG00000019037) EHD2 (ENSPTXG00000019036) BICRA (ENSPTXG00000019035) ZNF541 (ENSPTXG00000019034) ENSPTXG00000019033 NAPA (ENSPTXG00000019032) ENSPTXG00000019031 ENSPTXG00000019030 Mainland tiger snake MODERN SPECIES 2389 BCKDHA (ENSNSUG00000000559) ##22 Blue-lipped sea krait MODERN SPECIES 3561 TMEM91 (ENSLLTG00000001504) EXOSC5 (ENSLLTG00000001489) BCKDHA (ENSLLTG00000001476) ##22 B3GNT8 (ENSLLTG00000001468) DMAC2 (ENSLLTG00000001460) ENSLLTG00000001453 Lizard MODERN SPECIES 805 ENSACAG00000042025 Bmp16 (ENSACAG00000004284) ENSACAG00000004282 CLASRP (ENSACAG00000004151) ENSACAG00000038092 ENSACAG00000004079 ENSACAG00000004030 AXL (ENSACAG00000003874) ENSACAG00000035801 ENSACAG00000044504 CCDC97 (ENSACAG00000003849) TGFB1 (ENSACAG00000023287) B9D2 (ENSACAG00000003795) TMEM91 (ENSACAG00000003792) EXOSC5 (ENSACAG00000003784) BCKDHA (ENSACAG00000003703) ##22 B3GNT8 (ENSACAG00000023978) ENSACAG00000040981 DMAC2 (ENSACAG00000038768) ENSACAG00000011239 ENSACAG00000011257 ENSACAG00000038262 ENSACAG00000027234 tuatara MODERN SPECIES 630 CYP2G1 (ENSSPUG00000013961) CYP2G56 (ENSSPUG00000013971) CYP2G57 (ENSSPUG00000013980) CYP2G59 (ENSSPUG00000013993) CYP2AR1 (ENSSPUG00000014066) ENSSPUG00000014400 ENSSPUG00000014407 HNRNPUL1 (ENSSPUG00000014431) CCDC97 (ENSSPUG00000014469) TGFB1 (ENSSPUG00000014473) B9D2 (ENSSPUG00000014482) BCKDHA (ENSSPUG00000014491) ##22 B3GNT8 (ENSSPUG00000014504) DMAC2 (ENSSPUG00000014512) ENSSPUG00000014523 ENSSPUG00000014530 Archelosauria ANCESTRAL SPECIES 33 ENSGT00940000158965 ENSGT00940000160033 ENSGT00390000012368 ENSGT00390000007046.b.a.b ENSGT00950000182767.b.a.b.b.b ENSGT00940000165900 ENSGT00940000159399 ENSGT00940000157162 ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT00940000171204 ENSGT01100000263504.a.b.a.a ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000161901 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a Archosauria ANCESTRAL SPECIES 42 ENSGT00940000160692 ENSGT00940000160957 ENSGT00940000158965 ENSGT00390000012368 ENSGT00390000007046.b.a.b ENSGT00940000159399 ENSGT00940000162064.c.b ENSGT00940000162064.c.a.a.a.a.a ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000160500 ENSGT00940000161069 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00390000014139 ENSGT00390000014682 ENSGT00940000160308 ENSGT00390000009409 Aves ANCESTRAL SPECIES 44 ENSGT00940000160692 ENSGT00940000160957 ENSGT00940000158965 ENSGT00390000012368 ENSGT00390000007046.b.a.b ENSGT00940000159399 ENSGT00940000162064.c.b ENSGT00940000162064.c.a.a.a.a.a ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000160500 ENSGT00940000161069 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00390000014139 ENSGT00390000014682 ENSGT00940000160308 ENSGT00390000009409 Neognathae ANCESTRAL SPECIES 39 ENSGT00940000160692 ENSGT00940000160957 ENSGT00940000158965 ENSGT00390000012368 ENSGT00390000007046.b.a.b ENSGT00940000159399 ENSGT00940000162064.c.b ENSGT00940000162064.c.a.a.a.a.a ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000160500 ENSGT00940000161069 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00390000014682 ENSGT00940000160308 ENSGT00390000009409 ENSGT00940000159343 Galloanserae ANCESTRAL SPECIES 54 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000171855 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000160500 ENSGT00940000161069 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b Phasianidae ANCESTRAL SPECIES 43 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000171855 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000160500 ENSGT00940000161069 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b Phasianidae_b ANCESTRAL SPECIES 51 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000171855 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000160500 ENSGT00940000161069 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b Chicken MODERN SPECIES 31 SHKBP1 (ENSGALG00010008437) ENSGALG00010010899 ENSGALG00010008428 ENSGALG00010008419 SMARCA4 (ENSGALG00010008408) ENSGALG00010010892 PSMD8 (ENSGALG00010008401) AKT2 (ENSGALG00010008377) ENSGALG00010008352 PLD3 (ENSGALG00010008342) HNRNPUL1 (ENSGALG00010008335) CCDC97 (ENSGALG00010008331) TGFB1 (ENSGALG00010008327) EXOSC5 (ENSGALG00010008310) DMAC2 (ENSGALG00010008295) BCKDHA (ENSGALG00010008284) ##22 OTX5 (ENSGALG00010008261) H3-IX (ENSGALG00010008224) SELENOW (ENSGALG00010008215) ENSGALG00010008205 NOP53 (ENSGALG00010008186) EHD2 (ENSGALG00010010813) BICRA (ENSGALG00010010800) ENSGALG00010010789 NAPA (ENSGALG00010010781) KPTN (ENSGALG00010010774) SLC8A2 (ENSGALG00010010770) ENSGALG00010010765 RYR1 (ENSGALG00010009379) EIF3K (ENSGALG00010009330) MAP4K1 (ENSGALG00010009299) Japanese quail MODERN SPECIES 57 ENSCJPG00005003249 HNRNPUL1 (ENSCJPG00005003224) TGFB1 (ENSCJPG00005003218) ENSCJPG00005003217 ENSCJPG00005003215 ENSCJPG00005003207 CRX (ENSCJPG00005003206) BCKDHA (ENSCJPG00005003201) ##22 ENSCJPG00005003197 ENSCJPG00005003194 ENSCJPG00005003191 ENSCJPG00005003189 ENSCJPG00005003186 BICRA (ENSCJPG00005003184) ZNF541 (ENSCJPG00005003173) KPTN (ENSCJPG00005003168) SLC8A2 (ENSCJPG00005003163) Anatidae ANCESTRAL SPECIES ENSGT00530000063174.b ##22 Duck MODERN SPECIES 2930 BCKDHA (ENSAPLG00000029759) ##22 Neognathae_b ANCESTRAL SPECIES 41 ENSGT00940000160692 ENSGT00940000160957 ENSGT00940000158965 ENSGT00390000012368 ENSGT00390000007046.b.a.b ENSGT00940000159399 ENSGT00940000162064.c.b ENSGT00940000162064.c.a.a.a.a.a ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000160500 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00390000014682 Passeriformes ANCESTRAL SPECIES ENSGT00530000063174.b ##22 Passeriformes_d ANCESTRAL SPECIES ENSGT00530000063174.b ##22 Passeriformes_g ANCESTRAL SPECIES ENSGT00530000063174.b ##22 Passeroidea ANCESTRAL SPECIES ENSGT00530000063174.b ##22 Zebra finch DUPLICATION Zebra finch MODERN SPECIES 90 ENSTGUG00000019354 ENSTGUG00000022003 ENSTGUG00000026374 ENSTGUG00000019908 ENSTGUG00000028606 ENSTGUG00000027343 ENSTGUG00000027646 ENSTGUG00000020383 ENSTGUG00000020070 ENSTGUG00000029604 ENSTGUG00000018974 ENSTGUG00000027110 ENSTGUG00000028095 ENSTGUG00000022886 ENSTGUG00000022867 ENSTGUG00000026946 ##22 ENSTGUG00000028622 ENSTGUG00000028656 ENSTGUG00000026943 ENSTGUG00000029586 ENSTGUG00000023185 ENSTGUG00000026521 ENSTGUG00000028463 ENSTGUG00000025277 ENSTGUG00000026509 EHD2 (ENSTGUG00000024660) NOP53 (ENSTGUG00000018833) ENSTGUG00000029304 ENSTGUG00000026183 ENSTGUG00000023522 ENSTGUG00000022039 Zebra finch MODERN SPECIES 90 ENSTGUG00000022495 ENSTGUG00000029576 ENSTGUG00000024556 ENSTGUG00000025665 ENSTGUG00000029511 ENSTGUG00000023076 ENSTGUG00000021178 ENSTGUG00000025499 FBXO46 (ENSTGUG00000029559) ENSTGUG00000029438 ENSTGUG00000026297 ENSTGUG00000028322 ENSTGUG00000022191 ENSTGUG00000019740 ENSTGUG00000023141 ENSTGUG00000022044 ##22 ENSTGUG00000022571 ENSTGUG00000020962 ENSTGUG00000018913 ENSTGUG00000028171 ENSTGUG00000028954 ENSTGUG00000019023 ENSTGUG00000022424 ENSTGUG00000019027 ENSTGUG00000021829 ENSTGUG00000021988 ENSTGUG00000027973 ENSTGUG00000021795 ENSTGUG00000020906 ENSTGUG00000026538 ENSTGUG00000029474 Common canary MODERN SPECIES 501 ENSSCAG00000001299 ##22 Neognathae_c ANCESTRAL SPECIES 43 ENSGT00940000159183 ENSGT00940000160692 ENSGT00940000160957 ENSGT00940000158965 ENSGT00390000012368 ENSGT00390000007046.b.a.b ENSGT00940000159399 ENSGT00940000162064.c.b ENSGT00940000160232 ENSGT00940000178461 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000160500 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000159112.b Kakapo MODERN SPECIES 68 POLR2I (ENSSHBG00005014879) TBCB (ENSSHBG00005014890) ARHGAP35 (ENSSHBG00005014898) AP2S1 (ENSSHBG00005014905) FKRP (ENSSHBG00005014911) ACTMAP (ENSSHBG00005014916) SNRPA (ENSSHBG00005014922) RAB4B (ENSSHBG00005014929) AXL (ENSSHBG00005014939) ENSSHBG00005014950 HNRNPUL1 (ENSSHBG00005001118) CCDC97 (ENSSHBG00005001120) TGFB1 (ENSSHBG00005001122) B9D2 (ENSSHBG00005012949) EXOSC5 (ENSSHBG00005012977) BCKDHA (ENSSHBG00005013007) ##22 DMAC2 (ENSSHBG00005013024) ENSSHBG00005013034 NOP53 (ENSSHBG00005013043) EHD2 (ENSSHBG00005013052) BICRA (ENSSHBG00005013082) SIPA1L3 (ENSSHBG00005013143) SNRPD2 (ENSSHBG00005013221) DPF1 (ENSSHBG00005013236) PPP1R13L (ENSSHBG00005013247) ENSSHBG00005013265 CLPTM1 (ENSSHBG00005013298) RELB (ENSSHBG00005013694) CLASRP (ENSSHBG00005013702) ENSSHBG00005013713 ENSSHBG00005013720 Cryptodira ANCESTRAL SPECIES 35 ENSGT00940000157162 ENSGT00940000160232 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT01100000263504.a.b.b.a.b ENSGT00940000161069 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000161901 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a Testudinoidea ANCESTRAL SPECIES 30 ENSGT00940000162064.c.a.b ENSGT00940000162064.c.a.a.a.b.f ENSGT00960000189554 ENSGT00940000162064.c.a.a.a.b.e ENSGT00940000161670 ENSGT00940000162064.c.a.a.a.a.a ENSGT00940000162064.c.a.a.a.a.b.a ENSGT00940000157162 ENSGT00940000160232 ENSGT00940000155454.t ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00940000153348.C.a ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000161901 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b Emydidae ANCESTRAL SPECIES 45 ENSGT00940000159399 ENSGT00940000162064.c.b ENSGT00940000155736.D.d.b ENSGT00940000162064.c.a.a.a.b.f ENSGT00960000189554 ENSGT00940000162064.c.a.a.a.b.e ENSGT00940000161670 ENSGT00940000162064.c.a.a.a.a.a ENSGT00940000162064.c.a.a.a.a.b.a ENSGT00940000157162 ENSGT00940000162064.c.a.a.a.a.b.b ENSGT00940000160457.e ENSGT00950000183147.A.b.a ENSGT00940000155454.t ENSGT00940000157823 ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01100000263504.a.b.a.b.a.b ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000161901 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b Three-toed box turtle MODERN SPECIES 252 SIPA1L3 (ENSTMTG00000016236) ACTMAP (ENSTMTG00000016282) SNRPA (ENSTMTG00000016299) MIA (ENSTMTG00000016320) ENSTMTG00000016332 RAB4B (ENSTMTG00000016345) ENSTMTG00000016373 ENSTMTG00000016393 ENSTMTG00000016419 ENSTMTG00000016436 ENSTMTG00000016443 ENSTMTG00000016452 ENSTMTG00000016477 ENSTMTG00000016533 HNRNPUL1 (ENSTMTG00000003342) BCKDHA (ENSTMTG00000003495) ##22 B3GNT8 (ENSTMTG00000003523) DMAC2 (ENSTMTG00000003536) ENSTMTG00000003567 ENSTMTG00000003605 ENSTMTG00000003643 SELENOW (ENSTMTG00000003661) EHD2 (ENSTMTG00000003679) ENSTMTG00000003694 BICRA (ENSTMTG00000003713) ZNF541 (ENSTMTG00000003768) ENSTMTG00000003897 NAPA (ENSTMTG00000003917) KPTN (ENSTMTG00000003997) SLC8A2 (ENSTMTG00000004021) ENSTMTG00000004088 painted turtle MODERN SPECIES 949 ENSCPBG00000009761 ENSCPBG00000009749 ENSCPBG00000009738 ENSCPBG00000009735 ENSCPBG00000009724 ENSCPBG00000009208 ENSCPBG00000009199 ENSCPBG00000009158 CYP2B6 (ENSCPBG00000009150) ENSCPBG00000009142 ENSCPBG00000009133 ENSCPBG00000009126 ENSCPBG00000009125 ENSCPBG00000009119 BCKDHA (ENSCPBG00000009111) ##22 B3GNT8 (ENSCPBG00000009107) DMAC2 (ENSCPBG00000009103) ENSCPBG00000009093 CRX (ENSCPBG00000009076) ENSCPBG00000009066 ENSCPBG00000009062 ENSCPBG00000009057 NOP53 (ENSCPBG00000009047) EHD2 (ENSCPBG00000009041) ENSCPBG00000009033 ENSCPBG00000009030 BICRA (ENSCPBG00000009017) ZNF541 (ENSCPBG00000009004) ENSCPBG00000009000 NAPA (ENSCPBG00000008994) Testudinidae ANCESTRAL SPECIES 36 ENSGT00940000162064.c.a.b ENSGT00940000162064.c.a.a.a.b.f ENSGT00940000162064.c.a.a.a.b.e ENSGT00940000161670 ENSGT00940000162064.c.a.a.a.a.a ENSGT00940000162064.c.a.a.a.a.b.a ENSGT00940000157162 ENSGT00940000160232 ENSGT00940000155454.t ENSGT00940000167826 ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000160457 ENSGT00940000161428 ENSGT00940000153348.C.a ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160500 ENSGT00940000160281 ENSGT00940000161634 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000161901 ENSGT00940000159112.b ENSGT00940000160330 ENSGT00940000158431.a.a.a.a.b.a ENSGT00390000005826.a.a ENSGT00390000002548 ENSGT00940000158344.b ENSGT00940000161057.f Abingdon island giant tortoise MODERN SPECIES 1905 ENSCABG00000023187 ENSCABG00000023188 ENSCABG00000023189 ENSCABG00000023190 ENSCABG00000023191 ENSCABG00000023192 ENSCABG00000023193 ENSCABG00000023194 AXL (ENSCABG00000023195) ENSCABG00000023196 HNRNPUL1 (ENSCABG00000023197) CCDC97 (ENSCABG00000023198) TGFB1 (ENSCABG00000023199) B9D2 (ENSCABG00000023200) EXOSC5 (ENSCABG00000023201) BCKDHA (ENSCABG00000023202) ##22 B3GNT8 (ENSCABG00000023203) DMAC2 (ENSCABG00000023204) ENSCABG00000023205 CRX (ENSCABG00000023206) ENSCABG00000023207 ENSCABG00000023208 ENSCABG00000023209 ENSCABG00000023210 Anura ANCESTRAL SPECIES 121 ENSGT00940000155736.D.a.b.a ENSGT00940000162064.d.c.a.a.a ENSGT00940000155736.D.b ENSGT00940000162064.d.d ENSGT00940000160232 ENSGT00940000155454.g.b.a.a ENSGT00940000155454.g.a ENSGT00940000157823 ENSGT00390000015495 ENSGT00940000155747 ENSGT00940000161428 ENSGT00950000183147.A.b.a ENSGT00940000153348.C ENSGT00530000063174.b ##22 ENSGT00940000161895 ENSGT00940000160281 ENSGT00940000161634 ENSGT01090000260005.a.b.a.b.b ENSGT00390000017267 ENSGT00940000159256 ENSGT00940000161901 ENSGT00940000159112.b ENSGT00390000005826.a.a ENSGT00940000158344.b ENSGT00940000161057 ENSGT00390000014682 ENSGT00940000161445 ENSGT00440000037341.b.b ENSGT00940000159883 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 1023 ENSLLEG00000012305 TMEM91 (ENSLLEG00000012332) EXOSC5 (ENSLLEG00000012379) ENSLLEG00000012494 ##22 ENSLLEG00000012693 B3GNT8 (ENSLLEG00000012730) ENSLLEG00000012750 DMAC2 (ENSLLEG00000012776) Leishan spiny toad MODERN SPECIES 7 ENSLLEG00000010053 ENSLLEG00000010037 RHOU (ENSLLEG00000010003) ENSLLEG00000009961 EGLN1 (ENSLLEG00000009815) ENSLLEG00000009600 EXOC8 (ENSLLEG00000009559) ENSLLEG00000009542 ENSLLEG00000009514 ENSLLEG00000009482 SIPA1L2 (ENSLLEG00000008383) ENSLLEG00000008267 NTPCR (ENSLLEG00000008159) ENSLLEG00000008143 ENSLLEG00000008125 ENSLLEG00000008047 ##22 ENSLLEG00000007779 KCNK1 (ENSLLEG00000007725) ENSLLEG00000007711 ENSLLEG00000007691 TBCE (ENSLLEG00000007632) B3GALNT2 (ENSLLEG00000007354) GNG4 (ENSLLEG00000007174) ENSLLEG00000007161 ENSLLEG00000007149 LYST (ENSLLEG00000005779) ENSLLEG00000005618 ENSLLEG00000005580 ENSLLEG00000005563 ENSLLEG00000012359 ENSLLEG00000012341 Frog MODERN SPECIES 8 cyp2a6.4 (ENSXETG00000033545) cyp2a6.3 (ENSXETG00000027563) cyp2a6.2 (ENSXETG00000024858) cyp2a6.1 (ENSXETG00000008796) ENSXETG00000042438 ENSXETG00000044535 mgc69353 (ENSXETG00000018696) cyp2g1p (ENSXETG00000027556) axl (ENSXETG00000018708) olfm4 (ENSXETG00000018715) ENSXETG00000031089 hnrnpul1 (ENSXETG00000018718) ccdc97 (ENSXETG00000018736) tgfb1 (ENSXETG00000018738) b9d2 (ENSXETG00000018749) bckdha (ENSXETG00000018753) ##22 exosc5 (ENSXETG00000018752) dmac2 (ENSXETG00000018756) prss16 (ENSXETG00000018761) crx (ENSXETG00000018775) ENSXETG00000038813 ENSXETG00000002781 nop53 (ENSXETG00000002782) ehd2 (ENSXETG00000002783) XB5844015 [provisional:capn2] (ENSXETG00000039899) bicra (ENSXETG00000002787) napa (ENSXETG00000002788) slc8a2 (ENSXETG00000002790) meis3 (ENSXETG00000002807) psmd8 (ENSXETG00000002818) ENSXETG00000042074