Eutheria ANCESTRAL SPECIES 26 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Glires ANCESTRAL SPECIES 10 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Rodentia ANCESTRAL SPECIES 10 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Rodentia_B ANCESTRAL SPECIES 31 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Myomorpha ANCESTRAL SPECIES 6 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Muroidea ANCESTRAL SPECIES 30 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Cricetidae ANCESTRAL SPECIES 8 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C.p.b #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.a.a ##27 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.cc.a #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Cricetinae ANCESTRAL SPECIES 17 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C.p.b #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.cc.a #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Chinese hamster chok1gshd MODERN SPECIES 230 Ctps2 (ENSCGRG00001020136) #7 Syap1 (ENSCGRG00001017761) #8 Txlng (ENSCGRG00001016480) #9 ENSCGRG00001007647 #10 Reps2 (ENSCGRG00001011156) #11 Nhs (ENSCGRG00001020344) #12 Rai2 (ENSCGRG00001015408) #13 ENSCGRG00001012613 #14 Scml2 (ENSCGRG00001017848) #15 Cdkl5 (ENSCGRG00001020755) #16 Rs1 (ENSCGRG00001017692) #17 Ppef1 (ENSCGRG00001015088) #18 Phka2 (ENSCGRG00001021729) #19 Adgrg2 (ENSCGRG00001022355) #20 ENSCGRG00001020861 #21 Pdha1 (ENSCGRG00001020742) #22 Map3k15 (ENSCGRG00001017037) #23 Sh3kbp1 (ENSCGRG00001012962) #24 Bclaf3 (ENSCGRG00001017632) #25 Map7d2 (ENSCGRG00001005576) #26 ENSCGRG00001022852 #27 Rps6ka3 (ENSCGRG00001007518) #28 Cnksr2 (ENSCGRG00001022169) #29 Klhl34 (ENSCGRG00001014357) #30 Smpx (ENSCGRG00001020401) #31 MBTPS2 (ENSCGRG00001018020) #32 ENSCGRG00001000646 #33 Phex (ENSCGRG00001019759) #34 ENSCGRG00001015986 #35 ENSCGRG00001015828 #36 Ptchd1 (ENSCGRG00001010854) #37 Golden Hamster MODERN SPECIES 661 Ctps2 (ENSMAUG00000017364) #7 S100g (ENSMAUG00000018622) Syap1 (ENSMAUG00000004105) #8 Txlng (ENSMAUG00000016890) #9 Rbbp7 (ENSMAUG00000008982) #10 Reps2 (ENSMAUG00000017739) #11 Nhs (ENSMAUG00000016663) #12 Rai2 (ENSMAUG00000010443) #13 ENSMAUG00000014559 #14 Cdkl5 (ENSMAUG00000009424) #16 Gja6 (ENSMAUG00000016764) Rs1 (ENSMAUG00000017955) #17 Ppef1 (ENSMAUG00000016981) #18 Phka2 (ENSMAUG00000001285) #19 Adgrg2 (ENSMAUG00000001544) #20 Pdha1 (ENSMAUG00000002413) #22 Map3k15 (ENSMAUG00000006183) #23 Sh3kbp1 (ENSMAUG00000017328) #24 ENSMAUG00000009356 Map7d2 (ENSMAUG00000016214) #26 ENSMAUG00000007856 ENSMAUG00000012396 #27 Rps6ka3 (ENSMAUG00000015390) #28 ENSMAUG00000017351 ENSMAUG00000008169 Cnksr2 (ENSMAUG00000021259) #29 Smpx (ENSMAUG00000016078) #31 Mbtps2 (ENSMAUG00000017121) #32 Yy2 (ENSMAUG00000016161) Sms (ENSMAUG00000017854) #33 Phex (ENSMAUG00000016421) #34 Cricetidae_B ANCESTRAL SPECIES 36 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C.p.b #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.a.a ##27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.cc.a #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Prairie vole MODERN SPECIES 360 Syap1 (ENSMOCG00000003662) #8 ENSMOCG00000007235 #9 Rbbp7 (ENSMOCG00000019533) #10 Reps2 (ENSMOCG00000007173) #11 ENSMOCG00000001018 ENSMOCG00000006840 Nhs (ENSMOCG00000016164) #12 Rai2 (ENSMOCG00000020088) #13 Bend2 (ENSMOCG00000002447) #14 Scml2 (ENSMOCG00000004081) #15 Cdkl5 (ENSMOCG00000014110) #16 Rs1 (ENSMOCG00000012992) #17 Ppef1 (ENSMOCG00000019014) #18 Phka2 (ENSMOCG00000021208) #19 Adgrg2 (ENSMOCG00000011315) #20 Pdha1 (ENSMOCG00000002601) #22 Map3k15 (ENSMOCG00000013071) #23 Sh3kbp1 (ENSMOCG00000020425) #24 Bclaf3 (ENSMOCG00000005833) #25 Map7d2 (ENSMOCG00000019149) #26 ENSMOCG00000004138 ENSMOCG00000013551 ##27 Rps6ka3 (ENSMOCG00000012164) #28 ENSMOCG00000016797 ENSMOCG00000017907 Cnksr2 (ENSMOCG00000000158) #29 Smpx (ENSMOCG00000009712) #31 Mbtps2 (ENSMOCG00000016533) #32 Yy2 (ENSMOCG00000013780) Sms (ENSMOCG00000016092) #33 Phex (ENSMOCG00000021326) #34 Northern American deer mouse MODERN SPECIES 475 Syap1 (ENSPEMG00000017603) #8 Txlng (ENSPEMG00000000072) #9 Rbbp7 (ENSPEMG00000000458) #10 ENSPEMG00000031235 Reps2 (ENSPEMG00000006508) #11 Nhs (ENSPEMG00000017716) #12 Rai2 (ENSPEMG00000008659) #13 Bend2 (ENSPEMG00000011757) #14 ENSPEMG00000030730 #15 Cdkl5 (ENSPEMG00000002138) #16 Rs1 (ENSPEMG00000008058) #17 Ppef1 (ENSPEMG00000012697) #18 Phka2 (ENSPEMG00000004706) #19 Adgrg2 (ENSPEMG00000001110) #20 ENSPEMG00000026878 Pdha1 (ENSPEMG00000008945) #22 Map3k15 (ENSPEMG00000012858) #23 Sh3kbp1 (ENSPEMG00000007129) #24 Bclaf3 (ENSPEMG00000008136) #25 Map7d2 (ENSPEMG00000000311) #26 ENSPEMG00000026098 ##27 Rps6ka3 (ENSPEMG00000018584) #28 ENSPEMG00000026965 Cnksr2 (ENSPEMG00000012770) #29 Klhl34 (ENSPEMG00000026377) #30 Smpx (ENSPEMG00000011852) #31 ENSPEMG00000026716 Mbtps2 (ENSPEMG00000012008) #32 Sms (ENSPEMG00000003756) #33 Phex (ENSPEMG00000017527) #34 Ptchd1 (ENSPEMG00000024561) #37 Murinae ANCESTRAL SPECIES 32 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Mus ANCESTRAL SPECIES 9 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00950000182987.c.a.a.o.b.h ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00860000136365 ENSGT00940000157080 #37 Mus_A ANCESTRAL SPECIES 15 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.a.a ##27 ENSGT00940000159370 #28 ENSGT00950000182987.c.a.a.o.b.h ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00860000136365 ENSGT00940000157080 #37 Mus_B ANCESTRAL SPECIES 14 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.b #27 ENSGT00940000159370 #28 ENSGT00950000182987.c.a.a.o.b.h ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00860000136365 ENSGT00940000157080 #37 Mouse MODERN SPECIES 37 Ctps2 (ENSMUSG00000031360) #7 Syap1 (ENSMUSG00000031357) #8 Txlng (ENSMUSG00000038344) #9 Rbbp7 (ENSMUSG00000031353) #10 Reps2 (ENSMUSG00000040855) #11 Nhs (ENSMUSG00000059493) #12 Rai2 (ENSMUSG00000043518) #13 Bend2 (ENSMUSG00000108981) #14 Scml2 (ENSMUSG00000000037) #15 Gja6 (ENSMUSG00000055691) Cdkl5 (ENSMUSG00000031292) #16 Rs1 (ENSMUSG00000031293) #17 Ppef1 (ENSMUSG00000062168) #18 Phka2 (ENSMUSG00000031295) #19 Adgrg2 (ENSMUSG00000031298) #20 Pdha1 (ENSMUSG00000031299) #22 Map3k15 (ENSMUSG00000031303) #23 Sh3kbp1 (ENSMUSG00000040990) #24 Bclaf3 (ENSMUSG00000044150) #25 Map7d2 (ENSMUSG00000041020) #26 Eif1ax (ENSMUSG00000067194) #27 Rps6ka3 (ENSMUSG00000031309) #28 Cnksr2 (ENSMUSG00000025658) #29 Klhl34 (ENSMUSG00000047485) #30 Smpx (ENSMUSG00000041476) #31 Yy2 (ENSMUSG00000091736) Mbtps2 (ENSMUSG00000046873) #32 Sms (ENSMUSG00000071708) #33 Phex (ENSMUSG00000057457) #34 Gm15155 (ENSMUSG00000055109) Ptchd1 (ENSMUSG00000041552) #37 Mus_C ANCESTRAL SPECIES 22 ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j.a.a ##27 ENSGT00940000159370 #28 ENSGT00950000182987.c.a.a.o.b.h ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00860000136365 ENSGT00940000157080 #37 Steppe mouse MODERN SPECIES 1826 ENSMSIG00000000851 #22 Map3k15 (ENSMSIG00000000871) #23 spretus MODERN SPECIES 19 S100g (MGP_SPRETEiJ_G0034721) Ctps2 (MGP_SPRETEiJ_G0034720) #7 Syap1 (MGP_SPRETEiJ_G0034719) #8 Txlng (MGP_SPRETEiJ_G0034718) #9 Rbbp7 (MGP_SPRETEiJ_G0034717) #10 Reps2 (MGP_SPRETEiJ_G0034716) #11 Nhs (MGP_SPRETEiJ_G0034715) #12 Rai2 (MGP_SPRETEiJ_G0034714) #13 MGP_SPRETEiJ_G0034713 #15 Gja6 (MGP_SPRETEiJ_G0034712) Cdkl5 (MGP_SPRETEiJ_G0034711) #16 Rs1 (MGP_SPRETEiJ_G0034710) #17 Ppef1 (MGP_SPRETEiJ_G0034709) #18 Phka2 (MGP_SPRETEiJ_G0034708) #19 Adgrg2 (MGP_SPRETEiJ_G0034707) #20 Pdha1 (MGP_SPRETEiJ_G0034706) #22 Map3k15 (MGP_SPRETEiJ_G0034705) #23 Sh3kbp1 (MGP_SPRETEiJ_G0034704) #24 Bclaf3 (MGP_SPRETEiJ_G0034703) #25 Map7d2 (MGP_SPRETEiJ_G0034702) #26 MGP_SPRETEiJ_G0034701 ##27 Rps6ka3 (MGP_SPRETEiJ_G0034700) #28 MGP_SPRETEiJ_G0034699 Cnksr2 (MGP_SPRETEiJ_G0034698) #29 Klhl34 (MGP_SPRETEiJ_G0034697) #30 Smpx (MGP_SPRETEiJ_G0034696) #31 Yy2 (MGP_SPRETEiJ_G0034695) Mbtps2 (MGP_SPRETEiJ_G0034694) #32 Sms (MGP_SPRETEiJ_G0034693) #33 Phex (MGP_SPRETEiJ_G0034692) #34 MGP_SPRETEiJ_G0034691 Ryukyu mouse MODERN SPECIES 19 S100g (MGP_CAROLIEiJ_G0033551) Ctps2 (MGP_CAROLIEiJ_G0033550) #7 Syap1 (MGP_CAROLIEiJ_G0033549) #8 Txlng (MGP_CAROLIEiJ_G0033548) #9 Rbbp7 (MGP_CAROLIEiJ_G0033547) #10 Reps2 (MGP_CAROLIEiJ_G0033546) #11 Nhs (MGP_CAROLIEiJ_G0033545) #12 Rai2 (MGP_CAROLIEiJ_G0033544) #13 MGP_CAROLIEiJ_G0033543 #15 Gja6 (MGP_CAROLIEiJ_G0033542) Cdkl5 (MGP_CAROLIEiJ_G0033541) #16 Rs1 (MGP_CAROLIEiJ_G0033540) #17 Ppef1 (MGP_CAROLIEiJ_G0033539) #18 Phka2 (MGP_CAROLIEiJ_G0033538) #19 Adgrg2 (MGP_CAROLIEiJ_G0033537) #20 Pdha1 (MGP_CAROLIEiJ_G0033536) #22 Map3k15 (MGP_CAROLIEiJ_G0033535) #23 Sh3kbp1 (MGP_CAROLIEiJ_G0033534) #24 Bclaf3 (MGP_CAROLIEiJ_G0033533) #25 Map7d2 (MGP_CAROLIEiJ_G0033532) #26 MGP_CAROLIEiJ_G0033531 ##27 Rps6ka3 (MGP_CAROLIEiJ_G0033530) #28 MGP_CAROLIEiJ_G0033529 Cnksr2 (MGP_CAROLIEiJ_G0033528) #29 Klhl34 (MGP_CAROLIEiJ_G0033527) #30 Smpx (MGP_CAROLIEiJ_G0033526) #31 Yy2 (MGP_CAROLIEiJ_G0033525) Mbtps2 (MGP_CAROLIEiJ_G0033524) #32 Sms (MGP_CAROLIEiJ_G0033523) #33 Phex (MGP_CAROLIEiJ_G0033522) #34 MGP_CAROLIEiJ_G0033521 Shrew mouse MODERN SPECIES 23 S100g (MGP_PahariEiJ_G0032090) Ctps2 (MGP_PahariEiJ_G0032089) #7 Syap1 (MGP_PahariEiJ_G0032088) #8 Txlng (MGP_PahariEiJ_G0032087) #9 Rbbp7 (MGP_PahariEiJ_G0032086) #10 Reps2 (MGP_PahariEiJ_G0032085) #11 Nhs (MGP_PahariEiJ_G0032084) #12 Rai2 (MGP_PahariEiJ_G0032083) #13 MGP_PahariEiJ_G0032082 #15 Gja6 (MGP_PahariEiJ_G0032081) Cdkl5 (MGP_PahariEiJ_G0032080) #16 Rs1 (MGP_PahariEiJ_G0032079) #17 Ppef1 (MGP_PahariEiJ_G0032078) #18 Phka2 (MGP_PahariEiJ_G0032077) #19 Adgrg2 (MGP_PahariEiJ_G0032076) #20 Pdha1 (MGP_PahariEiJ_G0032075) #22 Map3k15 (MGP_PahariEiJ_G0032074) #23 Sh3kbp1 (MGP_PahariEiJ_G0032073) #24 Bclaf3 (MGP_PahariEiJ_G0032072) #25 Map7d2 (MGP_PahariEiJ_G0032071) #26 MGP_PahariEiJ_G0032070 #27 Rps6ka3 (MGP_PahariEiJ_G0032069) #28 MGP_PahariEiJ_G0032068 Cnksr2 (MGP_PahariEiJ_G0032067) #29 Klhl34 (MGP_PahariEiJ_G0032066) #30 Smpx (MGP_PahariEiJ_G0032065) #31 Yy2 (MGP_PahariEiJ_G0032064) Mbtps2 (MGP_PahariEiJ_G0032063) #32 Sms (MGP_PahariEiJ_G0032062) #33 Phex (MGP_PahariEiJ_G0032061) #34 MGP_PahariEiJ_G0032060 Rat DUPLICATION Rat MODERN SPECIES 7 Shcbp1 (ENSRNOG00000053026) ENSRNOG00000069339 ENSRNOG00000064130 ENSRNOG00000062801 Slc10a2 (ENSRNOG00000037753) Pdha1l1 (ENSRNOG00000014745) #22 Efnb2 (ENSRNOG00000064362) Arglu1 (ENSRNOG00000024142) Nalf1 (ENSRNOG00000066120) Lig4 (ENSRNOG00000014605) Abhd13 (ENSRNOG00000014598) AABR07026596.2 (ENSRNOG00000055140) Tnfsf13b (ENSRNOG00000014464) Myo16 (ENSRNOG00000016483) LOC689713 (ENSRNOG00000033703) ENSRNOG00000063036 Irs2 (ENSRNOG00000023509) Col4a1 (ENSRNOG00000016281) Col4a2 (ENSRNOG00000023972) Rab20 (ENSRNOG00000023991) Naxd (ENSRNOG00000015021) Rat MODERN SPECIES 46 Nhs (ENSRNOG00000030759) #12 Scml1 (ENSRNOG00000052694) RGD1566197 (ENSRNOG00000032797) Rai2 (ENSRNOG00000006670) #13 Scml2 (ENSRNOG00000003726) #15 Cdkl5 (ENSRNOG00000003742) #16 Gja6 (ENSRNOG00000069341) Rs1 (ENSRNOG00000030434) #17 ENSRNOG00000065877 Ppef1 (ENSRNOG00000027331) #18 AABR07037995.1 (ENSRNOG00000003949) #19 Adgrg2 (ENSRNOG00000032472) #20 Rps27a-ps5 (ENSRNOG00000032132) ENSRNOG00000069571 Lamtor1 (ENSRNOG00000004319) Pdha1 (ENSRNOG00000025383) #22 Map3k15 (ENSRNOG00000025290) #23 ENSRNOG00000066262 Sh3kbp1 (ENSRNOG00000004322) #24 Bclaf3 (ENSRNOG00000005135) #25 Map7d2 (ENSRNOG00000005176) #26 Eif1ax (ENSRNOG00000005736) #27 Rps6ka3 (ENSRNOG00000006632) #28 ENSRNOG00000062879 Cnksr2 (ENSRNOG00000007014) #29 Klhl34 (ENSRNOG00000024479) #30 Smpx (ENSRNOG00000007495) #31 ENSRNOG00000068938 Yy2 (ENSRNOG00000007644) #32 Sms (ENSRNOG00000007688) #33 Phex (ENSRNOG00000023440) #34 Upper Galilee mountains blind mole rat MODERN SPECIES 931 Cdkl5 (ENSNGAG00000010787) #16 Rs1 (ENSNGAG00000010391) #17 Ppef1 (ENSNGAG00000014571) #18 ENSNGAG00000017231 #19 Adgrg2 (ENSNGAG00000011202) #20 Pdha1 (ENSNGAG00000015013) #22 Map3k15 (ENSNGAG00000018804) #23 Sh3kbp1 (ENSNGAG00000021155) #24 Bclaf3 (ENSNGAG00000015524) #25 Map7d2 (ENSNGAG00000016712) #26 Eif1ax (ENSNGAG00000018551) #27 Rps6ka3 (ENSNGAG00000019940) #28 Cnksr2 (ENSNGAG00000009070) #29 Lesser Egyptian jerboa MODERN SPECIES 147 ENSJJAG00000018971 S100g (ENSJJAG00000018528) Ctps2 (ENSJJAG00000017649) #7 Syap1 (ENSJJAG00000015936) #8 ENSJJAG00000015727 #9 Rbbp7 (ENSJJAG00000015390) #10 Reps2 (ENSJJAG00000013946) #11 ENSJJAG00000012765 Nhs (ENSJJAG00000012415) #12 Rai2 (ENSJJAG00000011458) #13 Cdkl5 (ENSJJAG00000011323) #16 Rs1 (ENSJJAG00000000704) #17 Ppef1 (ENSJJAG00000000417) #18 ENSJJAG00000000145 #19 Adgrg2 (ENSJJAG00000016266) #20 Pdha1 (ENSJJAG00000013156) #22 Map3k15 (ENSJJAG00000012581) #23 Sh3kbp1 (ENSJJAG00000011003) #24 ENSJJAG00000009450 ENSJJAG00000008028 ENSJJAG00000007541 ENSJJAG00000006859 Tbl1x (ENSJJAG00000006406) ENSJJAG00000004898 ENSJJAG00000003177 Kangaroo rat MODERN SPECIES 413 ENSDORG00000011776 #18 ENSDORG00000026958 #19 Adgrg2 (ENSDORG00000003270) #20 Pdha1 (ENSDORG00000011848) #22 Map3k15 (ENSDORG00000011849) #23 Sh3kbp1 (ENSDORG00000005919) #24 Bclaf3 (ENSDORG00000007988) #25 Map7d2 (ENSDORG00000007990) #26 ENSDORG00000011536 ##27 Rps6ka3 (ENSDORG00000011802) #28 ENSDORG00000029700 Cnksr2 (ENSDORG00000010230) #29 Smpx (ENSDORG00000003075) #31 Mbtps2 (ENSDORG00000011065) #32 Yy2 (ENSDORG00000011068) ENSDORG00000016069 #33 ENSDORG00000025753 Phex (ENSDORG00000010976) #34 Ptchd1 (ENSDORG00000004212) #37 Rodentia_A ANCESTRAL SPECIES 9 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Hystricomorpha ANCESTRAL SPECIES 11 ENSGT00940000155485 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Hystricomorpha_a ANCESTRAL SPECIES 60 ENSGT00530000064238 ENSGT00910000144179.b.a #7 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000154763.mb ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 Hystricomorpha_b ANCESTRAL SPECIES 73 ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000154763.mb ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 Degu DUPLICATION Degu MODERN SPECIES 51 ENSODEG00000017773 #22 MAP3K15 (ENSODEG00000017836) #23 SH3KBP1 (ENSODEG00000017905) #24 BCLAF3 (ENSODEG00000018128) #25 ENSODEG00000017632 MAP7D2 (ENSODEG00000017740) #26 ENSODEG00000017687 #27 RPS6KA3 (ENSODEG00000017781) #28 C10orf82 (ENSODEG00000017640) HSPA12A (ENSODEG00000017751) ENO4 (ENSODEG00000017769) ENSODEG00000017934 ENSODEG00000017664 ENSODEG00000017629 VAX1 (ENSODEG00000017835) ENSODEG00000017686 Degu MODERN SPECIES 200 ENSODEG00000001487 ENSODEG00000001474 #22 ZDHHC13 (ENSODEG00000001434) CSRP3 (ENSODEG00000001395) E2F8 (ENSODEG00000001309) ENSODEG00000001265 NAV2 (ENSODEG00000001086) DBX1 (ENSODEG00000000930) HTATIP2 (ENSODEG00000000910) ENSODEG00000000894 PRMT3 (ENSODEG00000000824) SLC6A5 (ENSODEG00000000719) ENSODEG00000018648 NELL1 (ENSODEG00000000600) ENSODEG00000000998 ANO5 (ENSODEG00000000906) SLC17A6 (ENSODEG00000000829) Long-tailed chinchilla MODERN SPECIES 293 CDKL5 (ENSCLAG00000000414) #16 RS1 (ENSCLAG00000000386) #17 PPEF1 (ENSCLAG00000000360) #18 PHKA2 (ENSCLAG00000000312) #19 ADGRG2 (ENSCLAG00000000208) #20 PDHA1 (ENSCLAG00000000108) #22 MAP3K15 (ENSCLAG00000000098) #23 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 59 NHS (ENSCPOG00000020088) #12 ENSCPOG00000038636 RAI2 (ENSCPOG00000015535) #13 CDKL5 (ENSCPOG00000007438) #16 RS1 (ENSCPOG00000007446) #17 PPEF1 (ENSCPOG00000006617) #18 PHKA2 (ENSCPOG00000011064) #19 ADGRG2 (ENSCPOG00000011079) #20 ENSCPOG00000009280 #22 MAP3K15 (ENSCPOG00000011102) #23 SH3KBP1 (ENSCPOG00000006433) #24 BCLAF3 (ENSCPOG00000008695) #25 MAP7D2 (ENSCPOG00000008706) #26 EIF1AX (ENSCPOG00000039205) ##27 RPS6KA3 (ENSCPOG00000008719) #28 CNKSR2 (ENSCPOG00000009806) #29 KLHL34 (ENSCPOG00000035985) #30 SMPX (ENSCPOG00000033393) #31 MBTPS2 (ENSCPOG00000006171) #32 ENSCPOG00000006176 #33 PHEX (ENSCPOG00000006183) #34 ENSCPOG00000013960 PTCHD1 (ENSCPOG00000035225) #37 PRDX4 (ENSCPOG00000004185) Guinea pig MODERN SPECIES 49 ENSCPOG00000033799 ENSCPOG00000008532 ENSCPOG00000011552 ENSCPOG00000040037 CCNC (ENSCPOG00000011792) ENSCPOG00000032336 USP45 (ENSCPOG00000010267) PNISR (ENSCPOG00000033472) COQ3 (ENSCPOG00000005688) ENSCPOG00000026200 #22 FAXC (ENSCPOG00000005687) FBXL4 (ENSCPOG00000035819) POU3F2 (ENSCPOG00000003168) MMS22L (ENSCPOG00000039717) KLHL32 (ENSCPOG00000011948) NDUFAF4 (ENSCPOG00000031112) GPR63 (ENSCPOG00000005050) FHL5 (ENSCPOG00000002157) UFL1 (ENSCPOG00000006956) FUT9 (ENSCPOG00000003693) MANEA (ENSCPOG00000035608) EPHA7 (ENSCPOG00000003600) MAP3K7 (ENSCPOG00000008242) BACH2 (ENSCPOG00000030579) GJA10 (ENSCPOG00000009251) Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000036411 ENSHGLG00000001581 #29 KLHL34 (ENSHGLG00000020474) #30 ENSHGLG00000034421 SMPX (ENSHGLG00000050435) #31 ENSHGLG00000046622 MBTPS2 (ENSHGLG00000001714) #32 ENSHGLG00000001773 #33 PHEX (ENSHGLG00000003219) #34 ENSHGLG00000003413 #37 ENSHGLG00000033146 ENSHGLG00000020425 ENSHGLG00000000563 ENSHGLG00000050318 ENSHGLG00000044116 ENSHGLG00000000543 #22 ENSHGLG00000020000 ENSHGLG00000000584 #23 ENSHGLG00000000866 #24 ENSHGLG00000038256 BCLAF3 (ENSHGLG00000001058) #25 MAP7D2 (ENSHGLG00000001155) #26 ENSHGLG00000034312 #27 ENSHGLG00000001399 #28 ENSHGLG00000001460 ENSHGLG00000015862 #20 PHKA2 (ENSHGLG00000001760) #19 ENSHGLG00000001092 PPEF1 (ENSHGLG00000001185) #18 RS1 (ENSHGLG00000001057) #17 CDKL5 (ENSHGLG00000001743) #16 Sciuridae ANCESTRAL SPECIES 28 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Marmotini ANCESTRAL SPECIES 58 ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00940000153648.a.f ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 183 ENSMMMG00000004554 #22 ENSMMMG00000004548 ENSMMMG00000004540 Alpin marmot MODERN SPECIES 21 S100G (ENSMMMG00000005431) SYAP1 (ENSMMMG00000005440) #8 TXLNG (ENSMMMG00000005463) #9 RBBP7 (ENSMMMG00000005531) #10 REPS2 (ENSMMMG00000005603) #11 NHS (ENSMMMG00000005679) #12 ENSMMMG00000006065 RAI2 (ENSMMMG00000006069) #13 SCML2 (ENSMMMG00000006071) #15 ENSMMMG00000006089 CDKL5 (ENSMMMG00000006110) #16 RS1 (ENSMMMG00000006144) #17 PPEF1 (ENSMMMG00000006165) #18 PHKA2 (ENSMMMG00000006185) #19 ADGRG2 (ENSMMMG00000006314) #20 ENSMMMG00000007196 #22 MAP3K15 (ENSMMMG00000007247) #23 SH3KBP1 (ENSMMMG00000007298) #24 ENSMMMG00000007426 BCLAF3 (ENSMMMG00000007465) #25 ENSMMMG00000007500 MAP7D2 (ENSMMMG00000007516) #26 EIF1AX (ENSMMMG00000007975) #27 RPS6KA3 (ENSMMMG00000008009) #28 CNKSR2 (ENSMMMG00000008093) #29 KLHL34 (ENSMMMG00000008160) #30 SMPX (ENSMMMG00000008177) #31 MBTPS2 (ENSMMMG00000008190) #32 ENSMMMG00000008211 ENSMMMG00000008215 SMS (ENSMMMG00000008225) #33 Marmotini_b ANCESTRAL SPECIES 69 ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00940000153648.a.f ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256.j #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Squirrel MODERN SPECIES 444 ENSSTOG00000013450 CDKL5 (ENSSTOG00000014545) #16 RS1 (ENSSTOG00000014568) #17 PPEF1 (ENSSTOG00000005660) #18 PHKA2 (ENSSTOG00000013911) #19 ADGRG2 (ENSSTOG00000013926) #20 PDHA1 (ENSSTOG00000015433) #22 MAP3K15 (ENSSTOG00000027298) #23 Arctic ground squirrel MODERN SPECIES 319 PHKA2 (ENSUPAG00010017499) #19 ADGRG2 (ENSUPAG00010016925) #20 ENSUPAG00010016903 PDHA1 (ENSUPAG00010016887) #22 MAP3K15 (ENSUPAG00010016860) #23 SH3KBP1 (ENSUPAG00010016531) #24 BCLAF3 (ENSUPAG00010016497) #25 ENSUPAG00010016489 MAP7D2 (ENSUPAG00010016279) #26 ENSUPAG00010016262 #27 RPS6KA3 (ENSUPAG00010016233) #28 Eurasian red squirrel MODERN SPECIES 156 RBBP7 (ENSSVLG00005025916) #10 REPS2 (ENSSVLG00005025910) #11 ENSSVLG00005025908 ENSSVLG00005025906 NHS (ENSSVLG00005025902) #12 ENSSVLG00005025897 RAI2 (ENSSVLG00005025894) #13 ENSSVLG00005025889 SCML2 (ENSSVLG00005025874) #15 CDKL5 (ENSSVLG00005025859) #16 RS1 (ENSSVLG00005025848) #17 PPEF1 (ENSSVLG00005025839) #18 PHKA2 (ENSSVLG00005025821) #19 ADGRG2 (ENSSVLG00005025609) #20 ENSSVLG00005025413 PDHA1 (ENSSVLG00005025396) #22 MAP3K15 (ENSSVLG00005025353) #23 SH3KBP1 (ENSSVLG00005025277) #24 BCLAF3 (ENSSVLG00005025243) #25 ENSSVLG00005025223 ENSSVLG00005025208 MAP7D2 (ENSSVLG00005025072) #26 ENSSVLG00005024989 #27 RPS6KA3 (ENSSVLG00005024949) #28 CNKSR2 (ENSSVLG00005023957) #29 KLHL34 (ENSSVLG00005023744) #30 SMPX (ENSSVLG00005023721) #31 MBTPS2 (ENSSVLG00005023689) #32 ENSSVLG00005023659 ENSSVLG00005023650 SMS (ENSSVLG00005023626) #33 Lagomorpha ANCESTRAL SPECIES 49 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 ENSGT00940000153430.a.a Rabbit MODERN SPECIES 1401 ENSOCUG00000000681 #9 ENSOCUG00000000683 #10 REPS2 (ENSOCUG00000014665) #11 ENSOCUG00000031876 NHS (ENSOCUG00000013436) #12 ENSOCUG00000028121 ENSOCUG00000021853 RAI2 (ENSOCUG00000026517) #13 ENSOCUG00000013622 #14 SCML2 (ENSOCUG00000007351) #15 CDKL5 (ENSOCUG00000010775) #16 RS1 (ENSOCUG00000010796) #17 PHKA2 (ENSOCUG00000013782) #19 PPEF1 (ENSOCUG00000010801) #18 ADGRG2 (ENSOCUG00000007324) #20 PDHA1 (ENSOCUG00000014748) #22 MAP3K15 (ENSOCUG00000014758) #23 SH3KBP1 (ENSOCUG00000006268) #24 BCLAF3 (ENSOCUG00000015294) #25 MAP7D2 (ENSOCUG00000016736) #26 RPS6KA3 (ENSOCUG00000025948) #28 ENSOCUG00000027568 CNKSR2 (ENSOCUG00000014660) #29 KLHL34 (ENSOCUG00000014678) #30 SMPX (ENSOCUG00000001849) #31 MBTPS2 (ENSOCUG00000016386) #32 SMS (ENSOCUG00000006016) #33 PHEX (ENSOCUG00000006020) #34 ENSOCUG00000004437 PTCHD1 (ENSOCUG00000014375) #37 ENSOCUG00000032925 Pika MODERN SPECIES 1123 PDHA1 (ENSOPRG00000016091) #22 Tree shrew MODERN SPECIES 1409 PDHA1 (ENSTBEG00000014313) #22 MAP3K15 (ENSTBEG00000015203) #23 SH3KBP1 (ENSTBEG00000015837) #24 Primates ANCESTRAL SPECIES 19 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Haplorrhini ANCESTRAL SPECIES 18 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Simiiformes ANCESTRAL SPECIES 9 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000154152.d.a.b ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES 28 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000154152.d.a.b.b ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.a #22 ENSGT00940000159562 #23 ENSGT00940000155886.g #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00390000003791.g.b ENSGT00940000157080 #37 ENSGT00940000153430.a.a Cebidae ANCESTRAL SPECIES 18 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000154152.d.a.b.b ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.a #22 ENSGT00940000159562 #23 ENSGT00940000155886.g #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00390000003791.g.b ENSGT00940000157080 #37 ENSGT00940000153430.a.a Marmoset MODERN SPECIES 78 ENSCJAG00000080054 NHS (ENSCJAG00000004660) #12 ENSCJAG00000078610 ENSCJAG00000082727 ENSCJAG00000023313 RAI2 (ENSCJAG00000003685) #13 SCML2 (ENSCJAG00000005875) #15 CDKL5 (ENSCJAG00000005834) #16 RS1 (ENSCJAG00000005829) #17 PPEF1 (ENSCJAG00000005798) #18 PHKA2 (ENSCJAG00000005668) #19 ENSCJAG00000082522 ADGRG2 (ENSCJAG00000005571) #20 ENSCJAG00000072791 ENSCJAG00000073410 ENSCJAG00000005496 #22 ENSCJAG00000005459 #23 BCLAF3 (ENSCJAG00000045691) #25 ENSCJAG00000022320 ENSCJAG00000079762 MAP7D2 (ENSCJAG00000005383) #26 RPS6KA3 (ENSCJAG00000005239) #28 ENSCJAG00000005365 ENSCJAG00000073658 CNKSR2 (ENSCJAG00000005220) #29 KLHL34 (ENSCJAG00000041270) #30 SMPX (ENSCJAG00000005203) #31 MBTPS2 (ENSCJAG00000046733) #32 SMS (ENSCJAG00000033933) #33 PHEX (ENSCJAG00000005121) #34 ENSCJAG00000072524 Cebidae_a ANCESTRAL SPECIES 36 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C.eb.a #10 ENSGT00940000154152.d.a.b.b ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154174.s.a.b ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.a #22 ENSGT00940000159562 #23 ENSGT00940000155886.g #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00390000003791.g.b ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Bolivian squirrel monkey MODERN SPECIES 51 ENSSBOG00000036156 #9 RBBP7 (ENSSBOG00000033728) #10 ENSSBOG00000030543 REPS2 (ENSSBOG00000018047) #11 NHS (ENSSBOG00000032082) #12 SCML1 (ENSSBOG00000025279) ENSSBOG00000032775 BEND2 (ENSSBOG00000034571) SCML2 (ENSSBOG00000023475) #15 CDKL5 (ENSSBOG00000034927) #16 RS1 (ENSSBOG00000022074) #17 PPEF1 (ENSSBOG00000025564) #18 PHKA2 (ENSSBOG00000028848) #19 ADGRG2 (ENSSBOG00000036029) #20 PDHA1 (ENSSBOG00000021023) #22 MAP3K15 (ENSSBOG00000023444) #23 ENSSBOG00000026951 ENSSBOG00000036210 #24 BCLAF3 (ENSSBOG00000031024) #25 MAP7D2 (ENSSBOG00000029797) #26 ENSSBOG00000031558 #27 ENSSBOG00000029635 RPS6KA3 (ENSSBOG00000034830) #28 ENSSBOG00000018382 CNKSR2 (ENSSBOG00000029741) #29 SMPX (ENSSBOG00000033495) #31 MBTPS2 (ENSSBOG00000029363) #32 SMS (ENSSBOG00000024222) #33 ENSSBOG00000000154 PHEX (ENSSBOG00000035899) #34 Capuchin MODERN SPECIES 128 NHS (ENSCCAG00000015439) #12 SCML1 (ENSCCAG00000003357) ENSCCAG00000021224 BEND2 (ENSCCAG00000028740) SCML2 (ENSCCAG00000029741) #15 CDKL5 (ENSCCAG00000028839) #16 RS1 (ENSCCAG00000037547) #17 PPEF1 (ENSCCAG00000018308) #18 PHKA2 (ENSCCAG00000037761) #19 ADGRG2 (ENSCCAG00000021576) #20 ENSCCAG00000033194 ENSCCAG00000025967 ENSCCAG00000020724 #22 MAP3K15 (ENSCCAG00000019733) #23 ENSCCAG00000024335 #24 BCLAF3 (ENSCCAG00000021782) #25 MAP7D2 (ENSCCAG00000034873) #26 EIF1AX (ENSCCAG00000020517) #27 RPS6KA3 (ENSCCAG00000036661) #28 ENSCCAG00000026463 CNKSR2 (ENSCCAG00000029076) #29 ENSCCAG00000031773 SMPX (ENSCCAG00000028916) #31 ENSCCAG00000034966 MBTPS2 (ENSCCAG00000030619) #32 SMS (ENSCCAG00000038102) #33 PHEX (ENSCCAG00000021705) #34 ENSCCAG00000024171 Mas night monkey MODERN SPECIES 814 RBBP7 (ENSANAG00000037598) #10 ENSANAG00000020204 ENSANAG00000020664 ENSANAG00000022723 REPS2 (ENSANAG00000031037) #11 NHS (ENSANAG00000033727) #12 SCML1 (ENSANAG00000021893) ENSANAG00000019386 ENSANAG00000037962 SCML2 (ENSANAG00000020966) #15 CDKL5 (ENSANAG00000034696) #16 RS1 (ENSANAG00000029033) #17 PPEF1 (ENSANAG00000023404) #18 PHKA2 (ENSANAG00000038435) #19 ADGRG2 (ENSANAG00000034597) #20 PDHA1 (ENSANAG00000030855) #22 MAP3K15 (ENSANAG00000034023) #23 ENSANAG00000030233 ENSANAG00000034832 #24 ENSANAG00000026646 #25 MAP7D2 (ENSANAG00000037417) #26 ENSANAG00000030856 #27 ENSANAG00000025820 RPS6KA3 (ENSANAG00000026591) #28 ENSANAG00000000067 ENSANAG00000019923 CNKSR2 (ENSANAG00000030385) #29 KLHL34 (ENSANAG00000020210) #30 SMPX (ENSANAG00000035900) #31 ENSANAG00000034743 MBTPS2 (ENSANAG00000022738) #32 Platyrrhini ANCESTRAL SPECIES ENSGT00530000063174.a.i.b #22 Cebidae ANCESTRAL SPECIES 33 ENSGT00940000157289.a.a.b ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 ENSGT00940000157075 ENSGT00940000154843.F ENSGT00390000004886 ENSGT00940000158768 ENSGT00940000156920 ENSGT00390000016974 ENSGT00390000003564 ENSGT00530000063174.a.i.b #22 ENSGT00940000157040 ENSGT00940000163455 ENSGT00950000182848.c.b.a.a ENSGT00940000156849 ENSGT00940000163315 ENSGT00390000001263 ENSGT00940000154772.r ENSGT00940000156581 ENSGT00390000006777.b ENSGT00530000063859.a ENSGT01050000244838.C.a ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158284 Cebidae_a ANCESTRAL SPECIES 42 ENSGT00940000157289.a.a.b ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 ENSGT00940000157075 ENSGT00940000154843.F ENSGT00390000004886 ENSGT00940000158768 ENSGT00940000156920 ENSGT00390000016974 ENSGT00390000003564 ENSGT00530000063174.a.i.b #22 ENSGT00940000157040 ENSGT00940000163455 ENSGT00950000182848.c.b.a.a ENSGT00390000001231.s.a.c ENSGT00940000156849 ENSGT00940000163315 ENSGT00390000001263 ENSGT00940000154772.r ENSGT00940000156581 ENSGT00390000006777.b ENSGT00530000063859.a ENSGT01050000244838.C.a ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 Capuchin MODERN SPECIES 43 NRN1 (ENSCCAG00000024735) F13A1 (ENSCCAG00000036141) LY86 (ENSCCAG00000020400) RREB1 (ENSCCAG00000021905) SSR1 (ENSCCAG00000030293) CAGE1 (ENSCCAG00000037882) RIOK1 (ENSCCAG00000024061) ENSCCAG00000033486 DSP (ENSCCAG00000002153) SNRNP48 (ENSCCAG00000035652) BMP6 (ENSCCAG00000024255) TXNDC5 (ENSCCAG00000022735) BLOC1S5 (ENSCCAG00000023842) ENSCCAG00000031071 ENSCCAG00000035126 #22 SLC35B3 (ENSCCAG00000026344) ENSCCAG00000026536 ENSCCAG00000026702 TFAP2A (ENSCCAG00000036532) ENSCCAG00000029494 ENSCCAG00000024728 GCNT2 (ENSCCAG00000038039) C6orf52 (ENSCCAG00000025777) PAK1IP1 (ENSCCAG00000030045) TMEM14C (ENSCCAG00000030819) MAK (ENSCCAG00000028841) GCM2 (ENSCCAG00000029665) SYCP2L (ENSCCAG00000027217) ELOVL2 (ENSCCAG00000020667) SMIM13 (ENSCCAG00000001111) Marmoset MODERN SPECIES 16 RREB1 (ENSCJAG00000021358) SSR1 (ENSCJAG00000044370) CAGE1 (ENSCJAG00000021351) RIOK1 (ENSCJAG00000042960) DSP (ENSCJAG00000021333) SNRNP48 (ENSCJAG00000021330) ENSCJAG00000077015 ENSCJAG00000074889 ENSCJAG00000056342 BMP6 (ENSCJAG00000021326) TXNDC5 (ENSCJAG00000021322) ENSCJAG00000069775 ENSCJAG00000069672 BLOC1S5 (ENSCJAG00000010580) EEF1E1 (ENSCJAG00000079478) ENSCJAG00000080871 #22 SLC35B3 (ENSCJAG00000021320) ENSCJAG00000083524 ENSCJAG00000073361 ENSCJAG00000071644 ENSCJAG00000072059 ENSCJAG00000085139 ENSCJAG00000072812 ENSCJAG00000082762 TFAP2A (ENSCJAG00000021312) ENSCJAG00000021709 ENSCJAG00000069812 ENSCJAG00000075197 ENSCJAG00000076215 ENSCJAG00000001070 ENSCJAG00000076671 Catarrhini ANCESTRAL SPECIES 12 ENSGT00940000154152.d.a.b ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00910000148115 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Hominoidea ANCESTRAL SPECIES 16 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00910000148115 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000167221 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Hominidae ANCESTRAL SPECIES 8 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00910000148115 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.pb #33 ENSGT00940000157313 #34 ENSGT00940000167221 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00910000148115 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.pb #33 ENSGT00940000157313 #34 ENSGT00940000167221 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Gorilla DUPLICATION Gorilla MODERN SPECIES 523 SYAP1 (ENSGGOG00000001309) #8 TXLNG (ENSGGOG00000002388) #9 ENSGGOG00000044025 REPS2 (ENSGGOG00000016013) #11 ENSGGOG00000022186 NHS (ENSGGOG00000000704) #12 SCML1 (ENSGGOG00000003874) BEND2 (ENSGGOG00000003458) SCML2 (ENSGGOG00000015959) #15 CDKL5 (ENSGGOG00000010796) #16 RS1 (ENSGGOG00000023949) #17 PPEF1 (ENSGGOG00000003393) #18 PHKA2 (ENSGGOG00000003407) #19 ADGRG2 (ENSGGOG00000003424) #20 ENSGGOG00000040627 ENSGGOG00000013574 #22 MAP3K15 (ENSGGOG00000008317) #23 SH3KBP1 (ENSGGOG00000008333) #24 BCLAF3 (ENSGGOG00000009453) #25 MAP7D2 (ENSGGOG00000007760) #26 ENSGGOG00000012186 #27 RPS6KA3 (ENSGGOG00000008837) #28 CNKSR2 (ENSGGOG00000013768) #29 KLHL34 (ENSGGOG00000002780) #30 SMPX (ENSGGOG00000004353) #31 MBTPS2 (ENSGGOG00000012064) #32 ENSGGOG00000003123 #33 ENSGGOG00000003961 #34 CBLL2 (ENSGGOG00000034821) ENSGGOG00000026912 ENSGGOG00000036181 Gorilla MODERN SPECIES 122 ENSGGOG00000041347 #22 Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000167584 ENSGT00870000136506.pb #33 ENSGT00940000157313 #34 ENSGT00940000167221 ENSGT00940000157080 #37 Pan ANCESTRAL SPECIES 6 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00940000154152.d.a.b ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000167584 ENSGT00870000136506.pb #33 ENSGT00940000157313 #34 ENSGT00940000166413 ENSGT00940000167221 Bonobo MODERN SPECIES 369 TXLNG (ENSPPAG00000034208) #9 RBBP7 (ENSPPAG00000036647) #10 REPS2 (ENSPPAG00000037795) #11 ENSPPAG00000031475 ENSPPAG00000004504 NHS (ENSPPAG00000031794) #12 SCML1 (ENSPPAG00000031177) BEND2 (ENSPPAG00000032642) SCML2 (ENSPPAG00000039952) #15 CDKL5 (ENSPPAG00000027668) #16 RS1 (ENSPPAG00000040996) #17 PPEF1 (ENSPPAG00000027881) #18 ENSPPAG00000027509 PHKA2 (ENSPPAG00000036527) #19 ADGRG2 (ENSPPAG00000044060) #20 PDHA1 (ENSPPAG00000032993) #22 MAP3K15 (ENSPPAG00000039708) #23 SH3KBP1 (ENSPPAG00000037769) #24 BCLAF3 (ENSPPAG00000040123) #25 MAP7D2 (ENSPPAG00000040804) #26 EIF1AX (ENSPPAG00000033962) #27 RPS6KA3 (ENSPPAG00000029748) #28 CNKSR2 (ENSPPAG00000037182) #29 KLHL34 (ENSPPAG00000025617) #30 SMPX (ENSPPAG00000030194) #31 MBTPS2 (ENSPPAG00000033207) #32 YY2 (ENSPPAG00000033052) ENSPPAG00000035805 #33 PHEX (ENSPPAG00000012368) #34 CBLL2 (ENSPPAG00000006152) ENSPPAG00000031560 Chimpanzee MODERN SPECIES 972 TXLNG (ENSPTRG00000021701) #9 RBBP7 (ENSPTRG00000021702) #10 REPS2 (ENSPTRG00000021703) #11 ENSPTRG00000052150 ENSPTRG00000047191 NHS (ENSPTRG00000021705) #12 SCML1 (ENSPTRG00000021706) BEND2 (ENSPTRG00000021708) SCML2 (ENSPTRG00000021710) #15 CDKL5 (ENSPTRG00000021711) #16 RS1 (ENSPTRG00000021713) #17 PPEF1 (ENSPTRG00000021714) #18 ENSPTRG00000046843 PHKA2 (ENSPTRG00000021715) #19 ADGRG2 (ENSPTRG00000021716) #20 PDHA1 (ENSPTRG00000021717) #22 MAP3K15 (ENSPTRG00000022605) #23 SH3KBP1 (ENSPTRG00000048773) #24 BCLAF3 (ENSPTRG00000021725) #25 MAP7D2 (ENSPTRG00000021727) #26 ENSPTRG00000021728 #27 RPS6KA3 (ENSPTRG00000052293) #28 CNKSR2 (ENSPTRG00000021731) #29 KLHL34 (ENSPTRG00000021733) #30 SMPX (ENSPTRG00000047975) #31 MBTPS2 (ENSPTRG00000021735) #32 ENSPTRG00000044028 #33 PHEX (ENSPTRG00000021737) #34 CBLL2 (ENSPTRG00000028314) ENSPTRG00000047608 DDX53 (ENSPTRG00000028313) Human MODERN SPECIES 1827 S100G (ENSG00000169906) SYAP1 (ENSG00000169895) #8 TXLNG (ENSG00000086712) #9 RBBP7 (ENSG00000102054) #10 REPS2 (ENSG00000169891) #11 NHS (ENSG00000188158) #12 SCML1 (ENSG00000047634) RAI2 (ENSG00000131831) #13 BEND2 (ENSG00000177324) SCML2 (ENSG00000102098) #15 CDKL5 (ENSG00000008086) #16 RS1 (ENSG00000102104) #17 PPEF1 (ENSG00000086717) #18 PHKA2 (ENSG00000044446) #19 ADGRG2 (ENSG00000173698) #20 PDHA1 (ENSG00000131828) #22 MAP3K15 (ENSG00000180815) #23 SH3KBP1 (ENSG00000147010) #24 BCLAF3 (ENSG00000173681) #25 MAP7D2 (ENSG00000184368) #26 EIF1AX (ENSG00000173674) #27 RPS6KA3 (ENSG00000177189) #28 CNKSR2 (ENSG00000149970) #29 KLHL34 (ENSG00000185915) #30 SMPX (ENSG00000091482) #31 MBTPS2 (ENSG00000012174) #32 YY2 (ENSG00000230797) SMS (ENSG00000102172) #33 PHEX (ENSG00000102174) #34 CBLL2 (ENSG00000175809) DDX53 (ENSG00000184735) Orangutan MODERN SPECIES 242 TXLNG (ENSPPYG00000020157) #9 RBBP7 (ENSPPYG00000020158) #10 REPS2 (ENSPPYG00000020159) #11 ENSPPYG00000020160 NHS (ENSPPYG00000020161) #12 SCML1 (ENSPPYG00000020162) RAI2 (ENSPPYG00000020163) #13 BEND2 (ENSPPYG00000020164) SCML2 (ENSPPYG00000020165) #15 CDKL5 (ENSPPYG00000020166) #16 RS1 (ENSPPYG00000020167) #17 PPEF1 (ENSPPYG00000020168) #18 ENSPPYG00000038507 PHKA2 (ENSPPYG00000020169) #19 ADGRG2 (ENSPPYG00000020170) #20 PDHA1 (ENSPPYG00000020171) #22 MAP3K15 (ENSPPYG00000020172) #23 SH3KBP1 (ENSPPYG00000020173) #24 BCLAF3 (ENSPPYG00000020174) #25 MAP7D2 (ENSPPYG00000020175) #26 EIF1AX (ENSPPYG00000038921) #27 RPS6KA3 (ENSPPYG00000020177) #28 CNKSR2 (ENSPPYG00000020178) #29 KLHL34 (ENSPPYG00000020179) #30 SMPX (ENSPPYG00000020180) #31 MBTPS2 (ENSPPYG00000020181) #32 SMS (ENSPPYG00000020182) #33 PHEX (ENSPPYG00000020183) #34 CBLL2 (ENSPPYG00000020184) ENSPPYG00000036724 DDX53 (ENSPPYG00000020185) Gibbon MODERN SPECIES 449 ENSNLEG00000032743 RBBP7 (ENSNLEG00000009557) #10 REPS2 (ENSNLEG00000009591) #11 ENSNLEG00000029607 NHS (ENSNLEG00000009610) #12 SCML1 (ENSNLEG00000009621) BEND2 (ENSNLEG00000009644) SCML2 (ENSNLEG00000009648) #15 ENSNLEG00000027405 CDKL5 (ENSNLEG00000009674) #16 RS1 (ENSNLEG00000009691) #17 PPEF1 (ENSNLEG00000009696) #18 ENSNLEG00000029919 PHKA2 (ENSNLEG00000009732) #19 ADGRG2 (ENSNLEG00000009745) #20 PDHA1 (ENSNLEG00000009805) #22 MAP3K15 (ENSNLEG00000009849) #23 SH3KBP1 (ENSNLEG00000009860) #24 BCLAF3 (ENSNLEG00000009878) #25 ENSNLEG00000009882 MAP7D2 (ENSNLEG00000009884) #26 ENSNLEG00000009913 #27 RPS6KA3 (ENSNLEG00000009925) #28 CNKSR2 (ENSNLEG00000009933) #29 SMPX (ENSNLEG00000009938) #31 MBTPS2 (ENSNLEG00000009943) #32 SMS (ENSNLEG00000009955) #33 PHEX (ENSNLEG00000009980) #34 ENSNLEG00000018743 ENSNLEG00000027485 PTCHD1 (ENSNLEG00000010004) #37 Cercopithecidae ANCESTRAL SPECIES 27 ENSGT00940000154748.C #10 ENSGT00940000154152.d.a.b ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00910000148115 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00940000154748.C #10 ENSGT00940000154152.d.a.b ENSGT00940000158080 #11 ENSGT00940000154185.l.a.a.b ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Cercopithecinae_a DUPLICATION Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000154152.d.a.b ENSGT00940000158080 #11 ENSGT00940000154185.l.a.a.b ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.b.b.a.a.b.a.a.a.b.b.a.a.b.b.a.a.b.a.b.b.a ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.e #22 ENSGT00940000159562.e.a #23 ENSGT00940000159562.e.b #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Macaca ANCESTRAL SPECIES 29 ENSGT00940000154748.C.cb #10 ENSGT00940000158080 #11 ENSGT00940000154185.l.a.a.b ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.b.b.a.a.b.a.a.a.b.b.a.a.b.b.a.a.b.a.b.b.a ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.e #22 ENSGT00940000159562.e.b #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Pig-tailed macaque MODERN SPECIES 549 SYAP1 (ENSMNEG00000038782) #8 TXLNG (ENSMNEG00000040658) #9 RBBP7 (ENSMNEG00000031240) #10 REPS2 (ENSMNEG00000028017) #11 ENSMNEG00000022446 NHS (ENSMNEG00000032198) #12 SCML1 (ENSMNEG00000032587) BEND2 (ENSMNEG00000036925) SCML2 (ENSMNEG00000011431) #15 CDKL5 (ENSMNEG00000004730) #16 RS1 (ENSMNEG00000043209) #17 PPEF1 (ENSMNEG00000034590) #18 ENSMNEG00000028824 PHKA2 (ENSMNEG00000039386) #19 ADGRG2 (ENSMNEG00000043949) #20 ENSMNEG00000043035 #22 MAP3K15 (ENSMNEG00000029196) #23 SH3KBP1 (ENSMNEG00000037170) #24 ENSMNEG00000039258 BCLAF3 (ENSMNEG00000044107) #25 MAP7D2 (ENSMNEG00000042827) #26 EIF1AX (ENSMNEG00000035197) #27 RPS6KA3 (ENSMNEG00000013736) #28 CNKSR2 (ENSMNEG00000033243) #29 KLHL34 (ENSMNEG00000004752) #30 SMPX (ENSMNEG00000044214) #31 MBTPS2 (ENSMNEG00000018031) #32 ENSMNEG00000036966 SMS (ENSMNEG00000030826) #33 PHEX (ENSMNEG00000030561) #34 PTCHD1 (ENSMNEG00000031256) #37 Macaca_a ANCESTRAL SPECIES 11 ENSGT00940000154748.C.cb #10 ENSGT00940000158080 #11 ENSGT00910000148084 ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.b.b.a.a.b.a.a.a.b.b.a.a.b.b.a.a.b.a.b.b.a ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000164688 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.e #22 ENSGT00940000159562.e.b #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000164709.a.b.b.a.b.b.b.a.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT01050000244986.b.b.d.a.b ENSGT00940000167221 Crab-eating macaque MODERN SPECIES 175 ENSMFAG00000045438 NHS (ENSMFAG00000033586) #12 ENSMFAG00000057357 ENSMFAG00000057834 SCML1 (ENSMFAG00000038986) RAI2 (ENSMFAG00000001310) #13 ENSMFAG00000065282 BEND2 (ENSMFAG00000036840) SCML2 (ENSMFAG00000042495) #15 CDKL5 (ENSMFAG00000030921) #16 RS1 (ENSMFAG00000003687) #17 PPEF1 (ENSMFAG00000032152) #18 ENSMFAG00000034482 PHKA2 (ENSMFAG00000044106) #19 ADGRG2 (ENSMFAG00000001073) #20 PDHA1 (ENSMFAG00000043170) #22 ENSMFAG00000058383 #23 ENSMFAG00000000869 #23 SH3KBP1 (ENSMFAG00000002962) #24 ENSMFAG00000021756 BCLAF3 (ENSMFAG00000003230) #25 MAP7D2 (ENSMFAG00000055804) #26 ENSMFAG00000060557 #27 RPS6KA3 (ENSMFAG00000045085) #28 ENSMFAG00000061291 ENSMFAG00000052941 CNKSR2 (ENSMFAG00000037951) #29 SMPX (ENSMFAG00000040826) #31 MBTPS2 (ENSMFAG00000042182) #32 SMS (ENSMFAG00000039117) #33 PHEX (ENSMFAG00000045722) #34 Rhesus MODERN SPECIES 327 TXLNG (ENSMMUG00000016237) #9 RBBP7 (ENSMMUG00000016238) #10 REPS2 (ENSMMUG00000010598) #11 ENSMMUG00000058988 NHS (ENSMMUG00000012894) #12 ENSMMUG00000060776 SCML1 (ENSMMUG00000012899) RAI2 (ENSMMUG00000001433) #13 BEND2 (ENSMMUG00000019969) SCML2 (ENSMMUG00000005084) #15 CDKL5 (ENSMMUG00000005063) #16 RS1 (ENSMMUG00000005065) #17 PPEF1 (ENSMMUG00000005066) #18 PHKA2 (ENSMMUG00000020513) #19 ADGRG2 (ENSMMUG00000020515) #20 PDHA1 (ENSMMUG00000017336) #22 MAP3K15 (ENSMMUG00000061236) #23 SH3KBP1 (ENSMMUG00000004744) #24 ENSMMUG00000010727 BCLAF3 (ENSMMUG00000004745) #25 MAP7D2 (ENSMMUG00000000192) #26 EIF1AX (ENSMMUG00000051148) #27 RPS6KA3 (ENSMMUG00000002134) #28 ENSMMUG00000063057 CNKSR2 (ENSMMUG00000007500) #29 KLHL34 (ENSMMUG00000007501) #30 SMPX (ENSMMUG00000057558) #31 YY2 (ENSMMUG00000022467) ENSMMUG00000051932 SMS (ENSMMUG00000020392) #33 PHEX (ENSMMUG00000023589) #34 Cercopithecinae_b ANCESTRAL SPECIES 35 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C.cb #10 ENSGT00940000154152.d.a.b ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.e #22 ENSGT00940000159562.f #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00940000153558.b.i.b.a.a.b ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT01050000244986.b.b.d.a.b ENSGT00940000167221 Olive baboon MODERN SPECIES 792 ENSPANG00000046631 ENSPANG00000008870 ENSPANG00000050113 ENSPANG00000047189 NHS (ENSPANG00000007897) #12 SCML1 (ENSPANG00000010972) RAI2 (ENSPANG00000015463) #13 SCML2 (ENSPANG00000018991) #15 ENSPANG00000041187 CDKL5 (ENSPANG00000004460) #16 ENSPANG00000035243 PPEF1 (ENSPANG00000010228) #18 ENSPANG00000029606 PHKA2 (ENSPANG00000016122) #19 ADGRG2 (ENSPANG00000004239) #20 ENSPANG00000035301 #22 MAP3K15 (ENSPANG00000007384) #23 SH3KBP1 (ENSPANG00000006736) #24 BCLAF3 (ENSPANG00000004509) #25 MAP7D2 (ENSPANG00000019661) #26 EIF1AX (ENSPANG00000030224) #27 RPS6KA3 (ENSPANG00000016330) #28 ENSPANG00000006351 ENSPANG00000029508 CNKSR2 (ENSPANG00000011941) #29 KLHL34 (ENSPANG00000012353) #30 SMPX (ENSPANG00000005741) #31 ENSPANG00000050152 MBTPS2 (ENSPANG00000024280) #32 SMS (ENSPANG00000003155) #33 PHEX (ENSPANG00000010105) #34 Cercopithecinae_d ANCESTRAL SPECIES 51 ENSGT00910000144179.b.a #7 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C.cb #10 ENSGT00940000154152.d.a.b ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164589 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00940000167769 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i.e #22 ENSGT00940000159562.f #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00940000153558.b.i.b.a.a.b ENSGT00510000048066 #32 ENSGT00870000136506.ob.b #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Sooty mangabey MODERN SPECIES 448 SYAP1 (ENSCATG00000044882) #8 TXLNG (ENSCATG00000032410) #9 RBBP7 (ENSCATG00000042741) #10 ENSCATG00000037187 REPS2 (ENSCATG00000041359) #11 NHS (ENSCATG00000033217) #12 SCML1 (ENSCATG00000006222) BEND2 (ENSCATG00000036336) SCML2 (ENSCATG00000038994) #15 CDKL5 (ENSCATG00000041616) #16 RS1 (ENSCATG00000029796) #17 PPEF1 (ENSCATG00000043035) #18 ENSCATG00000037972 PHKA2 (ENSCATG00000044694) #19 ADGRG2 (ENSCATG00000035439) #20 PDHA1 (ENSCATG00000044567) #22 MAP3K15 (ENSCATG00000024304) #23 SH3KBP1 (ENSCATG00000034119) #24 BCLAF3 (ENSCATG00000039065) #25 MAP7D2 (ENSCATG00000042697) #26 EIF1AX (ENSCATG00000033237) #27 RPS6KA3 (ENSCATG00000036143) #28 ENSCATG00000035316 CNKSR2 (ENSCATG00000035326) #29 KLHL34 (ENSCATG00000014878) #30 SMPX (ENSCATG00000043293) #31 ENSCATG00000037334 MBTPS2 (ENSCATG00000031542) #32 SMS (ENSCATG00000032661) #33 PHEX (ENSCATG00000031574) #34 CBLL2 (ENSCATG00000014814) Drill MODERN SPECIES 1190 SCML2 (ENSMLEG00000007077) #15 CDKL5 (ENSMLEG00000038004) #16 RS1 (ENSMLEG00000024203) #17 PPEF1 (ENSMLEG00000035187) #18 ENSMLEG00000025963 PHKA2 (ENSMLEG00000029623) #19 ADGRG2 (ENSMLEG00000030833) #20 ENSMLEG00000033588 #22 MAP3K15 (ENSMLEG00000028673) #23 SH3KBP1 (ENSMLEG00000038375) #24 BCLAF3 (ENSMLEG00000016996) #25 MAP7D2 (ENSMLEG00000018058) #26 EIF1AX (ENSMLEG00000031392) #27 RPS6KA3 (ENSMLEG00000034063) #28 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00530000063174.a.i.f #22 Macaca ANCESTRAL SPECIES 17 ENSGT00940000154864.b ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a ENSGT00390000014001.a ENSGT00940000157837 ENSGT00940000157361 ENSGT00940000158042 ENSGT00390000005537 ENSGT00530000063174.a.i.f #22 ENSGT00910000147025 ENSGT00940000156983.a.a ENSGT01030000234579.A.b.w ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000018318.u.b.a.b.a.a.a ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 Pig-tailed macaque MODERN SPECIES 341 EML6 (ENSMNEG00000042682) RTN4 (ENSMNEG00000029510) CLHC1 (ENSMNEG00000027284) RPS27A (ENSMNEG00000037303) MTIF2 (ENSMNEG00000034768) ENSMNEG00000038538 CCDC88A (ENSMNEG00000038308) CFAP36 (ENSMNEG00000039806) PPP4R3B (ENSMNEG00000030876) PNPT1 (ENSMNEG00000038589) EFEMP1 (ENSMNEG00000043412) ENSMNEG00000004015 CCDC85A (ENSMNEG00000041770) VRK2 (ENSMNEG00000042551) FANCL (ENSMNEG00000028810) ENSMNEG00000044442 #22 BCL11A (ENSMNEG00000040327) ENSMNEG00000036604 ENSMNEG00000041584 PAPOLG (ENSMNEG00000035939) REL (ENSMNEG00000042843) PUS10 (ENSMNEG00000043877) PEX13 (ENSMNEG00000030840) SANBR (ENSMNEG00000041924) ENSMNEG00000033482 C2orf74 (ENSMNEG00000028498) ENSMNEG00000042228 ENSMNEG00000036948 ENSMNEG00000036676 USP34 (ENSMNEG00000039067) XPO1 (ENSMNEG00000030909) Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a ENSGT00390000014001.a.b ENSGT00940000157837 ENSGT00940000157361 ENSGT00950000182895.a.b.j.b.e.a ENSGT00940000158042 ENSGT00390000005537 ENSGT00530000063174.a.i.f #22 ENSGT00940000156983.a.a ENSGT01030000234579.A.b.w ENSGT00390000008802.m.a.a ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000155413.l.a.b ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 Cercopithecinae_d ANCESTRAL SPECIES 32 ENSGT00940000154864.b ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a ENSGT00390000014001.a.b ENSGT00940000157837 ENSGT00940000157361 ENSGT00940000158042 ENSGT00390000005537 ENSGT00530000063174.a.i.f #22 ENSGT00940000156983.a.a ENSGT01030000234579.A.b.w ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000155413.l.a.b ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.a Drill MODERN SPECIES 1245 VRK2 (ENSMLEG00000032178) FANCL (ENSMLEG00000031190) ENSMLEG00000038186 #22 BCL11A (ENSMLEG00000035855) ENSMLEG00000030509 PAPOLG (ENSMLEG00000039462) ENSMLEG00000035996 REL (ENSMLEG00000009298) ENSMLEG00000037480 Olive baboon MODERN SPECIES 5 RPS27A (ENSPANG00000034863) MTIF2 (ENSPANG00000014549) ENSPANG00000000623 CCDC88A (ENSPANG00000021274) PPP4R3B (ENSPANG00000022844) CFAP36 (ENSPANG00000022522) ENSPANG00000038384 ENSPANG00000031278 EFEMP1 (ENSPANG00000022521) ENSPANG00000041504 ENSPANG00000043733 CCDC85A (ENSPANG00000016914) ENSPANG00000010717 VRK2 (ENSPANG00000014544) FANCL (ENSPANG00000021497) ENSPANG00000021826 #22 BCL11A (ENSPANG00000018170) ENSPANG00000000672 PAPOLG (ENSPANG00000014543) REL (ENSPANG00000006148) PUS10 (ENSPANG00000018036) PEX13 (ENSPANG00000022181) ENSPANG00000017323 ENSPANG00000039323 C2orf74 (ENSPANG00000035894) ENSPANG00000016913 USP34 (ENSPANG00000025375) XPO1 (ENSPANG00000006892) FAM161A (ENSPANG00000010259) CCT4 (ENSPANG00000019105) COMMD1 (ENSPANG00000006093) Rhinopithecus ANCESTRAL SPECIES 500 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00910000148115 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b.c #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 Golden snub-nosed monkey MODERN SPECIES 2712 ADGRG2 (ENSRROG00000031914) #20 PDHA1 (ENSRROG00000021554) #22 MAP3K15 (ENSRROG00000040875) #23 ENSRROG00000038162 SH3KBP1 (ENSRROG00000034116) #24 BCLAF3 (ENSRROG00000036962) #25 Black snub-nosed monkey MODERN SPECIES 2277 PHKA2 (ENSRBIG00000038528) #19 ADGRG2 (ENSRBIG00000044766) #20 ENSRBIG00000040603 PDHA1 (ENSRBIG00000027799) #22 Tarsier MODERN SPECIES 1277 PDHA1 (ENSTSYG00000006218) #22 Strepsirrhini ANCESTRAL SPECIES 23 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066.b #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Bushbaby MODERN SPECIES 166 SYAP1 (ENSOGAG00000028403) #8 TXLNG (ENSOGAG00000014991) #9 RBBP7 (ENSOGAG00000014995) #10 ENSOGAG00000000865 #11 NHS (ENSOGAG00000017089) #12 ENSOGAG00000017092 RAI2 (ENSOGAG00000017095) #13 ENSOGAG00000012713 #14 SCML2 (ENSOGAG00000012455) #15 ENSOGAG00000031862 CDKL5 (ENSOGAG00000002429) #16 RS1 (ENSOGAG00000002430) #17 PPEF1 (ENSOGAG00000002431) #18 PHKA2 (ENSOGAG00000002436) #19 ADGRG2 (ENSOGAG00000011733) #20 PDHA1 (ENSOGAG00000002466) #22 MAP3K15 (ENSOGAG00000002467) #23 SH3KBP1 (ENSOGAG00000002469) #24 BCLAF3 (ENSOGAG00000008168) #25 MAP7D2 (ENSOGAG00000008176) #26 ENSOGAG00000033040 ENSOGAG00000008182 #27 RPS6KA3 (ENSOGAG00000008184) #28 ENSOGAG00000032783 CNKSR2 (ENSOGAG00000015464) #29 KLHL34 (ENSOGAG00000027270) #30 SMPX (ENSOGAG00000015469) #31 MBTPS2 (ENSOGAG00000011151) #32 ENSOGAG00000010892 #33 PHEX (ENSOGAG00000010894) #34 ENSOGAG00000026282 Lemuriformes ANCESTRAL SPECIES 48 ENSGT00940000164194 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066.b #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 ENSGT00940000153430.a.a ENSGT00390000005330 Mouse lemur MODERN SPECIES 169 ENSMICG00000043954 CTPS2 (ENSMICG00000010839) #7 S100G (ENSMICG00000034068) SYAP1 (ENSMICG00000000435) #8 TXLNG (ENSMICG00000000438) #9 RBBP7 (ENSMICG00000000440) #10 REPS2 (ENSMICG00000003790) #11 NHS (ENSMICG00000036975) #12 ENSMICG00000027086 SCML2 (ENSMICG00000027531) #15 CDKL5 (ENSMICG00000004179) #16 RS1 (ENSMICG00000004198) #17 PPEF1 (ENSMICG00000004203) #18 PHKA2 (ENSMICG00000004212) #19 ADGRG2 (ENSMICG00000004232) #20 PDHA1 (ENSMICG00000004067) #22 MAP3K15 (ENSMICG00000004080) #23 SH3KBP1 (ENSMICG00000004092) #24 BCLAF3 (ENSMICG00000004101) #25 MAP7D2 (ENSMICG00000004105) #26 EIF1AX (ENSMICG00000004110) #27 RPS6KA3 (ENSMICG00000004112) #28 CNKSR2 (ENSMICG00000002912) #29 KLHL34 (ENSMICG00000028251) #30 SMPX (ENSMICG00000008915) #31 ENSMICG00000044479 MBTPS2 (ENSMICG00000008917) #32 ENSMICG00000030382 ENSMICG00000037442 ENSMICG00000000192 #33 PHEX (ENSMICG00000000193) #34 Lemuriformes_a ANCESTRAL SPECIES 204 ENSGT00940000159407 #15 ENSGT00940000153528.a.b.a.b ENSGT01090000260070.A ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 505 ENSPCOG00000006194 ENSPCOG00000024633 #15 CDKL5 (ENSPCOG00000022705) #16 RS1 (ENSPCOG00000018582) #17 PPEF1 (ENSPCOG00000013904) #18 PHKA2 (ENSPCOG00000021054) #19 ADGRG2 (ENSPCOG00000022020) #20 ENSPCOG00000020305 #22 MAP3K15 (ENSPCOG00000005414) #23 SH3KBP1 (ENSPCOG00000019893) #24 BCLAF3 (ENSPCOG00000028321) #25 MAP7D2 (ENSPCOG00000012090) #26 ENSPCOG00000020014 #27 Coquerels sifaka MODERN SPECIES 274 PTX3 (ENSPCOG00000024857) CCNL1 (ENSPCOG00000015763) LEKR1 (ENSPCOG00000008154) TIPARP (ENSPCOG00000018471) SSR3 (ENSPCOG00000017371) KCNAB1 (ENSPCOG00000013343) GMPS (ENSPCOG00000024460) SLC33A1 (ENSPCOG00000021978) C3orf33 (ENSPCOG00000007724) PLCH1 (ENSPCOG00000028591) STRIT1 (ENSPCOG00000015379) MME (ENSPCOG00000013543) GPR149 (ENSPCOG00000027399) ENSPCOG00000011695 ARHGEF26 (ENSPCOG00000012536) ENSPCOG00000022566 #22 RAP2B (ENSPCOG00000009740) P2RY1 (ENSPCOG00000026439) MBNL1 (ENSPCOG00000023511) SUCNR1 (ENSPCOG00000019814) AADACL2 (ENSPCOG00000003911) IGSF10 (ENSPCOG00000018106) MED12L (ENSPCOG00000020951) P2RY12 (ENSPCOG00000011471) P2RY13 (ENSPCOG00000022030) GPR87 (ENSPCOG00000025356) CLRN1 (ENSPCOG00000005621) MINDY4B (ENSPCOG00000027685) SIAH2 (ENSPCOG00000013552) ERICH6 (ENSPCOG00000017914) SELENOT (ENSPCOG00000015742) Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 2504 ENSPSMG00000002787 #22 Greater bamboo lemur MODERN SPECIES 1438 ENSPSMG00000009753 #22 Laurasiatheria ANCESTRAL SPECIES 16 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Carnivora ANCESTRAL SPECIES 11 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT01000000221142 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Felidae ANCESTRAL SPECIES 12 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT01000000221142 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT01030000235848 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00990000213085 ENSGT00390000018687 Panthera ANCESTRAL SPECIES 41 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00510000046986.v.b.b.b ENSGT00540000073670 ENSGT01000000221142 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT01090000260070.A ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT01030000235848 Panthera_a ANCESTRAL SPECIES 40 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00510000046986.v.b.b.b ENSGT00540000073670 ENSGT01000000221142 ENSGT00950000182963.b.a #12 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00390000009320.cb ENSGT00940000158222.ib.b ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 leopard MODERN SPECIES 139 ENSPPRG00000010766 #15 ENSPPRG00000010762 #15 CDKL5 (ENSPPRG00000010754) #16 RS1 (ENSPPRG00000010703) #17 PPEF1 (ENSPPRG00000010688) #18 PHKA2 (ENSPPRG00000010549) #19 ADGRG2 (ENSPPRG00000010256) #20 ENSPPRG00000008810 PDHA1 (ENSPPRG00000008782) #22 MAP3K15 (ENSPPRG00000008639) #23 SH3KBP1 (ENSPPRG00000008569) #24 BCLAF3 (ENSPPRG00000008464) #25 MAP7D2 (ENSPPRG00000008395) #26 ENSPPRG00000008180 #27 RPS6KA3 (ENSPPRG00000008105) #28 ENSPPRG00000008049 lion MODERN SPECIES 88 RBBP7 (ENSPLOG00000015390) #10 REPS2 (ENSPLOG00000015573) #11 ENSPLOG00000015930 ENSPLOG00000015961 NHS (ENSPLOG00000016019) #12 RAI2 (ENSPLOG00000016300) #13 SCML2 (ENSPLOG00000016350) #15 CDKL5 (ENSPLOG00000016436) #16 ENSPLOG00000016465 RS1 (ENSPLOG00000016497) #17 PPEF1 (ENSPLOG00000016638) #18 PHKA2 (ENSPLOG00000016957) #19 ADGRG2 (ENSPLOG00000017564) #20 ENSPLOG00000019887 ENSPLOG00000019908 PDHA1 (ENSPLOG00000019955) #22 MAP3K15 (ENSPLOG00000020043) #23 SH3KBP1 (ENSPLOG00000020327) #24 BCLAF3 (ENSPLOG00000020503) #25 MAP7D2 (ENSPLOG00000020581) #26 EIF1AX (ENSPLOG00000020933) #27 RPS6KA3 (ENSPLOG00000021031) #28 CYBB (ENSPLOG00000021184) DYNLT3 (ENSPLOG00000021233) ENSPLOG00000021250 ENSPLOG00000021262 SYTL5 (ENSPLOG00000021282) ENSPLOG00000021386 OTC (ENSPLOG00000021548) TSPAN7 (ENSPLOG00000021583) MID1IP1 (ENSPLOG00000021611) Tiger MODERN SPECIES 323 ENSPTIG00000017604 #15 CDKL5 (ENSPTIG00000018564) #16 RS1 (ENSPTIG00000019847) #17 PPEF1 (ENSPTIG00000020149) #18 PHKA2 (ENSPTIG00000004654) #19 ADGRG2 (ENSPTIG00000007761) #20 PDHA1 (ENSPTIG00000019524) #22 MAP3K15 (ENSPTIG00000021189) #23 BCLAF3 (ENSPTIG00000006480) #25 MAP7D2 (ENSPTIG00000009089) #26 ENSPTIG00000012582 #27 RPS6KA3 (ENSPTIG00000013422) #28 ENSPTIG00000015099 Cat MODERN SPECIES 252 RBBP7 (ENSFCAG00000028919) #10 REPS2 (ENSFCAG00000006527) #11 ENSFCAG00000052354 NHS (ENSFCAG00000000186) #12 ENSFCAG00000043428 ENSFCAG00000047052 ENSFCAG00000053338 #14 SCML2 (ENSFCAG00000006438) #15 CDKL5 (ENSFCAG00000001075) #16 ENSFCAG00000026145 RS1 (ENSFCAG00000037717) #17 PPEF1 (ENSFCAG00000001528) #18 PHKA2 (ENSFCAG00000001529) #19 ADGRG2 (ENSFCAG00000018328) #20 ENSFCAG00000006395 PDHA1 (ENSFCAG00000012903) #22 MAP3K15 (ENSFCAG00000012906) #23 SH3KBP1 (ENSFCAG00000003908) #24 BCLAF3 (ENSFCAG00000003909) #25 MAP7D2 (ENSFCAG00000010791) #26 EIF1AX (ENSFCAG00000035249) #27 RPS6KA3 (ENSFCAG00000010795) #28 ENSFCAG00000053775 ENSFCAG00000049761 CNKSR2 (ENSFCAG00000026807) #29 SMPX (ENSFCAG00000037718) #31 MBTPS2 (ENSFCAG00000029861) #32 SMS (ENSFCAG00000002434) #33 PHEX (ENSFCAG00000023221) #34 ENSFCAG00000051651 ENSFCAG00000038497 Caniformia ANCESTRAL SPECIES 26 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT01000000221142 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.r.b #33 ENSGT00940000167584.b ENSGT00870000136506.s #33 ENSGT00940000157313 #34 ENSGT00940000164183 Canidae ANCESTRAL SPECIES 26 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT01000000221142 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT01090000260070.A ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.r.b #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Canis_lupus ANCESTRAL SPECIES 26 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT01000000221142 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT01090000260070.A ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.r.b #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Dog MODERN SPECIES 144 REPS2 (ENSCAFG00845030873) #11 ENSCAFG00845030938 NHS (ENSCAFG00845030967) #12 SCML1 (ENSCAFG00845030994) RAI2 (ENSCAFG00845030999) #13 ENSCAFG00845024469 #14 SCML2 (ENSCAFG00845024846) #15 ENSCAFG00845025153 CDKL5 (ENSCAFG00845025238) #16 ENSCAFG00845025606 RS1 (ENSCAFG00845025646) #17 PPEF1 (ENSCAFG00845025770) #18 PHKA2 (ENSCAFG00845026195) #19 ADGRG2 (ENSCAFG00845027443) #20 ENSCAFG00845028004 PDHA1 (ENSCAFG00845028035) #22 MAP3K15 (ENSCAFG00845028166) #23 SH3KBP1 (ENSCAFG00845028384) #24 BCLAF3 (ENSCAFG00845028801) #25 MAP7D2 (ENSCAFG00845028966) #26 EIF1AX (ENSCAFG00845029014) #27 RPS6KA3 (ENSCAFG00845029219) #28 CNKSR2 (ENSCAFG00845029599) #29 KLHL34 (ENSCAFG00845029813) #30 SMPX (ENSCAFG00845029832) #31 MBTPS2 (ENSCAFG00845029854) #32 ENSCAFG00845029922 #33 PHEX (ENSCAFG00845029993) #34 ENSCAFG00845030087 PTCHD1 (ENSCAFG00845030096) #37 PRDX4 (ENSCAFG00845030129) Dingo MODERN SPECIES 217 SYAP1 (ENSCAFG00020003729) #8 TXLNG (ENSCAFG00020003746) #9 RBBP7 (ENSCAFG00020003765) #10 REPS2 (ENSCAFG00020003791) #11 ENSCAFG00020003924 ENSCAFG00020003937 NHS (ENSCAFG00020003950) #12 RAI2 (ENSCAFG00020004001) #13 SCML2 (ENSCAFG00020004011) #15 CDKL5 (ENSCAFG00020004060) #16 ENSCAFG00020004181 RS1 (ENSCAFG00020004187) #17 PPEF1 (ENSCAFG00020004211) #18 PHKA2 (ENSCAFG00020004228) #19 ADGRG2 (ENSCAFG00020004286) #20 PDHA1 (ENSCAFG00020004526) #22 MAP3K15 (ENSCAFG00020004533) #23 SH3KBP1 (ENSCAFG00020004559) #24 ENSCAFG00020004575 #25 MAP7D2 (ENSCAFG00020004579) #26 EIF1AX (ENSCAFG00020004588) #27 RPS6KA3 (ENSCAFG00020004599) #28 ENSCAFG00020004620 CNKSR2 (ENSCAFG00020004670) #29 SMPX (ENSCAFG00020005104) #31 MBTPS2 (ENSCAFG00020005119) #32 ENSCAFG00020005174 #33 PHEX (ENSCAFG00020005217) #34 ENSCAFG00020005279 ENSCAFG00020005312 PTCHD1 (ENSCAFG00020005326) #37 Red fox MODERN SPECIES 24 RBBP7 (ENSVVUG00000014406) #10 ENSVVUG00000014403 ENSVVUG00000014401 REPS2 (ENSVVUG00000014319) #11 NHS (ENSVVUG00000014292) #12 RAI2 (ENSVVUG00000014289) #13 ENSVVUG00000014283 ENSVVUG00000014260 #14 SCML2 (ENSVVUG00000014250) #15 ENSVVUG00000014245 ENSVVUG00000014243 CDKL5 (ENSVVUG00000014210) #16 ENSVVUG00000014199 PPEF1 (ENSVVUG00000014157) #18 ADGRG2 (ENSVVUG00000013420) #20 PDHA1 (ENSVVUG00000013392) #22 MAP3K15 (ENSVVUG00000013244) #23 ENSVVUG00000013215 ENSVVUG00000013205 SH3KBP1 (ENSVVUG00000013144) #24 BCLAF3 (ENSVVUG00000013082) #25 MAP7D2 (ENSVVUG00000013035) #26 EIF1AX (ENSVVUG00000013024) #27 RPS6KA3 (ENSVVUG00000013013) #28 ENSVVUG00000012987 ENSVVUG00000012984 CNKSR2 (ENSVVUG00000012970) #29 ENSVVUG00000012959 #30 SMPX (ENSVVUG00000012956) #31 MBTPS2 (ENSVVUG00000012954) #32 ENSVVUG00000012939 #33 Caniformia_b ANCESTRAL SPECIES 24 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.r.b #33 ENSGT00940000167584.b ENSGT00870000136506.s #33 ENSGT00940000157313 #34 ENSGT00940000164183 Ursidae ANCESTRAL SPECIES 28 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181.f #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.r.b #33 ENSGT00940000167584.b ENSGT00870000136506.s #33 ENSGT00940000157313 #34 ENSGT00940000164183 Ursus ANCESTRAL SPECIES 47 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181.f #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.r.b #33 ENSGT00870000136506.s #33 ENSGT00940000157313 #34 ENSGT01070000253775.a.d.a.a.a.a.k ENSGT00950000186265 ENSGT00510000047522 American black bear MODERN SPECIES 1863 PDHA1 (ENSUAMG00000024022) #22 MAP3K15 (ENSUAMG00000024021) #23 Polar bear MODERN SPECIES 199 CTPS2 (ENSUMAG00000008722) #7 S100G (ENSUMAG00000008728) ENSUMAG00000008732 SYAP1 (ENSUMAG00000008735) #8 TXLNG (ENSUMAG00000008747) #9 RBBP7 (ENSUMAG00000008756) #10 REPS2 (ENSUMAG00000008763) #11 NHS (ENSUMAG00000008784) #12 ENSUMAG00000008787 SCML2 (ENSUMAG00000008801) #15 CDKL5 (ENSUMAG00000008854) #16 RS1 (ENSUMAG00000008917) #17 PPEF1 (ENSUMAG00000008931) #18 PHKA2 (ENSUMAG00000009067) #19 ADGRG2 (ENSUMAG00000010103) #20 PDHA1 (ENSUMAG00000010424) #22 MAP3K15 (ENSUMAG00000010492) #23 SH3KBP1 (ENSUMAG00000010682) #24 BCLAF3 (ENSUMAG00000010697) #25 MAP7D2 (ENSUMAG00000010703) #26 ENSUMAG00000010717 #27 RPS6KA3 (ENSUMAG00000010772) #28 CNKSR2 (ENSUMAG00000010845) #29 SMPX (ENSUMAG00000011168) #31 MBTPS2 (ENSUMAG00000011194) #32 ENSUMAG00000011222 SMS (ENSUMAG00000011225) #33 PHEX (ENSUMAG00000011248) #34 ENSUMAG00000011412 ENSUMAG00000011422 ENSUMAG00000011448 Giant Panda MODERN SPECIES 2288 ENSAMEG00000023806 SYAP1 (ENSAMEG00000010286) #8 TXLNG (ENSAMEG00000010264) #9 RBBP7 (ENSAMEG00000010201) #10 REPS2 (ENSAMEG00000010165) #11 NHS (ENSAMEG00000010138) #12 ENSAMEG00000002958 RAI2 (ENSAMEG00000018565) #13 ENSAMEG00000029358 SCML2 (ENSAMEG00000016850) #15 CDKL5 (ENSAMEG00000016835) #16 RS1 (ENSAMEG00000016826) #17 PPEF1 (ENSAMEG00000016806) #18 PHKA2 (ENSAMEG00000016774) #19 ADGRG2 (ENSAMEG00000016754) #20 PDHA1 (ENSAMEG00000016730) #22 MAP3K15 (ENSAMEG00000016682) #23 SH3KBP1 (ENSAMEG00000016636) #24 BCLAF3 (ENSAMEG00000016629) #25 MAP7D2 (ENSAMEG00000016615) #26 ENSAMEG00000028944 #27 RPS6KA3 (ENSAMEG00000016514) #28 CNKSR2 (ENSAMEG00000016482) #29 KLHL34 (ENSAMEG00000016476) #30 SMPX (ENSAMEG00000016467) #31 ENSAMEG00000016444 SMS (ENSAMEG00000016423) #33 PHEX (ENSAMEG00000016398) #34 ENSAMEG00000011652 ENSAMEG00000019953 PTCHD1 (ENSAMEG00000014696) #37 Mustelinae ANCESTRAL SPECIES 56 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506.s #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Ferret MODERN SPECIES 229 TXLNG (ENSMPUG00000002808) #9 RBBP7 (ENSMPUG00000002818) #10 REPS2 (ENSMPUG00000002827) #11 NHS (ENSMPUG00000002834) #12 ENSMPUG00000002840 RAI2 (ENSMPUG00000019017) #13 ENSMPUG00000002856 #14 SCML2 (ENSMPUG00000002862) #15 ENSMPUG00000002872 ENSMPUG00000002898 CDKL5 (ENSMPUG00000002901) #16 RS1 (ENSMPUG00000002912) #17 PPEF1 (ENSMPUG00000002945) #18 PHKA2 (ENSMPUG00000002957) #19 ADGRG2 (ENSMPUG00000003173) #20 PDHA1 (ENSMPUG00000003269) #22 ENSMPUG00000003281 #23 ENSMPUG00000003295 #23 SH3KBP1 (ENSMPUG00000003301) #24 BCLAF3 (ENSMPUG00000003312) #25 MAP7D2 (ENSMPUG00000003325) #26 EIF1AX (ENSMPUG00000003337) #27 RPS6KA3 (ENSMPUG00000003384) #28 ENSMPUG00000003816 American mink DUPLICATION American mink MODERN SPECIES 42 TXLNG (ENSNVIG00000020678) #9 RBBP7 (ENSNVIG00000020723) #10 REPS2 (ENSNVIG00000020761) #11 NHS (ENSNVIG00000020801) #12 ENSNVIG00000020825 ENSNVIG00000020836 ENSNVIG00000020854 SCML2 (ENSNVIG00000020875) #15 CDKL5 (ENSNVIG00000020913) #16 ENSNVIG00000020953 RS1 (ENSNVIG00000000088) #17 PPEF1 (ENSNVIG00000000126) #18 PHKA2 (ENSNVIG00000000195) #19 ADGRG2 (ENSNVIG00000000398) #20 ENSNVIG00000001555 #22 ENSNVIG00000001566 #22 MAP3K15 (ENSNVIG00000001576) #23 SH3KBP1 (ENSNVIG00000001649) #24 BCLAF3 (ENSNVIG00000001781) #25 ENSNVIG00000001808 #26 American mink MODERN SPECIES 42 SYAP1 (ENSNVIG00000020662) #8 TXLNG (ENSNVIG00000020678) #9 RBBP7 (ENSNVIG00000020723) #10 REPS2 (ENSNVIG00000020761) #11 NHS (ENSNVIG00000020801) #12 ENSNVIG00000020825 ENSNVIG00000020836 ENSNVIG00000020854 SCML2 (ENSNVIG00000020875) #15 CDKL5 (ENSNVIG00000020913) #16 ENSNVIG00000020953 RS1 (ENSNVIG00000000088) #17 PPEF1 (ENSNVIG00000000126) #18 PHKA2 (ENSNVIG00000000195) #19 ADGRG2 (ENSNVIG00000000398) #20 ENSNVIG00000001555 #22 ENSNVIG00000001566 #22 MAP3K15 (ENSNVIG00000001576) #23 SH3KBP1 (ENSNVIG00000001649) #24 BCLAF3 (ENSNVIG00000001781) #25 ENSNVIG00000001808 #26 Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00910000144179.b.a #7 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Chiroptera ANCESTRAL SPECIES 25 ENSGT00530000064238 ENSGT00910000144179.b.a #7 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Microchiroptera ANCESTRAL SPECIES 25 ENSGT00910000144179.b.a #7 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00540000073670 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Microbat MODERN SPECIES 986 RBBP7 (ENSMLUG00000006194) #10 ENSMLUG00000028073 REPS2 (ENSMLUG00000008125) #11 NHS (ENSMLUG00000015408) #12 ENSMLUG00000029397 RAI2 (ENSMLUG00000015416) #13 SCML2 (ENSMLUG00000015450) #15 CDKL5 (ENSMLUG00000006808) #16 RS1 (ENSMLUG00000006836) #17 PPEF1 (ENSMLUG00000005487) #18 PHKA2 (ENSMLUG00000015264) #19 SCARB1 (ENSMLUG00000002680) ADGRG2 (ENSMLUG00000005218) #20 ENSMLUG00000030082 ENSMLUG00000011884 PDHA1 (ENSMLUG00000012932) #22 MAP3K15 (ENSMLUG00000012936) #23 ENSMLUG00000025007 SH3KBP1 (ENSMLUG00000012949) #24 BCLAF3 (ENSMLUG00000012956) #25 MAP7D2 (ENSMLUG00000012967) #26 ENSMLUG00000012977 #27 RPS6KA3 (ENSMLUG00000012980) #28 Greater horseshoe bat MODERN SPECIES RBBP7 (ENSRFEG00010011331) #10 ENSRFEG00010011296 ENSRFEG00010011230 REPS2 (ENSRFEG00010010751) #11 ENSRFEG00010010721 NHS (ENSRFEG00010010332) #12 ENSRFEG00010010269 RAI2 (ENSRFEG00010010245) #13 ENSRFEG00010010207 SCML2 (ENSRFEG00010010166) #15 CDKL5 (ENSRFEG00010010106) #16 RS1 (ENSRFEG00010010035) #17 PPEF1 (ENSRFEG00010009902) #18 PHKA2 (ENSRFEG00010009773) #19 ADGRG2 (ENSRFEG00010009414) #20 PDHA1 (ENSRFEG00010009265) #22 MAP3K15 (ENSRFEG00010009034) #23 SH3KBP1 (ENSRFEG00010008770) #24 BCLAF3 (ENSRFEG00010008652) #25 MAP7D2 (ENSRFEG00010008522) #26 EIF1AX (ENSRFEG00010008355) #27 RPS6KA3 (ENSRFEG00010008249) #28 ENSRFEG00010008206 CNKSR2 (ENSRFEG00010007889) #29 KLHL34 (ENSRFEG00010007846) #30 SMPX (ENSRFEG00010007815) #31 ENSRFEG00010007751 MBTPS2 (ENSRFEG00010007702) #32 ENSRFEG00010007656 #33 PHEX (ENSRFEG00010007442) #34 ENSRFEG00010007428 Megabat MODERN SPECIES 539 PDHA1 (ENSPVAG00000005420) #22 MAP3K15 (ENSPVAG00000005426) #23 SH3KBP1 (ENSPVAG00000005430) #24 Equus ANCESTRAL SPECIES 48 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT01090000261388 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00940000167584.b ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 Horse MODERN SPECIES 480 ENSECAG00000013855 TXLNG (ENSECAG00000014123) #9 RBBP7 (ENSECAG00000019979) #10 REPS2 (ENSECAG00000009429) #11 NHS (ENSECAG00000020766) #12 ENSECAG00000017851 ENSECAG00000030878 RAI2 (ENSECAG00000006060) #13 ENSECAG00000033783 #14 SCML2 (ENSECAG00000022025) #15 CDKL5 (ENSECAG00000007008) #16 RS1 (ENSECAG00000012117) #17 PPEF1 (ENSECAG00000013892) #18 PHKA2 (ENSECAG00000004868) #19 ADGRG2 (ENSECAG00000023252) #20 PDHA1 (ENSECAG00000001964) #22 MAP3K15 (ENSECAG00000022251) #23 SH3KBP1 (ENSECAG00000017758) #24 BCLAF3 (ENSECAG00000024666) MAP7D2 (ENSECAG00000000072) #26 EIF1AX (ENSECAG00000006469) #27 RPS6KA3 (ENSECAG00000011322) #28 ENSECAG00000047809 ENSECAG00000049869 CNKSR2 (ENSECAG00000000149) #29 ENSECAG00000044474 KLHL34 (ENSECAG00000018669) #30 SMPX (ENSECAG00000058470) #31 MBTPS2 (ENSECAG00000000437) SMS (ENSECAG00000017447) #33 PHEX (ENSECAG00000011455) #34 Donkey MODERN SPECIES 36 ENSEASG00005007934 ENSEASG00005024714 ENSEASG00005024352 ENSEASG00005038774 ENSEASG00005036870 ENSEASG00005032700 ENSEASG00005000797 ENSEASG00005000808 #13 ENSEASG00005027646 #14 SCML2 (ENSEASG00005022494) #15 CDKL5 (ENSEASG00005022515) #16 RS1 (ENSEASG00005022504) #17 PPEF1 (ENSEASG00005022499) #18 ENSEASG00005025600 #19 ADGRG2 (ENSEASG00005014281) #20 PDHA1 (ENSEASG00005014303) #22 MAP3K15 (ENSEASG00005014304) #23 SH3KBP1 (ENSEASG00005014314) #24 ENSEASG00005035168 ENSEASG00005034136 ENSEASG00005014696 #25 MAP7D2 (ENSEASG00005014697) #26 EIF1AX (ENSEASG00005009834) #27 RPS6KA3 (ENSEASG00005014705) #28 CNKSR2 (ENSEASG00005007178) #29 KLHL34 (ENSEASG00005037044) #30 SMPX (ENSEASG00005007668) #31 ENSEASG00005020041 SMS (ENSEASG00005020046) #33 PHEX (ENSEASG00005023744) #34 ENSEASG00005037356 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Suina ANCESTRAL SPECIES 41 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00950000185291 Chacoan peccary MODERN SPECIES 109 S100G (ENSCWAG00000014113) CTPS2 (ENSCWAG00000013931) #7 SYAP1 (ENSCWAG00000013836) #8 TXLNG (ENSCWAG00000013662) #9 RBBP7 (ENSCWAG00000013432) #10 REPS2 (ENSCWAG00000013113) #11 NHS (ENSCWAG00000012785) #12 RAI2 (ENSCWAG00000012729) #13 SCML2 (ENSCWAG00000012506) #15 CDKL5 (ENSCWAG00000012250) #16 RS1 (ENSCWAG00000012171) #17 PPEF1 (ENSCWAG00000012062) #18 PHKA2 (ENSCWAG00000011981) #19 ADGRG2 (ENSCWAG00000004734) #20 ENSCWAG00000004397 PDHA1 (ENSCWAG00000004308) #22 MAP3K15 (ENSCWAG00000004160) #23 SH3KBP1 (ENSCWAG00000004005) #24 BCLAF3 (ENSCWAG00000003903) #25 MAP7D2 (ENSCWAG00000003689) #26 EIF1AX (ENSCWAG00000003625) #27 RPS6KA3 (ENSCWAG00000003548) #28 Pig MODERN SPECIES 300 RBBP7 (ENSSSCG00000012149) #10 REPS2 (ENSSSCG00000012150) #11 NHS (ENSSSCG00000012151) #12 ENSSSCG00000012152 RAI2 (ENSSSCG00000012153) #13 ENSSSCG00000060254 ENSSSCG00000050671 ENSSSCG00000041054 #14 SCML2 (ENSSSCG00000012155) #15 CDKL5 (ENSSSCG00000012156) #16 RS1 (ENSSSCG00000026932) #17 PPEF1 (ENSSSCG00000030274) #18 PHKA2 (ENSSSCG00000012157) #19 ADGRG2 (ENSSSCG00000029756) #20 ENSSSCG00000040104 PDHA1 (ENSSSCG00000023643) #22 MAP3K15 (ENSSSCG00000020735) #23 SH3KBP1 (ENSSSCG00000012160) #24 BCLAF3 (ENSSSCG00000023334) #25 MAP7D2 (ENSSSCG00000012161) #26 EIF1AX (ENSSSCG00000032223) #27 RPS6KA3 (ENSSSCG00000012163) #28 ENSSSCG00000060065 CNKSR2 (ENSSSCG00000012164) #29 KLHL34 (ENSSSCG00000033979) #30 SMPX (ENSSSCG00000032720) #31 ENSSSCG00000012165 SMS (ENSSSCG00000012166) #33 PHEX (ENSSSCG00000012167) #34 ENSSSCG00000012169 PTCHD1 (ENSSSCG00000032433) #37 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Camelidae ANCESTRAL SPECIES 59 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000164589 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00510000047522 ENSGT00940000164183 ENSGT00940000157080 #37 Alpaca MODERN SPECIES 377 PDHA1 (ENSVPAG00000009480) #22 ENSVPAG00000009481 #23 SH3KBP1 (ENSVPAG00000009482) #24 Arabian camel MODERN SPECIES 204 S100G (ENSCDRG00005013884) SYAP1 (ENSCDRG00005013928) #8 ENSCDRG00005014067 #9 RBBP7 (ENSCDRG00005014158) #10 REPS2 (ENSCDRG00005014399) #11 NHS (ENSCDRG00005014939) #12 SCML1 (ENSCDRG00005015136) RAI2 (ENSCDRG00005015229) #13 SCML2 (ENSCDRG00005015356) #15 CDKL5 (ENSCDRG00005015479) #16 ENSCDRG00005015576 RS1 (ENSCDRG00005015612) #17 PPEF1 (ENSCDRG00005015683) #18 PHKA2 (ENSCDRG00005015770) #19 ADGRG2 (ENSCDRG00005016282) #20 PDHA1 (ENSCDRG00005021482) #22 SH3KBP1 (ENSCDRG00005021507) #24 BCLAF3 (ENSCDRG00005021538) #25 MAP7D2 (ENSCDRG00005021545) #26 EIF1AX (ENSCDRG00005021559) #27 RPS6KA3 (ENSCDRG00005021577) #28 CNKSR2 (ENSCDRG00005021599) #29 KLHL34 (ENSCDRG00005021612) #30 SMPX (ENSCDRG00005021613) #31 ENSCDRG00005021614 MBTPS2 (ENSCDRG00005021615) #32 SMS (ENSCDRG00005021617) #33 PHEX (ENSCDRG00005021620) #34 ENSCDRG00005021631 PTCHD1 (ENSCDRG00005021635) #37 ENSCDRG00005021636 Artiodactyla_b ANCESTRAL SPECIES 24 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Cetacea ANCESTRAL SPECIES 21 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT01010000222890.b ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009724.l.y.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000157080 #37 Odontoceti ANCESTRAL SPECIES 22 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT01010000222890.b ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Odontoceti_a ANCESTRAL SPECIES 20 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407.m #15 ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT01010000222890.b ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Odontoceti_b ANCESTRAL SPECIES 22 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407.m #15 ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT01010000222890.b ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00940000172088 ENSGT00940000157313 #34 ENSGT00940000164207 Monodontidae ANCESTRAL SPECIES 30 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00540000073670 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00950000183210.d.a.c.a.a.a ENSGT00940000159407.m #15 ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00940000160729.b ENSGT01010000222890.b ENSGT00390000002034.j ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00940000172088 Narwhal MODERN SPECIES 309 RBBP7 (ENSMMNG00015020317) #10 REPS2 (ENSMMNG00015010789) #11 ENSMMNG00015010820 NHS (ENSMMNG00015010825) #12 ENSMMNG00015010836 RAI2 (ENSMMNG00015010851) #13 ENSMMNG00015010865 ENSMMNG00015010874 ENSMMNG00015010891 #15 ENSMMNG00015010922 CDKL5 (ENSMMNG00015010933) #16 RS1 (ENSMMNG00015010947) #17 PPEF1 (ENSMMNG00015010972) #18 PHKA2 (ENSMMNG00015011017) #19 ADGRG2 (ENSMMNG00015011189) #20 PDHA1 (ENSMMNG00015011306) #22 SH3KBP1 (ENSMMNG00015011427) #24 ENSMMNG00015011582 ENSMMNG00015011595 ENSMMNG00015011610 ENSMMNG00015011630 BCLAF3 (ENSMMNG00015011642) #25 MAP7D2 (ENSMMNG00015011661) #26 ENSMMNG00015011692 #27 RPS6KA3 (ENSMMNG00015011742) #28 ENSMMNG00015011921 ENSMMNG00015011934 CNKSR2 (ENSMMNG00015012238) #29 KLHL34 (ENSMMNG00015012985) #30 SMPX (ENSMMNG00015012992) #31 ENSMMNG00015012997 Beluga whale MODERN SPECIES 41 REPS2 (ENSDLEG00000020540) #11 ENSDLEG00000020552 ENSDLEG00000020554 NHS (ENSDLEG00000020557) #12 SCML1 (ENSDLEG00000020562) RAI2 (ENSDLEG00000020567) #13 ENSDLEG00000020569 ENSDLEG00000020574 #15 ENSDLEG00000020579 ENSDLEG00000020586 CDKL5 (ENSDLEG00000020591) #16 RS1 (ENSDLEG00000020598) #17 PPEF1 (ENSDLEG00000020612) #18 PHKA2 (ENSDLEG00000020633) #19 ADGRG2 (ENSDLEG00000020709) #20 PDHA1 (ENSDLEG00000020859) #22 MAP3K15 (ENSDLEG00000020876) #23 SH3KBP1 (ENSDLEG00000020919) #24 ENSDLEG00000020966 ENSDLEG00000020970 ENSDLEG00000020972 BCLAF3 (ENSDLEG00000020974) #25 MAP7D2 (ENSDLEG00000020985) #26 EIF1AX (ENSDLEG00000021017) #27 RPS6KA3 (ENSDLEG00000021020) #28 ENSDLEG00000021027 ENSDLEG00000021028 CNKSR2 (ENSDLEG00000021034) #29 SMPX (ENSDLEG00000021052) #31 ENSDLEG00000021055 MBTPS2 (ENSDLEG00000021061) #32 Vaquita MODERN SPECIES 34 RBBP7 (ENSPSNG00000019143) #10 REPS2 (ENSPSNG00000019316) #11 ENSPSNG00000019537 ENSPSNG00000019571 NHS (ENSPSNG00000019626) #12 ENSPSNG00000019850 RAI2 (ENSPSNG00000019870) #13 ENSPSNG00000019901 #15 ENSPSNG00000019959 CDKL5 (ENSPSNG00000020000) #16 ENSPSNG00000020052 RS1 (ENSPSNG00000020065) #17 PPEF1 (ENSPSNG00000020159) #18 PHKA2 (ENSPSNG00000020358) #19 ADGRG2 (ENSPSNG00000020539) #20 PDHA1 (ENSPSNG00000020773) #22 SH3KBP1 (ENSPSNG00000021240) #24 ENSPSNG00000021512 BCLAF3 (ENSPSNG00000021539) #25 MAP7D2 (ENSPSNG00000021591) #26 EIF1AX (ENSPSNG00000021671) #27 RPS6KA3 (ENSPSNG00000021768) #28 ENSPSNG00000021849 ENSPSNG00000021866 CNKSR2 (ENSPSNG00000022151) #29 KLHL34 (ENSPSNG00000022394) #30 SMPX (ENSPSNG00000022398) #31 ENSPSNG00000022401 ENSPSNG00000022411 ENSPSNG00000022423 #33 PHEX (ENSPSNG00000022431) #34 Dolphin MODERN SPECIES 314 PDHA1 (ENSTTRG00000000660) #22 MAP3K15 (ENSTTRG00000000661) #23 Sperm whale MODERN SPECIES 13 ENSPCTG00005005153 RBBP7 (ENSPCTG00005005178) #10 REPS2 (ENSPCTG00005005319) #11 ENSPCTG00005005421 NHS (ENSPCTG00005005450) #12 SCML1 (ENSPCTG00005005559) ENSPCTG00005005600 #13 ENSPCTG00005005614 #13 SCML2 (ENSPCTG00005005727) #15 ENSPCTG00005005791 CDKL5 (ENSPCTG00005005814) #16 RS1 (ENSPCTG00005005843) #17 PPEF1 (ENSPCTG00005005905) #18 PHKA2 (ENSPCTG00005006139) #19 ADGRG2 (ENSPCTG00005006920) #20 PDHA1 (ENSPCTG00005011695) #22 SH3KBP1 (ENSPCTG00005011856) #24 BCLAF3 (ENSPCTG00005012120) #25 MAP7D2 (ENSPCTG00005012303) #26 EIF1AX (ENSPCTG00005012927) #27 RPS6KA3 (ENSPCTG00005013127) #28 ENSPCTG00005013565 ENSPCTG00005013591 CNKSR2 (ENSPCTG00005013662) #29 KLHL34 (ENSPCTG00005014125) #30 SMPX (ENSPCTG00005014144) #31 ENSPCTG00005014208 SMS (ENSPCTG00005014394) #33 PHEX (ENSPCTG00005014479) #34 ENSPCTG00005014734 ENSPCTG00005014773 Blue whale MODERN SPECIES 40 ENSBMSG00010021135 ENSBMSG00010021146 RAI2 (ENSBMSG00010021187) #13 ENSBMSG00010013811 #15 ENSBMSG00010013823 #15 ENSBMSG00010013867 #15 ENSBMSG00010013905 CDKL5 (ENSBMSG00010013954) #16 ENSBMSG00010013988 ENSBMSG00010013995 RS1 (ENSBMSG00010014012) #17 PPEF1 (ENSBMSG00010014080) #18 PHKA2 (ENSBMSG00010014126) #19 ADGRG2 (ENSBMSG00010014260) #20 ENSBMSG00010014456 PDHA1 (ENSBMSG00010014498) #22 MAP3K15 (ENSBMSG00010014594) #23 SH3KBP1 (ENSBMSG00010014785) #24 ENSBMSG00010014991 BCLAF3 (ENSBMSG00010015038) #25 MAP7D2 (ENSBMSG00010015124) #26 ENSBMSG00010015217 #27 RPS6KA3 (ENSBMSG00010015348) #28 ENSBMSG00010015592 ENSBMSG00010015603 ENSBMSG00010015623 CNKSR2 (ENSBMSG00010015971) #29 KLHL34 (ENSBMSG00010021180) #30 SMPX (ENSBMSG00010021188) #31 ENSBMSG00010021193 ENSBMSG00010021206 #33 Pecora ANCESTRAL SPECIES 34 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 Percora_a ANCESTRAL SPECIES 22 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00940000160347.a ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 Siberian musk deer MODERN SPECIES 39 ENSMMSG00000016545 REPS2 (ENSMMSG00000016088) #11 ENSMMSG00000016017 NHS (ENSMMSG00000015809) #12 ENSMMSG00000015771 RAI2 (ENSMMSG00000015760) #13 ENSMMSG00000015753 ENSMMSG00000015735 SCML2 (ENSMMSG00000015652) #15 CDKL5 (ENSMMSG00000015599) #16 RS1 (ENSMMSG00000015564) #17 PPEF1 (ENSMMSG00000015507) #18 PHKA2 (ENSMMSG00000015473) #19 ADGRG2 (ENSMMSG00000015124) #20 ENSMMSG00000015071 PDHA1 (ENSMMSG00000015042) #22 ENSMMSG00000015019 ENSMMSG00000015007 MAP3K15 (ENSMMSG00000014913) #23 ENSMMSG00000014890 ENSMMSG00000014880 SH3KBP1 (ENSMMSG00000014761) #24 BCLAF3 (ENSMMSG00000014667) #25 MAP7D2 (ENSMMSG00000014040) #26 ENSMMSG00000013961 #27 RPS6KA3 (ENSMMSG00000013842) #28 ENSMMSG00000013809 ENSMMSG00000013799 CNKSR2 (ENSMMSG00000006728) #29 KLHL34 (ENSMMSG00000006431) #30 SMPX (ENSMMSG00000006404) #31 Bovidae ANCESTRAL SPECIES 23 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00940000160347.a ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 Caprinae DUPLICATION Caprinae DUPLICATION Caprinae ANCESTRAL SPECIES ENSGT00530000063174.a.i.u.a #22 Goat MODERN SPECIES ENSCHIG00000021084 MECOM (ENSCHIG00000015174) ENSCHIG00000001263 GOLIM4 (ENSCHIG00000024949) ENSCHIG00000014733 ENSCHIG00000000612 ENSCHIG00000021309 WDR49 (ENSCHIG00000013106) SERPINI2 (ENSCHIG00000018550) ZBBX (ENSCHIG00000025980) BCHE (ENSCHIG00000026772) SLITRK3 (ENSCHIG00000006438) ENSCHIG00000016725 SI (ENSCHIG00000010240) ENSCHIG00000011051 ENSCHIG00000023820 #22 OTOL1 (ENSCHIG00000012937) SPTSSB (ENSCHIG00000009108) NMD3 (ENSCHIG00000016015) ENSCHIG00000026689 ENSCHIG00000020415 ENSCHIG00000014679 PPM1L (ENSCHIG00000003416) ENSCHIG00000022304 ARL14 (ENSCHIG00000006468) KPNA4 (ENSCHIG00000027240) TRIM59 (ENSCHIG00000013800) SMC4 (ENSCHIG00000018909) IFT80 (ENSCHIG00000024872) C3orf80 (ENSCHIG00000010005) ENSCHIG00000021362 Rambouillet Sheep MODERN SPECIES LRRC34 (ENSOARG00020001962) MYNN (ENSOARG00020002108) ACTRT3 (ENSOARG00020002123) MECOM (ENSOARG00020002184) ENSOARG00020002458 ENSOARG00020002481 GOLIM4 (ENSOARG00020002523) SERPINI1 (ENSOARG00020002561) PDCD10 (ENSOARG00020002590) SERPINI2 (ENSOARG00020002638) BCHE (ENSOARG00020002687) SLITRK3 (ENSOARG00020002710) SI (ENSOARG00020002809) ENSOARG00020004705 ENSOARG00020004716 ENSOARG00020004733 #22 NMD3 (ENSOARG00020004805) SPTSSB (ENSOARG00020004978) ENSOARG00020004989 ENSOARG00020005007 ENSOARG00020005029 PPM1L (ENSOARG00020005069) ENSOARG00020005147 ARL14 (ENSOARG00020005166) KPNA4 (ENSOARG00020005180) ENSOARG00020005281 SMC4 (ENSOARG00020005306) IFT80 (ENSOARG00020005544) ENSOARG00020005593 C3orf80 (ENSOARG00020005601) IL12A (ENSOARG00020005615) Caprinae ANCESTRAL SPECIES 46 ENSGT00910000144179.b.a #7 ENSGT00530000064238 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a.r #19 ENSGT00940000156341 #20 ENSGT00940000160347.a ENSGT00530000063174.a.i.u.b #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 Rambouillet Sheep MODERN SPECIES 205 ENSOARG00020009586 CTPS2 (ENSOARG00020009621) #7 S100G (ENSOARG00020009888) SYAP1 (ENSOARG00020009929) #8 TXLNG (ENSOARG00020010154) #9 RBBP7 (ENSOARG00020010350) #10 REPS2 (ENSOARG00020010562) #11 NHS (ENSOARG00020011266) #12 RAI2 (ENSOARG00020011877) #13 CDKL5 (ENSOARG00020012130) #16 RS1 (ENSOARG00020012237) #17 ENSOARG00020012454 PHKA2 (ENSOARG00020012486) #19 ADGRG2 (ENSOARG00020013283) #20 ENSOARG00020014052 PDHA1 (ENSOARG00020014126) #22 MAP3K15 (ENSOARG00020014315) #23 SH3KBP1 (ENSOARG00020014389) #24 ENSOARG00020014649 MAP7D2 (ENSOARG00020014919) #26 EIF1AX (ENSOARG00020015967) #27 RPS6KA3 (ENSOARG00020016195) #28 ENSOARG00020016638 ENSOARG00020016661 ENSOARG00020016684 ENSOARG00020016703 ENSOARG00020016721 ENSOARG00020016730 CNKSR2 (ENSOARG00020016850) #29 KLHL34 (ENSOARG00020022568) #30 SMPX (ENSOARG00020022580) #31 Goat MODERN SPECIES 130 ENSCHIG00000000162 #22 ENSCHIG00000000233 #23 Caprinae ANCESTRAL SPECIES ENSGT00530000063174.a.i.v #22 Goat MODERN SPECIES 43 TMEM185A (ENSCHIG00000004747) ENSCHIG00000000434 ENSCHIG00000019036 ENSCHIG00000018828 ENSCHIG00000026446 #22 ENSCHIG00000010772 ENSCHIG00000022330 ENSCHIG00000010608 Bovinae ANCESTRAL SPECIES 32 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00940000160347.a.c ENSGT00940000160347.a.d.a.b ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000167584 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00950000185346 Bos ANCESTRAL SPECIES 32 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00900000141068.e.a.e.a.a ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00940000160347.a.c ENSGT00940000160347.a.d.a.b ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.l ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000167584 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Bos_a ANCESTRAL SPECIES 63 ENSGT00940000160347.a.d.a.b ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.l ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00940000154451.l.b.b.a.a.b ENSGT00940000167584 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Domestic yak MODERN SPECIES 69 ENSBGRG00000014636 ENSBGRG00000014610 ENSBGRG00000014583 PDHA1 (ENSBGRG00000014128) #22 ENSBGRG00000013897 #23 ENSBGRG00000012957 #23 SH3KBP1 (ENSBGRG00000011750) #24 BCLAF3 (ENSBGRG00000011387) #25 MAP7D2 (ENSBGRG00000011015) #26 ENSBGRG00000010670 #27 RPS6KA3 (ENSBGRG00000010065) #28 ENSBGRG00000009948 ENSBGRG00000009908 CNKSR2 (ENSBGRG00000009403) #29 KLHL34 (ENSBGRG00000009352) #30 SMPX (ENSBGRG00000009309) #31 ENSBGRG00000009234 MBTPS2 (ENSBGRG00000009064) #32 ENSBGRG00000009009 Wild yak MODERN SPECIES 932 PDHA1 (ENSBMUG00000016808) #22 MAP3K15 (ENSBMUG00000016858) #23 SH3KBP1 (ENSBMUG00000016923) #24 BCLAF3 (ENSBMUG00000016986) #25 MAP7D2 (ENSBMUG00000017083) #26 EIF1AX (ENSBMUG00000017161) #27 RPS6KA3 (ENSBMUG00000017229) #28 ENSBMUG00000017267 ENSBMUG00000017276 ENSBMUG00000017283 ENSBMUG00000017291 CNKSR2 (ENSBMUG00000017867) #29 SMPX (ENSBMUG00000018671) #31 ENSBMUG00000018702 SMS (ENSBMUG00000018739) #33 PHEX (ENSBMUG00000018766) #34 Bos_b ANCESTRAL SPECIES 39 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00900000141068.e.a.e.a.a ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00940000160347.a.c ENSGT00940000160347.a.d.a.a.a ENSGT00940000160347.a.d.a.b ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00390000009113.a.a.l ENSGT00940000156832.p.b ENSGT00940000156709 #29 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00940000154451.l.b.b.a.a.b ENSGT00940000167584 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Cow MODERN SPECIES 177 REPS2 (ENSBTAG00000031261) #11 ENSBTAG00000031256 ENSBTAG00000053299 NHS (ENSBTAG00000039195) #12 SCML1 (ENSBTAG00000017649) RAI2 (ENSBTAG00000039049) #13 SCML2 (ENSBTAG00000009420) #15 CDKL5 (ENSBTAG00000007428) #16 RS1 (ENSBTAG00000031145) #17 PPEF1 (ENSBTAG00000009545) #18 PHKA2 (ENSBTAG00000015355) #19 ADGRG2 (ENSBTAG00000000576) #20 MGC134232 (ENSBTAG00000038660) ENSBTAG00000037550 ENSBTAG00000051616 PDHA1 (ENSBTAG00000019852) #22 MAP3K15 (ENSBTAG00000019855) #23 SH3KBP1 (ENSBTAG00000003727) #24 BCLAF3 (ENSBTAG00000021962) #25 MAP7D2 (ENSBTAG00000017628) #26 EIF1AX (ENSBTAG00000017633) #27 RPS6KA3 (ENSBTAG00000017639) #28 ENSBTAG00000047699 ENSBTAG00000050929 ENSBTAG00000013625 CNKSR2 (ENSBTAG00000044202) #29 SMPX (ENSBTAG00000015204) #31 MBTPS2 (ENSBTAG00000008183) SMS (ENSBTAG00000018382) #33 ENSBTAG00000052700 PHEX (ENSBTAG00000000419) #34 Hybrid Bos Indicus MODERN SPECIES 315 RBBP7 (ENSBIXG00005027966) #10 REPS2 (ENSBIXG00005027877) #11 NHS (ENSBIXG00005027684) #12 ENSBIXG00005027553 ENSBIXG00005027526 RAI2 (ENSBIXG00005027505) #13 SCML2 (ENSBIXG00005005620) #15 CDKL5 (ENSBIXG00005005323) #16 RS1 (ENSBIXG00005005321) #17 PPEF1 (ENSBIXG00005004677) #18 PHKA2 (ENSBIXG00005027106) #19 ADGRG2 (ENSBIXG00005026817) #20 ENSBIXG00005026541 ENSBIXG00005026535 ENSBIXG00005005571 ENSBIXG00005026498 #22 MAP3K15 (ENSBIXG00005004522) #23 SH3KBP1 (ENSBIXG00005026195) #24 ENSBIXG00005025849 BCLAF3 (ENSBIXG00005025827) #25 MAP7D2 (ENSBIXG00005025740) #26 EIF1AX (ENSBIXG00005025615) #27 RPS6KA3 (ENSBIXG00005025516) #28 ENSBIXG00005024937 ENSBIXG00005024903 ENSBIXG00005024880 ENSBIXG00005024836 CNKSR2 (ENSBIXG00005024732) #29 SMPX (ENSBIXG00005024419) #31 MBTPS2 (ENSBIXG00005024353) #32 ENSBIXG00005024303 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 1323 CAPN6 (ENSCHYG00000023258) DCX (ENSCHYG00000023321) SERTM2 (ENSCHYG00000023372) ENSCHYG00000023393 ENSCHYG00000023483 ENSCHYG00000023716 TRPC5OS (ENSCHYG00000023871) ENSCHYG00000023881 LHFPL1 (ENSCHYG00000023922) AMOT (ENSCHYG00000023944) HTR2C (ENSCHYG00000024246) IL13RA2 (ENSCHYG00000024287) LRCH2 (ENSCHYG00000008772) PLS3 (ENSCHYG00000008909) ENSCHYG00000009546 ENSCHYG00000009598 #22 AGTR2 (ENSCHYG00000009628) ENSCHYG00000009726 CT83 (ENSCHYG00000009841) ENSCHYG00000009897 ENSCHYG00000009929 ENSCHYG00000009954 KLHL13 (ENSCHYG00000010013) WDR44 (ENSCHYG00000010370) DOCK11 (ENSCHYG00000011126) IL13RA1 (ENSCHYG00000011896) ENSCHYG00000012039 LONRF3 (ENSCHYG00000012064) ENSCHYG00000012323 ENSCHYG00000012357 PGRMC1 (ENSCHYG00000012477) Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 1323 RAI2 (ENSCHYG00000018670) #13 ENSCHYG00000018619 ENSCHYG00000018572 NHS (ENSCHYG00000018180) #12 REPS2 (ENSCHYG00000017518) #11 SYAP1 (ENSCHYG00000017346) #8 ENSCHYG00000017066 #14 SCML2 (ENSCHYG00000016775) #15 CDKL5 (ENSCHYG00000016442) #16 RS1 (ENSCHYG00000016355) #17 PPEF1 (ENSCHYG00000016044) #18 ENSCHYG00000015917 ENSCHYG00000015895 PHKA2 (ENSCHYG00000014501) #19 ADGRG2 (ENSCHYG00000025589) #20 ENSCHYG00000025479 #22 ENSCHYG00000025460 MAP3K15 (ENSCHYG00000025350) #23 SH3KBP1 (ENSCHYG00000024812) #24 BCLAF3 (ENSCHYG00000024575) #25 MAP7D2 (ENSCHYG00000024324) #26 ENSCHYG00000024281 EIF1AX (ENSCHYG00000024205) #27 RPS6KA3 (ENSCHYG00000023911) #28 ENSCHYG00000023852 ENSCHYG00000023829 CNKSR2 (ENSCHYG00000023268) #29 KLHL34 (ENSCHYG00000023198) #30 SMPX (ENSCHYG00000023180) #31 MBTPS2 (ENSCHYG00000023135) #32 ENSCHYG00000023111 Yarkand deer MODERN SPECIES 61 ENSCHYG00000009014 ENSCHYG00000008975 #22 Yarkand deer MODERN SPECIES 1323 ENSCHYG00000016961 ZMAT1 (ENSCHYG00000017092) BEX5 (ENSCHYG00000017246) ENSCHYG00000017277 TMSB15A (ENSCHYG00000017406) GPRASP1 (ENSCHYG00000017514) ENSCHYG00000017568 ENSCHYG00000017589 ENSCHYG00000017775 SRPX2 (ENSCHYG00000017819) TSPAN6 (ENSCHYG00000017982) TNMD (ENSCHYG00000018219) ENSCHYG00000018281 PCDH19 (ENSCHYG00000018307) ENSCHYG00000018423 ENSCHYG00000018452 #22 ENSCHYG00000018486 ENSCHYG00000018504 ENSCHYG00000018566 DIAPH2 (ENSCHYG00000018624) ENSCHYG00000018943 ENSCHYG00000018986 ENSCHYG00000019061 ENSCHYG00000019101 ENSCHYG00000019126 FAM133A (ENSCHYG00000019252) ENSCHYG00000019346 ENSCHYG00000019408 ENSCHYG00000019618 ENSCHYG00000019678 ENSCHYG00000019710 Eulipotyphla ANCESTRAL SPECIES 540 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 Hedgehog MODERN SPECIES 2868 PDHA1 (ENSEEUG00000005485) #22 MAP3K15 (ENSEEUG00000005668) #23 SH3KBP1 (ENSEEUG00000005862) #24 Common shrew DUPLICATION Common shrew MODERN SPECIES 4344 ENSSARG00000008912 #22 MAP3K15 (ENSSARG00000008925) #23 Common shrew MODERN SPECIES 4300 ENSSARG00000008171 #22 Atlantogenata ANCESTRAL SPECIES 50 ENSGT00910000144179.b.a #7 ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Xenarthra ANCESTRAL SPECIES 165 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 Armadillo MODERN SPECIES 729 SCML2 (ENSDNOG00000002390) #15 CDKL5 (ENSDNOG00000002494) #16 ENSDNOG00000041458 RS1 (ENSDNOG00000002498) #17 PPEF1 (ENSDNOG00000031966) #18 PHKA2 (ENSDNOG00000012404) #19 ADGRG2 (ENSDNOG00000012455) #20 PDHA1 (ENSDNOG00000008462) #22 MAP3K15 (ENSDNOG00000007828) #23 SH3KBP1 (ENSDNOG00000016477) #24 BCLAF3 (ENSDNOG00000045492) #25 MAP7D2 (ENSDNOG00000017855) #26 EIF1AX (ENSDNOG00000045675) #27 RPS6KA3 (ENSDNOG00000003310) #28 ENSDNOG00000031647 CNKSR2 (ENSDNOG00000000614) #29 KLHL34 (ENSDNOG00000033922) #30 SMPX (ENSDNOG00000016757) #31 MBTPS2 (ENSDNOG00000033022) #32 SMS (ENSDNOG00000006712) #33 PHEX (ENSDNOG00000002993) #34 ENSDNOG00000041572 ENSDNOG00000032914 Sloth MODERN SPECIES 2471 ENSCHOG00000006341 #22 Afrotheria ANCESTRAL SPECIES 66 ENSGT01100000263512.b.b.a ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Afrotheria_a ANCESTRAL SPECIES 64 ENSGT01100000263512.b.b.a ENSGT00390000007662 #8 ENSGT00940000155463 #9 ENSGT00940000154748.C #10 ENSGT00940000158080 #11 ENSGT00950000182963.b.a #12 ENSGT00940000164165 ENSGT00940000154164.d #13 ENSGT00940000163807 #14 ENSGT00940000159407 #15 ENSGT00940000157355 #16 ENSGT00940000161181 #17 ENSGT00940000159830 #18 ENSGT00950000183118.A.c.a #19 ENSGT00940000156341 #20 ENSGT00530000063174.a.i #22 ENSGT00940000159562 #23 ENSGT00940000155886 #24 ENSGT00950000183163.b #25 ENSGT00950000182941.b.b #26 ENSGT00390000008256 #27 ENSGT00940000159370 #28 ENSGT00940000156709 #29 ENSGT00940000162424 #30 ENSGT00390000017542 #31 ENSGT00510000048066 #32 ENSGT00870000136506 #33 ENSGT00940000157313 #34 ENSGT00940000164183 ENSGT00940000157080 #37 ENSGT00940000153430.a.a Hyrax MODERN SPECIES 2266 PDHA1 (ENSPCAG00000004196) #22 ENSPCAG00000004266 #23 Elephant MODERN SPECIES 369 TXLNG (ENSLAFG00000013552) #9 RBBP7 (ENSLAFG00000013554) #10 REPS2 (ENSLAFG00000012599) #11 NHS (ENSLAFG00000017062) #12 ENSLAFG00000017074 RAI2 (ENSLAFG00000014793) #13 ENSLAFG00000011802 #14 ENSLAFG00000011808 ENSLAFG00000027704 #15 CDKL5 (ENSLAFG00000009417) #16 RS1 (ENSLAFG00000009423) #17 ENSLAFG00000009424 #18 PHKA2 (ENSLAFG00000009425) #19 ADGRG2 (ENSLAFG00000009428) #20 ENSLAFG00000026076 PDHA1 (ENSLAFG00000009426) #22 MAP3K15 (ENSLAFG00000009429) #23 SH3KBP1 (ENSLAFG00000009756) #24 BCLAF3 (ENSLAFG00000008518) #25 MAP7D2 (ENSLAFG00000023306) #26 EIF1AX (ENSLAFG00000007016) #27 RPS6KA3 (ENSLAFG00000007020) #28 CNKSR2 (ENSLAFG00000007401) #29 KLHL34 (ENSLAFG00000007404) #30 SMPX (ENSLAFG00000001873) #31 MBTPS2 (ENSLAFG00000017242) #32 SMS (ENSLAFG00000003543) #33 PHEX (ENSLAFG00000010566) #34 ENSLAFG00000010569 ENSLAFG00000011531 PTCHD1 (ENSLAFG00000022742) #37 Tenrec MODERN SPECIES 2784 PDHA1 (ENSETEG00000001392) #22