Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000158353 #7	ENSGT00940000155001.B	ENSGT00390000006450 #8	ENSGT00940000163239 #10	ENSGT00940000161241 #11	ENSGT00940000153680.b #12	ENSGT00390000016048.b #13	ENSGT00440000038181.eb.a.a.b #14	ENSGT00950000182944.A #15	ENSGT00940000162049 #16	ENSGT00940000163113 #17	ENSGT00390000013347.b.b #18	ENSGT01080000257336.a.c.a #19	ENSGT00940000163536 #20	ENSGT00950000182887.C.a.b #21	ENSGT00390000008610.a.b.a.b #22	ENSGT00940000161093 #23	ENSGT00910000148220 #24	ENSGT00940000159690 #25	ENSGT00940000156163.e #26	ENSGT00530000063947.C #27	ENSGT01030000234582.e.b #28	ENSGT01030000234582.f.a.b #29	ENSGT00390000012877 #30	ENSGT00940000158413 #31	ENSGT00530000063516.a.a.c.b.y.a #32	ENSGT00440000033232.d #33	ENSGT00910000147490 #34	ENSGT00390000009554 #35	ENSGT00940000162288 #36	ENSGT00940000162702
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00390000006450 #8	ENSGT00940000166824	ENSGT00390000018145.cb.a.a.b.a #9	ENSGT00940000163239 #10	ENSGT00940000161241 #11	ENSGT00940000153680.b #12	ENSGT00390000016048.b #13	ENSGT00440000038181.eb.a.a.b #14	ENSGT00950000182944.A #15	ENSGT00940000162049 #16	ENSGT00940000163113 #17	ENSGT00390000013347.b.b #18	ENSGT01080000257336.a.c.a #19	ENSGT00940000163536 #20	ENSGT00950000182887.C.a.b #21	ENSGT00390000008610.a.b.a.b #22	ENSGT00510000046985.h.b.a.b	ENSGT00390000006485.c	ENSGT00910000146972	ENSGT00390000008610.a.a ##22	ENSGT00940000161093 #23	ENSGT00910000148220 #24	ENSGT00940000159690 #25	ENSGT00940000156163.e #26	ENSGT00530000063947.C #27	ENSGT01030000234582.e.b #28	ENSGT01030000234582.f.a.b #29	ENSGT00390000012877 #30	ENSGT00940000158413 #31	ENSGT00530000063516.a.a.c.b.y.a.d #32	ENSGT00440000033232.d #33
Cercopithecinae_b	ANCESTRAL SPECIES	32	ENSGT00390000006450 #8	ENSGT00940000166824	ENSGT00390000018145.cb.a.a.b.a #9	ENSGT00940000163239 #10	ENSGT00940000161241 #11	ENSGT00940000153680.b #12	ENSGT00390000016048.b #13	ENSGT00440000038181.eb.a.a.b #14	ENSGT00950000182944.A #15	ENSGT00940000162049 #16	ENSGT00940000163113 #17	ENSGT00390000013347.b.b #18	ENSGT01080000257336.a.c.a #19	ENSGT00940000163536 #20	ENSGT00950000182887.C.a.b #21	ENSGT00390000008610.a.b.a.b #22	ENSGT00390000006485.c	ENSGT00910000146972	ENSGT00940000161093 #23	ENSGT00910000148220 #24	ENSGT00940000159690 #25	ENSGT00940000156163.e #26	ENSGT00530000063947.C #27	ENSGT01030000234582.e.b #28	ENSGT01030000234582.f.a.b #29	ENSGT00390000012877 #30	ENSGT00940000158413 #31	ENSGT00530000063516.a.a.c.b.y.a.d #32	ENSGT00440000033232.d #33	ENSGT00910000147490 #34	ENSGT00390000009554 #35
Cercopithecinae_d	ANCESTRAL SPECIES	27	ENSGT00940000155001.B	ENSGT00390000006450 #8	ENSGT00390000018145.cb.a.a.b.a #9	ENSGT00940000163239 #10	ENSGT00940000161241 #11	ENSGT00940000153680.b #12	ENSGT00390000016048.b #13	ENSGT00440000038181.eb.a.a.b #14	ENSGT00950000182944.A #15	ENSGT00940000162049 #16	ENSGT00940000163113 #17	ENSGT00390000013347.b.b #18	ENSGT01080000257336.a.c.a #19	ENSGT00940000163536 #20	ENSGT00950000182887.C.a.b #21	ENSGT00390000008610.a.b.a.b #22	ENSGT00390000006485.c	ENSGT00910000146972	ENSGT00940000161093 #23	ENSGT00910000148220 #24	ENSGT00940000159690 #25	ENSGT00940000156163.e #26	ENSGT00530000063947.C #27	ENSGT01030000234582.e.b #28	ENSGT01030000234582.f.a.b #29	ENSGT00390000012877 #30	ENSGT00940000158413 #31	ENSGT00530000063516.a.a.c.b.y.a.d #32	ENSGT00440000033232.d #33	ENSGT00910000147490 #34	ENSGT00390000009554 #35
Sooty mangabey	DUPLICATION
Sooty mangabey	MODERN SPECIES	545	PGM2L1 (ENSCATG00000029770) #7	LIPT2 (ENSCATG00000029187) #8	ENSCATG00000000611 #9	ENSCATG00000043513 #10	CHRDL2 (ENSCATG00000018972) #11	RNF169 (ENSCATG00000043238) #12	XRRA1 (ENSCATG00000039406) #13	ENSCATG00000039999 #14	NEU3 (ENSCATG00000029743) #15	ENSCATG00000019868 #16	OR2AT4 (ENSCATG00000009927) #17	ENSCATG00000029708 #18	SLCO2B1 (ENSCATG00000028037) #19	TPBGL (ENSCATG00000010167) #20	ARRB1 (ENSCATG00000039690) #21	RPS3 (ENSCATG00000035348) #22	KLHL35 (ENSCATG00000042763) #23	ENSCATG00000041303 #24	GDPD5 (ENSCATG00000030069) #25	SERPINH1 (ENSCATG00000043530) #26	MAP6 (ENSCATG00000044768) #27	MOGAT2 (ENSCATG00000038955) #28	DGAT2 (ENSCATG00000001407) #29	UVRAG (ENSCATG00000039451) #30	WNT11 (ENSCATG00000035881) #31	THAP12 (ENSCATG00000024587) #32	GVQW3 (ENSCATG00000035253) #33	ENSCATG00000006180 #34	EMSY (ENSCATG00000033145) #35	LRRC32 (ENSCATG00000039757) #36	TSKU (ENSCATG00000018628) #37
Sooty mangabey	MODERN SPECIES	629	ENSCATG00000000743	NTRK2 (ENSCATG00000040423)	AGTPBP1 (ENSCATG00000044576)	ENSCATG00000001301	NAA35 (ENSCATG00000042793)	ENSCATG00000033608	C9orf153 (ENSCATG00000042082)	ISCA1 (ENSCATG00000042807)	TUT7 (ENSCATG00000032888)	GAS1 (ENSCATG00000011030)	ENSCATG00000042393	DAPK1 (ENSCATG00000033936)	CTSL (ENSCATG00000044799)	ENSCATG00000010556	CDK20 (ENSCATG00000016899)	ENSCATG00000011713 ##22	ENSCATG00000016774	SPIN1 (ENSCATG00000030976)	NXNL2 (ENSCATG00000038968)	ENSCATG00000030800	ENSCATG00000022256	S1PR3 (ENSCATG00000005549)	SHC3 (ENSCATG00000043648)	CKS2 (ENSCATG00000036628)	SECISBP2 (ENSCATG00000008304)	SEMA4D (ENSCATG00000044690)	ENSCATG00000012439	GADD45G (ENSCATG00000041187)
Sooty mangabey	MODERN SPECIES	185		ENSCATG00000044948	NXPH1 (ENSCATG00000037000)	ICA1 (ENSCATG00000043201)	GLCCI1 (ENSCATG00000044892)	ENSCATG00000030314	UMAD1 (ENSCATG00000033366)	RPA3 (ENSCATG00000028204)	MIOS (ENSCATG00000011011)	ENSCATG00000001666	COL28A1 (ENSCATG00000031059)	C1GALT1 (ENSCATG00000030704)	ENSCATG00000043335	ASNS (ENSCATG00000038317)	TAC1 (ENSCATG00000034795)	ENSCATG00000043998 ##22	ENSCATG00000032188	DLX5 (ENSCATG00000044853)	DLX6 (ENSCATG00000036157)	ENSCATG00000041545	ENSCATG00000014825	ENSCATG00000037610	SLC25A13 (ENSCATG00000029550)	DYNC1I1 (ENSCATG00000037835)	PDK4 (ENSCATG00000031905)	ASB4 (ENSCATG00000029891)	PON2 (ENSCATG00000030239)	PON3 (ENSCATG00000033359)	ENSCATG00000039956	PON1 (ENSCATG00000034334)	PPP1R9A (ENSCATG00000039595)
Drill	DUPLICATION
Drill	MODERN SPECIES	500								ENSMLEG00000042000	C9orf153 (ENSMLEG00000013492)	ISCA1 (ENSMLEG00000038112)	TUT7 (ENSMLEG00000027049)	DAPK1 (ENSMLEG00000033258)	CTSL (ENSMLEG00000036785)	ENSMLEG00000035282	CDK20 (ENSMLEG00000035229)	ENSMLEG00000044314 #22	ENSMLEG00000000797	SPIN1 (ENSMLEG00000035080)	NXNL2 (ENSMLEG00000033545)	ENSMLEG00000010964	S1PR3 (ENSMLEG00000028481)	SHC3 (ENSMLEG00000004268)	CKS2 (ENSMLEG00000035685)	SECISBP2 (ENSMLEG00000028868)	SEMA4D (ENSMLEG00000037083)	ENSMLEG00000037750	GADD45G (ENSMLEG00000031770)
Drill	MODERN SPECIES	472						ICA1 (ENSMLEG00000044079)	GLCCI1 (ENSMLEG00000040012)	UMAD1 (ENSMLEG00000042525)	RPA3 (ENSMLEG00000036302)	MIOS (ENSMLEG00000037819)	COL28A1 (ENSMLEG00000015407)	C1GALT1 (ENSMLEG00000044453)	ENSMLEG00000032398	ASNS (ENSMLEG00000028862)	TAC1 (ENSMLEG00000040054)	ENSMLEG00000017301 #22	SDHAF3 (ENSMLEG00000037669)	DLX5 (ENSMLEG00000036746)	DLX6 (ENSMLEG00000025971)	ENSMLEG00000039568	ENSMLEG00000036598	ENSMLEG00000033727	SLC25A13 (ENSMLEG00000038932)	DYNC1I1 (ENSMLEG00000042478)	PDK4 (ENSMLEG00000037032)	ASB4 (ENSMLEG00000036931)	PON2 (ENSMLEG00000027200)	PON3 (ENSMLEG00000036159)	PON1 (ENSMLEG00000035189)	PPP1R9A (ENSMLEG00000043621)	PEG10 (ENSMLEG00000035418)
Drill	MODERN SPECIES	1404								ENSMLEG00000036513 ##13	ENSMLEG00000037619 #14	NEU3 (ENSMLEG00000036085) #15	ENSMLEG00000028250 #16	OR2AT4 (ENSMLEG00000028367) #17	SLCO2B1 (ENSMLEG00000040970) #19	ARRB1 (ENSMLEG00000038818) #21	ENSMLEG00000001141	RPS3 (ENSMLEG00000027047) #22	ENSMLEG00000029117 #23	GDPD5 (ENSMLEG00000038219) #25	SERPINH1 (ENSMLEG00000029842) #26	MAP6 (ENSMLEG00000003608) #27	MOGAT2 (ENSMLEG00000031977) #28	DGAT2 (ENSMLEG00000043052) #29	UVRAG (ENSMLEG00000043625) #30
Olive baboon	MODERN SPECIES	3	ENSPANG00000034020	ENSPANG00000040935	ENSPANG00000051353	ENSPANG00000014355 #10	ENSPANG00000045204 #8	ENSPANG00000050947	ENSPANG00000037679 ##13	ENSPANG00000049173	ENSPANG00000034355 #14	ENSPANG00000010014 #15	ENSPANG00000048808 #16	ENSPANG00000042782 #17	SLCO2B1 (ENSPANG00000005995) #19	TPBGL (ENSPANG00000050172) #20	ARRB1 (ENSPANG00000011945) #21	RPS3 (ENSPANG00000016549) #22	KLHL35 (ENSPANG00000033783) #23	ENSPANG00000042578 #24	GDPD5 (ENSPANG00000011141) #25	SERPINH1 (ENSPANG00000033081) #26	MAP6 (ENSPANG00000048934) #27	MOGAT2 (ENSPANG00000008371) #28	DGAT2 (ENSPANG00000005994) #29	UVRAG (ENSPANG00000012471) #30	WNT11 (ENSPANG00000014353) #31	ENSPANG00000003101 #32	ENSPANG00000007883 #33	EMSY (ENSPANG00000007638) #35	LRRC32 (ENSPANG00000015382) #36	ENSPANG00000049669	TSKU (ENSPANG00000018404) #37
Macaca	ANCESTRAL SPECIES	3	ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b	ENSGT00940000154268.f.k.a	ENSGT00940000153095.g.b.a.a.a.b.a.a.b	ENSGT00950000182883.a.b.a	ENSGT00390000005530.a.b	ENSGT00950000183046.b	ENSGT00940000155405.kb	ENSGT00390000003051	ENSGT00390000008029	ENSGT00390000015038	ENSGT00940000161647	ENSGT00940000155000.u	ENSGT00760000119441.b	ENSGT00390000001994	ENSGT00390000002457	ENSGT00390000008610.a.b.a.b #22	ENSGT00510000046985.h.b.a.b	ENSGT00390000010029	ENSGT00940000159188	ENSGT00940000157683	ENSGT00910000146930	ENSGT00940000162732	ENSGT00940000163409	ENSGT00390000002695	ENSGT00910000148269	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874	ENSGT00390000008932.c.a.a	ENSGT00390000008932.c.b
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00940000155427	ENSGT00940000156923	ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b	ENSGT00940000154268.f.k.a	ENSGT00940000153095.g.b.a.a.a.b.a.a.b	ENSGT00950000182883.a.b.a	ENSGT00390000005530.a.b	ENSGT00950000183046.b	ENSGT00390000003051	ENSGT00390000008029	ENSGT00390000015038	ENSGT00940000161647	ENSGT00940000155000.u	ENSGT00390000001994	ENSGT00390000002457	ENSGT00390000008610.a.b.a.b #22	ENSGT00390000010029	ENSGT00940000159188	ENSGT00940000157683	ENSGT00910000146930	ENSGT00940000162732	ENSGT00940000163409	ENSGT00390000002695	ENSGT00910000148269	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b	ENSGT00940000158874	ENSGT00390000008932.c.a.a	ENSGT00390000008932.c.b	ENSGT00390000008932.c.a.b
Rhesus	MODERN SPECIES	5	LIPT2 (ENSMMUG00000013094) #8	ENSMMUG00000013093	POLD3 (ENSMMUG00000020643) #10	CHRDL2 (ENSMMUG00000020644) #11	RNF169 (ENSMMUG00000052870) #12	XRRA1 (ENSMMUG00000021039) #13	SPCS2 (ENSMMUG00000010685) #14	NEU3 (ENSMMUG00000010686) #15	ENSMMUG00000064190	SLCO2B1 (ENSMMUG00000009126) #19	OR2AT4 (ENSMMUG00000010688) #17	ENSMMUG00000047594 #18	TPBGL (ENSMMUG00000045580) #20	ARRB1 (ENSMMUG00000017529) #21	ENSMMUG00000060246	RPS3 (ENSMMUG00000009019) #22	KLHL35 (ENSMMUG00000063403) #23	GDPD5 (ENSMMUG00000009022) #25	SERPINH1 (ENSMMUG00000007675) #26	MAP6 (ENSMMUG00000007676) #27	MOGAT2 (ENSMMUG00000000506) #28	DGAT2 (ENSMMUG00000000185) #29	UVRAG (ENSMMUG00000000187) #30	WNT11 (ENSMMUG00000051614) #31	THAP12 (ENSMMUG00000048604) #32	GVQW3 (ENSMMUG00000059619) #33	EMSY (ENSMMUG00000022401) #35	LRRC32 (ENSMMUG00000022403) #36	TSKU (ENSMMUG00000058889) #37	ACER3 (ENSMMUG00000018168)	ENSMMUG00000050497
Crab-eating macaque	MODERN SPECIES	13	ENSMFAG00000050405	ENSMFAG00000040646	NXPH1 (ENSMFAG00000032515)	ICA1 (ENSMFAG00000046093)	GLCCI1 (ENSMFAG00000038435)	UMAD1 (ENSMFAG00000052878)	ENSMFAG00000042056	MIOS (ENSMFAG00000034560)	COL28A1 (ENSMFAG00000000186)	ENSMFAG00000053535	C1GALT1 (ENSMFAG00000031532)	ENSMFAG00000055818	ASNS (ENSMFAG00000041092)	TAC1 (ENSMFAG00000000287)	ENSMFAG00000057765	ENSMFAG00000046006 #22	ENSMFAG00000030531	DLX5 (ENSMFAG00000035900)	DLX6 (ENSMFAG00000048863)	ENSMFAG00000001022	ENSMFAG00000045122	SLC25A13 (ENSMFAG00000037896)	ENSMFAG00000007583	DYNC1I1 (ENSMFAG00000000094)	PDK4 (ENSMFAG00000035180)	ASB4 (ENSMFAG00000041748)	PON2 (ENSMFAG00000001162)	PON3 (ENSMFAG00000038783)	PON1 (ENSMFAG00000035691)	ENSMFAG00000055174	ENSMFAG00000062513
Pig-tailed macaque	DUPLICATION
Pig-tailed macaque	MODERN SPECIES	272	SLC28A3 (ENSMNEG00000036156)	NTRK2 (ENSMNEG00000029886)	AGTPBP1 (ENSMNEG00000027437)	ENSMNEG00000031442	NAA35 (ENSMNEG00000020190)	GOLM1 (ENSMNEG00000044908)	ENSMNEG00000028422	ISCA1 (ENSMNEG00000030750)	TUT7 (ENSMNEG00000031427)	GAS1 (ENSMNEG00000010226)	ENSMNEG00000043846	DAPK1 (ENSMNEG00000044385)	CTSL (ENSMNEG00000042546)	ENSMNEG00000032591	CDK20 (ENSMNEG00000034650)	ENSMNEG00000043228 #22	ENSMNEG00000014068	SPIN1 (ENSMNEG00000038251)	NXNL2 (ENSMNEG00000014676)	ENSMNEG00000037607	ENSMNEG00000031176	S1PR3 (ENSMNEG00000007167)	ENSMNEG00000018696	SHC3 (ENSMNEG00000036450)	CKS2 (ENSMNEG00000032033)	SECISBP2 (ENSMNEG00000031737)	SEMA4D (ENSMNEG00000033475)	GADD45G (ENSMNEG00000042753)	ENSMNEG00000012312	DIRAS2 (ENSMNEG00000003176)	SYK (ENSMNEG00000037700)
Pig-tailed macaque	MODERN SPECIES	534	PHF14 (ENSMNEG00000031850)	ENSMNEG00000030955	ENSMNEG00000029668	NXPH1 (ENSMNEG00000039744)	ICA1 (ENSMNEG00000044278)	GLCCI1 (ENSMNEG00000040369)	ENSMNEG00000032658	UMAD1 (ENSMNEG00000044071)	RPA3 (ENSMNEG00000044584)	MIOS (ENSMNEG00000036023)	COL28A1 (ENSMNEG00000035662)	C1GALT1 (ENSMNEG00000029681)	ENSMNEG00000031471	ASNS (ENSMNEG00000043217)	TAC1 (ENSMNEG00000040665)	ENSMNEG00000030799 #22	ENSMNEG00000031425	DLX5 (ENSMNEG00000021136)	DLX6 (ENSMNEG00000041272)	ENSMNEG00000029391	ENSMNEG00000045375	ENSMNEG00000045345	SLC25A13 (ENSMNEG00000031032)	DYNC1I1 (ENSMNEG00000040261)	PDK4 (ENSMNEG00000042419)	ASB4 (ENSMNEG00000034621)	PON2 (ENSMNEG00000037066)	PON1 (ENSMNEG00000041009)	PPP1R9A (ENSMNEG00000036491)	PEG10 (ENSMNEG00000037924)	SGCE (ENSMNEG00000044499)
Vervet Monkey	MODERN SPECIES		PPME1 (ENSCSAG00000004025)	P4HA3 (ENSCSAG00000004019)	PGM2L1 (ENSCSAG00000004011) #7	KCNE3 (ENSCSAG00000000622)	LIPT2 (ENSCSAG00000004004) #8	ENSCSAG00000004000 #10	CHRDL2 (ENSCSAG00000003992) #11	RNF169 (ENSCSAG00000003988) #12	XRRA1 (ENSCSAG00000003983) #13	ENSCSAG00000003967 #14	NEU3 (ENSCSAG00000003960) #15	OR2AT4 (ENSCSAG00000000621) #17	SLCO2B1 (ENSCSAG00000003953) #19	TPBGL (ENSCSAG00000000620) #20	ARRB1 (ENSCSAG00000003950) #21	RPS3 (ENSCSAG00000003937) #22	ENSCSAG00000000619	ENSCSAG00000003917 #23	GDPD5 (ENSCSAG00000003915) #25	SERPINH1 (ENSCSAG00000003909) #26	MAP6 (ENSCSAG00000003908) #27	MOGAT2 (ENSCSAG00000003906) #28	DGAT2 (ENSCSAG00000003904) #29	UVRAG (ENSCSAG00000003902) #30	WNT11 (ENSCSAG00000003899) #31	THAP12 (ENSCSAG00000003894) #32	EMSY (ENSCSAG00000003885) #35	LRRC32 (ENSCSAG00000003880) #36	TSKU (ENSCSAG00000000618) #37	ACER3 (ENSCSAG00000003878)	B3GNT6 (ENSCSAG00000000617)