Vertebrata ANCESTRAL SPECIES ENSGT00390000008610 #22 Gnathostomata ANCESTRAL SPECIES 121 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.B ENSGT00940000165320 ENSGT00390000008610 #22 ENSGT00940000153798.B ENSGT00940000160350 ENSGT00390000005140.b.a ENSGT00390000013989.b ENSGT00940000154769 ENSGT00390000012955 ENSGT00390000005948 ENSGT00940000158090 ENSGT00940000159524 ENSGT00510000048072 ENSGT00390000004396 #7 ENSGT00940000158967 #8 ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000153733.A Euteleostomi DUPLICATION Euteleostomi DUPLICATION Euteleostomi DUPLICATION Euteleostomi DUPLICATION Euteleostomi ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 Sarcopterygii ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 Tetrapoda ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 Amniota ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 Mammalia ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 Theria ANCESTRAL SPECIES 15 ENSGT00390000004396 #7 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Eutheria ANCESTRAL SPECIES 3 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00910000147753 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00940000169601 ENSGT00530000063516.a.a.d ##32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 Primates ANCESTRAL SPECIES ENSGT00910000147753 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Haplorrhini ANCESTRAL SPECIES ENSGT00910000147753 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Simiiformes ANCESTRAL SPECIES ENSGT00910000147753 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00910000148220 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 Catarrhini ANCESTRAL SPECIES 1 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181.eb.a.a #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00910000148220 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a #32 ENSGT00440000033232.d ENSGT00910000147490 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181.eb.a.a #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00910000148220 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a #32 ENSGT00440000033232.d ENSGT00910000147490 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048.b #15 ENSGT00440000038181.eb.a.a.b #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00910000148220 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a #32 ENSGT00440000033232.d ENSGT00910000147490 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 Vervet Monkey MODERN SPECIES PPME1 (ENSCSAG00000004025) #7 P4HA3 (ENSCSAG00000004019) #8 PGM2L1 (ENSCSAG00000004011) #9 KCNE3 (ENSCSAG00000000622) #10 LIPT2 (ENSCSAG00000004004) #11 ENSCSAG00000004000 #12 CHRDL2 (ENSCSAG00000003992) #13 RNF169 (ENSCSAG00000003988) #14 XRRA1 (ENSCSAG00000003983) #15 ENSCSAG00000003967 #16 NEU3 (ENSCSAG00000003960) #17 OR2AT4 (ENSCSAG00000000621) #18 SLCO2B1 (ENSCSAG00000003953) #19 TPBGL (ENSCSAG00000000620) #20 ARRB1 (ENSCSAG00000003950) #21 RPS3 (ENSCSAG00000003937) #22 ENSCSAG00000000619 #23 ENSCSAG00000003917 #24 GDPD5 (ENSCSAG00000003915) #25 SERPINH1 (ENSCSAG00000003909) #26 MAP6 (ENSCSAG00000003908) #27 MOGAT2 (ENSCSAG00000003906) #28 DGAT2 (ENSCSAG00000003904) #29 UVRAG (ENSCSAG00000003902) #30 WNT11 (ENSCSAG00000003899) #31 THAP12 (ENSCSAG00000003894) #32 EMSY (ENSCSAG00000003885) #33 LRRC32 (ENSCSAG00000003880) #34 TSKU (ENSCSAG00000000618) #35 ACER3 (ENSCSAG00000003878) #36 B3GNT6 (ENSCSAG00000000617) #37 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00390000006450 #11 ENSGT00940000166824 ENSGT00390000018145.cb.a.a.b.a ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048.b #15 ENSGT00440000038181.eb.a.a.b #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00510000046985.h.b.a.b ENSGT00390000006485.c #23 ENSGT00910000146972 ENSGT00390000008610.a.a ##22 ENSGT00940000161093 #24 ENSGT00910000148220 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a.d #32 ENSGT00440000033232.d Macaca ANCESTRAL SPECIES 3 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f.k.a ENSGT00940000153095.g.b.a.a.a.b.a.a.b ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ENSGT00390000003051 ENSGT00390000008029 ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00760000119441.b ENSGT00390000001994 ENSGT00390000002457 ENSGT00390000008610.a.b.a.b #22 ENSGT00510000046985.h.b.a.b ENSGT00390000010029 ENSGT00940000159188 ENSGT00940000157683 ENSGT00910000146930 ENSGT00940000162732 ENSGT00940000163409 ENSGT00390000002695 ENSGT00910000148269 ENSGT00940000159344 ENSGT00940000156032 ENSGT01030000234646.B.a.a.a.b ENSGT00940000158874 ENSGT00390000008932.c.a.a ENSGT00390000008932.c.b Macaca_a ANCESTRAL SPECIES 7 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f.k.a ENSGT00940000153095.g.b.a.a.a.b.a.a.b ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00390000003051 ENSGT00390000008029 ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00390000001994 ENSGT00390000002457 ENSGT00390000008610.a.b.a.b #22 ENSGT00390000010029 ENSGT00940000159188 ENSGT00940000157683 ENSGT00910000146930 ENSGT00940000162732 ENSGT00940000163409 ENSGT00390000002695 ENSGT00910000148269 ENSGT00940000159344 ENSGT00940000156032 ENSGT01030000234646.B.a.a.a.b ENSGT00940000158874 ENSGT00390000008932.c.a.a ENSGT00390000008932.c.b ENSGT00390000008932.c.a.b Rhesus MODERN SPECIES 5 LIPT2 (ENSMMUG00000013094) #11 ENSMMUG00000013093 POLD3 (ENSMMUG00000020643) #12 CHRDL2 (ENSMMUG00000020644) #13 RNF169 (ENSMMUG00000052870) #14 XRRA1 (ENSMMUG00000021039) #15 SPCS2 (ENSMMUG00000010685) #16 NEU3 (ENSMMUG00000010686) #17 ENSMMUG00000064190 SLCO2B1 (ENSMMUG00000009126) #19 OR2AT4 (ENSMMUG00000010688) #18 ENSMMUG00000047594 TPBGL (ENSMMUG00000045580) #20 ARRB1 (ENSMMUG00000017529) #21 ENSMMUG00000060246 RPS3 (ENSMMUG00000009019) #22 KLHL35 (ENSMMUG00000063403) #24 GDPD5 (ENSMMUG00000009022) #25 SERPINH1 (ENSMMUG00000007675) #26 MAP6 (ENSMMUG00000007676) #27 MOGAT2 (ENSMMUG00000000506) #28 DGAT2 (ENSMMUG00000000185) #29 UVRAG (ENSMMUG00000000187) #30 WNT11 (ENSMMUG00000051614) #31 THAP12 (ENSMMUG00000048604) #32 GVQW3 (ENSMMUG00000059619) EMSY (ENSMMUG00000022401) #33 LRRC32 (ENSMMUG00000022403) #34 TSKU (ENSMMUG00000058889) #35 ACER3 (ENSMMUG00000018168) #36 ENSMMUG00000050497 Crab-eating macaque MODERN SPECIES 13 ENSMFAG00000050405 ENSMFAG00000040646 NXPH1 (ENSMFAG00000032515) ICA1 (ENSMFAG00000046093) GLCCI1 (ENSMFAG00000038435) UMAD1 (ENSMFAG00000052878) ENSMFAG00000042056 MIOS (ENSMFAG00000034560) COL28A1 (ENSMFAG00000000186) ENSMFAG00000053535 C1GALT1 (ENSMFAG00000031532) ENSMFAG00000055818 ASNS (ENSMFAG00000041092) TAC1 (ENSMFAG00000000287) ENSMFAG00000057765 ENSMFAG00000046006 #22 ENSMFAG00000030531 DLX5 (ENSMFAG00000035900) DLX6 (ENSMFAG00000048863) ENSMFAG00000001022 ENSMFAG00000045122 SLC25A13 (ENSMFAG00000037896) ENSMFAG00000007583 DYNC1I1 (ENSMFAG00000000094) PDK4 (ENSMFAG00000035180) ASB4 (ENSMFAG00000041748) PON2 (ENSMFAG00000001162) PON3 (ENSMFAG00000038783) PON1 (ENSMFAG00000035691) ENSMFAG00000055174 ENSMFAG00000062513 Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 272 SLC28A3 (ENSMNEG00000036156) NTRK2 (ENSMNEG00000029886) AGTPBP1 (ENSMNEG00000027437) ENSMNEG00000031442 NAA35 (ENSMNEG00000020190) GOLM1 (ENSMNEG00000044908) ENSMNEG00000028422 ISCA1 (ENSMNEG00000030750) TUT7 (ENSMNEG00000031427) GAS1 (ENSMNEG00000010226) ENSMNEG00000043846 DAPK1 (ENSMNEG00000044385) CTSL (ENSMNEG00000042546) ENSMNEG00000032591 CDK20 (ENSMNEG00000034650) ENSMNEG00000043228 #22 ENSMNEG00000014068 SPIN1 (ENSMNEG00000038251) NXNL2 (ENSMNEG00000014676) ENSMNEG00000037607 ENSMNEG00000031176 S1PR3 (ENSMNEG00000007167) ENSMNEG00000018696 SHC3 (ENSMNEG00000036450) CKS2 (ENSMNEG00000032033) SECISBP2 (ENSMNEG00000031737) SEMA4D (ENSMNEG00000033475) GADD45G (ENSMNEG00000042753) ENSMNEG00000012312 DIRAS2 (ENSMNEG00000003176) SYK (ENSMNEG00000037700) Pig-tailed macaque MODERN SPECIES 534 PHF14 (ENSMNEG00000031850) ENSMNEG00000030955 ENSMNEG00000029668 NXPH1 (ENSMNEG00000039744) ICA1 (ENSMNEG00000044278) GLCCI1 (ENSMNEG00000040369) ENSMNEG00000032658 UMAD1 (ENSMNEG00000044071) RPA3 (ENSMNEG00000044584) MIOS (ENSMNEG00000036023) COL28A1 (ENSMNEG00000035662) C1GALT1 (ENSMNEG00000029681) ENSMNEG00000031471 ASNS (ENSMNEG00000043217) TAC1 (ENSMNEG00000040665) ENSMNEG00000030799 #22 ENSMNEG00000031425 DLX5 (ENSMNEG00000021136) DLX6 (ENSMNEG00000041272) ENSMNEG00000029391 ENSMNEG00000045375 ENSMNEG00000045345 SLC25A13 (ENSMNEG00000031032) DYNC1I1 (ENSMNEG00000040261) PDK4 (ENSMNEG00000042419) ASB4 (ENSMNEG00000034621) PON2 (ENSMNEG00000037066) PON1 (ENSMNEG00000041009) PPP1R9A (ENSMNEG00000036491) PEG10 (ENSMNEG00000037924) SGCE (ENSMNEG00000044499) Cercopithecinae_b ANCESTRAL SPECIES 32 ENSGT00390000006450 #11 ENSGT00940000166824 ENSGT00390000018145.cb.a.a.b.a ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048.b #15 ENSGT00440000038181.eb.a.a.b #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00390000006485.c #23 ENSGT00910000146972 ENSGT00940000161093 #24 ENSGT00910000148220 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a.d #32 ENSGT00440000033232.d ENSGT00910000147490 ENSGT00390000009554 #33 Olive baboon MODERN SPECIES 3 ENSPANG00000034020 ENSPANG00000040935 ENSPANG00000051353 ENSPANG00000014355 #12 ENSPANG00000045204 #11 ENSPANG00000050947 #10 ENSPANG00000037679 ##15 ENSPANG00000049173 ENSPANG00000034355 #16 ENSPANG00000010014 #17 ENSPANG00000048808 ENSPANG00000042782 #18 SLCO2B1 (ENSPANG00000005995) #19 TPBGL (ENSPANG00000050172) #20 ARRB1 (ENSPANG00000011945) #21 RPS3 (ENSPANG00000016549) #22 KLHL35 (ENSPANG00000033783) #24 ENSPANG00000042578 GDPD5 (ENSPANG00000011141) #25 SERPINH1 (ENSPANG00000033081) #26 MAP6 (ENSPANG00000048934) #27 MOGAT2 (ENSPANG00000008371) #28 DGAT2 (ENSPANG00000005994) #29 UVRAG (ENSPANG00000012471) #30 WNT11 (ENSPANG00000014353) #31 ENSPANG00000003101 #32 ENSPANG00000007883 EMSY (ENSPANG00000007638) #33 LRRC32 (ENSPANG00000015382) #34 ENSPANG00000049669 TSKU (ENSPANG00000018404) #35 Cercopithecinae_d ANCESTRAL SPECIES 27 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00390000018145.cb.a.a.b.a ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048.b #15 ENSGT00440000038181.eb.a.a.b #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00390000006485.c #23 ENSGT00910000146972 ENSGT00940000161093 #24 ENSGT00910000148220 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a.d #32 ENSGT00440000033232.d ENSGT00910000147490 ENSGT00390000009554 #33 Drill DUPLICATION Drill MODERN SPECIES 500 ENSMLEG00000042000 C9orf153 (ENSMLEG00000013492) ISCA1 (ENSMLEG00000038112) TUT7 (ENSMLEG00000027049) DAPK1 (ENSMLEG00000033258) CTSL (ENSMLEG00000036785) ENSMLEG00000035282 CDK20 (ENSMLEG00000035229) ENSMLEG00000044314 #22 ENSMLEG00000000797 SPIN1 (ENSMLEG00000035080) NXNL2 (ENSMLEG00000033545) ENSMLEG00000010964 S1PR3 (ENSMLEG00000028481) SHC3 (ENSMLEG00000004268) CKS2 (ENSMLEG00000035685) SECISBP2 (ENSMLEG00000028868) SEMA4D (ENSMLEG00000037083) ENSMLEG00000037750 GADD45G (ENSMLEG00000031770) Drill MODERN SPECIES 472 ICA1 (ENSMLEG00000044079) GLCCI1 (ENSMLEG00000040012) UMAD1 (ENSMLEG00000042525) RPA3 (ENSMLEG00000036302) MIOS (ENSMLEG00000037819) COL28A1 (ENSMLEG00000015407) C1GALT1 (ENSMLEG00000044453) ENSMLEG00000032398 ASNS (ENSMLEG00000028862) TAC1 (ENSMLEG00000040054) ENSMLEG00000017301 #22 SDHAF3 (ENSMLEG00000037669) DLX5 (ENSMLEG00000036746) DLX6 (ENSMLEG00000025971) ENSMLEG00000039568 ENSMLEG00000036598 ENSMLEG00000033727 SLC25A13 (ENSMLEG00000038932) DYNC1I1 (ENSMLEG00000042478) PDK4 (ENSMLEG00000037032) ASB4 (ENSMLEG00000036931) PON2 (ENSMLEG00000027200) PON3 (ENSMLEG00000036159) PON1 (ENSMLEG00000035189) PPP1R9A (ENSMLEG00000043621) PEG10 (ENSMLEG00000035418) Drill MODERN SPECIES 1404 ENSMLEG00000036513 ##15 ENSMLEG00000037619 #16 NEU3 (ENSMLEG00000036085) #17 ENSMLEG00000028250 OR2AT4 (ENSMLEG00000028367) #18 SLCO2B1 (ENSMLEG00000040970) #19 ARRB1 (ENSMLEG00000038818) #21 ENSMLEG00000001141 #23 RPS3 (ENSMLEG00000027047) #22 ENSMLEG00000029117 #24 GDPD5 (ENSMLEG00000038219) #25 SERPINH1 (ENSMLEG00000029842) #26 MAP6 (ENSMLEG00000003608) #27 MOGAT2 (ENSMLEG00000031977) #28 DGAT2 (ENSMLEG00000043052) #29 UVRAG (ENSMLEG00000043625) #30 Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 629 ENSCATG00000000743 NTRK2 (ENSCATG00000040423) AGTPBP1 (ENSCATG00000044576) ENSCATG00000001301 NAA35 (ENSCATG00000042793) ENSCATG00000033608 C9orf153 (ENSCATG00000042082) ISCA1 (ENSCATG00000042807) TUT7 (ENSCATG00000032888) GAS1 (ENSCATG00000011030) ENSCATG00000042393 DAPK1 (ENSCATG00000033936) CTSL (ENSCATG00000044799) ENSCATG00000010556 CDK20 (ENSCATG00000016899) ENSCATG00000011713 #22 ENSCATG00000016774 SPIN1 (ENSCATG00000030976) NXNL2 (ENSCATG00000038968) ENSCATG00000030800 ENSCATG00000022256 S1PR3 (ENSCATG00000005549) SHC3 (ENSCATG00000043648) CKS2 (ENSCATG00000036628) SECISBP2 (ENSCATG00000008304) SEMA4D (ENSCATG00000044690) ENSCATG00000012439 GADD45G (ENSCATG00000041187) Sooty mangabey MODERN SPECIES 185 ENSCATG00000044948 NXPH1 (ENSCATG00000037000) ICA1 (ENSCATG00000043201) GLCCI1 (ENSCATG00000044892) ENSCATG00000030314 UMAD1 (ENSCATG00000033366) RPA3 (ENSCATG00000028204) MIOS (ENSCATG00000011011) ENSCATG00000001666 COL28A1 (ENSCATG00000031059) C1GALT1 (ENSCATG00000030704) ENSCATG00000043335 ASNS (ENSCATG00000038317) TAC1 (ENSCATG00000034795) ENSCATG00000043998 #22 ENSCATG00000032188 DLX5 (ENSCATG00000044853) DLX6 (ENSCATG00000036157) ENSCATG00000041545 ENSCATG00000014825 ENSCATG00000037610 SLC25A13 (ENSCATG00000029550) DYNC1I1 (ENSCATG00000037835) PDK4 (ENSCATG00000031905) ASB4 (ENSCATG00000029891) PON2 (ENSCATG00000030239) PON3 (ENSCATG00000033359) ENSCATG00000039956 PON1 (ENSCATG00000034334) PPP1R9A (ENSCATG00000039595) Sooty mangabey MODERN SPECIES 545 PGM2L1 (ENSCATG00000029770) #9 LIPT2 (ENSCATG00000029187) #11 ENSCATG00000000611 ENSCATG00000043513 #12 CHRDL2 (ENSCATG00000018972) #13 RNF169 (ENSCATG00000043238) #14 XRRA1 (ENSCATG00000039406) #15 ENSCATG00000039999 #16 NEU3 (ENSCATG00000029743) #17 ENSCATG00000019868 OR2AT4 (ENSCATG00000009927) #18 ENSCATG00000029708 SLCO2B1 (ENSCATG00000028037) #19 TPBGL (ENSCATG00000010167) #20 ARRB1 (ENSCATG00000039690) #21 RPS3 (ENSCATG00000035348) #22 KLHL35 (ENSCATG00000042763) #24 ENSCATG00000041303 GDPD5 (ENSCATG00000030069) #25 SERPINH1 (ENSCATG00000043530) #26 MAP6 (ENSCATG00000044768) #27 MOGAT2 (ENSCATG00000038955) #28 DGAT2 (ENSCATG00000001407) #29 UVRAG (ENSCATG00000039451) #30 WNT11 (ENSCATG00000035881) #31 THAP12 (ENSCATG00000024587) #32 GVQW3 (ENSCATG00000035253) ENSCATG00000006180 EMSY (ENSCATG00000033145) #33 LRRC32 (ENSCATG00000039757) #34 TSKU (ENSCATG00000018628) #35 Rhinopithecus ANCESTRAL SPECIES 21 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000166824 ENSGT00390000018145.cb.a.a.b.a ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181.eb.a.a #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a #19 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a #32 ENSGT00440000033232.d ENSGT00910000147490 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000160984 #35 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b.a Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 800 AVPR1A (ENSRBIG00000033091) ENSRBIG00000032503 PPM1H (ENSRBIG00000013892) MON2 (ENSRBIG00000037597) USP15 (ENSRBIG00000042747) ENSRBIG00000012001 #22 FSHR (ENSRBIG00000033914) Black snub-nosed monkey MODERN SPECIES 775 PGM2L1 (ENSRBIG00000043298) #9 LIPT2 (ENSRBIG00000031912) #11 ENSRBIG00000001091 ENSRBIG00000011853 ENSRBIG00000044531 #12 CHRDL2 (ENSRBIG00000028182) #13 RNF169 (ENSRBIG00000035895) #14 XRRA1 (ENSRBIG00000036115) #15 ENSRBIG00000011964 ##16 NEU3 (ENSRBIG00000040960) #17 ENSRBIG00000043933 OR2AT4 (ENSRBIG00000036161) #18 ENSRBIG00000037921 SLCO2B1 (ENSRBIG00000035476) #19 ARRB1 (ENSRBIG00000041523) #21 RPS3 (ENSRBIG00000044916) #22 KLHL35 (ENSRBIG00000036873) #24 GDPD5 (ENSRBIG00000037527) #25 SERPINH1 (ENSRBIG00000028537) #26 MAP6 (ENSRBIG00000032932) #27 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 1304 LIPT2 (ENSRROG00000044982) #11 ENSRROG00000018216 ENSRROG00000040083 ENSRROG00000031930 ENSRROG00000041045 #12 CHRDL2 (ENSRROG00000029406) #13 RNF169 (ENSRROG00000034271) #14 XRRA1 (ENSRROG00000038284) #15 ENSRROG00000009662 #16 NEU3 (ENSRROG00000029086) #17 ENSRROG00000007318 OR2AT4 (ENSRROG00000042697) #18 ENSRROG00000038845 SLCO2B1 (ENSRROG00000029185) #19 ARRB1 (ENSRROG00000037258) #21 RPS3 (ENSRROG00000009870) #22 KLHL35 (ENSRROG00000042922) #24 GDPD5 (ENSRROG00000032119) #25 SERPINH1 (ENSRROG00000034821) #26 ENSRROG00000033527 #27 MOGAT2 (ENSRROG00000018289) #28 DGAT2 (ENSRROG00000029306) #29 UVRAG (ENSRROG00000038883) #30 WNT11 (ENSRROG00000031068) #31 THAP12 (ENSRROG00000026238) #32 GVQW3 (ENSRROG00000043820) ENSRROG00000020533 EMSY (ENSRROG00000039855) #33 LRRC32 (ENSRROG00000028668) #34 TSKU (ENSRROG00000032131) #35 ENSRROG00000012645 Golden snub-nosed monkey MODERN SPECIES 659 ENSRROG00000032977 #22 MEOX2 (ENSRROG00000035547) AGMO (ENSRROG00000034789) DGKB (ENSRROG00000043927) ENSRROG00000030221 Hominoidea ANCESTRAL SPECIES 1 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181.eb.b ##16 ENSGT00950000182944.A #17 ENSGT00940000162049.q ENSGT00940000163113 #18 ENSGT00940000162049.r ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00910000148220 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a.a #32 ENSGT00440000033232.d ENSGT00910000147490 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000160984 #35 Hominidae ANCESTRAL SPECIES 1 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181.eb.b ##16 ENSGT00950000182944.A #17 ENSGT00940000162049.q ENSGT00940000163113 #18 ENSGT00940000162049.r ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a.a #32 ENSGT00440000033232.d ENSGT00910000147490 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Orangutan MODERN SPECIES 2 PPME1 (ENSPPYG00000003671) #7 P4HA3 (ENSPPYG00000003673) #8 PGM2L1 (ENSPPYG00000003674) #9 KCNE3 (ENSPPYG00000003675) #10 LIPT2 (ENSPPYG00000003676) #11 POLD3 (ENSPPYG00000003677) CHRDL2 (ENSPPYG00000003678) #13 RNF169 (ENSPPYG00000003680) #14 XRRA1 (ENSPPYG00000003681) #15 ENSPPYG00000034798 SPCS2 (ENSPPYG00000003682) ##16 NEU3 (ENSPPYG00000033538) #17 SLCO2B1 (ENSPPYG00000003684) #19 TPBGL (ENSPPYG00000003686) #20 ARRB1 (ENSPPYG00000039190) #21 RPS3 (ENSPPYG00000003688) #22 KLHL35 (ENSPPYG00000003689) #24 GDPD5 (ENSPPYG00000003690) #25 SERPINH1 (ENSPPYG00000003691) #26 MAP6 (ENSPPYG00000003692) #27 MOGAT2 (ENSPPYG00000003693) #28 DGAT2 (ENSPPYG00000003694) #29 UVRAG (ENSPPYG00000003695) #30 WNT11 (ENSPPYG00000003696) #31 ENSPPYG00000040892 THAP12 (ENSPPYG00000003697) #32 ENSPPYG00000003698 EMSY (ENSPPYG00000003699) #33 LRRC32 (ENSPPYG00000003700) #34 TSKU (ENSPPYG00000003702) #35 ACER3 (ENSPPYG00000003703) #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181.eb.b ##16 ENSGT00950000182944.A #17 ENSGT00940000162049.q ENSGT00940000163113 #18 ENSGT00940000162049.r ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a.a #32 ENSGT00440000033232.d ENSGT00390000009554.o #33 ENSGT00910000147490 ENSGT00390000009554.p #33 ENSGT00940000162288 #34 ENSGT00940000160984 #35 Gorilla MODERN SPECIES 2 C2CD3 (ENSGGOG00000000345) PPME1 (ENSGGOG00000000347) #7 P4HA3 (ENSGGOG00000007853) #8 PGM2L1 (ENSGGOG00000007865) #9 KCNE3 (ENSGGOG00000041355) #10 ENSGGOG00000005892 #11 POLD3 (ENSGGOG00000012878) CHRDL2 (ENSGGOG00000012629) #13 RNF169 (ENSGGOG00000014493) #14 XRRA1 (ENSGGOG00000014505) #15 SPCS2 (ENSGGOG00000014500) ##16 NEU3 (ENSGGOG00000014507) #17 OR2AT4 (ENSGGOG00000023922) #18 SLCO2B1 (ENSGGOG00000007327) #19 ARRB1 (ENSGGOG00000009699) #21 RPS3 (ENSGGOG00000006519) #22 KLHL35 (ENSGGOG00000015839) #24 GDPD5 (ENSGGOG00000015848) #25 SERPINH1 (ENSGGOG00000005397) #26 MAP6 (ENSGGOG00000005400) #27 DGAT2 (ENSGGOG00000002910) #29 UVRAG (ENSGGOG00000002911) #30 WNT11 (ENSGGOG00000015024) #31 THAP12 (ENSGGOG00000006152) #32 GVQW3 (ENSGGOG00000027994) EMSY (ENSGGOG00000012926) #33 LRRC32 (ENSGGOG00000001727) #34 TSKU (ENSGGOG00000008670) #35 ACER3 (ENSGGOG00000003818) #36 B3GNT6 (ENSGGOG00000000016) #37 CAPN5 (ENSGGOG00000008071) Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181.eb.b ##16 ENSGT00950000182944.A #17 ENSGT00940000162049.q ENSGT00940000163113 #18 ENSGT00940000162049.r ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a.a #32 ENSGT00440000033232.d ENSGT00390000009554.o #33 ENSGT00910000147490 ENSGT00390000009554.p #33 ENSGT00940000162288 #34 ENSGT00940000160984 #35 Human MODERN SPECIES 2 PPME1 (ENSG00000214517) #7 P4HA3 (ENSG00000149380) #8 PGM2L1 (ENSG00000165434) #9 KCNE3 (ENSG00000175538) #10 LIPT2 (ENSG00000175536) #11 POLD3 (ENSG00000077514) CHRDL2 (ENSG00000054938) #13 RNF169 (ENSG00000166439) #14 XRRA1 (ENSG00000166435) #15 SPCS2 (ENSG00000118363) ##16 NEU3 (ENSG00000162139) #17 OR2AT4 (ENSG00000171561) #18 SLCO2B1 (ENSG00000137491) #19 TPBGL (ENSG00000261594) #20 ARRB1 (ENSG00000137486) #21 RPS3 (ENSG00000149273) #22 KLHL35 (ENSG00000149243) #24 GDPD5 (ENSG00000158555) #25 SERPINH1 (ENSG00000149257) #26 MAP6 (ENSG00000171533) #27 MOGAT2 (ENSG00000166391) #28 DGAT2 (ENSG00000062282) #29 UVRAG (ENSG00000198382) #30 WNT11 (ENSG00000085741) #31 THAP12 (ENSG00000137492) #32 GVQW3 (ENSG00000179240) EMSY (ENSG00000158636) #33 LRRC32 (ENSG00000137507) #34 TSKU (ENSG00000182704) #35 ACER3 (ENSG00000078124) #36 B3GNT6 (ENSG00000198488) #37 Pan ANCESTRAL SPECIES 1 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181.eb.b ##16 ENSGT00950000182944.A #17 ENSGT00940000162049.q ENSGT00940000163113 #18 ENSGT00940000162049.r ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a.a #32 ENSGT00440000033232.d ENSGT00390000009554.o #33 ENSGT00910000147490 ENSGT00390000009554.p #33 ENSGT00940000162288 #34 ENSGT00940000160984 #35 Bonobo MODERN SPECIES 2 PGM2L1 (ENSPPAG00000029213) #9 KCNE3 (ENSPPAG00000022031) #10 LIPT2 (ENSPPAG00000034746) #11 POLD3 (ENSPPAG00000042261) CHRDL2 (ENSPPAG00000028622) #13 RNF169 (ENSPPAG00000020912) #14 XRRA1 (ENSPPAG00000041615) #15 ENSPPAG00000043856 SPCS2 (ENSPPAG00000030175) ##16 NEU3 (ENSPPAG00000040988) #17 ENSPPAG00000042780 OR2AT4 (ENSPPAG00000043903) #18 ENSPPAG00000015262 SLCO2B1 (ENSPPAG00000031133) #19 ARRB1 (ENSPPAG00000040868) #21 RPS3 (ENSPPAG00000029211) #22 KLHL35 (ENSPPAG00000010945) #24 GDPD5 (ENSPPAG00000042473) #25 ENSPPAG00000041483 #26 ENSPPAG00000040024 #27 MOGAT2 (ENSPPAG00000012175) #28 DGAT2 (ENSPPAG00000015345) #29 UVRAG (ENSPPAG00000027735) #30 WNT11 (ENSPPAG00000010959) #31 ENSPPAG00000030327 ENSPPAG00000038460 #33 ENSPPAG00000028053 THAP12 (ENSPPAG00000005479) #32 ENSPPAG00000027471 #33 LRRC32 (ENSPPAG00000028327) #34 TSKU (ENSPPAG00000025259) #35 Chimpanzee MODERN SPECIES 2 PGM2L1 (ENSPTRG00000004064) #9 KCNE3 (ENSPTRG00000038909) #10 LIPT2 (ENSPTRG00000004066) #11 POLD3 (ENSPTRG00000004067) CHRDL2 (ENSPTRG00000004069) #13 RNF169 (ENSPTRG00000049248) #14 XRRA1 (ENSPTRG00000004071) #15 SPCS2 (ENSPTRG00000004073) ##16 NEU3 (ENSPTRG00000043132) #17 ENSPTRG00000043832 OR2AT4 (ENSPTRG00000004076) #18 ENSPTRG00000047698 SLCO2B1 (ENSPTRG00000004078) #19 TPBGL (ENSPTRG00000052868) #20 ARRB1 (ENSPTRG00000004079) #21 RPS3 (ENSPTRG00000048574) #22 KLHL35 (ENSPTRG00000004081) #24 GDPD5 (ENSPTRG00000046453) #25 SERPINH1 (ENSPTRG00000004083) #26 MAP6 (ENSPTRG00000004085) #27 MOGAT2 (ENSPTRG00000004086) #28 DGAT2 (ENSPTRG00000004087) #29 UVRAG (ENSPTRG00000004088) #30 WNT11 (ENSPTRG00000004090) #31 THAP12 (ENSPTRG00000004091) #32 ENSPTRG00000028470 ENSPTRG00000049644 EMSY (ENSPTRG00000004093) #33 LRRC32 (ENSPTRG00000004094) #34 TSKU (ENSPTRG00000028468) #35 ACER3 (ENSPTRG00000004096) #36 Platyrrhini ANCESTRAL SPECIES 3 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00910000148220 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 575 KCNE3 (ENSANAG00000014115) #10 ENSANAG00000020663 #11 POLD3 (ENSANAG00000030270) CHRDL2 (ENSANAG00000025866) #13 RNF169 (ENSANAG00000025789) #14 XRRA1 (ENSANAG00000037118) #15 ENSANAG00000035609 #16 NEU3 (ENSANAG00000031004) #17 ENSANAG00000033225 SLCO2B1 (ENSANAG00000027304) #19 TPBGL (ENSANAG00000022236) #20 ARRB1 (ENSANAG00000037078) #21 RPS3 (ENSANAG00000027669) #22 KLHL35 (ENSANAG00000029592) #24 GDPD5 (ENSANAG00000029652) #25 SERPINH1 (ENSANAG00000002099) #26 ENSANAG00000028881 #27 ENSANAG00000025561 #27 MOGAT2 (ENSANAG00000030684) #28 DGAT2 (ENSANAG00000033159) #29 UVRAG (ENSANAG00000037389) #30 WNT11 (ENSANAG00000023221) #31 THAP12 (ENSANAG00000034553) #32 GVQW3 (ENSANAG00000033324) EMSY (ENSANAG00000037605) #33 LRRC32 (ENSANAG00000036098) #34 TSKU (ENSANAG00000028760) #35 ACER3 (ENSANAG00000031758) #36 Mas night monkey MODERN SPECIES 1110 ENSANAG00000031949 DNAI7 (ENSANAG00000030533) ENSANAG00000020002 KRAS (ENSANAG00000030296) ENSANAG00000020670 LMNTD1 (ENSANAG00000015391) RASSF8 (ENSANAG00000019236) BHLHE41 (ENSANAG00000035475) ENSANAG00000031081 SSPN (ENSANAG00000025202) ITPR2 (ENSANAG00000022196) INTS13 (ENSANAG00000022317) FGFR1OP2 (ENSANAG00000035478) TM7SF3 (ENSANAG00000030204) MED21 (ENSANAG00000025951) ENSANAG00000023438 #22 STK38L (ENSANAG00000025609) BMAL2 (ENSANAG00000034090) SMCO2 (ENSANAG00000030042) Mas night monkey MODERN SPECIES 964 NALCN (ENSANAG00000002054) ITGBL1 (ENSANAG00000020933) FGF14 (ENSANAG00000021289) TPP2 (ENSANAG00000001887) METTL21C (ENSANAG00000029712) TEX30 (ENSANAG00000020101) POGLUT2 (ENSANAG00000029223) ENSANAG00000020094 ENSANAG00000025711 SLC10A2 (ENSANAG00000027554) ENSANAG00000030812 EFNB2 (ENSANAG00000023792) ARGLU1 (ENSANAG00000025331) ENSANAG00000028970 NALF1 (ENSANAG00000022602) ENSANAG00000022561 #22 LIG4 (ENSANAG00000012446) ABHD13 (ENSANAG00000031542) TNFSF13B (ENSANAG00000031847) MYO16 (ENSANAG00000030011) IRS2 (ENSANAG00000023271) Cebidae ANCESTRAL SPECIES ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00910000148220 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Marmoset MODERN SPECIES 2 ENSCJAG00000053703 POLD3 (ENSCJAG00000015657) CHRDL2 (ENSCJAG00000015616) #13 RNF169 (ENSCJAG00000015610) #14 ENSCJAG00000083650 XRRA1 (ENSCJAG00000015587) #15 SPCS2 (ENSCJAG00000015576) #16 NEU3 (ENSCJAG00000015573) #17 ENSCJAG00000067324 ENSCJAG00000022088 OR2AT4 (ENSCJAG00000015558) #18 SLCO2B1 (ENSCJAG00000015525) #19 TPBGL (ENSCJAG00000022087) #20 ARRB1 (ENSCJAG00000015459) #21 ENSCJAG00000072627 RPS3 (ENSCJAG00000015424) #22 KLHL35 (ENSCJAG00000015421) #24 GDPD5 (ENSCJAG00000015399) #25 SERPINH1 (ENSCJAG00000015377) #26 MAP6 (ENSCJAG00000015365) #27 MOGAT2 (ENSCJAG00000015357) #28 DGAT2 (ENSCJAG00000015337) #29 UVRAG (ENSCJAG00000015319) #30 WNT11 (ENSCJAG00000015296) #31 THAP12 (ENSCJAG00000012300) #32 GVQW3 (ENSCJAG00000015286) EMSY (ENSCJAG00000015204) #33 LRRC32 (ENSCJAG00000041496) #34 TSKU (ENSCJAG00000015198) #35 ACER3 (ENSCJAG00000015179) #36 B3GNT6 (ENSCJAG00000048141) #37 Cebidae_a ANCESTRAL SPECIES 10 ENSGT00510000048072 ENSGT00390000004396 #7 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00630000089910.ib.b.a ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00910000148220 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Capuchin DUPLICATION Capuchin MODERN SPECIES 28 SC5D (ENSCCAG00000014865) TECTA (ENSCCAG00000020047) TBCEL (ENSCCAG00000019888) GRIK4 (ENSCCAG00000009167) ARHGEF12 (ENSCCAG00000027602) TLCD5 (ENSCCAG00000029279) POU2F3 (ENSCCAG00000037738) OAF (ENSCCAG00000020197) TRIM29 (ENSCCAG00000021431) NECTIN1 (ENSCCAG00000022347) THY1 (ENSCCAG00000030161) USP2 (ENSCCAG00000033760) MFRP (ENSCCAG00000037590) ENSCCAG00000021418 RNF26 (ENSCCAG00000019825) ENSCCAG00000021048 #22 MCAM (ENSCCAG00000032195) ENSCCAG00000034893 CBL (ENSCCAG00000030401) CCDC153 (ENSCCAG00000025905) PDZD3 (ENSCCAG00000033692) NLRX1 (ENSCCAG00000036459) ABCG4 (ENSCCAG00000036509) HINFP (ENSCCAG00000037215) C2CD2L (ENSCCAG00000017908) DPAGT1 (ENSCCAG00000021664) H2AX (ENSCCAG00000012122) ENSCCAG00000037210 HMBS (ENSCCAG00000035326) VPS11 (ENSCCAG00000037650) HYOU1 (ENSCCAG00000026008) Capuchin MODERN SPECIES 79 C2CD3 (ENSCCAG00000030238) PPME1 (ENSCCAG00000026198) #7 P4HA3 (ENSCCAG00000020903) #8 PGM2L1 (ENSCCAG00000036451) #9 ENSCCAG00000021883 LIPT2 (ENSCCAG00000036486) #11 POLD3 (ENSCCAG00000020511) CHRDL2 (ENSCCAG00000022957) #13 RNF169 (ENSCCAG00000033395) #14 XRRA1 (ENSCCAG00000028930) #15 SPCS2 (ENSCCAG00000021321) #16 NEU3 (ENSCCAG00000030531) #17 SLCO2B1 (ENSCCAG00000020122) #19 TPBGL (ENSCCAG00000020228) #20 ARRB1 (ENSCCAG00000022418) #21 RPS3 (ENSCCAG00000022155) #22 KLHL35 (ENSCCAG00000024110) #24 GDPD5 (ENSCCAG00000037483) #25 SERPINH1 (ENSCCAG00000036630) #26 MAP6 (ENSCCAG00000038045) #27 ENSCCAG00000019602 MOGAT2 (ENSCCAG00000033399) #28 DGAT2 (ENSCCAG00000025871) #29 UVRAG (ENSCCAG00000004406) #30 WNT11 (ENSCCAG00000006507) #31 THAP12 (ENSCCAG00000030247) #32 GVQW3 (ENSCCAG00000017675) EMSY (ENSCCAG00000033043) #33 LRRC32 (ENSCCAG00000036797) #34 ACER3 (ENSCCAG00000022320) #36 CAPN5 (ENSCCAG00000032879) Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 50 PPME1 (ENSSBOG00000031236) #7 P4HA3 (ENSSBOG00000021114) #8 PGM2L1 (ENSSBOG00000021467) #9 ENSSBOG00000029238 ENSSBOG00000026074 ENSSBOG00000016069 LIPT2 (ENSSBOG00000028686) #11 POLD3 (ENSSBOG00000026466) CHRDL2 (ENSSBOG00000030089) #13 RNF169 (ENSSBOG00000025127) #14 XRRA1 (ENSSBOG00000023521) #15 ENSSBOG00000018610 #16 NEU3 (ENSSBOG00000032626) #17 SLCO2B1 (ENSSBOG00000029587) #19 ARRB1 (ENSSBOG00000027344) #21 RPS3 (ENSSBOG00000021847) #22 KLHL35 (ENSSBOG00000032736) #24 GDPD5 (ENSSBOG00000029684) #25 ENSSBOG00000015754 SERPINH1 (ENSSBOG00000023324) #26 MAP6 (ENSSBOG00000034653) #27 MOGAT2 (ENSSBOG00000028341) #28 DGAT2 (ENSSBOG00000034703) #29 UVRAG (ENSSBOG00000029244) #30 WNT11 (ENSSBOG00000020772) #31 GVQW3 (ENSSBOG00000031479) EMSY (ENSSBOG00000035462) #33 LRRC32 (ENSSBOG00000034148) #34 OPCML (ENSSBOG00000026714) NTM (ENSSBOG00000006706) SNX19 (ENSSBOG00000023782) Bolivian squirrel monkey MODERN SPECIES 70 ENSSBOG00000018830 TEX30 (ENSSBOG00000021338) POGLUT2 (ENSSBOG00000019020) ENSSBOG00000024890 METTL21EP (ENSSBOG00000032455) ENSSBOG00000027930 SLC10A2 (ENSSBOG00000033035) ENSSBOG00000025314 ENSSBOG00000021042 EFNB2 (ENSSBOG00000030780) ARGLU1 (ENSSBOG00000025713) ENSSBOG00000021398 NALF1 (ENSSBOG00000025953) ENSSBOG00000035667 ENSSBOG00000023659 ENSSBOG00000024651 #22 LIG4 (ENSSBOG00000019029) ABHD13 (ENSSBOG00000019782) TNFSF13B (ENSSBOG00000033235) MYO16 (ENSSBOG00000036268) IRS2 (ENSSBOG00000033562) COL4A1 (ENSSBOG00000035112) COL4A2 (ENSSBOG00000022396) NAXD (ENSSBOG00000021199) CARS2 (ENSSBOG00000018552) ING1 (ENSSBOG00000018909) ANKRD10 (ENSSBOG00000024976) ARHGEF7 (ENSSBOG00000014203) TEX29 (ENSSBOG00000029787) SPACA7 (ENSSBOG00000032331) TUBGCP3 (ENSSBOG00000031378) Tarsier DUPLICATION Tarsier MODERN SPECIES 5823 IPO8 (ENSTSYG00000004436) CAPRIN2 (ENSTSYG00000008590) ENSTSYG00000034881 #22 Tarsier MODERN SPECIES 2901 ARRB1 (ENSTSYG00000033736) #21 RPS3 (ENSTSYG00000008664) #22 ENSTSYG00000033862 #24 GDPD5 (ENSTSYG00000029959) #25 Strepsirrhini ANCESTRAL SPECIES 6 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.m ENSGT00940000163113 #18 ENSGT00940000162049.n ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Bushbaby MODERN SPECIES 116 KCNE3 (ENSOGAG00000032594) #10 LIPT2 (ENSOGAG00000015602) #11 POLD3 (ENSOGAG00000015605) CHRDL2 (ENSOGAG00000015608) #13 RNF169 (ENSOGAG00000015611) #14 XRRA1 (ENSOGAG00000015617) #15 SPCS2 (ENSOGAG00000015621) #16 NEU3 (ENSOGAG00000015623) #17 ENSOGAG00000026432 OR2AT4 (ENSOGAG00000024992) #18 ENSOGAG00000034601 ENSOGAG00000030028 ENSOGAG00000002927 SLCO2B1 (ENSOGAG00000011545) #19 ARRB1 (ENSOGAG00000011549) #21 RPS3 (ENSOGAG00000005318) #22 KLHL35 (ENSOGAG00000005323) #24 GDPD5 (ENSOGAG00000027265) #25 SERPINH1 (ENSOGAG00000032244) #26 MAP6 (ENSOGAG00000005329) #27 MOGAT2 (ENSOGAG00000000329) #28 DGAT2 (ENSOGAG00000000330) #29 UVRAG (ENSOGAG00000025371) #30 WNT11 (ENSOGAG00000001568) #31 ENSOGAG00000001569 #32 GVQW3 (ENSOGAG00000027877) EMSY (ENSOGAG00000011434) #33 LRRC32 (ENSOGAG00000010967) #34 ENSOGAG00000029463 TSKU (ENSOGAG00000016850) #35 ACER3 (ENSOGAG00000016854) #36 Lemuriformes ANCESTRAL SPECIES 13 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.m ENSGT00940000163113 #18 ENSGT00940000162049.n ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 26 ENSMICG00000038125 ENSMICG00000043280 ENSMICG00000043516 ENSMICG00000030581 ENSMICG00000045927 ENSMICG00000045366 ENSMICG00000035995 ENSMICG00000037802 ENSMICG00000048114 ENSMICG00000033265 ENSMICG00000031408 ENSMICG00000046604 ENSMICG00000029713 IGKV5-2 (ENSMICG00000032664) ENSMICG00000006462 ENSMICG00000027280 #22 EIF2AK3 (ENSMICG00000013955) TEX37 (ENSMICG00000013949) FOXI3 (ENSMICG00000031310) ENSMICG00000046528 ENSMICG00000033802 THNSL2 (ENSMICG00000011437) FABP1 (ENSMICG00000033515) SMYD1 (ENSMICG00000037338) ENSMICG00000011409 CD8A (ENSMICG00000005400) RMND5A (ENSMICG00000047554) ENSMICG00000033876 RNF103 (ENSMICG00000038067) ENSMICG00000005492 KDM3A (ENSMICG00000000781) Mouse lemur MODERN SPECIES 27 P4HA3 (ENSMICG00000002249) #8 ENSMICG00000002256 #9 LIPT2 (ENSMICG00000045741) #11 POLD3 (ENSMICG00000011102) CHRDL2 (ENSMICG00000011134) #13 RNF169 (ENSMICG00000046917) #14 XRRA1 (ENSMICG00000027081) #15 ENSMICG00000011153 #16 NEU3 (ENSMICG00000046723) #17 ENSMICG00000029787 ENSMICG00000035272 ENSMICG00000032041 ENSMICG00000038601 SLCO2B1 (ENSMICG00000011163) #19 ARRB1 (ENSMICG00000011177) #21 RPS3 (ENSMICG00000030910) #22 KLHL35 (ENSMICG00000045018) #24 GDPD5 (ENSMICG00000011193) #25 SERPINH1 (ENSMICG00000015249) #26 MAP6 (ENSMICG00000015256) #27 MOGAT2 (ENSMICG00000015272) #28 DGAT2 (ENSMICG00000015277) #29 UVRAG (ENSMICG00000015281) #30 WNT11 (ENSMICG00000015306) #31 THAP12 (ENSMICG00000006139) #32 EMSY (ENSMICG00000006143) #33 LRRC32 (ENSMICG00000026468) #34 ACER3 (ENSMICG00000013908) #36 CAPN5 (ENSMICG00000013928) MYO7A (ENSMICG00000013944) GDPD4 (ENSMICG00000046391) Lemuriformes_a ANCESTRAL SPECIES 50 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.m ENSGT00940000163113 #18 ENSGT00940000162049.n ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.a ##32 ENSGT00530000063516.a.a.d ##32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 Coquerels sifaka MODERN SPECIES 338 P4HA3 (ENSPCOG00000010138) #8 PGM2L1 (ENSPCOG00000026248) #9 LIPT2 (ENSPCOG00000018043) #11 POLD3 (ENSPCOG00000024555) ENSPCOG00000020966 CHRDL2 (ENSPCOG00000012970) #13 RNF169 (ENSPCOG00000016721) #14 XRRA1 (ENSPCOG00000020432) #15 ENSPCOG00000017986 #16 NEU3 (ENSPCOG00000014477) #17 ENSPCOG00000026765 ENSPCOG00000004225 ENSPCOG00000026342 SLCO2B1 (ENSPCOG00000026296) #19 ARRB1 (ENSPCOG00000020960) #21 RPS3 (ENSPCOG00000028750) #22 KLHL35 (ENSPCOG00000012453) #24 GDPD5 (ENSPCOG00000023523) #25 SERPINH1 (ENSPCOG00000016388) #26 MAP6 (ENSPCOG00000028415) #27 MOGAT2 (ENSPCOG00000017739) #28 DGAT2 (ENSPCOG00000019069) #29 UVRAG (ENSPCOG00000020635) #30 WNT11 (ENSPCOG00000014058) #31 ENSPCOG00000027615 ##32 EMSY (ENSPCOG00000020972) #33 LRRC32 (ENSPCOG00000028697) #34 ACER3 (ENSPCOG00000013273) #36 CAPN5 (ENSPCOG00000021800) MYO7A (ENSPCOG00000001371) GDPD4 (ENSPCOG00000026020) Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 513 SNX13 (ENSPSMG00000016751) ENSPSMG00000016770 AHR (ENSPSMG00000016802) AGR3 (ENSPSMG00000016834) AGR2 (ENSPSMG00000016851) TSPAN13 (ENSPSMG00000016888) BZW2 (ENSPSMG00000016967) ANKMY2 (ENSPSMG00000017011) LRRC72 (ENSPSMG00000017047) SOSTDC1 (ENSPSMG00000017059) CRPPA (ENSPSMG00000017090) MEOX2 (ENSPSMG00000017101) AGMO (ENSPSMG00000017106) DGKB (ENSPSMG00000017240) ETV1 (ENSPSMG00000017451) ENSPSMG00000017477 #22 ARL4A (ENSPSMG00000017488) SCIN (ENSPSMG00000017502) ENSPSMG00000017510 ENSPSMG00000017516 VWDE (ENSPSMG00000017551) TMEM106B (ENSPSMG00000017565) Greater bamboo lemur MODERN SPECIES 747 ENSPSMG00000002794 #22 ENSPSMG00000002802 ACTR3 (ENSPSMG00000002857) SLC35F5 (ENSPSMG00000002919) GPR39 (ENSPSMG00000003080) ENSPSMG00000003082 LYPD1 (ENSPSMG00000003094) NCKAP5 (ENSPSMG00000003118) Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 276 PGM2L1 (ENSPSMG00000003486) #9 KCNE3 (ENSPSMG00000003468) #10 LIPT2 (ENSPSMG00000003465) #11 POLD3 (ENSPSMG00000003441) CHRDL2 (ENSPSMG00000003418) #13 RNF169 (ENSPSMG00000003387) #14 XRRA1 (ENSPSMG00000003365) #15 SPCS2 (ENSPSMG00000003324) #16 NEU3 (ENSPSMG00000003293) #17 ENSPSMG00000003281 OR2AT4 (ENSPSMG00000003274) #18 ENSPSMG00000003266 SLCO2B1 (ENSPSMG00000003254) #19 TPBGL (ENSPSMG00000003242) #20 ARRB1 (ENSPSMG00000003120) #21 ENSPSMG00000002960 #22 KLHL35 (ENSPSMG00000002917) #24 GDPD5 (ENSPSMG00000002722) #25 SERPINH1 (ENSPSMG00000002607) #26 Greater bamboo lemur MODERN SPECIES 638 UCK1 (ENSPSMG00000017613) POMT1 (ENSPSMG00000017780) PRRC2B (ENSPSMG00000018172) PLPP7 (ENSPSMG00000018572) FAM78A (ENSPSMG00000018576) NUP214 (ENSPSMG00000018673) ENSPSMG00000018705 #22 AIF1L (ENSPSMG00000018725) LAMC3 (ENSPSMG00000018744) FIBCD1 (ENSPSMG00000018761) QRFP (ENSPSMG00000018767) ABL1 (ENSPSMG00000018845) EXOSC2 (ENSPSMG00000018996) PRDM12 (ENSPSMG00000019030) FUBP3 (ENSPSMG00000019055) ASS1 (ENSPSMG00000019105) HMCN2 (ENSPSMG00000019168) GPR107 (ENSPSMG00000019182) FNBP1 (ENSPSMG00000019223) USP20 (ENSPSMG00000019349) C9orf78 (ENSPSMG00000019422) TOR1A (ENSPSMG00000019434) Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00940000169601 ENSGT00530000063516.a.a.d ##32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 Tree shrew MODERN SPECIES 3807 OR2AT4 (ENSTBEG00000005160) #18 ENSTBEG00000005344 #19 ARRB1 (ENSTBEG00000006210) #21 RPS3 (ENSTBEG00000007053) #22 ENSTBEG00000007259 #24 Glires ANCESTRAL SPECIES 1 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00940000169601 ENSGT00530000063516.a.a.d ##32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 Lagomorpha ANCESTRAL SPECIES 5 ENSGT00390000004396 #7 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163.h #26 ENSGT00940000156163.g.b #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Pika MODERN SPECIES 2116 ENSOPRG00000009496 #22 Rabbit DUPLICATION Rabbit MODERN SPECIES 15 TMTC3 (ENSOCUG00000004320) CEP290 (ENSOCUG00000004290) C12orf29 (ENSOCUG00000004284) C12orf50 (ENSOCUG00000004280) ENSOCUG00000037227 ENSOCUG00000037685 ENSOCUG00000027647 ENSOCUG00000027442 ENSOCUG00000038571 ENSOCUG00000023687 ENSOCUG00000034779 ENSOCUG00000034843 MGAT4C (ENSOCUG00000017314) NTS (ENSOCUG00000010336) RASSF9 (ENSOCUG00000017872) ENSOCUG00000036577 #22 ALX1 (ENSOCUG00000009125) LRRIQ1 (ENSOCUG00000017527) ENSOCUG00000034706 TSPAN19 (ENSOCUG00000037319) SLC6A15 (ENSOCUG00000014066) TMTC2 (ENSOCUG00000017847) METTL25 (ENSOCUG00000017825) CCDC59 (ENSOCUG00000017824) ENSOCUG00000036764 PPFIA2 (ENSOCUG00000015770) ACSS3 (ENSOCUG00000015752) LIN7A (ENSOCUG00000004203) MYF5 (ENSOCUG00000025477) MYF6 (ENSOCUG00000001457) PTPRQ (ENSOCUG00000011455) Rabbit MODERN SPECIES P4HA3 (ENSOCUG00000010111) #8 PGM2L1 (ENSOCUG00000005709) #9 ENSOCUG00000016447 #10 POLD3 (ENSOCUG00000002523) CHRDL2 (ENSOCUG00000022782) #13 RNF169 (ENSOCUG00000001789) #14 ENSOCUG00000026028 XRRA1 (ENSOCUG00000012514) #15 ENSOCUG00000038071 #16 NEU3 (ENSOCUG00000012531) #17 ENSOCUG00000036432 OR2AT4 (ENSOCUG00000027488) #18 SLCO2B1 (ENSOCUG00000014225) #19 TPBGL (ENSOCUG00000014231) #20 ARRB1 (ENSOCUG00000026291) #21 RPS3 (ENSOCUG00000022412) #22 KLHL35 (ENSOCUG00000012395) #24 GDPD5 (ENSOCUG00000026378) #25 ENSOCUG00000032044 #26 ENSOCUG00000026029 #26 ENSOCUG00000003302 #27 MOGAT2 (ENSOCUG00000014215) #28 ENSOCUG00000033370 UVRAG (ENSOCUG00000014223) #30 WNT11 (ENSOCUG00000001726) #31 THAP12 (ENSOCUG00000009178) #32 ENSOCUG00000035359 EMSY (ENSOCUG00000017880) #33 LRRC32 (ENSOCUG00000015394) #34 TSKU (ENSOCUG00000021411) #35 ACER3 (ENSOCUG00000021559) #36 Rodentia ANCESTRAL SPECIES 1 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00530000063516.a.a.d ##32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 Rodentia_B ANCESTRAL SPECIES 33 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Myomorpha ANCESTRAL SPECIES 13 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01070000253969 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Muroidea ANCESTRAL SPECIES 12 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01070000253969 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1254 ENSNGAG00000013165 Chrdl2 (ENSNGAG00000000179) #13 Rnf169 (ENSNGAG00000019560) #14 Xrra1 (ENSNGAG00000012048) #15 Spcs2 (ENSNGAG00000013220) #16 Neu3 (ENSNGAG00000011806) #17 ENSNGAG00000016993 ENSNGAG00000016422 Slco2b1 (ENSNGAG00000001998) #19 Tpbgl (ENSNGAG00000000289) #20 Arrb1 (ENSNGAG00000010423) #21 Rps3 (ENSNGAG00000015514) #22 Klhl35 (ENSNGAG00000009818) #24 ENSNGAG00000013714 Serpinh1 (ENSNGAG00000015539) #26 Map6 (ENSNGAG00000013077) #27 Mogat2 (ENSNGAG00000015554) #28 Dgat2 (ENSNGAG00000012414) #29 Uvrag (ENSNGAG00000018199) #30 Wnt11 (ENSNGAG00000013425) #31 ENSNGAG00000013016 #32 Emsy (ENSNGAG00000013674) #33 Lrrc32 (ENSNGAG00000010300) #34 Gucy2d (ENSNGAG00000020383) Tsku (ENSNGAG00000015490) #35 Acer3 (ENSNGAG00000018623) #36 B3gnt6 (ENSNGAG00000014322) #37 Muroidea_A ANCESTRAL SPECIES ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01070000253969 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Cricetidae ANCESTRAL SPECIES 1 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01070000253969 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877.d #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Cricetidae_B ANCESTRAL SPECIES 26 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01070000253969 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877.d #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Prairie vole MODERN SPECIES 9 P4ha3 (ENSMOCG00000019829) #8 Pgm2l1 (ENSMOCG00000003706) #9 Kcne3 (ENSMOCG00000003845) #10 Lipt2 (ENSMOCG00000017385) #11 Pold3 (ENSMOCG00000018619) Chrdl2 (ENSMOCG00000010273) #13 Rnf169 (ENSMOCG00000005688) #14 Xrra1 (ENSMOCG00000008479) #15 Spcs2 (ENSMOCG00000013765) #16 Neu3 (ENSMOCG00000015363) #17 Or2at1 (ENSMOCG00000008347) Or2at4 (ENSMOCG00000007737) #18 Slco2b1 (ENSMOCG00000022164) #19 Tpbgl (ENSMOCG00000009503) #20 Arrb1 (ENSMOCG00000013364) #21 Rps3 (ENSMOCG00000007699) #22 Klhl35 (ENSMOCG00000012414) #24 ENSMOCG00000014147 Serpinh1 (ENSMOCG00000015514) #26 Map6 (ENSMOCG00000021641) #27 Mogat2 (ENSMOCG00000007716) #28 Dgat2 (ENSMOCG00000012378) #29 Uvrag (ENSMOCG00000016758) #30 Wnt11 (ENSMOCG00000021029) #31 Thap12 (ENSMOCG00000021908) #32 Emsy (ENSMOCG00000008098) #33 Lrrc32 (ENSMOCG00000017378) #34 Gucy2d (ENSMOCG00000003117) Tsku (ENSMOCG00000007489) #35 Acer3 (ENSMOCG00000014380) #36 B3gnt6 (ENSMOCG00000010357) #37 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES ENSPEMG00000021679 Pgm2l1 (ENSPEMG00000021465) #9 Kcne3 (ENSPEMG00000024743) #10 Lipt2 (ENSPEMG00000009699) #11 Pold3 (ENSPEMG00000016686) Chrdl2 (ENSPEMG00000000436) #13 Rnf169 (ENSPEMG00000009722) #14 Xrra1 (ENSPEMG00000022936) #15 Spcs2 (ENSPEMG00000021621) #16 Neu3 (ENSPEMG00000022579) #17 Or2at1 (ENSPEMG00000001658) Or2at4 (ENSPEMG00000023224) #18 Slco2b1 (ENSPEMG00000022027) #19 Arrb1 (ENSPEMG00000024170) #21 ENSPEMG00000027335 Rps3 (ENSPEMG00000021741) #22 Klhl35 (ENSPEMG00000022958) #24 Gdpd5 (ENSPEMG00000021717) #25 Serpinh1 (ENSPEMG00000022342) #26 Map6 (ENSPEMG00000007984) #27 Mogat2 (ENSPEMG00000023232) #28 Dgat2 (ENSPEMG00000021889) #29 Uvrag (ENSPEMG00000028043) #30 Wnt11 (ENSPEMG00000021569) #31 Thap12 (ENSPEMG00000013204) #32 Emsy (ENSPEMG00000023648) #33 Lrrc32 (ENSPEMG00000024699) #34 ENSPEMG00000026314 ENSPEMG00000028876 ENSPEMG00000024681 Tsku (ENSPEMG00000028771) #35 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES ENSPEMG00000024469 Mkrn3 (ENSPEMG00000009895) Magel2 (ENSPEMG00000025417) Ndn (ENSPEMG00000001158) ENSPEMG00000026068 ENSPEMG00000000510 ENSPEMG00000019573 ENSPEMG00000025848 ENSPEMG00000028866 ENSPEMG00000029784 ENSPEMG00000024562 ENSPEMG00000027816 ENSPEMG00000027080 ENSPEMG00000025968 Mrgprx1 (ENSPEMG00000007777) ENSPEMG00000022426 #22 ENSPEMG00000021299 Ptpn5 (ENSPEMG00000022553) Tmem86a (ENSPEMG00000024287) ENSPEMG00000023153 ENSPEMG00000021660 Misfa (ENSPEMG00000021845) Uevld (ENSPEMG00000012328) ENSPEMG00000022662 ENSPEMG00000022031 ENSPEMG00000011562 ENSPEMG00000013216 ENSPEMG00000028549 ENSPEMG00000019594 ENSPEMG00000028728 Luzp2 (ENSPEMG00000019695) Northern American deer mouse MODERN SPECIES 10 ENSPEMG00000024670 ENSPEMG00000028339 Chsy3 (ENSPEMG00000010192) Minar2 (ENSPEMG00000024423) Adamts19 (ENSPEMG00000015969) Isoc1 (ENSPEMG00000000429) Slc27a6 (ENSPEMG00000011111) Fbn2 (ENSPEMG00000007637) Slc12a2 (ENSPEMG00000014358) Ccdc192 (ENSPEMG00000017831) Ctxn3 (ENSPEMG00000030766) ENSPEMG00000026741 Prrc1 (ENSPEMG00000009474) Megf10 (ENSPEMG00000014062) C330018D20Rik (ENSPEMG00000024261) ENSPEMG00000030304 #22 Marchf3 (ENSPEMG00000001664) Lmnb1 (ENSPEMG00000021049) Tex43 (ENSPEMG00000029586) Phax (ENSPEMG00000011173) Aldh7a1 (ENSPEMG00000005818) Gramd3 (ENSPEMG00000000293) ENSPEMG00000027705 Zfp608 (ENSPEMG00000009185) Csnk1g3 (ENSPEMG00000019782) Cep120 (ENSPEMG00000009773) Prdm6 (ENSPEMG00000019671) Ppic (ENSPEMG00000019562) Snx24 (ENSPEMG00000019816) Snx2 (ENSPEMG00000019987) Sncaip (ENSPEMG00000013269) Cricetinae ANCESTRAL SPECIES 15 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01070000253969 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.g ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877.d #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 101 P4ha3 (ENSCGRG00001020549) #8 Pgm2l1 (ENSCGRG00001022200) #9 Kcne3 (ENSCGRG00001006190) #10 Lipt2 (ENSCGRG00001003966) #11 Pold3 (ENSCGRG00001024887) Chrdl2 (ENSCGRG00001017085) #13 Xrra1 (ENSCGRG00001021284) #15 ENSCGRG00001018251 #16 Neu3 (ENSCGRG00001022920) #17 ENSCGRG00001009618 ENSCGRG00001008790 Or2at4 (ENSCGRG00001009746) #18 Slco2b1 (ENSCGRG00001015456) #19 Tpbgl (ENSCGRG00001007068) #20 Arrb1 (ENSCGRG00001007148) #21 ENSCGRG00001013667 #22 Klhl35 (ENSCGRG00001005839) #24 Gdpd5 (ENSCGRG00001018824) #25 Serpinh1 (ENSCGRG00001024167) #26 Map6 (ENSCGRG00001012636) #27 Mogat2 (ENSCGRG00001004764) #28 Dgat2 (ENSCGRG00001020895) #29 Uvrag (ENSCGRG00001006874) #30 Wnt11 (ENSCGRG00001022788) #31 Thap12 (ENSCGRG00001021774) #32 ENSCGRG00001019331 #33 Lrrc32 (ENSCGRG00001007026) #34 Gucy2d (ENSCGRG00001012034) Tsku (ENSCGRG00001012773) #35 ENSCGRG00001024060 Acer3 (ENSCGRG00001013571) #36 Chinese hamster chok1gshd MODERN SPECIES 153 Atg12 (ENSCGRG00001012075) Ap3s1 (ENSCGRG00001000186) Lvrn (ENSCGRG00001020459) ENSCGRG00001000319 Commd10 (ENSCGRG00001017628) Sema6a (ENSCGRG00001021091) Dtwd2 (ENSCGRG00001012992) Dmxl1 (ENSCGRG00001022767) ENSCGRG00001020576 Tnfaip8 (ENSCGRG00001016982) Hsd17b4 (ENSCGRG00001017147) ENSCGRG00001010196 Fam170a (ENSCGRG00001022824) ENSCGRG00001007454 Pudp (ENSCGRG00001004277) ENSCGRG00001003744 #22 Prr16 (ENSCGRG00001005826) ENSCGRG00001012009 Ftmt (ENSCGRG00001006087) Srfbp1 (ENSCGRG00001000718) Lox (ENSCGRG00001014607) Zfp474 (ENSCGRG00001002746) 1700034E13Rik (ENSCGRG00001001918) Gykl1 (ENSCGRG00001001492) Sncaip (ENSCGRG00001013058) ENSCGRG00001023240 Snx24 (ENSCGRG00001011694) Ppic (ENSCGRG00001008818) Prdm6 (ENSCGRG00001016821) Cep120 (ENSCGRG00001017499) Csnk1g3 (ENSCGRG00001024465) Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 634 Pou4f3 (ENSMAUG00000004271) Tcerg1 (ENSMAUG00000001246) Gpr151 (ENSMAUG00000017885) Ppp2r2b (ENSMAUG00000000540) Stk32a (ENSMAUG00000000298) Dpysl3 (ENSMAUG00000004068) Jakmip2 (ENSMAUG00000019544) Spink1 (ENSMAUG00000012128) Scgb3a2 (ENSMAUG00000011964) Gm94 (ENSMAUG00000010983) Spink5 (ENSMAUG00000008656) Spink14 (ENSMAUG00000005950) Spink6 (ENSMAUG00000017716) Spink12 (ENSMAUG00000017393) Gm37797 (ENSMAUG00000016122) ENSMAUG00000015088 #22 Gm10267 (ENSMAUG00000014573) Npy6r (ENSMAUG00000017787) Myot (ENSMAUG00000014226) Dcp2 (ENSMAUG00000013325) Mcc (ENSMAUG00000019507) Ythdc2 (ENSMAUG00000016179) Kcnn2 (ENSMAUG00000013907) Trim36 (ENSMAUG00000017118) Pggt1b (ENSMAUG00000016267) Ccdc112 (ENSMAUG00000013957) Fem1c (ENSMAUG00000013678) ENSMAUG00000012918 ENSMAUG00000017914 Tmed7 (ENSMAUG00000000849) ENSMAUG00000019719 Golden Hamster MODERN SPECIES 627 Tom1l2 (ENSMAUG00000022049) Srebf1 (ENSMAUG00000015988) Rai1 (ENSMAUG00000001278) Pemt (ENSMAUG00000020085) Rasd1 (ENSMAUG00000020548) Med9 (ENSMAUG00000013247) ENSMAUG00000010388 Nt5m (ENSMAUG00000017068) Cops3 (ENSMAUG00000017378) Flcn (ENSMAUG00000017523) Pld6 (ENSMAUG00000013977) ENSMAUG00000015837 Or2w25 (ENSMAUG00000020886) Or2b11 (ENSMAUG00000010476) Nlrp3 (ENSMAUG00000020051) ENSMAUG00000006329 #22 ENSMAUG00000017910 Zkscan17 (ENSMAUG00000016630) ENSMAUG00000019046 Jmjd4 (ENSMAUG00000017265) Snap47 (ENSMAUG00000020014) Prss38 (ENSMAUG00000019978) Wnt9a (ENSMAUG00000021643) Wnt3a (ENSMAUG00000021475) ENSMAUG00000022253 2310033P09Rik (ENSMAUG00000019958) Guk1 (ENSMAUG00000022283) Gjc2 (ENSMAUG00000020150) Iba57 (ENSMAUG00000020575) Obscn (ENSMAUG00000022279) Trim11 (ENSMAUG00000001510) Golden Hamster MODERN SPECIES 660 Ppme1 (ENSMAUG00000010412) #7 P4ha3 (ENSMAUG00000018103) #8 Pgm2l1 (ENSMAUG00000017167) #9 Kcne3 (ENSMAUG00000011451) #10 Lipt2 (ENSMAUG00000019457) #11 ENSMAUG00000014499 Chrdl2 (ENSMAUG00000017187) #13 Rnf169 (ENSMAUG00000014501) #14 Xrra1 (ENSMAUG00000021020) #15 Spcs2 (ENSMAUG00000011785) #16 Neu3 (ENSMAUG00000021349) #17 Or2at1 (ENSMAUG00000001599) ENSMAUG00000017960 #19 Tpbgl (ENSMAUG00000008440) #20 Arrb1 (ENSMAUG00000021854) #21 ENSMAUG00000012031 #22 Klhl35 (ENSMAUG00000021872) #24 ENSMAUG00000015100 Serpinh1 (ENSMAUG00000019515) #26 Map6 (ENSMAUG00000011744) #27 Mogat2 (ENSMAUG00000012718) #28 Dgat2 (ENSMAUG00000009895) #29 Uvrag (ENSMAUG00000022039) #30 Wnt11 (ENSMAUG00000008427) #31 Thap12 (ENSMAUG00000000897) #32 ENSMAUG00000013228 Emsy (ENSMAUG00000017757) #33 ENSMAUG00000017794 #34 Gucy2d (ENSMAUG00000010563) Tsku (ENSMAUG00000014311) #35 Acer3 (ENSMAUG00000021627) #36 Murinae ANCESTRAL SPECIES ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01070000253969 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Rat MODERN SPECIES 13 Fastkd1 (ENSRNOG00000024335) Klhl41 (ENSRNOG00000007461) Bbs5 (ENSRNOG00000007127) Lrp2 (ENSRNOG00000056184) Dhrs9 (ENSRNOG00000065735) Abcb11 (ENSRNOG00000050860) AABR07052465.1 (ENSRNOG00000050620) Spc25 (ENSRNOG00000006731) Nostrin (ENSRNOG00000006611) Cers6 (ENSRNOG00000024595) Eif5-ps1 (ENSRNOG00000065729) LOC685184 (ENSRNOG00000062489) Stk39 (ENSRNOG00000024808) B3galt1 (ENSRNOG00000007625) Xirp2 (ENSRNOG00000034258) RGD1560831 (ENSRNOG00000007605) #22 Scn7a (ENSRNOG00000029342) Scn9a (ENSRNOG00000006639) LOC108350387 (ENSRNOG00000066633) Scn1a (ENSRNOG00000053122) Ttc21b (ENSRNOG00000005868) Galnt3 (ENSRNOG00000005727) Csrnp3 (ENSRNOG00000005359) Scn2a (ENSRNOG00000005018) Scn3a (ENSRNOG00000005007) Slc38a11 (ENSRNOG00000004966) Cobll1 (ENSRNOG00000027016) Grb14 (ENSRNOG00000052498) ENSRNOG00000071011 Fign (ENSRNOG00000004679) Kcnh7 (ENSRNOG00000007528) Mus ANCESTRAL SPECIES ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01070000253969 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Shrew mouse MODERN SPECIES P4ha3 (MGP_PahariEiJ_G0013265) #8 Pgm2l1 (MGP_PahariEiJ_G0013264) #9 Kcne3 (MGP_PahariEiJ_G0013263) #10 Lipt2 (MGP_PahariEiJ_G0013262) #11 Pold3 (MGP_PahariEiJ_G0013261) Chrdl2 (MGP_PahariEiJ_G0013260) #13 Rnf169 (MGP_PahariEiJ_G0013259) #14 Xrra1 (MGP_PahariEiJ_G0013258) #15 Spcs2 (MGP_PahariEiJ_G0013257) #16 Neu3 (MGP_PahariEiJ_G0013256) #17 MGP_PahariEiJ_G0013255 Or2at4 (MGP_PahariEiJ_G0013254) #18 Slco2b1 (MGP_PahariEiJ_G0013253) #19 Tpbgl (MGP_PahariEiJ_G0013252) #20 Arrb1 (MGP_PahariEiJ_G0013251) #21 Rps3 (MGP_PahariEiJ_G0013250) #22 Klhl35 (MGP_PahariEiJ_G0013249) #24 Gdpd5 (MGP_PahariEiJ_G0013248) #25 Serpinh1 (MGP_PahariEiJ_G0013247) #26 Map6 (MGP_PahariEiJ_G0013246) #27 Mogat2 (MGP_PahariEiJ_G0013245) #28 Dgat2 (MGP_PahariEiJ_G0013244) #29 Uvrag (MGP_PahariEiJ_G0013243) #30 Wnt11 (MGP_PahariEiJ_G0013242) #31 Thap12 (MGP_PahariEiJ_G0013241) #32 Emsy (MGP_PahariEiJ_G0013240) #33 Lrrc32 (MGP_PahariEiJ_G0013239) #34 Gucy2d (MGP_PahariEiJ_G0013238) Tsku (MGP_PahariEiJ_G0013237) #35 Acer3 (MGP_PahariEiJ_G0013236) #36 B3gnt6 (MGP_PahariEiJ_G0013235) #37 Mus_A ANCESTRAL SPECIES 1 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01070000253969 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Ryukyu mouse MODERN SPECIES 16 Ppme1 (MGP_CAROLIEiJ_G0030044) #7 P4ha3 (MGP_CAROLIEiJ_G0030043) #8 Pgm2l1 (MGP_CAROLIEiJ_G0030042) #9 Kcne3 (MGP_CAROLIEiJ_G0030041) #10 Lipt2 (MGP_CAROLIEiJ_G0030040) #11 Pold3 (MGP_CAROLIEiJ_G0030039) Chrdl2 (MGP_CAROLIEiJ_G0030038) #13 Rnf169 (MGP_CAROLIEiJ_G0030037) #14 Xrra1 (MGP_CAROLIEiJ_G0030036) #15 Spcs2 (MGP_CAROLIEiJ_G0030035) #16 MGP_CAROLIEiJ_G0030034 #18 MGP_CAROLIEiJ_G0030033 #18 Slco2b1 (MGP_CAROLIEiJ_G0030032) #19 Tpbgl (MGP_CAROLIEiJ_G0030031) #20 Arrb1 (MGP_CAROLIEiJ_G0030030) #21 Rps3 (MGP_CAROLIEiJ_G0030029) #22 Klhl35 (MGP_CAROLIEiJ_G0030028) #24 Gdpd5 (MGP_CAROLIEiJ_G0030027) #25 Serpinh1 (MGP_CAROLIEiJ_G0030026) #26 Map6 (MGP_CAROLIEiJ_G0030025) #27 Mogat2 (MGP_CAROLIEiJ_G0030024) #28 MGP_CAROLIEiJ_G0030023 #29 Uvrag (MGP_CAROLIEiJ_G0030022) #30 Wnt11 (MGP_CAROLIEiJ_G0030021) #31 Thap12 (MGP_CAROLIEiJ_G0030020) #32 Emsy (MGP_CAROLIEiJ_G0030019) #33 Lrrc32 (MGP_CAROLIEiJ_G0030018) #34 Gucy2d (MGP_CAROLIEiJ_G0030017) Tsku (MGP_CAROLIEiJ_G0030016) #35 Acer3 (MGP_CAROLIEiJ_G0030015) #36 B3gnt6 (MGP_CAROLIEiJ_G0030014) #37 Mus_B ANCESTRAL SPECIES ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01070000253969 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Mouse MODERN SPECIES 16 P4ha3 (ENSMUSG00000051048) #8 Pgm2l1 (ENSMUSG00000030729) #9 Kcne3 (ENSMUSG00000035165) #10 Lipt2 (ENSMUSG00000030725) #11 Pold3 (ENSMUSG00000030726) Chrdl2 (ENSMUSG00000030732) #13 Rnf169 (ENSMUSG00000058761) #14 Xrra1 (ENSMUSG00000035211) #15 Spcs2 (ENSMUSG00000035227) #16 Neu3 (ENSMUSG00000035239) #17 Or2at1 (ENSMUSG00000073997) Or2at4 (ENSMUSG00000073998) #18 Slco2b1 (ENSMUSG00000030737) #19 Tpbgl (ENSMUSG00000096606) #20 Arrb1 (ENSMUSG00000018909) #21 Rps3 (ENSMUSG00000030744) #22 Klhl35 (ENSMUSG00000035298) #24 Gdpd5 (ENSMUSG00000035314) #25 Serpinh1 (ENSMUSG00000070436) #26 Map6 (ENSMUSG00000055407) #27 Mogat2 (ENSMUSG00000052396) #28 Dgat2 (ENSMUSG00000030747) #29 Uvrag (ENSMUSG00000035354) #30 Wnt11 (ENSMUSG00000015957) #31 Thap12 (ENSMUSG00000030753) #32 Emsy (ENSMUSG00000035401) #33 Lrrc32 (ENSMUSG00000090958) #34 Gucy2d (ENSMUSG00000074003) Tsku (ENSMUSG00000049580) #35 Acer3 (ENSMUSG00000030760) #36 B3gnt6 (ENSMUSG00000074004) #37 Mus_C ANCESTRAL SPECIES 13 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01070000253969 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Steppe mouse MODERN SPECIES 3349 Lipt2 (ENSMSIG00000027742) #11 Pold3 (ENSMSIG00000027730) ENSMSIG00000027727 Chrdl2 (ENSMSIG00000027712) #13 Rnf169 (ENSMSIG00000027708) #14 Xrra1 (ENSMSIG00000027684) #15 Spcs2 (ENSMSIG00000027625) #16 Neu3 (ENSMSIG00000027608) #17 ENSMSIG00000027598 ENSMSIG00000027596 Or2at1 (ENSMSIG00000027584) Or2at4 (ENSMSIG00000027555) #18 Slco2b1 (ENSMSIG00000027516) #19 Tpbgl (ENSMSIG00000027507) #20 ENSMSIG00000027402 #21 Rps3 (ENSMSIG00000027343) #22 Klhl35 (ENSMSIG00000027326) #24 Gdpd5 (ENSMSIG00000027274) #25 Serpinh1 (ENSMSIG00000027236) #26 Map6 (ENSMSIG00000027203) #27 ENSMSIG00000027198 Mogat2 (ENSMSIG00000027187) #28 Dgat2 (ENSMSIG00000027153) #29 Uvrag (ENSMSIG00000027125) #30 Wnt11 (ENSMSIG00000027102) #31 Thap12 (ENSMSIG00000027087) #32 Emsy (ENSMSIG00000026804) #33 ENSMSIG00000026793 Lrrc32 (ENSMSIG00000026734) #34 Gucy2d (ENSMSIG00000026666) ENSMSIG00000026660 spretus MODERN SPECIES 16 P4ha3 (MGP_SPRETEiJ_G0031154) #8 Pgm2l1 (MGP_SPRETEiJ_G0031153) #9 Kcne3 (MGP_SPRETEiJ_G0031152) #10 Lipt2 (MGP_SPRETEiJ_G0031151) #11 Pold3 (MGP_SPRETEiJ_G0031150) Chrdl2 (MGP_SPRETEiJ_G0031149) #13 Rnf169 (MGP_SPRETEiJ_G0031148) #14 Xrra1 (MGP_SPRETEiJ_G0031147) #15 Spcs2 (MGP_SPRETEiJ_G0031146) #16 Neu3 (MGP_SPRETEiJ_G0031145) #17 MGP_SPRETEiJ_G0031144 #18 MGP_SPRETEiJ_G0031143 #18 Slco2b1 (MGP_SPRETEiJ_G0031142) #19 Tpbgl (MGP_SPRETEiJ_G0031141) #20 Arrb1 (MGP_SPRETEiJ_G0031140) #21 Rps3 (MGP_SPRETEiJ_G0031139) #22 Klhl35 (MGP_SPRETEiJ_G0031138) #24 Gdpd5 (MGP_SPRETEiJ_G0031137) #25 Serpinh1 (MGP_SPRETEiJ_G0031136) #26 Map6 (MGP_SPRETEiJ_G0031135) #27 Mogat2 (MGP_SPRETEiJ_G0031134) #28 Dgat2 (MGP_SPRETEiJ_G0031133) #29 Uvrag (MGP_SPRETEiJ_G0031132) #30 Wnt11 (MGP_SPRETEiJ_G0031131) #31 MGP_SPRETEiJ_G0031130 ##32 Emsy (MGP_SPRETEiJ_G0031129) #33 Lrrc32 (MGP_SPRETEiJ_G0031128) #34 Gucy2d (MGP_SPRETEiJ_G0031127) Tsku (MGP_SPRETEiJ_G0031126) #35 Acer3 (MGP_SPRETEiJ_G0031125) #36 B3gnt6 (MGP_SPRETEiJ_G0031124) #37 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 59 Ppme1 (ENSJJAG00000007410) #7 P4ha3 (ENSJJAG00000020207) #8 Pgm2l1 (ENSJJAG00000022120) #9 Kcne3 (ENSJJAG00000020890) #10 ENSJJAG00000023707 Lipt2 (ENSJJAG00000017301) #11 Pold3 (ENSJJAG00000017773) Chrdl2 (ENSJJAG00000016161) #13 Rnf169 (ENSJJAG00000011953) #14 Xrra1 (ENSJJAG00000008569) #15 Spcs2 (ENSJJAG00000021065) #16 Neu3 (ENSJJAG00000017819) #17 ENSJJAG00000021660 #19 Tpbgl (ENSJJAG00000010465) #20 Arrb1 (ENSJJAG00000004361) #21 Rps3 (ENSJJAG00000018981) #22 Klhl35 (ENSJJAG00000013370) #24 ENSJJAG00000007355 Serpinh1 (ENSJJAG00000023536) #26 Map6 (ENSJJAG00000014715) #27 Mogat2 (ENSJJAG00000023310) #28 Dgat2 (ENSJJAG00000019379) #29 Uvrag (ENSJJAG00000004695) #30 Wnt11 (ENSJJAG00000014979) #31 ENSJJAG00000013737 #32 Emsy (ENSJJAG00000022026) #33 Lrrc32 (ENSJJAG00000000443) #34 ENSJJAG00000022648 Tsku (ENSJJAG00000012703) #35 Acer3 (ENSJJAG00000016119) #36 Capn5 (ENSJJAG00000021999) Lesser Egyptian jerboa MODERN SPECIES 44 Smoc2 (ENSJJAG00000009559) Dact2 (ENSJJAG00000006451) ENSJJAG00000015043 ENSJJAG00000011658 Afdn (ENSJJAG00000011148) ENSJJAG00000020398 Cep43 (ENSJJAG00000024342) ENSJJAG00000013485 Rps6ka2 (ENSJJAG00000005765) ENSJJAG00000020707 ENSJJAG00000023581 ENSJJAG00000022568 Pde10a (ENSJJAG00000010428) ENSJJAG00000005686 ENSJJAG00000010987 ENSJJAG00000017023 #22 Pabpc6 (ENSJJAG00000019230) Qki (ENSJJAG00000022765) Pacrg (ENSJJAG00000013819) ENSJJAG00000022340 Prkn (ENSJJAG00000011282) Agpat4 (ENSJJAG00000024380) ENSJJAG00000017984 ENSJJAG00000016960 Plg (ENSJJAG00000023805) Slc22a3 (ENSJJAG00000015842) Slc22a2 (ENSJJAG00000020676) Slc22a1 (ENSJJAG00000017119) Igf2r (ENSJJAG00000019554) Mas1 (ENSJJAG00000011567) Pnldc1 (ENSJJAG00000009937) Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 392 ENSDORG00000023722 ENSDORG00000009251 ENSDORG00000028388 ENSDORG00000028021 Stx19 (ENSDORG00000024286) Arl13b (ENSDORG00000006144) Pros1 (ENSDORG00000023647) Epha3 (ENSDORG00000003956) 4930453N24Rik (ENSDORG00000023462) Zfp654 (ENSDORG00000010609) Cggbp1 (ENSDORG00000024826) Htr1f (ENSDORG00000009973) Pou1f1 (ENSDORG00000016030) Chmp2b (ENSDORG00000016032) Vgll3 (ENSDORG00000012784) ENSDORG00000025518 #22 Cadm2 (ENSDORG00000001291) Gbe1 (ENSDORG00000012473) Kangaroo rat MODERN SPECIES 341 Ppme1 (ENSDORG00000011061) #7 P4ha3 (ENSDORG00000011067) #8 Pgm2l1 (ENSDORG00000001675) #9 Kcne3 (ENSDORG00000028654) #10 Lipt2 (ENSDORG00000015519) #11 ENSDORG00000008335 #12 Chrdl2 (ENSDORG00000005504) #13 Rnf169 (ENSDORG00000009674) #14 Xrra1 (ENSDORG00000009675) #15 Spcs2 (ENSDORG00000009679) #16 Neu3 (ENSDORG00000023952) #17 Or2at1 (ENSDORG00000002748) Or2at4 (ENSDORG00000023720) #18 ENSDORG00000006523 #19 Arrb1 (ENSDORG00000004398) #21 Rps3 (ENSDORG00000002974) #22 Klhl35 (ENSDORG00000002975) #24 ENSDORG00000002976 ENSDORG00000002978 #26 ENSDORG00000025798 #27 Dgat2 (ENSDORG00000015911) #29 Uvrag (ENSDORG00000015912) #30 Wnt11 (ENSDORG00000005892) #31 ENSDORG00000030214 #32 Emsy (ENSDORG00000008129) #33 Lrrc32 (ENSDORG00000027997) #34 ENSDORG00000028416 Tsku (ENSDORG00000005661) #35 Capn5 (ENSDORG00000014952) Myo7a (ENSDORG00000014955) Pak1 (ENSDORG00000015484) Rodentia_A ANCESTRAL SPECIES 1 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00530000063516.a.a.d ##32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 Hystricomorpha ANCESTRAL SPECIES 5 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Naked mole-rat female MODERN SPECIES 24 ENSHGLG00000021193 CHRDL2 (ENSHGLG00000013117) #13 RNF169 (ENSHGLG00000047439) #14 ENSHGLG00000038136 #15 ENSHGLG00000004932 #15 SPCS2 (ENSHGLG00000044953) #16 ENSHGLG00000042609 NEU3 (ENSHGLG00000018397) #17 ENSHGLG00000032512 ENSHGLG00000039039 ENSHGLG00000033098 OR2AT4 (ENSHGLG00000049134) #18 SLCO2B1 (ENSHGLG00000015264) #19 TPBGL (ENSHGLG00000021318) #20 ARRB1 (ENSHGLG00000015558) #21 RPS3 (ENSHGLG00000019339) #22 KLHL35 (ENSHGLG00000004947) #24 GDPD5 (ENSHGLG00000009912) #25 SERPINH1 (ENSHGLG00000007288) #26 MAP6 (ENSHGLG00000005485) #27 ENSHGLG00000043050 MOGAT2 (ENSHGLG00000005337) #28 DGAT2 (ENSHGLG00000003971) #29 ENSHGLG00000039982 UVRAG (ENSHGLG00000003077) #30 WNT11 (ENSHGLG00000010701) #31 THAP12 (ENSHGLG00000043567) #32 GVQW3 (ENSHGLG00000047967) EMSY (ENSHGLG00000006473) #33 LRRC32 (ENSHGLG00000019111) #34 ENSHGLG00000019386 Hystricomorpha_a ANCESTRAL SPECIES 10 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Guinea pig MODERN SPECIES 103 PPME1 (ENSCPOG00000003599) #7 P4HA3 (ENSCPOG00000003601) #8 PGM2L1 (ENSCPOG00000014068) #9 KCNE3 (ENSCPOG00000033408) #10 LIPT2 (ENSCPOG00000025073) #11 ENSCPOG00000007066 CHRDL2 (ENSCPOG00000007071) #13 RNF169 (ENSCPOG00000025687) #14 XRRA1 (ENSCPOG00000007269) #15 SPCS2 (ENSCPOG00000033774) #16 NEU3 (ENSCPOG00000006422) #17 OR2AT4 (ENSCPOG00000012056) #18 SLCO2B1 (ENSCPOG00000015052) #19 TPBGL (ENSCPOG00000015056) #20 ARRB1 (ENSCPOG00000000209) #21 RPS3 (ENSCPOG00000004665) #22 KLHL35 (ENSCPOG00000010232) #24 GDPD5 (ENSCPOG00000010246) #25 SERPINH1 (ENSCPOG00000022994) #26 ENSCPOG00000031687 #27 Hystricomorpha_b ANCESTRAL SPECIES 5 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000163174 #37 Long-tailed chinchilla MODERN SPECIES 121 C2CD3 (ENSCLAG00000015900) PPME1 (ENSCLAG00000016482) #7 P4HA3 (ENSCLAG00000016260) #8 PGM2L1 (ENSCLAG00000015758) #9 KCNE3 (ENSCLAG00000016222) #10 LIPT2 (ENSCLAG00000016419) #11 ENSCLAG00000014255 #12 CHRDL2 (ENSCLAG00000016930) #13 RNF169 (ENSCLAG00000015974) #14 XRRA1 (ENSCLAG00000014397) #15 SPCS2 (ENSCLAG00000016410) #16 NEU3 (ENSCLAG00000015476) #17 SLCO2B1 (ENSCLAG00000013902) #19 TPBGL (ENSCLAG00000016335) #20 ARRB1 (ENSCLAG00000014486) #21 RPS3 (ENSCLAG00000013819) #22 KLHL35 (ENSCLAG00000015297) #24 GDPD5 (ENSCLAG00000015415) #25 SERPINH1 (ENSCLAG00000013718) #26 ENSCLAG00000015204 #27 DGAT2 (ENSCLAG00000015138) #29 UVRAG (ENSCLAG00000016075) #30 WNT11 (ENSCLAG00000014333) #31 THAP12 (ENSCLAG00000014847) #32 EMSY (ENSCLAG00000015699) #33 LRRC32 (ENSCLAG00000016535) #34 ENSCLAG00000014932 TSKU (ENSCLAG00000016143) #35 ENSCLAG00000015013 ACER3 (ENSCLAG00000014899) #36 B3GNT6 (ENSCLAG00000018076) #37 Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 287 VIP (ENSODEG00000002006) MYCT1 (ENSODEG00000001986) SYNE1 (ENSODEG00000001363) ESR1 (ENSODEG00000001036) ENSODEG00000000997 CCDC170 (ENSODEG00000000921) ENSODEG00000001305 #22 ENSODEG00000001273 ENSODEG00000001262 RMND1 (ENSODEG00000001174) ZBTB2 (ENSODEG00000001142) ENSODEG00000018687 MTHFD1L (ENSODEG00000001602) PLEKHG1 (ENSODEG00000001446) ENSODEG00000018708 IYD (ENSODEG00000001311) PPP1R14C (ENSODEG00000001211) Degu MODERN SPECIES 109 LAMB1 (ENSODEG00000000690) DLD (ENSODEG00000000733) ENSODEG00000000746 ENSODEG00000000753 SLC26A3 (ENSODEG00000000813) ENSODEG00000001115 ENSODEG00000018679 SLC26A4 (ENSODEG00000001172) ENSODEG00000001457 DUS4L (ENSODEG00000001582) COG5 (ENSODEG00000001169) ENSODEG00000001284 GPR22 (ENSODEG00000001302) ENSODEG00000001327 PRKAR2B (ENSODEG00000001356) ENSODEG00000001789 #22 ENSODEG00000001816 ENSODEG00000001876 CCDC71L (ENSODEG00000001887) ENSODEG00000001918 SYPL1 (ENSODEG00000001969) CDHR3 (ENSODEG00000002812) ENSODEG00000002991 ATXN7L1 (ENSODEG00000003212) EFCAB10 (ENSODEG00000003310) RINT1 (ENSODEG00000003415) PUS7 (ENSODEG00000001435) ENSODEG00000018663 ENSODEG00000001524 ENSODEG00000002016 ENSODEG00000002095 Degu MODERN SPECIES 295 ENSODEG00000002819 RAB7A (ENSODEG00000002835) ENSODEG00000002857 RPN1 (ENSODEG00000002872) GATA2 (ENSODEG00000002888) DNAJB8 (ENSODEG00000018895) EEFSEC (ENSODEG00000002928) RUVBL1 (ENSODEG00000003323) SEC61A1 (ENSODEG00000003340) KBTBD12 (ENSODEG00000003397) MGLL (ENSODEG00000003434) ENSODEG00000003742 #22 ABTB1 (ENSODEG00000003795) PODXL2 (ENSODEG00000003875) MCM2 (ENSODEG00000003959) TPRA1 (ENSODEG00000002274) PLXNA1 (ENSODEG00000002675) ENSODEG00000002815 ENSODEG00000018745 ENSODEG00000001312 TXNRD3 (ENSODEG00000001387) ENSODEG00000001498 TMEM43 (ENSODEG00000001624) XPC (ENSODEG00000001699) LSM3 (ENSODEG00000001726) ENSODEG00000001738 GRIP2 (ENSODEG00000001787) Degu MODERN SPECIES 92 TRIM13 (ENSODEG00000005624) ENSODEG00000006101 ENSODEG00000005796 ENSODEG00000006427 EBPL (ENSODEG00000006022) RCBTB1 (ENSODEG00000009239) SETDB2 (ENSODEG00000005653) CAB39L (ENSODEG00000005405) CDADC1 (ENSODEG00000005355) MLNR (ENSODEG00000005947) ENSODEG00000019344 FNDC3A (ENSODEG00000005882) ENSODEG00000005498 CYSLTR2 (ENSODEG00000005345) ENSODEG00000019363 ENSODEG00000006804 #22 RCBTB2 (ENSODEG00000007840) LPAR6 (ENSODEG00000019536) RB1 (ENSODEG00000007075) ENSODEG00000005765 ENSODEG00000006829 NUDT15 (ENSODEG00000006598) ENSODEG00000006404 ENSODEG00000005873 ENSODEG00000019388 ENSODEG00000005886 HTR2A (ENSODEG00000005410) ENSODEG00000005173 LRCH1 (ENSODEG00000005209) RUBCNL (ENSODEG00000006136) ENSODEG00000006039 Degu DUPLICATION Degu MODERN SPECIES 109 ENSODEG00000018900 PCDH10 (ENSODEG00000003197) ENSODEG00000003065 C4orf33 (ENSODEG00000003048) SCLT1 (ENSODEG00000002596) JADE1 (ENSODEG00000002559) ENSODEG00000002537 #22 ENSODEG00000002522 ENSODEG00000002509 ENSODEG00000002382 ENSODEG00000002367 ENSODEG00000001334 ENSODEG00000001292 ABHD18 (ENSODEG00000001060) MFSD8 (ENSODEG00000000927) ENSODEG00000000892 PLK4 (ENSODEG00000000625) ENSODEG00000000579 ENSODEG00000000559 ENSODEG00000000469 ORC5 (ENSODEG00000000381) LHFPL3 (ENSODEG00000002390) Degu MODERN SPECIES 229 HMCN1 (ENSODEG00000000838) ENSODEG00000000957 TPR (ENSODEG00000000889) ENSODEG00000000804 PDC (ENSODEG00000000764) PTGS2 (ENSODEG00000000729) PLA2G4A (ENSODEG00000000676) ENSODEG00000000640 #22 BRINP3 (ENSODEG00000000619) Degu MODERN SPECIES 90 LIPT2 (ENSODEG00000004972) #11 ENSODEG00000019096 ENSODEG00000004965 POLD3 (ENSODEG00000004735) CHRDL2 (ENSODEG00000004877) #13 RNF169 (ENSODEG00000004854) #14 XRRA1 (ENSODEG00000004727) #15 SPCS2 (ENSODEG00000004684) #16 NEU3 (ENSODEG00000004614) #17 ENSODEG00000019165 ENSODEG00000004518 OR2AT4 (ENSODEG00000004509) #18 SLCO2B1 (ENSODEG00000004779) #19 TPBGL (ENSODEG00000004759) #20 ARRB1 (ENSODEG00000004633) #21 ENSODEG00000004564 #22 KLHL35 (ENSODEG00000004522) #24 ENSODEG00000004513 SERPINH1 (ENSODEG00000004317) #26 ENSODEG00000004327 #27 MOGAT2 (ENSODEG00000004302) #28 DGAT2 (ENSODEG00000004293) #29 UVRAG (ENSODEG00000004147) #30 WNT11 (ENSODEG00000003887) #31 ENSODEG00000003873 ##32 EMSY (ENSODEG00000003710) #33 LRRC32 (ENSODEG00000008307) #34 ENSODEG00000008288 TSKU (ENSODEG00000019557) #35 Sciuridae ANCESTRAL SPECIES 2 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00530000063516.a.a.d ##32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 Marmotini ANCESTRAL SPECIES 28 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00390000009895.i.b.a ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00530000063516.a.a.d ##32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 Alpin marmot MODERN SPECIES 3 C2CD3 (ENSMMMG00000010449) PPME1 (ENSMMMG00000010421) #7 P4HA3 (ENSMMMG00000010398) #8 ENSMMMG00000010391 PGM2L1 (ENSMMMG00000010377) #9 KCNE3 (ENSMMMG00000010356) #10 ENSMMMG00000010334 #12 CHRDL2 (ENSMMMG00000010297) #13 ENSMMMG00000010292 RNF169 (ENSMMMG00000010273) #14 XRRA1 (ENSMMMG00000010212) #15 SPCS2 (ENSMMMG00000010185) #16 NEU3 (ENSMMMG00000010144) #17 SLCO2B1 (ENSMMMG00000010020) #19 ARRB1 (ENSMMMG00000009891) #21 RPS3 (ENSMMMG00000009823) #22 GDPD5 (ENSMMMG00000009761) #25 SERPINH1 (ENSMMMG00000009745) #26 MAP6 (ENSMMMG00000009732) #27 MOGAT2 (ENSMMMG00000009708) #28 DGAT2 (ENSMMMG00000009694) #29 UVRAG (ENSMMMG00000009669) #30 WNT11 (ENSMMMG00000009631) #31 GVQW3 (ENSMMMG00000009582) EMSY (ENSMMMG00000009455) #33 LRRC32 (ENSMMMG00000009408) #34 ENSMMMG00000009326 TSKU (ENSMMMG00000009316) #35 ACER3 (ENSMMMG00000009260) #36 B3GNT6 (ENSMMMG00000009247) #37 CAPN5 (ENSMMMG00000009202) Marmotini_b ANCESTRAL SPECIES 13 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00390000009895.i.b.a ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.t #32 ENSGT00530000063516.a.a.d ##32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 48 CHRDL2 (ENSUPAG00010013837) #13 ENSUPAG00010013830 RNF169 (ENSUPAG00010013817) #14 XRRA1 (ENSUPAG00010013791) #15 ENSUPAG00010013754 #16 ENSUPAG00010013749 OR2AT4 (ENSUPAG00010013744) #18 SLCO2B1 (ENSUPAG00010013587) #19 TPBGL (ENSUPAG00010013579) #20 ARRB1 (ENSUPAG00010013533) #21 RPS3 (ENSUPAG00010013480) #22 KLHL35 (ENSUPAG00010013466) #24 GDPD5 (ENSUPAG00010013418) #25 SERPINH1 (ENSUPAG00010013397) #26 ENSUPAG00010013392 ENSUPAG00010013378 #27 MOGAT2 (ENSUPAG00010013360) #28 DGAT2 (ENSUPAG00010013352) #29 UVRAG (ENSUPAG00010013333) #30 WNT11 (ENSUPAG00010013326) #31 THAP12 (ENSUPAG00010013320) #32 ENSUPAG00010013311 ##32 GVQW3 (ENSUPAG00010013303) EMSY (ENSUPAG00010013019) #33 ENSUPAG00010013002 LRRC32 (ENSUPAG00010012993) #34 Arctic ground squirrel MODERN SPECIES 165 ENSUPAG00010000844 ENSUPAG00010000834 #22 LRRTM1 (ENSUPAG00010000825) CTNNA2 (ENSUPAG00010000499) ENSUPAG00010000280 REG1A (ENSUPAG00010000234) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 1 P2RY14 (ENSSVLG00005007959) GPR87 (ENSSVLG00005007934) P2RY13 (ENSSVLG00005007907) P2RY12 (ENSSVLG00005007889) MED12L (ENSSVLG00005007792) IGSF10 (ENSSVLG00005007686) AADAC (ENSSVLG00005007632) SUCNR1 (ENSSVLG00005007593) MBNL1 (ENSSVLG00005007413) ENSSVLG00005007281 P2RY1 (ENSSVLG00005007265) RAP2B (ENSSVLG00005007246) ARHGEF26 (ENSSVLG00005007133) DHX36 (ENSSVLG00005007041) GPR149 (ENSSVLG00005006960) ENSSVLG00005006949 #22 MME (ENSSVLG00005006865) STRIT1 (ENSSVLG00005006829) PLCH1 (ENSSVLG00005006514) ENSSVLG00005006455 C3orf33 (ENSSVLG00005006407) SLC33A1 (ENSSVLG00005006332) GMPS (ENSSVLG00005006221) ENSSVLG00005006157 KCNAB1 (ENSSVLG00005005761) ENSSVLG00005005598 TIPARP (ENSSVLG00005005579) LEKR1 (ENSSVLG00005005558) CCNL1 (ENSSVLG00005005434) ENSSVLG00005005378 PTX3 (ENSSVLG00005005353) Eurasian red squirrel MODERN SPECIES 11 ENSSVLG00005008292 BCL2A1 (ENSSVLG00005008264) MTHFS (ENSSVLG00005008240) MINAR1 (ENSSVLG00005008210) TMED3 (ENSSVLG00005008188) ANKRD34C (ENSSVLG00005008176) ENSSVLG00005008153 RASGRF1 (ENSSVLG00005007962) CTSH (ENSSVLG00005007841) MORF4L1 (ENSSVLG00005007603) ADAMTS7 (ENSSVLG00005007537) TBC1D2B (ENSSVLG00005007497) SH2D7 (ENSSVLG00005007466) CIB2 (ENSSVLG00005007403) ENSSVLG00005007289 ENSSVLG00005007245 #22 ENSSVLG00005007234 ACSBG1 (ENSSVLG00005007166) DNAJA4 (ENSSVLG00005007123) SKIC8 (ENSSVLG00005007085) CRABP1 (ENSSVLG00005007052) IREB2 (ENSSVLG00005007016) HYKK (ENSSVLG00005006951) PSMA4 (ENSSVLG00005006789) CHRNA5 (ENSSVLG00005006742) CHRNA3 (ENSSVLG00005006641) CHRNB4 (ENSSVLG00005006614) ENSSVLG00005006463 FBXO22 (ENSSVLG00005006425) NRG4 (ENSSVLG00005006386) TMEM266 (ENSSVLG00005006361) Eurasian red squirrel MODERN SPECIES 156 ENSSVLG00005022283 ENSSVLG00005022267 ENSSVLG00005022247 ENSSVLG00005022204 ENSSVLG00005022167 ENSSVLG00005022130 ENSSVLG00005022080 ENSSVLG00005022061 ENSSVLG00005022025 ENSSVLG00005022009 ENSSVLG00005021992 ENSSVLG00005021975 SPIN4 (ENSSVLG00005021964) ARHGEF9 (ENSSVLG00005021404) ENSSVLG00005021257 ENSSVLG00005021158 #22 AMER1 (ENSSVLG00005021139) ENSSVLG00005021103 MTMR8 (ENSSVLG00005020958) ENSSVLG00005020905 ENSSVLG00005020783 ZC4H2 (ENSSVLG00005020732) ENSSVLG00005020704 ENSSVLG00005020675 ENSSVLG00005020634 ZC3H12B (ENSSVLG00005020578) ENSSVLG00005020314 ENSSVLG00005020269 MSN (ENSSVLG00005020199) ENSSVLG00005020160 ENSSVLG00005020115 Eurasian red squirrel MODERN SPECIES 2 ENSSVLG00005020056 ENSSVLG00005020086 ENSSVLG00005020230 ENSSVLG00005020246 ENSSVLG00005020262 CHRDL2 (ENSSVLG00005020306) #13 ENSSVLG00005020360 XRRA1 (ENSSVLG00005020739) #15 ENSSVLG00005021124 #16 ENSSVLG00005021188 ENSSVLG00005021281 OR2AT4 (ENSSVLG00005021320) #18 SLCO2B1 (ENSSVLG00005021400) #19 TPBGL (ENSSVLG00005021827) #20 ENSSVLG00005021867 #21 ENSSVLG00005022121 #22 KLHL35 (ENSSVLG00005022223) #24 GDPD5 (ENSSVLG00005022336) #25 SERPINH1 (ENSSVLG00005022497) #26 MAP6 (ENSSVLG00005022557) #27 MOGAT2 (ENSSVLG00005022595) #28 DGAT2 (ENSSVLG00005022688) #29 UVRAG (ENSSVLG00005022785) #30 WNT11 (ENSSVLG00005022863) #31 THAP12 (ENSSVLG00005022917) #32 GVQW3 (ENSSVLG00005022970) EMSY (ENSSVLG00005023093) #33 LRRC32 (ENSSVLG00005023371) #34 ENSSVLG00005023498 ENSSVLG00005023846 TSKU (ENSSVLG00005023871) #35 Eurasian red squirrel MODERN SPECIES 16 NMBR (ENSSVLG00005018755) GJE1 (ENSSVLG00005018719) VTA1 (ENSSVLG00005018530) ADGRG6 (ENSSVLG00005017461) HIVEP2 (ENSSVLG00005017320) AIG1 (ENSSVLG00005017202) ADAT2 (ENSSVLG00005017149) PEX3 (ENSSVLG00005017100) FUCA2 (ENSSVLG00005017059) PHACTR2 (ENSSVLG00005016689) LTV1 (ENSSVLG00005016622) ZC2HC1B (ENSSVLG00005016528) PLAGL1 (ENSSVLG00005016506) SF3B5 (ENSSVLG00005016490) STX11 (ENSSVLG00005016470) ENSSVLG00005016411 #22 UTRN (ENSSVLG00005016150) EPM2A (ENSSVLG00005016024) FBXO30 (ENSSVLG00005016005) SHPRH (ENSSVLG00005015321) ENSSVLG00005015257 GRM1 (ENSSVLG00005015002) ENSSVLG00005014957 ADGB (ENSSVLG00005014586) STXBP5 (ENSSVLG00005014456) SAMD5 (ENSSVLG00005014384) ENSSVLG00005014345 SASH1 (ENSSVLG00005014292) UST (ENSSVLG00005014236) ENSSVLG00005014219 TAB2 (ENSSVLG00005014149) Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00910000147753 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00910000147753 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00910000147753 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Laurasiatheria_c ANCESTRAL SPECIES 9 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Equus ANCESTRAL SPECIES 15 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Donkey MODERN SPECIES 12 KCNE3 (ENSEASG00005038189) #10 LIPT2 (ENSEASG00005017860) #11 ENSEASG00005017856 #12 CHRDL2 (ENSEASG00005017832) #13 RNF169 (ENSEASG00005038773) #14 XRRA1 (ENSEASG00005017820) #15 ENSEASG00005017816 #16 NEU3 (ENSEASG00005017815) #17 ENSEASG00005017814 OR2AT4 (ENSEASG00005014267) #18 ENSEASG00005036702 ENSEASG00005035225 SLCO2B1 (ENSEASG00005014263) #19 TPBGL (ENSEASG00005025170) #20 ARRB1 (ENSEASG00005014253) #21 RPS3 (ENSEASG00005014248) #22 KLHL35 (ENSEASG00005014246) #24 GDPD5 (ENSEASG00005014243) #25 SERPINH1 (ENSEASG00005014240) #26 MAP6 (ENSEASG00005014238) #27 MOGAT2 (ENSEASG00005014230) #28 ENSEASG00005014228 #29 UVRAG (ENSEASG00005014226) #30 WNT11 (ENSEASG00005014224) #31 THAP12 (ENSEASG00005014222) #32 GVQW3 (ENSEASG00005026325) EMSY (ENSEASG00005014219) #33 LRRC32 (ENSEASG00005014217) #34 ENSEASG00005014216 TSKU (ENSEASG00005028507) #35 ENSEASG00005037031 #36 Horse DUPLICATION Horse MODERN SPECIES 28 PPME1 (ENSECAG00000010756) #7 P4HA3 (ENSECAG00000006917) #8 PGM2L1 (ENSECAG00000018803) #9 KCNE3 (ENSECAG00000007379) #10 LIPT2 (ENSECAG00000017517) #11 POLD3 (ENSECAG00000012624) CHRDL2 (ENSECAG00000011897) #13 RNF169 (ENSECAG00000010781) #14 XRRA1 (ENSECAG00000007758) #15 SPCS2 (ENSECAG00000007179) #16 NEU3 (ENSECAG00000006601) #17 ENSECAG00000059146 TPBGL (ENSECAG00000059109) #20 SLCO2B1 (ENSECAG00000024423) #19 ARRB1 (ENSECAG00000017459) #21 RPS3 (ENSECAG00000013915) #22 KLHL35 (ENSECAG00000013664) #24 GDPD5 (ENSECAG00000010098) #25 SERPINH1 (ENSECAG00000004871) #26 MAP6 (ENSECAG00000004615) #27 MOGAT2 (ENSECAG00000025135) #28 DGAT2 (ENSECAG00000024847) #29 ENSECAG00000058058 ENSECAG00000018259 UVRAG (ENSECAG00000023818) #30 WNT11 (ENSECAG00000022188) #31 THAP12 (ENSECAG00000021982) #32 GVQW3 (ENSECAG00000046273) EMSY (ENSECAG00000020064) #33 LRRC32 (ENSECAG00000019895) #34 ENSECAG00000038312 Horse MODERN SPECIES 27 STAT2 (ENSECAG00000022326) TIMELESS (ENSECAG00000002892) MIP (ENSECAG00000008856) SPRYD4 (ENSECAG00000008889) GLS2 (ENSECAG00000008933) RBMS2 (ENSECAG00000013470) BAZ2A (ENSECAG00000018243) ATP5F1B (ENSECAG00000022627) PTGES3 (ENSECAG00000013127) ENSECAG00000015242 ENSECAG00000015297 HSD17B6 (ENSECAG00000016761) ENSECAG00000050633 ENSECAG00000036993 ENSECAG00000051324 ENSECAG00000031430 #22 ENSECAG00000029773 SDR9C7 (ENSECAG00000018703) ENSECAG00000038236 ENSECAG00000028933 ENSECAG00000048525 GPR182 (ENSECAG00000049899) ZBTB39 (ENSECAG00000006101) ENSECAG00000035776 MYO1A (ENSECAG00000021228) NEMP1 (ENSECAG00000023977) NAB2 (ENSECAG00000006453) STAT6 (ENSECAG00000008705) LRP1 (ENSECAG00000012166) NXPH4 (ENSECAG00000006133) SHMT2 (ENSECAG00000021295) Chiroptera ANCESTRAL SPECIES 5 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Megabat MODERN SPECIES 788 ARRB1 (ENSPVAG00000011267) #21 RPS3 (ENSPVAG00000011271) #22 KLHL35 (ENSPVAG00000011274) #24 GDPD5 (ENSPVAG00000011275) #25 SERPINH1 (ENSPVAG00000011278) #26 MAP6 (ENSPVAG00000011280) #27 MOGAT2 (ENSPVAG00000011283) #28 DGAT2 (ENSPVAG00000011285) #29 UVRAG (ENSPVAG00000011287) #30 WNT11 (ENSPVAG00000011291) #31 Microchiroptera ANCESTRAL SPECIES 2 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Greater horseshoe bat MODERN SPECIES 2 LIPT2 (ENSRFEG00010016489) #11 POLD3 (ENSRFEG00010016519) ENSRFEG00010016605 CHRDL2 (ENSRFEG00010016638) #13 RNF169 (ENSRFEG00010016892) #14 XRRA1 (ENSRFEG00010016995) #15 SPCS2 (ENSRFEG00010017525) #16 NEU3 (ENSRFEG00010017632) #17 ENSRFEG00010017649 #18 ENSRFEG00010017695 #18 ENSRFEG00010017708 ENSRFEG00010017732 SLCO2B1 (ENSRFEG00010017798) #19 TPBGL (ENSRFEG00010018053) #20 ARRB1 (ENSRFEG00010018085) #21 RPS3 (ENSRFEG00010018171) #22 KLHL35 (ENSRFEG00010018271) #24 GDPD5 (ENSRFEG00010018359) #25 SERPINH1 (ENSRFEG00010018606) #26 MAP6 (ENSRFEG00010018658) #27 MOGAT2 (ENSRFEG00010018707) #28 DGAT2 (ENSRFEG00010018775) #29 UVRAG (ENSRFEG00010018929) #30 ENSRFEG00010019042 ENSRFEG00010019083 WNT11 (ENSRFEG00010019130) #31 THAP12 (ENSRFEG00010019170) #32 GVQW3 (ENSRFEG00010019199) EMSY (ENSRFEG00010019268) #33 LRRC32 (ENSRFEG00010019506) #34 TSKU (ENSRFEG00010019575) #35 Microbat DUPLICATION Microbat DUPLICATION Microbat MODERN SPECIES 1429 ENSMLUG00000015843 ENSMLUG00000026956 #22 Microbat MODERN SPECIES 1999 ENSMLUG00000025123 #22 Microbat MODERN SPECIES 1373 TPBGL (ENSMLUG00000008995) #20 ARRB1 (ENSMLUG00000028342) #21 ENSMLUG00000028728 RPS3 (ENSMLUG00000004079) #22 KLHL35 (ENSMLUG00000004083) #24 GDPD5 (ENSMLUG00000004089) #25 SERPINH1 (ENSMLUG00000004105) #26 MAP6 (ENSMLUG00000004112) #27 MOGAT2 (ENSMLUG00000001572) #28 ENSMLUG00000024749 ENSMLUG00000025797 DGAT2 (ENSMLUG00000017447) #29 ENSMLUG00000025262 UVRAG (ENSMLUG00000017450) #30 Carnivora ANCESTRAL SPECIES 21 ENSGT00910000147753 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Felidae ANCESTRAL SPECIES ENSGT00910000147753 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Panthera ANCESTRAL SPECIES 23 ENSGT00910000147753 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Tiger MODERN SPECIES 152 UCP3 (ENSPTIG00000010500) C2CD3 (ENSPTIG00000006117) PPME1 (ENSPTIG00000019950) #7 P4HA3 (ENSPTIG00000019317) #8 ENSPTIG00000006901 PGM2L1 (ENSPTIG00000018629) #9 KCNE3 (ENSPTIG00000006865) #10 POLD3 (ENSPTIG00000016047) CHRDL2 (ENSPTIG00000013187) #13 RNF169 (ENSPTIG00000012006) #14 XRRA1 (ENSPTIG00000006459) #15 SPCS2 (ENSPTIG00000002921) #16 NEU3 (ENSPTIG00000019876) #17 SLCO2B1 (ENSPTIG00000017944) #19 ARRB1 (ENSPTIG00000016095) #21 RPS3 (ENSPTIG00000012777) #22 ENSPTIG00000012295 #24 GDPD5 (ENSPTIG00000008012) #25 ENSPTIG00000007424 #26 ENSPTIG00000007135 #27 MOGAT2 (ENSPTIG00000005726) #28 DGAT2 (ENSPTIG00000021220) #29 ENSPTIG00000020523 #30 Panthera_a ANCESTRAL SPECIES 24 ENSGT00910000147753 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 lion DUPLICATION lion MODERN SPECIES 6 THAP10 (ENSPLOG00000004291) LRRC49 (ENSPLOG00000004239) THSD4 (ENSPLOG00000004187) NR2E3 (ENSPLOG00000004121) MYO9A (ENSPLOG00000004099) SENP8 (ENSPLOG00000004081) GRAMD2A (ENSPLOG00000004063) PKM (ENSPLOG00000004017) PARP6 (ENSPLOG00000003979) CELF6 (ENSPLOG00000003887) HEXA (ENSPLOG00000003841) TMEM202 (ENSPLOG00000003823) ARIH1 (ENSPLOG00000003791) BBS4 (ENSPLOG00000003760) ADPGK (ENSPLOG00000003737) ENSPLOG00000003714 #22 NEO1 (ENSPLOG00000003569) HCN4 (ENSPLOG00000003478) REC114 (ENSPLOG00000003447) NPTN (ENSPLOG00000003402) ENSPLOG00000003377 INSYN1 (ENSPLOG00000003366) TBC1D21 (ENSPLOG00000003301) LOXL1 (ENSPLOG00000003247) STOML1 (ENSPLOG00000003202) PML (ENSPLOG00000003050) ISLR2 (ENSPLOG00000002981) ISLR (ENSPLOG00000002968) ENSPLOG00000002950 CCDC33 (ENSPLOG00000002847) CYP11A1 (ENSPLOG00000002791) lion MODERN SPECIES 10 PGM2L1 (ENSPLOG00000007360) #9 ENSPLOG00000007335 KCNE3 (ENSPLOG00000007327) #10 LIPT2 (ENSPLOG00000007304) #11 POLD3 (ENSPLOG00000007284) CHRDL2 (ENSPLOG00000007211) #13 RNF169 (ENSPLOG00000007163) #14 XRRA1 (ENSPLOG00000007091) #15 SPCS2 (ENSPLOG00000006952) #16 NEU3 (ENSPLOG00000006924) #17 ENSPLOG00000006910 OR2AT4 (ENSPLOG00000006896) #18 SLCO2B1 (ENSPLOG00000006678) #19 TPBGL (ENSPLOG00000006600) #20 ARRB1 (ENSPLOG00000006514) #21 RPS3 (ENSPLOG00000006386) #22 KLHL35 (ENSPLOG00000006330) #24 GDPD5 (ENSPLOG00000006203) #25 SERPINH1 (ENSPLOG00000006124) #26 MAP6 (ENSPLOG00000006086) #27 MOGAT2 (ENSPLOG00000006057) #28 DGAT2 (ENSPLOG00000005990) #29 UVRAG (ENSPLOG00000005912) #30 WNT11 (ENSPLOG00000005866) #31 THAP12 (ENSPLOG00000005843) #32 GVQW3 (ENSPLOG00000005758) EMSY (ENSPLOG00000005554) #33 LRRC32 (ENSPLOG00000005396) #34 ENSPLOG00000005376 ENSPLOG00000005358 ENSPLOG00000005339 leopard DUPLICATION leopard MODERN SPECIES 7 LRRC49 (ENSPPRG00000023003) THSD4 (ENSPPRG00000022730) NR2E3 (ENSPPRG00000000927) ENSPPRG00000001103 MYO9A (ENSPPRG00000007767) SENP8 (ENSPPRG00000016555) GRAMD2A (ENSPPRG00000008327) PKM (ENSPPRG00000012428) PARP6 (ENSPPRG00000013821) CELF6 (ENSPPRG00000021783) HEXA (ENSPPRG00000024022) TMEM202 (ENSPPRG00000023583) ARIH1 (ENSPPRG00000023431) BBS4 (ENSPPRG00000023101) ADPGK (ENSPPRG00000022888) ENSPPRG00000000760 #22 NEO1 (ENSPPRG00000001880) HCN4 (ENSPPRG00000002940) REC114 (ENSPPRG00000003630) NPTN (ENSPPRG00000005655) CD276 (ENSPPRG00000007120) INSYN1 (ENSPPRG00000007414) TBC1D21 (ENSPPRG00000007945) LOXL1 (ENSPPRG00000008323) STOML1 (ENSPPRG00000009831) PML (ENSPPRG00000014030) ISLR (ENSPPRG00000017470) STRA6 (ENSPPRG00000022892) CCDC33 (ENSPPRG00000001398) CYP11A1 (ENSPPRG00000001983) SEMA7A (ENSPPRG00000003868) leopard MODERN SPECIES 17 ENSPPRG00000019390 PGM2L1 (ENSPPRG00000012685) #9 ENSPPRG00000019374 KCNE3 (ENSPPRG00000019344) #10 LIPT2 (ENSPPRG00000012003) #11 POLD3 (ENSPPRG00000011534) CHRDL2 (ENSPPRG00000009765) #13 RNF169 (ENSPPRG00000008146) #14 XRRA1 (ENSPPRG00000007628) #15 SPCS2 (ENSPPRG00000005824) #16 NEU3 (ENSPPRG00000004096) #17 ENSPPRG00000018979 SLCO2B1 (ENSPPRG00000002453) #19 TPBGL (ENSPPRG00000001225) #20 ARRB1 (ENSPPRG00000000797) #21 RPS3 (ENSPPRG00000021200) #22 KLHL35 (ENSPPRG00000016187) #24 GDPD5 (ENSPPRG00000014276) #25 SERPINH1 (ENSPPRG00000010542) #26 ENSPPRG00000010162 #27 MOGAT2 (ENSPPRG00000009822) #28 DGAT2 (ENSPPRG00000009451) #29 UVRAG (ENSPPRG00000007658) #30 WNT11 (ENSPPRG00000006331) #31 THAP12 (ENSPPRG00000005378) #32 GVQW3 (ENSPPRG00000018362) EMSY (ENSPPRG00000004765) #33 LRRC32 (ENSPPRG00000014260) #34 ENSPPRG00000013613 ENSPPRG00000012568 TSKU (ENSPPRG00000017969) #35 Cat DUPLICATION Cat MODERN SPECIES 237 LRRC49 (ENSFCAG00000025525) THSD4 (ENSFCAG00000010030) NR2E3 (ENSFCAG00000031082) MYO9A (ENSFCAG00000023404) SENP8 (ENSFCAG00000000650) GRAMD2A (ENSFCAG00000000651) ENSFCAG00000000653 ENSFCAG00000001853 PARP6 (ENSFCAG00000028393) CELF6 (ENSFCAG00000016249) HEXA (ENSFCAG00000022167) TMEM202 (ENSFCAG00000000656) ARIH1 (ENSFCAG00000018568) BBS4 (ENSFCAG00000031015) ADPGK (ENSFCAG00000012250) ENSFCAG00000029480 #22 NEO1 (ENSFCAG00000005224) HCN4 (ENSFCAG00000005227) REC114 (ENSFCAG00000007426) NPTN (ENSFCAG00000006343) CD276 (ENSFCAG00000006344) INSYN1 (ENSFCAG00000037097) TBC1D21 (ENSFCAG00000003096) LOXL1 (ENSFCAG00000011546) STOML1 (ENSFCAG00000022450) PML (ENSFCAG00000003098) ISLR2 (ENSFCAG00000034171) ISLR (ENSFCAG00000028071) STRA6 (ENSFCAG00000010865) CCDC33 (ENSFCAG00000010868) CYP11A1 (ENSFCAG00000010871) Cat MODERN SPECIES 241 P4HA3 (ENSFCAG00000007938) #8 PGM2L1 (ENSFCAG00000007942) #9 ENSFCAG00000025621 KCNE3 (ENSFCAG00000007946) #10 LIPT2 (ENSFCAG00000005135) #11 POLD3 (ENSFCAG00000008169) CHRDL2 (ENSFCAG00000008172) #13 RNF169 (ENSFCAG00000043917) #14 XRRA1 (ENSFCAG00000014638) #15 SPCS2 (ENSFCAG00000022532) #16 NEU3 (ENSFCAG00000033977) #17 ENSFCAG00000036568 OR2AT4 (ENSFCAG00000029673) #18 SLCO2B1 (ENSFCAG00000011940) #19 ARRB1 (ENSFCAG00000011941) #21 RPS3 (ENSFCAG00000011942) #22 KLHL35 (ENSFCAG00000012545) #24 GDPD5 (ENSFCAG00000011943) #25 SERPINH1 (ENSFCAG00000011944) #26 MAP6 (ENSFCAG00000023444) #27 MOGAT2 (ENSFCAG00000004632) #28 DGAT2 (ENSFCAG00000040215) #29 UVRAG (ENSFCAG00000022180) #30 WNT11 (ENSFCAG00000025418) #31 THAP12 (ENSFCAG00000006764) #32 GVQW3 (ENSFCAG00000025300) EMSY (ENSFCAG00000012003) #33 LRRC32 (ENSFCAG00000012007) #34 ENSFCAG00000025549 TSKU (ENSFCAG00000041968) #35 ACER3 (ENSFCAG00000031003) #36 Caniformia ANCESTRAL SPECIES 17 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Canidae ANCESTRAL SPECIES 17 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00550000074832.ab Canis_lupus ANCESTRAL SPECIES 21 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.w ENSGT00940000163113 #18 ENSGT00940000162049.x ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00550000074832.ab Dingo MODERN SPECIES 245 RPS3 (ENSCAFG00020002102) #22 KLHL35 (ENSCAFG00020002093) #24 GDPD5 (ENSCAFG00020002063) #25 SERPINH1 (ENSCAFG00020002046) #26 ENSCAFG00020002018 #27 MOGAT2 (ENSCAFG00020002004) #28 ENSCAFG00020001974 #29 UVRAG (ENSCAFG00020001967) #30 WNT11 (ENSCAFG00020001959) #31 THAP12 (ENSCAFG00020001916) #32 GVQW3 (ENSCAFG00020001914) EMSY (ENSCAFG00020001634) #33 LRRC32 (ENSCAFG00020001532) #34 ENSCAFG00020001515 ENSCAFG00020001492 TSKU (ENSCAFG00020001488) #35 Dog DUPLICATION Dog MODERN SPECIES 23 LRRC49 (ENSCAFG00845022590) THSD4 (ENSCAFG00845022941) NR2E3 (ENSCAFG00845023002) MYO9A (ENSCAFG00845023099) SENP8 (ENSCAFG00845023365) GRAMD2A (ENSCAFG00845023412) PKM (ENSCAFG00845023630) PARP6 (ENSCAFG00845024025) CELF6 (ENSCAFG00845024666) HEXA (ENSCAFG00845025040) ENSCAFG00845025359 ARIH1 (ENSCAFG00845025391) ENSCAFG00845025503 ENSCAFG00845025660 NEO1 (ENSCAFG00845025873) ENSCAFG00845026931 #22 HCN4 (ENSCAFG00845027098) ENSCAFG00845027454 NPTN (ENSCAFG00845027606) CD276 (ENSCAFG00845027858) INSYN1 (ENSCAFG00845028026) TBC1D21 (ENSCAFG00845028109) LOXL1 (ENSCAFG00845028254) STOML1 (ENSCAFG00845028377) PML (ENSCAFG00845028697) ISLR2 (ENSCAFG00845028834) ISLR (ENSCAFG00845028845) STRA6 (ENSCAFG00845028892) CCDC33 (ENSCAFG00845029058) CYP11A1 (ENSCAFG00845029140) SEMA7A (ENSCAFG00845029262) Dog MODERN SPECIES 13 PGM2L1 (ENSCAFG00845006417) #9 KCNE3 (ENSCAFG00845006390) #10 LIPT2 (ENSCAFG00845006375) #11 ENSCAFG00845006319 CHRDL2 (ENSCAFG00845006210) #13 RNF169 (ENSCAFG00845006177) #14 XRRA1 (ENSCAFG00845006118) #15 SPCS2 (ENSCAFG00845006071) #16 NEU3 (ENSCAFG00845006035) #17 OR2AT2 (ENSCAFG00845012453) OR2AT2B (ENSCAFG00845012435) #18 ENSCAFG00845012420 SLCO2B1 (ENSCAFG00845012322) #19 ENSCAFG00845012257 ARRB1 (ENSCAFG00845011997) #21 RPS3 (ENSCAFG00845011844) #22 KLHL35 (ENSCAFG00845011797) #24 GDPD5 (ENSCAFG00845011562) #25 SERPINH1 (ENSCAFG00845011365) #26 MAP6 (ENSCAFG00845011305) #27 MOGAT2 (ENSCAFG00845011232) #28 DGAT2 (ENSCAFG00845011120) #29 UVRAG (ENSCAFG00845010859) #30 WNT11 (ENSCAFG00845010773) #31 THAP12 (ENSCAFG00845010711) #32 GVQW3 (ENSCAFG00845010675) LRRC32 (ENSCAFG00845010636) #34 ENSCAFG00845010608 ENSCAFG00845010588 ENSCAFG00845010554 TSKU (ENSCAFG00845010425) #35 Red fox DUPLICATION Red fox MODERN SPECIES MYO9A (ENSVVUG00000015366) SENP8 (ENSVVUG00000018219) GRAMD2A (ENSVVUG00000018223) PKM (ENSVVUG00000018228) ENSVVUG00000018232 PARP6 (ENSVVUG00000018234) ENSVVUG00000018262 ENSVVUG00000018268 HEXA (ENSVVUG00000018275) TMEM202 (ENSVVUG00000018304) ENSVVUG00000018312 ARIH1 (ENSVVUG00000018321) ENSVVUG00000018350 ADPGK (ENSVVUG00000018412) NEO1 (ENSVVUG00000018428) ENSVVUG00000018431 #22 ENSVVUG00000018434 HCN4 (ENSVVUG00000018438) REC114 (ENSVVUG00000018443) NPTN (ENSVVUG00000018450) ENSVVUG00000018459 CD276 (ENSVVUG00000018466) INSYN1 (ENSVVUG00000018472) TBC1D21 (ENSVVUG00000018482) ENSVVUG00000018485 STOML1 (ENSVVUG00000018494) ENSVVUG00000018496 ISLR2 (ENSVVUG00000018502) ISLR (ENSVVUG00000018503) STRA6 (ENSVVUG00000018509) CCDC33 (ENSVVUG00000018528) Red fox MODERN SPECIES 81 P4HA3 (ENSVVUG00000024443) #8 PGM2L1 (ENSVVUG00000024420) #9 KCNE3 (ENSVVUG00000024415) #10 LIPT2 (ENSVVUG00000024412) #11 POLD3 (ENSVVUG00000024403) CHRDL2 (ENSVVUG00000024393) #13 RNF169 (ENSVVUG00000024386) #14 XRRA1 (ENSVVUG00000024378) #15 SPCS2 (ENSVVUG00000024376) #16 NEU3 (ENSVVUG00000024375) #17 ENSVVUG00000024373 OR2AT4 (ENSVVUG00000024372) #18 ENSVVUG00000024368 SLCO2B1 (ENSVVUG00000024363) #19 ARRB1 (ENSVVUG00000024357) #21 RPS3 (ENSVVUG00000024353) #22 KLHL35 (ENSVVUG00000024352) #24 GDPD5 (ENSVVUG00000024349) #25 SERPINH1 (ENSVVUG00000024343) #26 MAP6 (ENSVVUG00000024341) #27 MOGAT2 (ENSVVUG00000024340) #28 DGAT2 (ENSVVUG00000024339) #29 UVRAG (ENSVVUG00000024337) #30 WNT11 (ENSVVUG00000024336) #31 THAP12 (ENSVVUG00000024332) #32 GVQW3 (ENSVVUG00000024331) EMSY (ENSVVUG00000024307) #33 ENSVVUG00000024300 LRRC32 (ENSVVUG00000024297) #34 ENSVVUG00000024295 ENSVVUG00000024288 Caniformia_b ANCESTRAL SPECIES 3 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Mustelinae ANCESTRAL SPECIES 25 ENSGT00390000004396 #7 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 American mink MODERN SPECIES 6 PPME1 (ENSNVIG00000022146) #7 P4HA3 (ENSNVIG00000022190) #8 PGM2L1 (ENSNVIG00000022233) #9 KCNE3 (ENSNVIG00000022255) #10 LIPT2 (ENSNVIG00000022257) #11 POLD3 (ENSNVIG00000022266) CRDL2 (ENSNVIG00000022284) #13 RNF169 (ENSNVIG00000022325) #14 XRRA1 (ENSNVIG00000022332) #15 SPCS2 (ENSNVIG00000022377) #16 NEU3 (ENSNVIG00000022399) #17 OR2AT4 (ENSNVIG00000022405) #18 SLCO2B1 (ENSNVIG00000022418) #19 TPBGL (ENSNVIG00000022489) #20 ARRB1 (ENSNVIG00000022499) #21 RPS3 (ENSNVIG00000022524) #22 KLHL35 (ENSNVIG00000000027) #24 GDPD5 (ENSNVIG00000000058) #25 SERPINH1 (ENSNVIG00000000240) #26 MAP6 (ENSNVIG00000000278) #27 MOGAT2 (ENSNVIG00000000300) #28 DGAT2 (ENSNVIG00000000310) #29 UVRAG (ENSNVIG00000000349) #30 WNT11 (ENSNVIG00000000391) #31 ENSNVIG00000000416 #32 GVQW3 (ENSNVIG00000000425) EMSY (ENSNVIG00000000431) #33 LRRC32 (ENSNVIG00000000538) #34 ENSNVIG00000000546 ENSNVIG00000000562 ENSNVIG00000000591 Ferret MODERN SPECIES 294 PPME1 (ENSMPUG00000009348) #7 P4HA3 (ENSMPUG00000009330) #8 PGM2L1 (ENSMPUG00000009319) #9 KCNE3 (ENSMPUG00000019533) #10 LIPT2 (ENSMPUG00000009304) #11 POLD3 (ENSMPUG00000009299) CHRDL2 (ENSMPUG00000009291) #13 RNF169 (ENSMPUG00000009279) #14 XRRA1 (ENSMPUG00000009266) #15 SPCS2 (ENSMPUG00000009261) #16 NEU3 (ENSMPUG00000009248) #17 OR2AT4 (ENSMPUG00000019531) #18 SLCO2B1 (ENSMPUG00000009234) #19 TPBGL (ENSMPUG00000019529) #20 ARRB1 (ENSMPUG00000009213) #21 RPS3 (ENSMPUG00000009197) #22 KLHL35 (ENSMPUG00000009085) #24 GDPD5 (ENSMPUG00000009066) #25 SERPINH1 (ENSMPUG00000009062) #26 MAP6 (ENSMPUG00000009054) #27 MOGAT2 (ENSMPUG00000009005) #28 DGAT2 (ENSMPUG00000008926) #29 UVRAG (ENSMPUG00000008808) #30 WNT11 (ENSMPUG00000008789) #31 THAP12 (ENSMPUG00000008784) #32 EMSY (ENSMPUG00000008766) #33 LRRC32 (ENSMPUG00000008762) #34 ENSMPUG00000008573 TSKU (ENSMPUG00000019527) #35 ACER3 (ENSMPUG00000008559) #36 CAPN5 (ENSMPUG00000008549) Ursidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 Ursus ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 American black bear MODERN SPECIES 5370 RPS3 (ENSUAMG00000021546) #22 GDPD5 (ENSUAMG00000021549) #25 Artiodactyla ANCESTRAL SPECIES 1 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Camelidae ANCESTRAL SPECIES 32 ENSGT00390000004396 #7 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT00970000197259 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 Alpaca MODERN SPECIES 5453 RPS3 (ENSVPAG00000011615) #22 KLHL35 (ENSVPAG00000011614) #24 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Pecora ANCESTRAL SPECIES 7 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b.h #28 ENSGT00970000197259 ENSGT01030000234582.e.b.g.b.a.a.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 Percora_a ANCESTRAL SPECIES 6 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01100000263806 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b.h #28 ENSGT00970000197259 ENSGT01030000234582.e.b.g.b.a.a.a.a.b #28 ENSGT01030000234582.e.b.g.b.a.a.b #28 ENSGT01030000234582.e.b.g.a.a #28 ENSGT01030000234582.e.b.g.a.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d Siberian musk deer MODERN SPECIES 1173 P4HA3 (ENSMMSG00000011730) #8 PGM2L1 (ENSMMSG00000011704) #9 KCNE3 (ENSMMSG00000011690) #10 LIPT2 (ENSMMSG00000011677) #11 ENSMMSG00000011605 CHRDL2 (ENSMMSG00000011519) #13 RNF169 (ENSMMSG00000011474) #14 XRRA1 (ENSMMSG00000011230) #15 ENSMMSG00000011190 #16 NEU3 (ENSMMSG00000011174) #17 OR2AT4 (ENSMMSG00000011148) #18 ENSMMSG00000011132 SLCO2B1 (ENSMMSG00000010784) #19 TPBGL (ENSMMSG00000010742) #20 ARRB1 (ENSMMSG00000010638) #21 RPS3 (ENSMMSG00000010456) #22 KLHL35 (ENSMMSG00000010389) #24 GDPD5 (ENSMMSG00000010257) #25 ENSMMSG00000010185 #26 ENSMMSG00000010133 #27 ENSMMSG00000010080 #28 ENSMMSG00000010044 ENSMMSG00000010002 #28 ENSMMSG00000009931 #28 Bovidae ANCESTRAL SPECIES 6 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01100000263806 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b.h #28 ENSGT00970000197259 ENSGT01030000234582.e.b.g.b.a.a.a.a.b #28 ENSGT01030000234582.e.b.g.b.a.a.b #28 ENSGT01030000234582.e.b.g.a.a #28 ENSGT01030000234582.e.b.g.a.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d Bovinae ANCESTRAL SPECIES 26 ENSGT00390000004396 #7 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01100000263806 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b.h #28 ENSGT01030000234582.e.b.g.b.b #28 ENSGT01030000234582.e.b.g.b.a.b #28 ENSGT01030000234582.e.b.g.b.a.a.a.a.a.a #28 ENSGT00390000007473.d ENSGT01030000234582.e.b.g.b.a.a.b #28 ENSGT01030000234582.e.b.g.a.a #28 ENSGT01030000234582.e.b.g.a.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 American bison MODERN SPECIES 3168 NEU3 (ENSBBBG00000022546) #17 ENSBBBG00000022551 OR2AT4 (ENSBBBG00000022555) #18 ENSBBBG00000022561 SLCO2B1 (ENSBBBG00000005968) #19 TPBGL (ENSBBBG00000005974) #20 ARRB1 (ENSBBBG00000022736) #21 RPS3 (ENSBBBG00000022815) #22 ENSBBBG00000022826 #24 GDPD5 (ENSBBBG00000022948) #25 SERPINH1 (ENSBBBG00000022977) #26 MAP6 (ENSBBBG00000023028) #27 ENSBBBG00000023058 #28 ENSBBBG00000023066 #28 ENSBBBG00000023073 #28 ENSBBBG00000023075 #28 ENSBBBG00000023080 ENSBBBG00000006059 #28 ENSBBBG00000006061 ENSBBBG00000023102 ENSBBBG00000023116 #28 ENSBBBG00000023136 #28 DGAT2 (ENSBBBG00000023160) #29 Bos ANCESTRAL SPECIES 25 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01100000263806 ENSGT00940000161241 #13 ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b.h #28 ENSGT01030000234582.e.b.g.b.b #28 ENSGT01030000234582.e.b.g.b.a.b #28 ENSGT01030000234582.e.b.g.b.a.a.a.a.a.a #28 ENSGT00390000007473.d ENSGT01030000234582.e.b.g.b.a.a.b #28 ENSGT01030000234582.e.b.g.a.a #28 ENSGT01030000234582.e.b.g.a.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 Bos_b ANCESTRAL SPECIES 40 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01100000263806 ENSGT00940000161241 #13 ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b.h #28 ENSGT00970000197259 ENSGT01030000234582.e.b.g.b.b #28 ENSGT01030000234582.e.b.g.b.a.a.a.a.b #28 ENSGT01030000234582.e.b.g.b.a.a.b #28 ENSGT01030000234582.e.b.g.a.b #28 ENSGT01030000234582.f.a.b #29 Cow MODERN SPECIES 6 PGM2L1 (ENSBTAG00000000770) #9 KCNE3 (ENSBTAG00000011873) #10 LIPT2 (ENSBTAG00000008227) #11 POLD3 (ENSBTAG00000016869) CHRDL2 (ENSBTAG00000021306) #13 RNF169 (ENSBTAG00000000727) #14 ENSBTAG00000054207 XRRA1 (ENSBTAG00000006610) #15 SPCS2 (ENSBTAG00000006644) #16 NEU3 (ENSBTAG00000025931) #17 OR2AT2C (ENSBTAG00000047344) ENSBTAG00000048088 SLCO2B1 (ENSBTAG00000015596) #19 TPBGL (ENSBTAG00000019622) #20 ARRB1 (ENSBTAG00000020485) #21 RPS3 (ENSBTAG00000005620) #22 KLHL35 (ENSBTAG00000015087) #24 GDPD5 (ENSBTAG00000031777) #25 SERPINH1 (ENSBTAG00000001027) #26 MAP6 (ENSBTAG00000001028) #27 MOGAT2 (ENSBTAG00000049519) #28 ENSBTAG00000053794 ENSBTAG00000047111 #28 ENSBTAG00000017443 #28 ENSBTAG00000015091 #28 ENSBTAG00000052936 MOGAT2 (ENSBTAG00000037483) #28 UVRAG (ENSBTAG00000016355) #30 WNT11 (ENSBTAG00000010820) #31 THAP12 (ENSBTAG00000031609) #32 GVQW3 (ENSBTAG00000052297) Hybrid Bos Indicus MODERN SPECIES 6 PPME1 (ENSBIXG00005028331) #7 P4HA3 (ENSBIXG00005004876) #8 PGM2L1 (ENSBIXG00005028456) #9 KCNE3 (ENSBIXG00005028481) #10 LIPT2 (ENSBIXG00005002463) #11 ENSBIXG00005004912 CHRDL2 (ENSBIXG00005028567) #13 ENSBIXG00005028580 RNF169 (ENSBIXG00005028615) #14 XRRA1 (ENSBIXG00005004977) #15 SPCS2 (ENSBIXG00005002321) #16 NEU3 (ENSBIXG00005028847) #17 SLCO2B1 (ENSBIXG00005028960) #19 TPBGL (ENSBIXG00005005103) #20 ARRB1 (ENSBIXG00005001993) #21 RPS3 (ENSBIXG00005005177) #22 KLHL35 (ENSBIXG00005001838) #24 GDPD5 (ENSBIXG00005029191) #25 SERPINH1 (ENSBIXG00005001605) #26 MAP6 (ENSBIXG00005001586) #27 ENSBIXG00005010753 ENSBIXG00005010772 #28 ENSBIXG00005010874 #28 ENSBIXG00005010894 ENSBIXG00005005811 #28 ENSBIXG00005010939 ENSBIXG00005010950 #28 ENSBIXG00005010977 ENSBIXG00005010986 #28 DGAT2 (ENSBIXG00005011065) #29 WNT11 (ENSBIXG00005011138) #31 Bos_a ANCESTRAL SPECIES 44 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01100000263806 ENSGT00940000161241 #13 ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b.h #28 ENSGT00970000197259 Wild yak MODERN SPECIES 1503 PGM2L1 (ENSBMUG00000003154) #9 KCNE3 (ENSBMUG00000003174) #10 LIPT2 (ENSBMUG00000003209) #11 ENSBMUG00000003228 CHRDL2 (ENSBMUG00000003270) #13 RNF169 (ENSBMUG00000003301) #14 XRRA1 (ENSBMUG00000003408) #15 SPCS2 (ENSBMUG00000003427) #16 NEU3 (ENSBMUG00000003443) #17 ENSBMUG00000003461 OR2AT4 (ENSBMUG00000003471) #18 ENSBMUG00000003483 ENSBMUG00000003492 SLCO2B1 (ENSBMUG00000003583) #19 ARRB1 (ENSBMUG00000003695) #21 RPS3 (ENSBMUG00000003751) #22 KLHL35 (ENSBMUG00000003800) #24 GDPD5 (ENSBMUG00000003936) #25 SERPINH1 (ENSBMUG00000004021) #26 MAP6 (ENSBMUG00000004069) #27 ENSBMUG00000004128 #28 Domestic yak DUPLICATION Domestic yak MODERN SPECIES 4 LIPT2 (ENSBGRG00000024650) #11 ENSBGRG00000024546 CHRDL2 (ENSBGRG00000024469) #13 ENSBGRG00000024433 RNF169 (ENSBGRG00000024385) #14 XRRA1 (ENSBGRG00000024307) #15 SPCS2 (ENSBGRG00000024243) #16 NEU3 (ENSBGRG00000024225) #17 ENSBGRG00000024218 OR2AT4 (ENSBGRG00000024199) #18 ENSBGRG00000024185 ENSBGRG00000024166 SLCO2B1 (ENSBGRG00000023872) #19 TPBGL (ENSBGRG00000023837) #20 ARRB1 (ENSBGRG00000023441) #21 RPS3 (ENSBGRG00000023214) #22 KLHL35 (ENSBGRG00000023155) #24 GDPD5 (ENSBGRG00000022949) #25 SERPINH1 (ENSBGRG00000022881) #26 ENSBGRG00000022851 #27 ENSBGRG00000022776 #28 ENSBGRG00000022758 ENSBGRG00000022742 ENSBGRG00000022520 ENSBGRG00000022491 OR4C12 (ENSBGRG00000022476) ENSBGRG00000022382 ENSBGRG00000022353 ENSBGRG00000022324 ENSBGRG00000022314 ENSBGRG00000022282 Domestic yak MODERN SPECIES 4 TRIM29 (ENSBGRG00000013713) OAF (ENSBGRG00000013639) POU2F3 (ENSBGRG00000013401) TLCD5 (ENSBGRG00000013334) ARHGEF12 (ENSBGRG00000012502) GRIK4 (ENSBGRG00000012244) ENSBGRG00000012217 TBCEL (ENSBGRG00000012161) TECTA (ENSBGRG00000012059) SC5D (ENSBGRG00000011853) SORL1 (ENSBGRG00000011099) ENSBGRG00000011053 UBASH3B (ENSBGRG00000010659) CRTAM (ENSBGRG00000015363) JHY (ENSBGRG00000015236) ENSBGRG00000015174 #22 BSX (ENSBGRG00000015127) ENSBGRG00000015071 HSPA8 (ENSBGRG00000014719) CLMP (ENSBGRG00000014616) GRAMD1B (ENSBGRG00000013095) SCN3B (ENSBGRG00000012965) ZNF202 (ENSBGRG00000012911) ENSBGRG00000012876 SAAL1 (ENSBGRG00000012533) TPH1 (ENSBGRG00000012473) SERGEF (ENSBGRG00000012334) KCNC1 (ENSBGRG00000012223) OTOG (ENSBGRG00000011342) USH1C (ENSBGRG00000010311) ABCC8 (ENSBGRG00000009791) Caprinae ANCESTRAL SPECIES 6 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01100000263806 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b.h #28 ENSGT01030000234582.e.b.g.b.b #28 ENSGT01030000234582.e.b.g.b.a.b #28 ENSGT01030000234582.e.b.g.b.a.a.a.a.a.a #28 ENSGT01030000234582.e.b.g.b.a.a.b #28 ENSGT01030000234582.e.b.g.a.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00390000009554 #33 Goat MODERN SPECIES 6 P4HA3 (ENSCHIG00000021364) #8 PGM2L1 (ENSCHIG00000025872) #9 KCNE3 (ENSCHIG00000004672) #10 ENSCHIG00000008399 LIPT2 (ENSCHIG00000023926) #11 ENSCHIG00000023669 CHRDL2 (ENSCHIG00000015102) #13 RNF169 (ENSCHIG00000006555) #14 XRRA1 (ENSCHIG00000022337) #15 SPCS2 (ENSCHIG00000010577) #16 NEU3 (ENSCHIG00000025082) #17 ENSCHIG00000005983 OR2AT4 (ENSCHIG00000006169) #18 SLCO2B1 (ENSCHIG00000008646) #19 ARRB1 (ENSCHIG00000013620) #21 RPS3 (ENSCHIG00000012342) #22 KLHL35 (ENSCHIG00000024312) #24 GDPD5 (ENSCHIG00000014683) #25 SERPINH1 (ENSCHIG00000002757) #26 MAP6 (ENSCHIG00000023796) #27 ENSCHIG00000022165 #28 ENSCHIG00000016754 #28 ENSCHIG00000017465 #28 ENSCHIG00000016227 #28 ENSCHIG00000025677 #28 ENSCHIG00000015313 #28 DGAT2 (ENSCHIG00000010320) #29 UVRAG (ENSCHIG00000025967) #30 WNT11 (ENSCHIG00000021782) #31 ENSCHIG00000008621 #32 GVQW3 (ENSCHIG00000021697) Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 6 KCNE3 (ENSOARG00020003867) #10 LIPT2 (ENSOARG00020003884) #11 POLD3 (ENSOARG00020003908) CHRDL2 (ENSOARG00020003968) #13 RNF169 (ENSOARG00020004047) #14 XRRA1 (ENSOARG00020004106) #15 SPCS2 (ENSOARG00020004400) #16 NEU3 (ENSOARG00020004457) #17 SLCO2B1 (ENSOARG00020004500) #19 ENSOARG00020004621 OR2AT4 (ENSOARG00020004633) #18 ENSOARG00020004648 ENSOARG00020004670 TPBGL (ENSOARG00020004687) #20 ARRB1 (ENSOARG00020004714) #21 RPS3 (ENSOARG00020004797) #22 KLHL35 (ENSOARG00020004876) #24 GDPD5 (ENSOARG00020004944) #25 ENSOARG00020005102 SERPINH1 (ENSOARG00020005114) #26 MOGAT2 (ENSOARG00020005152) #28 ENSOARG00020005200 #28 ENSOARG00020005275 #28 ENSOARG00020005318 #28 ENSOARG00020005345 #28 ENSOARG00020005412 #28 DGAT2 (ENSOARG00020005462) #29 UVRAG (ENSOARG00020005557) #30 ENSOARG00020005653 ENSOARG00020005727 WNT11 (ENSOARG00020006304) #31 Rambouillet Sheep MODERN SPECIES 10 ACKR2 (ENSOARG00020022667) ENSOARG00020022643 ENSOARG00020022604 CCDC13 (ENSOARG00020022519) HHATL (ENSOARG00020022483) KLHL40 (ENSOARG00020022436) ZBTB47 (ENSOARG00020022405) ENSOARG00020022378 NKTR (ENSOARG00020022338) SS18L2 (ENSOARG00020022299) SEC22C (ENSOARG00020022269) VIPR1 (ENSOARG00020021791) LYZL4 (ENSOARG00020021737) CCK (ENSOARG00020021710) TRAK1 (ENSOARG00020019973) ENSOARG00020019793 #22 ULK4 (ENSOARG00020019556) CTNNB1 (ENSOARG00020019145) ENSOARG00020018961 ENSOARG00020018919 RPL14 (ENSOARG00020018769) ENTPD3 (ENSOARG00020018647) EIF1B (ENSOARG00020018597) MYRIP (ENSOARG00020018291) MOBP (ENSOARG00020018246) RPSA (ENSOARG00020018166) ENSOARG00020018132 SLC25A38 (ENSOARG00020017915) ENSOARG00020017853 CX3CR1 (ENSOARG00020017818) ENSOARG00020017791 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES KCNE3 (ENSCHYG00000003907) #10 LIPT2 (ENSCHYG00000003910) #11 POLD3 (ENSCHYG00000003916) CHRDL2 (ENSCHYG00000003936) #13 RNF169 (ENSCHYG00000003956) #14 XRRA1 (ENSCHYG00000003983) #15 ENSCHYG00000004004 #16 NEU3 (ENSCHYG00000004022) #17 ENSCHYG00000004026 OR2AT4 (ENSCHYG00000004032) #18 ENSCHYG00000004041 ENSCHYG00000004045 SLCO2B1 (ENSCHYG00000004067) #19 TPBGL (ENSCHYG00000004162) #20 ARRB1 (ENSCHYG00000004204) #21 RPS3 (ENSCHYG00000004407) #22 KLHL35 (ENSCHYG00000004438) #24 GDPD5 (ENSCHYG00000004461) #25 SERPINH1 (ENSCHYG00000004527) #26 MAP6 (ENSCHYG00000004581) #27 ENSCHYG00000004593 #28 ENSCHYG00000004657 #28 ENSCHYG00000004681 ENSCHYG00000004687 #28 ENSCHYG00000004698 #28 ENSCHYG00000004707 ENSCHYG00000004726 #28 DGAT2 (ENSCHYG00000004776) #29 UVRAG (ENSCHYG00000004806) #30 WNT11 (ENSCHYG00000004966) #31 THAP12 (ENSCHYG00000004989) #32 Yarkand deer MODERN SPECIES 1323 ENSCHYG00000017066 SCML2 (ENSCHYG00000016775) CDKL5 (ENSCHYG00000016442) RS1 (ENSCHYG00000016355) PPEF1 (ENSCHYG00000016044) ENSCHYG00000015917 ENSCHYG00000015895 PHKA2 (ENSCHYG00000014501) ADGRG2 (ENSCHYG00000025589) ENSCHYG00000025479 ENSCHYG00000025460 MAP3K15 (ENSCHYG00000025350) SH3KBP1 (ENSCHYG00000024812) BCLAF3 (ENSCHYG00000024575) MAP7D2 (ENSCHYG00000024324) ENSCHYG00000024281 #22 EIF1AX (ENSCHYG00000024205) RPS6KA3 (ENSCHYG00000023911) ENSCHYG00000023852 ENSCHYG00000023829 CNKSR2 (ENSCHYG00000023268) KLHL34 (ENSCHYG00000023198) SMPX (ENSCHYG00000023180) MBTPS2 (ENSCHYG00000023135) ENSCHYG00000023111 SMS (ENSCHYG00000022994) PHEX (ENSCHYG00000022869) ENSCHYG00000022855 DDX53 (ENSCHYG00000022828) PTCHD1 (ENSCHYG00000022778) PRDX4 (ENSCHYG00000022660) Cetacea ANCESTRAL SPECIES 4 ENSGT00390000004396 #7 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B.h.b.a #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.bb ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Blue whale MODERN SPECIES 19 PGM2L1 (ENSBMSG00010007245) #9 ENSBMSG00010007235 #10 LIPT2 (ENSBMSG00010007226) #11 POLD3 (ENSBMSG00010007215) CHRDL2 (ENSBMSG00010007185) #13 RNF169 (ENSBMSG00010007157) #14 XRRA1 (ENSBMSG00010007133) #15 ENSBMSG00010007104 #16 NEU3 (ENSBMSG00010007095) #17 ENSBMSG00010007063 ENSBMSG00010007056 SLCO2B1 (ENSBMSG00010006926) #19 TPBGL (ENSBMSG00010006875) #20 ARRB1 (ENSBMSG00010006812) #21 KLHL35 (ENSBMSG00010006735) #24 RPS3 (ENSBMSG00010006696) #22 GDPD5 (ENSBMSG00010006559) #25 SERPINH1 (ENSBMSG00010006487) #26 MAP6 (ENSBMSG00010006468) #27 MOGAT2 (ENSBMSG00010006441) #28 DGAT2 (ENSBMSG00010006424) #29 UVRAG (ENSBMSG00010006403) #30 WNT11 (ENSBMSG00010006371) #31 THAP12 (ENSBMSG00010006359) #32 GVQW3 (ENSBMSG00010006350) EMSY (ENSBMSG00010005898) #33 LRRC32 (ENSBMSG00010005727) #34 ENSBMSG00010005705 TSKU (ENSBMSG00010005685) #35 ACER3 (ENSBMSG00010005659) #36 CAPN5 (ENSBMSG00010005617) Odontoceti ANCESTRAL SPECIES 4 ENSGT00390000004396 #7 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B.h.b.a #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.bb ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01010000227694 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00610000086173.a.b ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 Sperm whale MODERN SPECIES 7 PGM2L1 (ENSPCTG00005014991) #9 KCNE3 (ENSPCTG00005014974) #10 ENSPCTG00005014938 LIPT2 (ENSPCTG00005014884) #11 POLD3 (ENSPCTG00005014767) CHRDL2 (ENSPCTG00005014720) #13 ENSPCTG00005014677 RNF169 (ENSPCTG00005014594) #14 XRRA1 (ENSPCTG00005014504) #15 SPCS2 (ENSPCTG00005014290) #16 NEU3 (ENSPCTG00005014228) #17 ENSPCTG00005014215 SLCO2B1 (ENSPCTG00005013315) #19 TPBGL (ENSPCTG00005013251) #20 ARRB1 (ENSPCTG00005012837) #21 RPS3 (ENSPCTG00005012736) #22 KLHL35 (ENSPCTG00005012608) #24 GDPD5 (ENSPCTG00005012361) #25 SERPINH1 (ENSPCTG00005012284) #26 MAP6 (ENSPCTG00005012178) #27 ENSPCTG00005012145 MOGAT2 (ENSPCTG00005012047) #28 DGAT2 (ENSPCTG00005011874) #29 ENSPCTG00005011854 UVRAG (ENSPCTG00005011757) #30 WNT11 (ENSPCTG00005011701) #31 ENSPCTG00005011685 #32 GVQW3 (ENSPCTG00005011668) EMSY (ENSPCTG00005011180) #33 LRRC32 (ENSPCTG00005011094) #34 TSKU (ENSPCTG00005011078) #35 Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B.h.b.a #10 ENSGT00390000006450 #11 ENSGT01100000263806 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.bb ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01010000227694 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00610000086173.a.b ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 Dolphin MODERN SPECIES 2055 LIPT2 (ENSTTRG00000005752) #11 POLD3 (ENSTTRG00000005758) CHRDL2 (ENSTTRG00000005768) #13 RNF169 (ENSTTRG00000005774) #14 XRRA1 (ENSTTRG00000005818) #15 SPCS2 (ENSTTRG00000005830) #16 NEU3 (ENSTTRG00000005836) #17 SLCO2B1 (ENSTTRG00000005843) #19 ARRB1 (ENSTTRG00000005853) #21 RPS3 (ENSTTRG00000005858) #22 KLHL35 (ENSTTRG00000005860) #24 GDPD5 (ENSTTRG00000005863) #25 Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B.h.b.a #10 ENSGT01000000221138 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.bb ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01010000227694 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00610000086173.a.b ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 Vaquita DUPLICATION Vaquita MODERN SPECIES 19 PGM2L1 (ENSPSNG00000007242) #9 ENSPSNG00000007219 #10 ENSPSNG00000007198 LIPT2 (ENSPSNG00000007174) #11 POLD3 (ENSPSNG00000007123) CHRDL2 (ENSPSNG00000007083) #13 RNF169 (ENSPSNG00000007029) #14 XRRA1 (ENSPSNG00000006930) #15 ENSPSNG00000006830 #16 NEU3 (ENSPSNG00000006794) #17 ENSPSNG00000006780 ENSPSNG00000006768 SLCO2B1 (ENSPSNG00000006578) #19 TPBGL (ENSPSNG00000006486) #20 ARRB1 (ENSPSNG00000006320) #21 RPS3 (ENSPSNG00000006180) #22 KLHL35 (ENSPSNG00000006126) #24 GDPD5 (ENSPSNG00000005980) #25 SERPINH1 (ENSPSNG00000005838) #26 MAP6 (ENSPSNG00000005782) #27 MOGAT2 (ENSPSNG00000005741) #28 DGAT2 (ENSPSNG00000005697) #29 LSM4 (ENSPSNG00000005672) UVRAG (ENSPSNG00000005649) #30 WNT11 (ENSPSNG00000005604) #31 ENSPSNG00000005572 #32 GVQW3 (ENSPSNG00000005560) EMSY (ENSPSNG00000005336) #33 LRRC32 (ENSPSNG00000005215) #34 ENSPSNG00000005198 ENSPSNG00000005176 Vaquita MODERN SPECIES 20 AHR (ENSPSNG00000008778) SNX13 (ENSPSNG00000008877) HDAC9 (ENSPSNG00000009029) ENSPSNG00000009173 TWIST1 (ENSPSNG00000009224) FERD3L (ENSPSNG00000009256) ENSPSNG00000009323 POLR1F (ENSPSNG00000009354) TMEM196 (ENSPSNG00000009438) MACC1 (ENSPSNG00000009595) ITGB8 (ENSPSNG00000009703) ENSPSNG00000009751 ENSPSNG00000009781 ENSPSNG00000009873 SP8 (ENSPSNG00000006838) ENSPSNG00000006887 #22 SP4 (ENSPSNG00000007062) ENSPSNG00000007110 DNAH11 (ENSPSNG00000007306) CDCA7L (ENSPSNG00000008676) RAPGEF5 (ENSPSNG00000008908) IL6 (ENSPSNG00000009204) HYCC1 (ENSPSNG00000009328) KLHL7 (ENSPSNG00000009482) NUP42 (ENSPSNG00000009532) GPNMB (ENSPSNG00000009579) MALSU1 (ENSPSNG00000009639) IGF2BP3 (ENSPSNG00000009708) ENSPSNG00000009952 ENSPSNG00000009998 ENSPSNG00000010201 Monodontidae ANCESTRAL SPECIES 2 ENSGT00390000004396 #7 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B.h.b.a #10 ENSGT01000000221138 ENSGT00390000006450 #11 ENSGT01100000263806 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT01010000229934 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01010000227694 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00610000086173.a.b ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 Beluga whale DUPLICATION Beluga whale MODERN SPECIES 2 PGM2L1 (ENSDLEG00000002819) #9 KCNE3 (ENSDLEG00000002833) #10 ENSDLEG00000002840 LIPT2 (ENSDLEG00000002850) #11 POLD3 (ENSDLEG00000002858) CHRDL2 (ENSDLEG00000002872) #13 RNF169 (ENSDLEG00000002883) #14 XRRA1 (ENSDLEG00000002903) #15 ENSDLEG00000002925 #15 ENSDLEG00000002932 #16 ENSDLEG00000002942 #16 NEU3 (ENSDLEG00000002947) #17 SLCO2B1 (ENSDLEG00000002954) #19 TPBGL (ENSDLEG00000002963) #20 ARRB1 (ENSDLEG00000002976) #21 RPS3 (ENSDLEG00000003018) #22 KLHL35 (ENSDLEG00000003032) #24 ENSDLEG00000003043 GDPD5 (ENSDLEG00000003060) #25 SERPINH1 (ENSDLEG00000003078) #26 MAP6 (ENSDLEG00000003085) #27 ENSDLEG00000003098 MOGAT2 (ENSDLEG00000003103) #28 DGAT2 (ENSDLEG00000003119) #30 LSM4 (ENSDLEG00000003159) WNT11 (ENSDLEG00000003165) #31 THAP12 (ENSDLEG00000003173) #32 GVQW3 (ENSDLEG00000003193) EMSY (ENSDLEG00000003214) #33 LRRC32 (ENSDLEG00000003305) #34 ENSDLEG00000003313 Beluga whale MODERN SPECIES 72 TSPAN13 (ENSDLEG00000019687) AGR2 (ENSDLEG00000019695) AHR (ENSDLEG00000019698) SNX13 (ENSDLEG00000019708) HDAC9 (ENSDLEG00000019802) ENSDLEG00000020794 ENSDLEG00000020800 ENSDLEG00000020805 TWIST1 (ENSDLEG00000020806) FERD3L (ENSDLEG00000020808) TWISTNB (ENSDLEG00000020810) TMEM196 (ENSDLEG00000020812) ITGB8 (ENSDLEG00000020850) ENSDLEG00000020866 SP8 (ENSDLEG00000020883) ENSDLEG00000020889 #22 SP4 (ENSDLEG00000020894) ENSDLEG00000020902 DNAH11 (ENSDLEG00000021082) CDCA7L (ENSDLEG00000021687) RAPGEF5 (ENSDLEG00000021689) IL6 (ENSDLEG00000021697) ENSDLEG00000021700 FAM126A (ENSDLEG00000021707) KLHL7 (ENSDLEG00000021717) GPNMB (ENSDLEG00000021726) MALSU1 (ENSDLEG00000021728) IGF2BP3 (ENSDLEG00000021731) ENSDLEG00000021737 ENSDLEG00000021739 ENSDLEG00000021741 Narwhal DUPLICATION Narwhal MODERN SPECIES 314 PPME1 (ENSMMNG00015020414) #7 PGM2L1 (ENSMMNG00015020391) #9 ENSMMNG00015020370 #10 LIPT2 (ENSMMNG00015020361) #11 ENSMMNG00015020343 CHRDL2 (ENSMMNG00015020311) #13 RNF169 (ENSMMNG00015020277) #14 XRRA1 (ENSMMNG00015020206) #15 ENSMMNG00015020124 #16 NEU3 (ENSMMNG00015020097) #17 SLCO2B1 (ENSMMNG00015019988) #19 TPBGL (ENSMMNG00015019934) #20 ARRB1 (ENSMMNG00015019886) #21 KLHL35 (ENSMMNG00015019832) #24 ENSMMNG00015019811 RPS3 (ENSMMNG00015019776) #22 GDPD5 (ENSMMNG00015019694) #25 SERPINH1 (ENSMMNG00015019659) #26 MAP6 (ENSMMNG00015019635) #27 ENSMMNG00015019612 MOGAT2 (ENSMMNG00015019582) #28 DGAT2 (ENSMMNG00015019561) #29 LSM4 (ENSMMNG00015019548) UVRAG (ENSMMNG00015019516) #30 WNT11 (ENSMMNG00015019462) #31 ENSMMNG00015019441 #32 GVQW3 (ENSMMNG00015019432) EMSY (ENSMMNG00015019155) #33 LRRC32 (ENSMMNG00015019035) #34 ENSMMNG00015019014 TSKU (ENSMMNG00015018998) #35 Narwhal MODERN SPECIES 306 AGR3 (ENSMMNG00015005889) AHR (ENSMMNG00015005766) SNX13 (ENSMMNG00015005684) ENSMMNG00015005627 HDAC9 (ENSMMNG00015005496) ENSMMNG00015005446 TWIST1 (ENSMMNG00015005433) FERD3L (ENSMMNG00015005424) POLR1F (ENSMMNG00015005418) TMEM196 (ENSMMNG00015014600) MACC1 (ENSMMNG00015014571) ITGB8 (ENSMMNG00015014541) ENSMMNG00015014524 ENSMMNG00015014504 SP8 (ENSMMNG00015014490) ENSMMNG00015014481 #22 ENSMMNG00015014468 SP4 (ENSMMNG00015014456) DNAH11 (ENSMMNG00015014124) CDCA7L (ENSMMNG00015013916) RAPGEF5 (ENSMMNG00015013835) IL6 (ENSMMNG00015013785) ENSMMNG00015013758 HYCC1 (ENSMMNG00015013717) KLHL7 (ENSMMNG00015013694) NUP42 (ENSMMNG00015013671) GPNMB (ENSMMNG00015013654) MALSU1 (ENSMMNG00015013639) IGF2BP3 (ENSMMNG00015013611) ENSMMNG00015013599 ENSMMNG00015013578 Suina ANCESTRAL SPECIES 5 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01100000263806 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000163113 #18 ENSGT00940000162049 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Chacoan peccary MODERN SPECIES 32 PPME1 (ENSCWAG00000002394) #7 P4HA3 (ENSCWAG00000002379) #8 PGM2L1 (ENSCWAG00000002367) #9 KCNE3 (ENSCWAG00000002355) #10 LIPT2 (ENSCWAG00000002349) #11 ENSCWAG00000002330 CHRDL2 (ENSCWAG00000002300) #13 RNF169 (ENSCWAG00000002279) #14 XRRA1 (ENSCWAG00000002186) #15 SPCS2 (ENSCWAG00000002150) #16 NEU3 (ENSCWAG00000002122) #17 OR2AT4 (ENSCWAG00000002105) #18 SLCO2B1 (ENSCWAG00000002081) #19 TPBGL (ENSCWAG00000002069) #20 ARRB1 (ENSCWAG00000001998) #21 RPS3 (ENSCWAG00000001939) #22 KLHL35 (ENSCWAG00000001904) #24 GDPD5 (ENSCWAG00000001855) #25 SERPINH1 (ENSCWAG00000001819) #26 ENSCWAG00000001805 #27 MOGAT2 (ENSCWAG00000001781) #28 DGAT2 (ENSCWAG00000001740) #29 UVRAG (ENSCWAG00000001705) #30 WNT11 (ENSCWAG00000001687) #31 THAP12 (ENSCWAG00000001677) #32 GVQW3 (ENSCWAG00000001671) EMSY (ENSCWAG00000001547) #33 LRRC32 (ENSCWAG00000001490) #34 ENSCWAG00000001431 TSKU (ENSCWAG00000001407) #35 ACER3 (ENSCWAG00000001370) #36 Pig MODERN SPECIES 17 P4HA3 (ENSSSCG00000014840) #8 PGM2L1 (ENSSSCG00000014838) #9 ENSSSCG00000042110 KCNE3 (ENSSSCG00000029323) #10 LIPT2 (ENSSSCG00000024060) #11 POLD3 (ENSSSCG00000027506) CHRDL2 (ENSSSCG00000014843) #13 RNF169 (ENSSSCG00000021822) #14 XRRA1 (ENSSSCG00000021702) #15 SPCS2 (ENSSSCG00000014850) #16 NEU3 (ENSSSCG00000021638) #17 OR2AT4 (ENSSSCG00000023029) #18 ENSSSCG00000025925 SLCO2B1 (ENSSSCG00000014851) #19 ARRB1 (ENSSSCG00000014852) #21 RPS3 (ENSSSCG00000014855) #22 KLHL35 (ENSSSCG00000014854) #24 GDPD5 (ENSSSCG00000014853) #25 SERPINH1 (ENSSSCG00000039468) #26 MAP6 (ENSSSCG00000014860) #27 ENSSSCG00000014861 #28 ENSSSCG00000061550 #28 DGAT2 (ENSSSCG00000034102) #29 UVRAG (ENSSSCG00000028979) #30 WNT11 (ENSSSCG00000022347) #31 THAP12 (ENSSSCG00000040639) #32 GVQW3 (ENSSSCG00000062483) EMSY (ENSSSCG00000014868) #33 LRRC32 (ENSSSCG00000014869) #34 ENSSSCG00000055915 TSKU (ENSSSCG00000014871) #35 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 Hedgehog MODERN SPECIES 14112 RPS3 (ENSEEUG00000014531) #22 Common shrew MODERN SPECIES 3485 RPS3 (ENSSARG00000006979) #22 Atlantogenata ANCESTRAL SPECIES 35 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01060000248648 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00940000163174 #37 ENSGT00940000156536 Xenarthra ANCESTRAL SPECIES 655 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 Sloth MODERN SPECIES 4006 RPS3 (ENSCHOG00000005328) #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 4440 ENSDNOG00000014888 #22 MSH6 (ENSDNOG00000034423) FBXO11 (ENSDNOG00000003057) Armadillo MODERN SPECIES 1116 SLCO2B1 (ENSDNOG00000031967) #19 TPBGL (ENSDNOG00000048757) #20 ARRB1 (ENSDNOG00000040731) #21 RPS3 (ENSDNOG00000037189) #22 KLHL35 (ENSDNOG00000019775) #24 ENSDNOG00000032746 #25 Afrotheria ANCESTRAL SPECIES 41 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.d ##32 ENSGT00530000063516.a.a.c.a ##32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00940000163174 #37 Tenrec MODERN SPECIES 5024 RPS3 (ENSETEG00000015500) #22 Afrotheria_a ANCESTRAL SPECIES 71 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.d ##32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00940000163174 #37 ENSGT00940000156536 Hyrax MODERN SPECIES 3665 RPS3 (ENSPCAG00000003033) #22 Elephant MODERN SPECIES 563 LIPT2 (ENSLAFG00000012749) #11 ENSLAFG00000004098 #12 CHRDL2 (ENSLAFG00000009783) #13 RNF169 (ENSLAFG00000005991) #14 XRRA1 (ENSLAFG00000005994) #15 SPCS2 (ENSLAFG00000005996) #16 NEU3 (ENSLAFG00000016015) #17 ENSLAFG00000031826 OR2AT4 (ENSLAFG00000022125) #18 ENSLAFG00000026465 ENSLAFG00000029633 ENSLAFG00000026542 SLCO2B1 (ENSLAFG00000018182) #19 TPBGL (ENSLAFG00000026034) #20 ARRB1 (ENSLAFG00000022589) #21 RPS3 (ENSLAFG00000004297) #22 KLHL35 (ENSLAFG00000021869) #24 GDPD5 (ENSLAFG00000001164) #25 SERPINH1 (ENSLAFG00000003780) #26 MAP6 (ENSLAFG00000003783) #27 MOGAT2 (ENSLAFG00000011173) #28 DGAT2 (ENSLAFG00000003799) #29 ENSLAFG00000016634 #30 WNT11 (ENSLAFG00000011379) #31 THAP12 (ENSLAFG00000011743) ##32 EMSY (ENSLAFG00000011748) #33 LRRC32 (ENSLAFG00000017456) #34 ENSLAFG00000030179 TSKU (ENSLAFG00000010654) #35 B3GNT6 (ENSLAFG00000002020) #37 CAPN5 (ENSLAFG00000002136) Marsupialia ANCESTRAL SPECIES 28 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.yb ENSGT00940000162049.xb ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT01100000263754 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Opossum DUPLICATION Opossum MODERN SPECIES 3 CHRDL2 (ENSMODG00000007176) #13 RNF169 (ENSMODG00000007163) #14 XRRA1 (ENSMODG00000007151) #15 SPCS2 (ENSMODG00000042403) #16 NEU3 (ENSMODG00000039572) #17 ENSMODG00000036612 ENSMODG00000007071 ENSMODG00000049054 ENSMODG00000029536 ENSMODG00000024027 ENSMODG00000007063 SLCO2B1 (ENSMODG00000007051) #19 ENSMODG00000007031 #20 ARRB1 (ENSMODG00000007021) #21 ENSMODG00000024030 RPS3 (ENSMODG00000006945) #22 KLHL35 (ENSMODG00000006983) #24 ENSMODG00000006862 #25 ENSMODG00000045071 #25 SERPINH1 (ENSMODG00000006814) #26 ENSMODG00000038222 ENSMODG00000043186 #27 ENSMODG00000006756 #28 DGAT2 (ENSMODG00000006739) #29 ENSMODG00000006703 UVRAG (ENSMODG00000006698) #30 ENSMODG00000002815 ENSMODG00000045523 ENSMODG00000002794 ENSMODG00000025585 ENSMODG00000044360 Opossum MODERN SPECIES IPMK (ENSMODG00000016132) ENSMODG00000016135 UBE2D1 (ENSMODG00000013897) ENSMODG00000016127 ENSMODG00000016125 PHYHIPL (ENSMODG00000016112) FAM13C (ENSMODG00000016104) SLC16A9 (ENSMODG00000016083) SPOCK2 (ENSMODG00000000012) ASCC1 (ENSMODG00000040209) ANAPC16 (ENSMODG00000000031) DDIT4 (ENSMODG00000000035) DNAJB12 (ENSMODG00000000043) MICU1 (ENSMODG00000000067) ENSMODG00000043583 ENSMODG00000000084 #22 MCU (ENSMODG00000000088) OIT3 (ENSMODG00000000095) PLA2G12B (ENSMODG00000000102) P4HA1 (ENSMODG00000000121) NUDT13 (ENSMODG00000000142) ENSMODG00000045807 ECD (ENSMODG00000000149) FAM149B1 (ENSMODG00000000161) DNAJC9 (ENSMODG00000000167) MRPS16 (ENSMODG00000000168) CFAP70 (ENSMODG00000000188) ENSMODG00000000211 PPP3CB (ENSMODG00000000220) USP54 (ENSMODG00000000250) MYOZ1 (ENSMODG00000000272) Marsupialia_b ANCESTRAL SPECIES 20 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.yb ENSGT00940000162049.xb ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT01100000263754 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Diprotodontia ANCESTRAL SPECIES 24 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.yb ENSGT00940000162049.xb ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT01100000263754 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.e.a #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Wallaby MODERN SPECIES 5588 RPS3 (ENSMEUG00000011581) #22 ENSMEUG00000011588 #24 Diprotodontia_a ANCESTRAL SPECIES 25 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.yb ENSGT00940000162049.xb.c ENSGT00940000162049.xb.d ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT01100000263754 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.e.a #32 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Common wonbat DUPLICATION Common wonbat DUPLICATION Common wonbat MODERN SPECIES 577 OLIG3 (ENSVURG00010003481) ENSVURG00010003453 PERP (ENSVURG00010003438) ARFGEF3 (ENSVURG00010003304) SMIM28 (ENSVURG00010003271) HEBP2 (ENSVURG00010003262) NHSL1 (ENSVURG00010003237) CCDC28A (ENSVURG00010003218) ECT2L (ENSVURG00010003149) REPS1 (ENSVURG00010003037) ENSVURG00010003010 HECA (ENSVURG00010002972) ENSVURG00010002957 TXLNB (ENSVURG00010002930) CITED2 (ENSVURG00010002923) ENSVURG00010002890 #22 ENSVURG00010002865 NMBR (ENSVURG00010002830) GJE1 (ENSVURG00010002824) VTA1 (ENSVURG00010002812) ADGRG6 (ENSVURG00010002740) HIVEP2 (ENSVURG00010002680) AIG1 (ENSVURG00010002661) ADAT2 (ENSVURG00010002626) PEX3 (ENSVURG00010002609) FUCA2 (ENSVURG00010002596) PHACTR2 (ENSVURG00010002552) LTV1 (ENSVURG00010002495) ENSVURG00010002486 PLAGL1 (ENSVURG00010002478) ENSVURG00010002464 Common wonbat MODERN SPECIES 1029 KCNN2 (ENSVURG00010006397) TRIM36 (ENSVURG00010006391) PGGT1B (ENSVURG00010006384) CCDC112 (ENSVURG00010006372) FEM1C (ENSVURG00010006359) PRRC1 (ENSVURG00010006350) MEGF10 (ENSVURG00010006296) ENSVURG00010006278 ENSVURG00010006265 LMNB1 (ENSVURG00010006260) PHAX (ENSVURG00010006250) ALDH7A1 (ENSVURG00010006228) GRAMD2B (ENSVURG00010006203) ENSVURG00010006190 ZNF608 (ENSVURG00010006152) ENSVURG00010006125 #22 ENSVURG00010006119 GADD45G (ENSVURG00010006111) MAN2A1 (ENSVURG00010006070) ENSVURG00010006041 FER (ENSVURG00010006015) ENSVURG00010005997 FBXL17 (ENSVURG00010005921) EFNA5 (ENSVURG00010005872) ENSVURG00010005823 NUDT12 (ENSVURG00010005772) ENSVURG00010005760 MACIR (ENSVURG00010005753) PPIP5K2 (ENSVURG00010005612) GIN1 (ENSVURG00010005588) PAM (ENSVURG00010005526) Common wonbat MODERN SPECIES 342 P4HA3 (ENSVURG00010017249) #8 PGM2L1 (ENSVURG00010017230) #9 KCNE3 (ENSVURG00010017220) #10 LIPT2 (ENSVURG00010017202) #11 ENSVURG00010017183 CHRDL2 (ENSVURG00010017166) #13 ENSVURG00010017157 #14 XRRA1 (ENSVURG00010017136) #15 NEU3 (ENSVURG00010017132) #17 ENSVURG00010017126 ENSVURG00010017123 ENSVURG00010017115 SLCO2B1 (ENSVURG00010017093) #19 TPBGL (ENSVURG00010017080) #20 ARRB1 (ENSVURG00010017049) #21 ENSVURG00010017023 #22 ENSVURG00010017014 #24 GDPD5 (ENSVURG00010017005) #25 SERPINH1 (ENSVURG00010016989) #26 ENSVURG00010016983 ENSVURG00010016973 #27 MOGAT2 (ENSVURG00010016965) #28 DGAT2 (ENSVURG00010016956) #29 UVRAG (ENSVURG00010016946) #30 WNT11 (ENSVURG00010016934) #31 ENSVURG00010016929 #32 ENSVURG00010016926 #32 EMSY (ENSVURG00010016923) #33 LRRC32 (ENSVURG00010016917) #34 ENSVURG00010016875 ENSVURG00010016858 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1012 DENND6A (ENSVURG00010003576) SLMAP (ENSVURG00010003817) FLNB (ENSVURG00010003968) ENSVURG00010004062 DNASE1L3 (ENSVURG00010004073) ABHD6 (ENSVURG00010004113) RPP14 (ENSVURG00010004122) ENSVURG00010004130 PXK (ENSVURG00010004160) PDHB (ENSVURG00010004455) KCTD6 (ENSVURG00010004491) ACOX2 (ENSVURG00010004517) FAM107A (ENSVURG00010004527) FAM3D (ENSVURG00010004538) CFAP20DC (ENSVURG00010004687) ENSVURG00010004775 #22 ENSVURG00010004808 ENSVURG00010004856 PTPRG (ENSVURG00010004969) ENSVURG00010004992 FEZF2 (ENSVURG00010005007) ENSVURG00010005137 SYNPR (ENSVURG00010005907) SNTN (ENSVURG00010005958) C3orf49 (ENSVURG00010005993) ENSVURG00010006017 ATXN7 (ENSVURG00010006027) PSMD6 (ENSVURG00010006048) PRICKLE2 (ENSVURG00010006134) ADAMTS9 (ENSVURG00010006187) MAGI1 (ENSVURG00010006288) Common wonbat MODERN SPECIES 1064 ENSVURG00010009264 MDFIC (ENSVURG00010009278) FOXP2 (ENSVURG00010009307) PPP1R3A (ENSVURG00010009386) ENSVURG00010009413 GPR85 (ENSVURG00010009425) ENSVURG00010009444 BMT2 (ENSVURG00010009456) TMEM168 (ENSVURG00010009475) LSMEM1 (ENSVURG00010009495) IFRD1 (ENSVURG00010009503) ZNF277 (ENSVURG00010009551) ENSVURG00010009562 #22 DOCK4 (ENSVURG00010009623) ENSVURG00010009722 ENSVURG00010009725 LRRN3 (ENSVURG00010009742) DNAJB9 (ENSVURG00010009752) THAP5 (ENSVURG00010009760) ENSVURG00010009772 ENSVURG00010009781 PNPLA8 (ENSVURG00010009810) NRCAM (ENSVURG00010009866) LAMB4 (ENSVURG00010010181) LAMB1 (ENSVURG00010010268) DLD (ENSVURG00010010309) SLC26A3 (ENSVURG00010010347) ENSVURG00010010366 koala DUPLICATION koala DUPLICATION koala MODERN SPECIES 3 SLC38A9 (ENSPCIG00000024744) PLPP1 (ENSPCIG00000024736) MTREX (ENSPCIG00000024730) DHX29 (ENSPCIG00000024988) CCNO (ENSPCIG00000037284) MCIDAS (ENSPCIG00000025289) GPX8 (ENSPCIG00000025291) ENSPCIG00000025290 GZMA (ENSPCIG00000025293) ENSPCIG00000025294 ENSPCIG00000019866 ENSPCIG00000037382 SNX18 (ENSPCIG00000019867) HSPB3 (ENSPCIG00000019868) ARL15 (ENSPCIG00000033856) ENSPCIG00000022539 #22 NDUFS4 (ENSPCIG00000019873) FST (ENSPCIG00000009564) MOCS2 (ENSPCIG00000019875) ITGA2 (ENSPCIG00000019877) ENSPCIG00000004871 PELO (ENSPCIG00000004880) ITGA1 (ENSPCIG00000004822) ISL1 (ENSPCIG00000022290) PARP8 (ENSPCIG00000022278) ENSPCIG00000035468 ENSPCIG00000012453 HCN1 (ENSPCIG00000030065) ENSPCIG00000019386 MRPS30 (ENSPCIG00000023080) FGF10 (ENSPCIG00000011758) koala MODERN SPECIES 58 ENSPCIG00000018930 ENSPCIG00000036156 ENSPCIG00000018955 ENSPCIG00000030760 ENSPCIG00000018968 ENSPCIG00000033011 ENSPCIG00000018973 ENSPCIG00000018977 ENSPCIG00000018981 ENSPCIG00000018985 ENSPCIG00000018986 ENSPCIG00000034035 ENSPCIG00000018987 ENSPCIG00000018993 ENSPCIG00000018995 ENSPCIG00000018997 #22 ENSPCIG00000036092 ENSPCIG00000019002 ENSPCIG00000019004 ENSPCIG00000037171 ENSPCIG00000019005 FAM83H (ENSPCIG00000019007) IQANK1 (ENSPCIG00000019010) SCRIB (ENSPCIG00000019027) PUF60 (ENSPCIG00000020270) NRBP2 (ENSPCIG00000020290) PLEC (ENSPCIG00000014981) GRINA (ENSPCIG00000009114) ENSPCIG00000034553 ENSPCIG00000009107 OPLAH (ENSPCIG00000009104) koala MODERN SPECIES 35 P4HA3 (ENSPCIG00000021825) #8 PGM2L1 (ENSPCIG00000021827) #9 KCNE3 (ENSPCIG00000021830) #10 LIPT2 (ENSPCIG00000021831) #11 ENSPCIG00000021832 #12 CHRDL2 (ENSPCIG00000021833) #13 ENSPCIG00000021835 #15 SPCS2 (ENSPCIG00000021840) #16 NEU3 (ENSPCIG00000021841) #17 ENSPCIG00000021843 ENSPCIG00000024126 ENSPCIG00000024125 SLCO2B1 (ENSPCIG00000024128) #19 ENSPCIG00000024142 #20 ARRB1 (ENSPCIG00000024137) #21 ENSPCIG00000024144 #22 KLHL35 (ENSPCIG00000024150) #24 ENSPCIG00000024154 #25 ENSPCIG00000031819 #25 SERPINH1 (ENSPCIG00000031151) #26 ENSPCIG00000009765 ENSPCIG00000009766 #27 MOGAT2 (ENSPCIG00000009767) #28 DGAT2 (ENSPCIG00000009770) #29 UVRAG (ENSPCIG00000009778) #30 WNT11 (ENSPCIG00000011373) #31 ENSPCIG00000011379 ENSPCIG00000011376 #32 EMSY (ENSPCIG00000011389) #33 LRRC32 (ENSPCIG00000011397) #34 ENSPCIG00000011400 koala MODERN SPECIES 106 ENSPCIG00000032559 ENSPCIG00000023300 ENSPCIG00000023299 NR4A2 (ENSPCIG00000015078) ENSPCIG00000015071 GPD2 (ENSPCIG00000015066) GALNT5 (ENSPCIG00000003972) ERMN (ENSPCIG00000003984) CYTIP (ENSPCIG00000003994) ACVR1C (ENSPCIG00000004001) ENSPCIG00000004022 ACVR1 (ENSPCIG00000004031) UPP2 (ENSPCIG00000028123) ENSPCIG00000028794 PKP4 (ENSPCIG00000028795) ENSPCIG00000036633 #22 DAPL1 (ENSPCIG00000037017) TANC1 (ENSPCIG00000002529) WDSUB1 (ENSPCIG00000002545) BAZ2B (ENSPCIG00000003070) MARCHF7 (ENSPCIG00000018311) CD302 (ENSPCIG00000018314) LY75 (ENSPCIG00000018322) ENSPCIG00000018379 PLA2R1 (ENSPCIG00000018373) ENSPCIG00000018386 ITGB6 (ENSPCIG00000018382) RBMS1 (ENSPCIG00000018405) TANK (ENSPCIG00000030398) PSMD14 (ENSPCIG00000030393) TBR1 (ENSPCIG00000030392) koala MODERN SPECIES 159 BRI3 (ENSPCIG00000030298) ENSPCIG00000030294 TECPR1 (ENSPCIG00000030290) BHLHA15 (ENSPCIG00000030288) LMTK2 (ENSPCIG00000030286) ENSPCIG00000030285 ENSPCIG00000030283 ENSPCIG00000030282 ENSPCIG00000030281 PMS2 (ENSPCIG00000030280) AIMP2 (ENSPCIG00000030279) EIF2AK1 (ENSPCIG00000030277) ANKRD61 (ENSPCIG00000030278) USP42 (ENSPCIG00000030275) CYTH3 (ENSPCIG00000030271) ENSPCIG00000030274 #22 ENSPCIG00000030272 RAC1 (ENSPCIG00000030270) DAGLB (ENSPCIG00000030269) KDELR2 (ENSPCIG00000030268) OTOA (ENSPCIG00000030267) METTL9 (ENSPCIG00000030262) IGSF6 (ENSPCIG00000030264) ENSPCIG00000030261 CDR2 (ENSPCIG00000032986) POLR3E (ENSPCIG00000019767) EEF2K (ENSPCIG00000019761) ENSPCIG00000011458 MOSMO (ENSPCIG00000033838) PDZD9 (ENSPCIG00000008907) UQCRC2 (ENSPCIG00000008904) Sauria ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 Lepidosauria ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 Episquamata ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 Toxicofera ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 Elapidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.b #22 Indian cobra MODERN SPECIES 4 PPME1 (ENSNNAG00000009058) #7 UCP3 (ENSNNAG00000008795) UCP2 (ENSNNAG00000008758) DNAJB13 (ENSNNAG00000008717) PAAF1 (ENSNNAG00000008661) COA4 (ENSNNAG00000008652) MRPL48 (ENSNNAG00000008628) RAB6A (ENSNNAG00000008615) PLEKHB1 (ENSNNAG00000008532) FAM168A (ENSNNAG00000008512) RELT (ENSNNAG00000008426) ARHGEF17 (ENSNNAG00000008336) P2RY6 (ENSNNAG00000008304) P2RY2 (ENSNNAG00000008215) ENSNNAG00000008172 RPS3 (ENSNNAG00000008098) #22 SERPINH1 (ENSNNAG00000008062) #26 MYO7A (ENSNNAG00000007648) OMP (ENSNNAG00000007612) ACER3 (ENSNNAG00000007590) #36 TSKU (ENSNNAG00000010478) #35 ENSNNAG00000010409 EMSY (ENSNNAG00000010147) #33 UVRAG (ENSNNAG00000010081) #30 RSF1 (ENSNNAG00000009970) AAMDC (ENSNNAG00000009887) ENSNNAG00000009766 KCTD14 (ENSNNAG00000009732) ENSNNAG00000009708 ENSNNAG00000009693 ENSNNAG00000009633 Euteleostomi DUPLICATION Euteleostomi ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Anura ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000009308 ENSLLEG00000009455 ENSLLEG00000009479 WNT11 (ENSLLEG00000009513) #31 ENSLLEG00000009736 ENSLLEG00000009759 THAP12 (ENSLLEG00000009776) #32 ENSLLEG00000005200 ENSLLEG00000005231 SERPINH1 (ENSLLEG00000005239) #26 FCHSD2 (ENSLLEG00000005302) ENSLLEG00000005767 ENSLLEG00000005808 ENSLLEG00000005901 ENSLLEG00000005925 ENSLLEG00000005972 ##22 ENSLLEG00000006333 ENSLLEG00000006432 ENSLLEG00000006462 ENSLLEG00000006513 ENSLLEG00000006551 ENSLLEG00000006566 CUL5 (ENSLLEG00000006636) ACAT1 (ENSLLEG00000006942) NPAT (ENSLLEG00000007156) ATM (ENSLLEG00000007322) C11orf65 (ENSLLEG00000007570) POGLUT3 (ENSLLEG00000007628) ENSLLEG00000007677 ENSLLEG00000007687 ENSLLEG00000007708 Amniota ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Sauria ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Archelosauria ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Archosauria ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Aves ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Neognathae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Galloanserae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Phasianidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Phasianidae_b ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Turkey MODERN SPECIES ENSMGAG00000018965 ENSMGAG00000003945 ENSMGAG00000015298 MRPL48 (ENSMGAG00000015300) ENSMGAG00000015302 COA4 (ENSMGAG00000015301) ENSMGAG00000015304 DNAJB13 (ENSMGAG00000015303) P4HA3 (ENSMGAG00000015311) #8 ENSMGAG00000015310 #7 ENSMGAG00000015306 ENSMGAG00000020616 #17 ENSMGAG00000020834 ENSMGAG00000015293 SERPINH1 (ENSMGAG00000015291) #26 ENSMGAG00000021654 ##22 ENSMGAG00000015290 #25 KLHL35 (ENSMGAG00000015289) #24 ENSMGAG00000015287 #27 ENSMGAG00000015288 #29 ENSMGAG00000021525 ENSMGAG00000019864 ENSMGAG00000021954 NUP98 (ENSMGAG00000015286) PGAP2 (ENSMGAG00000004172) RHOG (ENSMGAG00000016029) STIM1 (ENSMGAG00000022860) ENSMGAG00000010735 RRM1 (ENSMGAG00000010749) ENSMGAG00000016213 ENSMGAG00000016218 Mammalia ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Theria ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Eutheria ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Carnivora ANCESTRAL SPECIES 7 ENSGT00530000063822.a.a ENSGT00940000156046 ENSGT00390000001680 ENSGT00940000159310 ENSGT00940000160980 ENSGT00390000018100 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a ENSGT00860000135900 ENSGT00940000160199 ENSGT00940000153571.b ENSGT00390000016309 ENSGT00390000002169 ENSGT00530000063472.b.b.a.b ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00940000155960.b ENSGT00390000006758.b ENSGT00940000157402 ENSGT00950000182976.a.b ENSGT00440000037417.A ENSGT00940000158268.a ENSGT00940000164881 ENSGT00390000013482 ENSGT00390000004456 ENSGT00940000156734 ENSGT00730000111983 ENSGT01010000222360.D.b ENSGT00410000028070 ENSGT00940000155391.a ENSGT00390000001443 Caniformia ANCESTRAL SPECIES 25 ENSGT00940000155379 ENSGT00530000063822.a.a ENSGT00940000156046 ENSGT00390000001680 ENSGT00940000159310 ENSGT00940000160980 ENSGT00390000018100 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a ENSGT00940000160199 ENSGT00940000153571.b ENSGT00390000016309 ENSGT00390000002169 ENSGT00530000063472.b.b.a.b ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00940000155960.b ENSGT00390000006758.b ENSGT00940000157402 ENSGT00950000182976.a.b ENSGT00440000037417.A ENSGT00940000158268.a ENSGT00940000164881 ENSGT00390000013482 ENSGT00390000004456 ENSGT00940000156734 ENSGT00730000111983 ENSGT01010000222360.D.b ENSGT00410000028070 ENSGT00940000155391.a ENSGT00390000001443 Caniformia_b ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Ursidae ANCESTRAL SPECIES 8 ENSGT00390000013367 ENSGT00940000156041 ENSGT00940000154688.b ENSGT00940000159061 ENSGT00390000009505 ENSGT00940000160007 ENSGT00390000007370 ENSGT00390000007315 ENSGT00940000161310 ENSGT00390000001014.d ENSGT00940000161356 ENSGT00390000010067 ENSGT00940000160728 ENSGT00390000009077.i ENSGT00940000156256 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00390000002362 ENSGT00940000156397.a.a ENSGT00950000183051.b.a ENSGT00490000043434 ENSGT00530000063023.A.a ENSGT00390000011085 ENSGT00940000157021 ENSGT00940000153725.a.b.a ENSGT00420000029858 ENSGT00420000029847 ENSGT00940000156370 ENSGT00390000018876 ENSGT00390000009456 ENSGT00940000153837.a.b ENSGT00390000007074 Ursus ANCESTRAL SPECIES 198 ENSGT00390000009077.j.a.b ENSGT00390000010067.h ENSGT00940000156256 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00390000002362 ENSGT00940000156397.a.a ENSGT00950000183051.b.a ENSGT00490000043434 ENSGT00530000063023.A.a ENSGT00390000011085 ENSGT00940000157021 ENSGT00940000153725.a.b.a ENSGT00420000029858 ENSGT00420000029847 ENSGT00940000156370 ENSGT00390000018876 ENSGT00390000009456 ENSGT00940000153837.a.b ENSGT00390000007074 American black bear MODERN SPECIES 1369 CCNE1 (ENSUAMG00000007369) ENSUAMG00000007373 ##22 Polar bear MODERN SPECIES 155 ENSUMAG00000013469 ENSUMAG00000013478 ENSUMAG00000013482 CCNE1 (ENSUMAG00000013484) ENSUMAG00000013491 ##22 URI1 (ENSUMAG00000013495) ZNF536 (ENSUMAG00000013502) TSHZ3 (ENSUMAG00000013540) ZNF507 (ENSUMAG00000013564) DPY19L3 (ENSUMAG00000013572) PDCD5 (ENSUMAG00000013611) ANKRD27 (ENSUMAG00000013702) TDRD12 (ENSUMAG00000014314) SLC7A9 (ENSUMAG00000014340) CEP89 (ENSUMAG00000014588) FAAP24 (ENSUMAG00000014600) RHPN2 (ENSUMAG00000014602) GPATCH1 (ENSUMAG00000014645) WDR88 (ENSUMAG00000014767) SLC7A10 (ENSUMAG00000014779) Giant Panda MODERN SPECIES 3 NETO2 (ENSAMEG00000004857) DNAJA2 (ENSAMEG00000004874) GPT2 (ENSAMEG00000004904) C16orf87 (ENSAMEG00000000887) MYLK3 (ENSAMEG00000000866) ORC6 (ENSAMEG00000018347) ENSAMEG00000018344 ENSAMEG00000018332 ENSAMEG00000018330 VSTM2B (ENSAMEG00000027962) ENSAMEG00000027559 ENSAMEG00000003172 PLEKHF1 (ENSAMEG00000019032) ENSAMEG00000030806 CCNE1 (ENSAMEG00000009668) ENSAMEG00000007309 ##22 URI1 (ENSAMEG00000009637) ZNF536 (ENSAMEG00000009725) TSHZ3 (ENSAMEG00000009733) ZNF507 (ENSAMEG00000009742) DPY19L3 (ENSAMEG00000009748) PDCD5 (ENSAMEG00000009766) ANKRD27 (ENSAMEG00000009784) RGS9BP (ENSAMEG00000028432) NUDT19 (ENSAMEG00000009842) ENSAMEG00000009847 SLC7A9 (ENSAMEG00000015459) CEP89 (ENSAMEG00000015514) FAAP24 (ENSAMEG00000015524) RHPN2 (ENSAMEG00000015528) GPATCH1 (ENSAMEG00000015575) Canidae ANCESTRAL SPECIES 32 ENSGT00530000063822.b ENSGT00530000063822.a.a ENSGT00940000156046 ENSGT00390000001680 ENSGT00940000159310 ENSGT00940000160980 ENSGT00390000018100 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a ENSGT00940000160199 ENSGT00940000153571.b ENSGT00390000016309 ENSGT00390000002169 ENSGT00530000063472.b.b.a.b ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00940000155960.b ENSGT00390000006758.b ENSGT00940000157402 ENSGT00950000182976.a.b ENSGT00440000037417.A ENSGT00940000158268.a ENSGT00390000013482 ENSGT00390000004456 ENSGT00940000156734 ENSGT00730000111983 ENSGT01010000222360.D.b ENSGT00410000028070 ENSGT00940000155391.a ENSGT00390000001443 ENSGT00550000075025 Canis_lupus ANCESTRAL SPECIES 7 ENSGT00530000063822.b ENSGT00530000063822.a.a ENSGT00940000156046 ENSGT00390000001680 ENSGT00940000159310 ENSGT00940000160980 ENSGT00390000018100 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a ENSGT00940000160199 ENSGT00940000153571.b ENSGT00390000016309 ENSGT00390000002169 ENSGT00530000063472.b.b.a.b ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00940000155960.b ENSGT00390000006758.b ENSGT00940000157402 ENSGT00950000182976.a.b ENSGT00440000037417.A ENSGT00940000158268.a ENSGT00390000013482 ENSGT00390000004456 ENSGT00940000156734 ENSGT00730000111983 ENSGT01010000222360.D.b ENSGT00410000028070 ENSGT00940000155391.a ENSGT00390000001443 ENSGT00550000075025 Dog MODERN SPECIES 9 ENSCAFG00845022224 CD44 (ENSCAFG00845022357) PDHX (ENSCAFG00845023240) ENSCAFG00845023357 EHF (ENSCAFG00845023567) ELF5 (ENSCAFG00845023760) CAT (ENSCAFG00845024098) ABTB2 (ENSCAFG00845024235) NAT10 (ENSCAFG00845024338) CAPRIN1 (ENSCAFG00845024554) ENSCAFG00845024754 FBXO3 (ENSCAFG00845024924) ENSCAFG00845025193 C18H11orf91 (ENSCAFG00845025250) KIAA1549L (ENSCAFG00845025341) ENSCAFG00845025562 ##22 HIPK3 (ENSCAFG00845025615) CSTF3 (ENSCAFG00845026044) TCP11L1 (ENSCAFG00845026199) ENSCAFG00845026364 DEPDC7 (ENSCAFG00845026430) QSER1 (ENSCAFG00845026553) PRRG4 (ENSCAFG00845026825) CCDC73 (ENSCAFG00845026876) EIF3M (ENSCAFG00845027029) WT1 (ENSCAFG00845027359) ENSCAFG00845027468 RCN1 (ENSCAFG00845027499) ENSCAFG00845027550 PAX6 (ENSCAFG00845027665) DNAJC24 (ENSCAFG00845028184) Dingo MODERN SPECIES 69 ENSCAFG00020005617 PDHX (ENSCAFG00020005609) APIP (ENSCAFG00020005596) EHF (ENSCAFG00020005591) ELF5 (ENSCAFG00020005583) CAT (ENSCAFG00020005081) ABTB2 (ENSCAFG00020004564) NAT10 (ENSCAFG00020004530) CAPRIN1 (ENSCAFG00020004525) LMO2 (ENSCAFG00020004522) ENSCAFG00020004519 FBXO3 (ENSCAFG00020004513) ENSCAFG00020004510 C11orf91 (ENSCAFG00020004506) KIAA1549L (ENSCAFG00020004434) ENSCAFG00020004425 ##22 ENSCAFG00020004418 HIPK3 (ENSCAFG00020003548) CSTF3 (ENSCAFG00020002715) TCP11L1 (ENSCAFG00020002659) DEPDC7 (ENSCAFG00020002651) QSER1 (ENSCAFG00020002643) PRRG4 (ENSCAFG00020002639) ENSCAFG00020002628 EIF3M (ENSCAFG00020002623) WT1 (ENSCAFG00020002366) ENSCAFG00020002349 RCN1 (ENSCAFG00020002342) ENSCAFG00020002338 PAX6 (ENSCAFG00020002118) ELP4 (ENSCAFG00020002097) Felidae DUPLICATION Felidae DUPLICATION Felidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.a.a ##22 Panthera ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.a.a ##22 Panthera_a ANCESTRAL SPECIES 12 ENSGT00940000161297 ENSGT00390000016293 ENSGT00940000159587 ENSGT01040000240451.a.b.a ENSGT00390000010948 ENSGT00940000157098 ENSGT00940000157309 ENSGT00940000161214 ENSGT00940000154932.A ENSGT00390000013286 ENSGT00940000160095 ENSGT01050000244882.a.a.a.a ENSGT00390000003526 ENSGT00950000183198.c.b.a.t.a ENSGT00950000182824.a.a.a ENSGT00390000008610.a.b.a.a.a.a.a ##22 ENSGT00390000009583 ENSGT00390000018424 ENSGT00390000007890 ENSGT00950000182937.B.b ENSGT00940000157502 ENSGT01000000221699 ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000160401 ENSGT00940000157643 ENSGT00940000155240.A ENSGT00940000163109 ENSGT00390000012979 ENSGT01050000244940.b ENSGT00940000161222 leopard MODERN SPECIES 27 ATP23 (ENSPPRG00000006940) LRIG3 (ENSPPRG00000005844) SLC16A7 (ENSPPRG00000004556) ENSPPRG00000003806 ENSPPRG00000017098 TAFA2 (ENSPPRG00000002926) USP15 (ENSPPRG00000001415) MON2 (ENSPPRG00000000598) ENSPPRG00000015715 PPM1H (ENSPPRG00000014120) AVPR1A (ENSPPRG00000013507) RXYLT1 (ENSPPRG00000012565) ENSPPRG00000011955 SRGAP1 (ENSPPRG00000011479) ENSPPRG00000009845 ENSPPRG00000008524 ##22 KICS2 (ENSPPRG00000008288) C12orf56 (ENSPPRG00000007840) XPOT (ENSPPRG00000005552) TBK1 (ENSPPRG00000005054) RASSF3 (ENSPPRG00000004564) GNS (ENSPPRG00000003802) TBC1D30 (ENSPPRG00000003043) WIF1 (ENSPPRG00000001914) ENSPPRG00000001788 LEMD3 (ENSPPRG00000001191) MSRB3 (ENSPPRG00000000826) HMGA2 (ENSPPRG00000022627) ENSPPRG00000017785 LLPH (ENSPPRG00000017419) TMBIM4 (ENSPPRG00000015870) lion MODERN SPECIES 7 EEF1AKMT3 (ENSPLOG00000008400) TSFM (ENSPLOG00000008446) AVIL (ENSPLOG00000008566) CTDSP2 (ENSPLOG00000008613) ATP23 (ENSPLOG00000008681) LRIG3 (ENSPLOG00000008745) SLC16A7 (ENSPLOG00000008868) TAFA2 (ENSPLOG00000008909) USP15 (ENSPLOG00000009055) MON2 (ENSPLOG00000009437) PPM1H (ENSPLOG00000010670) AVPR1A (ENSPLOG00000010693) RXYLT1 (ENSPLOG00000010730) ENSPLOG00000010772 SRGAP1 (ENSPLOG00000010901) ENSPLOG00000011207 ##22 KICS2 (ENSPLOG00000011238) C12orf56 (ENSPLOG00000011329) XPOT (ENSPLOG00000011399) TBK1 (ENSPLOG00000011663) RASSF3 (ENSPLOG00000012341) ENSPLOG00000012466 GNS (ENSPLOG00000012618) TBC1D30 (ENSPLOG00000012961) WIF1 (ENSPLOG00000013136) ENSPLOG00000013231 LEMD3 (ENSPLOG00000013267) MSRB3 (ENSPLOG00000013315) HMGA2 (ENSPLOG00000013496) ENSPLOG00000013669 LLPH (ENSPLOG00000013704) Cat MODERN SPECIES 238 ATP23 (ENSFCAG00000030243) LRIG3 (ENSFCAG00000006634) SLC16A7 (ENSFCAG00000029220) ENSFCAG00000048816 TAFA2 (ENSFCAG00000014482) USP15 (ENSFCAG00000018475) MON2 (ENSFCAG00000023896) ENSFCAG00000034317 PPM1H (ENSFCAG00000022503) ENSFCAG00000024093 AVPR1A (ENSFCAG00000014363) RXYLT1 (ENSFCAG00000032579) SRGAP1 (ENSFCAG00000019126) ENSFCAG00000024929 ENSFCAG00000047674 ENSFCAG00000033114 ##22 KICS2 (ENSFCAG00000043203) CB4H12orf56 (ENSFCAG00000001146) XPOT (ENSFCAG00000012360) TBK1 (ENSFCAG00000028816) ENSFCAG00000024392 RASSF3 (ENSFCAG00000041229) ENSFCAG00000053635 GNS (ENSFCAG00000000437) TBC1D30 (ENSFCAG00000029543) WIF1 (ENSFCAG00000009978) ENSFCAG00000041114 LEMD3 (ENSFCAG00000019096) MSRB3 (ENSFCAG00000042654) ENSFCAG00000053145 HMGA2 (ENSFCAG00000033840) Felidae ANCESTRAL SPECIES ENSGT00530000063822.a.a ENSGT00940000156046 ENSGT00390000001680 ENSGT00940000159310 ENSGT00940000160980 ENSGT00390000018100 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a ENSGT00860000135900 ENSGT00940000160199 ENSGT00940000153571.b ENSGT00390000016309 ENSGT00390000002169 ENSGT00530000063472.b.b.a.b ENSGT00390000008610.a.b.a.a.a.a.b ##22 ENSGT00940000155960.b ENSGT00390000015489.r ENSGT00390000006758.b ENSGT00940000157402 ENSGT00950000182976.a.b ENSGT00440000037417.A ENSGT00940000158268.a ENSGT00390000013482 ENSGT00390000004456 ENSGT00940000156734 ENSGT00730000111983 ENSGT01010000222360.D.b ENSGT00410000028070 ENSGT00940000155391.a ENSGT00390000001443 Panthera ANCESTRAL SPECIES 13 ENSGT00530000063822.a.a ENSGT00940000156046 ENSGT00390000001680 ENSGT00940000159310 ENSGT00940000160980 ENSGT00390000018100 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a ENSGT00860000135900 ENSGT00940000160199 ENSGT00940000153571.b ENSGT00390000016309 ENSGT00390000002169 ENSGT00530000063472.b.b.a.b ENSGT00390000008610.a.b.a.a.a.a.b ##22 ENSGT00990000213820 ENSGT00940000155960.b ENSGT00390000015489.r ENSGT00390000006758.b ENSGT00940000157402 ENSGT00950000182976.a.b ENSGT00440000037417.A ENSGT00940000158268.a ENSGT00940000164881 ENSGT00390000013482 ENSGT00390000004456 ENSGT00940000156734 ENSGT00730000111983 ENSGT01010000222360.D.b ENSGT00410000028070 Panthera_a ANCESTRAL SPECIES 20 ENSGT00530000063822.a.a ENSGT00940000156046 ENSGT00390000001680 ENSGT00940000159310 ENSGT00940000160980 ENSGT00390000018100 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a ENSGT00860000135900 ENSGT00940000160199 ENSGT00940000153571.b ENSGT00390000016309 ENSGT00390000002169 ENSGT00530000063472.b.b.a.b ENSGT00390000008610.a.b.a.a.a.a.b ##22 ENSGT00990000213820 ENSGT00940000155960.b ENSGT00390000015489.r ENSGT00390000006758.b ENSGT00940000157402 ENSGT00950000182976.a.b ENSGT00440000037417.A ENSGT00940000158268.a ENSGT00390000013482 ENSGT00390000004456 ENSGT00940000156734 ENSGT00730000111983 ENSGT01010000222360.D.b ENSGT00410000028070 ENSGT00940000155391.a leopard MODERN SPECIES 29 KIAA1549L (ENSPPRG00000013161) ENSPPRG00000013781 ##22 HIPK3 (ENSPPRG00000014334) ENSPPRG00000014735 CSTF3 (ENSPPRG00000016852) TCP11L1 (ENSPPRG00000018130) DEPDC7 (ENSPPRG00000019342) QSER1 (ENSPPRG00000024581) PRRG4 (ENSPPRG00000024458) ENSPPRG00000024407 ENSPPRG00000024223 EIF3M (ENSPPRG00000024020) WT1 (ENSPPRG00000022915) ENSPPRG00000022641 ENSPPRG00000000227 RCN1 (ENSPPRG00000000429) PAX6 (ENSPPRG00000008832) Felidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.b ##22 Cat MODERN SPECIES 242 PSD (ENSFCAG00000001243) FBXL15 (ENSFCAG00000001244) CUEDC2 (ENSFCAG00000001245) CD2H10orf95 (ENSFCAG00000042728) MFSD13A (ENSFCAG00000023881) ACTR1A (ENSFCAG00000001248) SUFU (ENSFCAG00000001249) TRIM8 (ENSFCAG00000028572) ARL3 (ENSFCAG00000001251) WBP1L (ENSFCAG00000042551) CYP17A1 (ENSFCAG00000001254) ENSFCAG00000041677 AS3MT (ENSFCAG00000030999) CNNM2 (ENSFCAG00000022183) NT5C2 (ENSFCAG00000013705) ENSFCAG00000037878 ##22 INA (ENSFCAG00000025885) PCGF6 (ENSFCAG00000026427) TAF5 (ENSFCAG00000002382) ENSFCAG00000002383 PDCD11 (ENSFCAG00000002384) CALHM2 (ENSFCAG00000002386) CALHM1 (ENSFCAG00000002387) CALHM3 (ENSFCAG00000002388) NEURL1 (ENSFCAG00000026091) SH3PXD2A (ENSFCAG00000002390) STN1 (ENSFCAG00000030378) SLK (ENSFCAG00000004298) COL17A1 (ENSFCAG00000004299) SFR1 (ENSFCAG00000028988) CFAP43 (ENSFCAG00000011533) Panthera ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.b ##22 Panthera_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.b ##22 lion MODERN SPECIES 2 DLX6 (ENSPLOG00000018415) ENSPLOG00000018456 DLX5 (ENSPLOG00000018485) SDHAF3 (ENSPLOG00000018540) TAC1 (ENSPLOG00000018609) ASNS (ENSPLOG00000018770) C1GALT1 (ENSPLOG00000018883) COL28A1 (ENSPLOG00000018923) MIOS (ENSPLOG00000019131) RPA3 (ENSPLOG00000019171) UMAD1 (ENSPLOG00000019213) GLCCI1 (ENSPLOG00000019253) ICA1 (ENSPLOG00000019284) NXPH1 (ENSPLOG00000019464) ENSPLOG00000019496 ENSPLOG00000019529 ##22 PHF14 (ENSPLOG00000019605) THSD7A (ENSPLOG00000019788) TMEM106B (ENSPLOG00000020063) VWDE (ENSPLOG00000020102) ENSPLOG00000020288 ENSPLOG00000020306 SCIN (ENSPLOG00000020369) ARL4A (ENSPLOG00000020466) ETV1 (ENSPLOG00000020495) DGKB (ENSPLOG00000020672) ENSPLOG00000021015 AGMO (ENSPLOG00000021051) MEOX2 (ENSPLOG00000021107) CRPPA (ENSPLOG00000021148) ENSPLOG00000021190 leopard MODERN SPECIES 33 CUEDC2 (ENSPPRG00000012133) C10orf95 (ENSPPRG00000019037) MFSD13A (ENSPPRG00000011829) ACTR1A (ENSPPRG00000011443) SUFU (ENSPPRG00000010512) ENSPPRG00000009259 TRIM8 (ENSPPRG00000008416) ARL3 (ENSPPRG00000007715) SFXN2 (ENSPPRG00000007450) WBP1L (ENSPPRG00000007200) CYP17A1 (ENSPPRG00000006800) BORCS7 (ENSPPRG00000005710) AS3MT (ENSPPRG00000004722) CNNM2 (ENSPPRG00000003743) NT5C2 (ENSPPRG00000002954) ENSPPRG00000002375 ##22 ENSPPRG00000000418 INA (ENSPPRG00000000231) PCGF6 (ENSPPRG00000021382) TAF5 (ENSPPRG00000019671) ENSPPRG00000017518 PDCD11 (ENSPPRG00000015133) CALHM2 (ENSPPRG00000012922) CALHM1 (ENSPPRG00000011899) CALHM3 (ENSPPRG00000011663) NEURL1 (ENSPPRG00000011450) SH3PXD2A (ENSPPRG00000011103) STN1 (ENSPPRG00000010476) SLK (ENSPPRG00000009662) COL17A1 (ENSPPRG00000009059) SFR1 (ENSPPRG00000000336) Laurasiatheria_c ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Chiroptera ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Microchiroptera ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 23 CNOT6L (ENSRFEG00010000632) ENSRFEG00010000688 FRAS1 (ENSRFEG00010000743) ANXA3 (ENSRFEG00010000942) BMP2K (ENSRFEG00010000981) PAQR3 (ENSRFEG00010001055) NAA11 (ENSRFEG00010001082) GK2 (ENSRFEG00010001093) ANTXR2 (ENSRFEG00010001113) PRDM8 (ENSRFEG00010001150) FGF5 (ENSRFEG00010001172) CFAP299 (ENSRFEG00010001198) BMP3 (ENSRFEG00010001224) PRKG2 (ENSRFEG00010001249) RASGEF1B (ENSRFEG00010001308) ENSRFEG00010001394 ##22 HNRNPD (ENSRFEG00010001426) HNRNPDL (ENSRFEG00010001497) ENOPH1 (ENSRFEG00010001560) TMEM150C (ENSRFEG00010001626) SCD5 (ENSRFEG00010001652) SEC31A (ENSRFEG00010001874) ENSRFEG00010002414 LIN54 (ENSRFEG00010002453) COPS4 (ENSRFEG00010002518) ENSRFEG00010002549 COQ2 (ENSRFEG00010002560) HPSE (ENSRFEG00010002595) HELQ (ENSRFEG00010002668) ENSRFEG00010002735 ABRAXAS1 (ENSRFEG00010002770) Greater horseshoe bat MODERN SPECIES 21 FILIP1 (ENSRFEG00010015930) TMEM30A (ENSRFEG00010015749) ENSRFEG00010015634 COL12A1 (ENSRFEG00010015379) ENSRFEG00010015345 ENSRFEG00010015285 CD109 (ENSRFEG00010015120) SLC17A5 (ENSRFEG00010014929) ENSRFEG00010014869 MTO1 (ENSRFEG00010014806) CGAS (ENSRFEG00010014633) DDX43 (ENSRFEG00010014367) OOEP (ENSRFEG00010014295) ENSRFEG00010014247 DPPA5 (ENSRFEG00010014186) ENSRFEG00010014111 ##22 KCNQ5 (ENSRFEG00010012334) RIMS1 (ENSRFEG00010010803) OGFRL1 (ENSRFEG00010010417) B3GAT2 (ENSRFEG00010010262) SMAP1 (ENSRFEG00010010074) SDHAF4 (ENSRFEG00010010023) FAM135A (ENSRFEG00010009732) COL9A1 (ENSRFEG00010009212) COL19A1 (ENSRFEG00010008757) ENSRFEG00010008697 LMBRD1 (ENSRFEG00010008627) ADGRB3 (ENSRFEG00010008203) ENSRFEG00010008144 PHF3 (ENSRFEG00010007114) PTP4A1 (ENSRFEG00010007023) Artiodactyla ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Suina ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Pig MODERN SPECIES BSPRY (ENSSSCG00000021173) WDR31 (ENSSSCG00000020987) RNF183 (ENSSSCG00000027688) PRPF4 (ENSSSCG00000024648) CDC26 (ENSSSCG00000033177) SLC31A1 (ENSSSCG00000034278) SLC31A2 (ENSSSCG00000023714) FKBP15 (ENSSSCG00000005477) ENSSSCG00000005475 ZNF883 (ENSSSCG00000047560) SAL1 (ENSSSCG00000005474) ENSSSCG00000005473 SLC46A2 (ENSSSCG00000005472) SNX30 (ENSSSCG00000005471) INIP (ENSSSCG00000026194) ENSSSCG00000060411 ##22 KIAA1958 (ENSSSCG00000005469) HSDL2 (ENSSSCG00000005467) PTBP3 (ENSSSCG00000005466) SUSD1 (ENSSSCG00000005465) UGCG (ENSSSCG00000022780) SHOC1 (ENSSSCG00000005463) GNG10 (ENSSSCG00000046439) DNAJC25 (ENSSSCG00000005460) ENSSSCG00000042365 PTGR1 (ENSSSCG00000021386) ZNF483 (ENSSSCG00000037744) ENSSSCG00000045611 ECPAS (ENSSSCG00000005459) OR2K2 (ENSSSCG00000005458) ENSSSCG00000044924 Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Camelidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Arabian camel MODERN SPECIES 1 PPME1 (ENSCDRG00005002613) #7 P4HA3 (ENSCDRG00005002632) #8 PGM2L1 (ENSCDRG00005002666) #9 KCNE3 (ENSCDRG00005002694) #10 LIPT2 (ENSCDRG00005002708) #11 ENSCDRG00005002729 #12 CHRDL2 (ENSCDRG00005002767) #13 RNF169 (ENSCDRG00005002806) #14 XRRA1 (ENSCDRG00005002862) #15 SPCS2 (ENSCDRG00005002935) #16 NEU3 (ENSCDRG00005002967) #17 OR2AT4 (ENSCDRG00005002973) #18 ENSCDRG00005002994 SLCO2B1 (ENSCDRG00005003073) #19 ARRB1 (ENSCDRG00005003177) #21 ENSCDRG00005003279 ##22 KLHL35 (ENSCDRG00005003311) #24 GDPD5 (ENSCDRG00005003371) #25 SERPINH1 (ENSCDRG00005003481) #26 MAP6 (ENSCDRG00005003550) #27 MOGAT2 (ENSCDRG00005003678) #28 ENSCDRG00005003755 DGAT2 (ENSCDRG00005003787) #29 UVRAG (ENSCDRG00005003820) #30 WNT11 (ENSCDRG00005003887) #31 THAP12 (ENSCDRG00005003929) #32 GVQW3 (ENSCDRG00005003950) EMSY (ENSCDRG00005004068) #33 LRRC32 (ENSCDRG00005004741) #34 ENSCDRG00005004762 ENSCDRG00005004792 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Cetacea ANCESTRAL SPECIES 1 ENSGT00940000159225 ENSGT00940000153727.a ENSGT00940000153727.b ENSGT00390000006178 ENSGT00390000008104 ENSGT00390000005689 ENSGT00950000182827.F ENSGT00390000007844 ENSGT00390000000002.a.a.b ENSGT00390000001803 ENSGT00940000163328 ENSGT00940000153768.b ENSGT00940000160970 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00500000045016 ENSGT00390000001137 ENSGT00950000183162.a.a ENSGT00960000191809 ENSGT00940000158778 ENSGT00940000159674 ENSGT00940000154108.a ENSGT00940000153169.A.b.a.t ENSGT00390000008582 ENSGT00390000006836 ENSGT00400000023549 ENSGT00940000160925 ENSGT00390000007817 ENSGT00730000111496 ENSGT00390000002716 Blue whale DUPLICATION Blue whale MODERN SPECIES 14 DND1 (ENSBMSG00010001404) WDR55 (ENSBMSG00010001394) IK (ENSBMSG00010001362) NDUFA2 (ENSBMSG00010001334) TMCO6 (ENSBMSG00010001310) CD14 (ENSBMSG00010001298) ENSBMSG00010001283 SLC35A4 (ENSBMSG00010001275) APBB3 (ENSBMSG00010001042) SRA1 (ENSBMSG00010000944) EIF4EBP3 (ENSBMSG00010000927) ANKHD1 (ENSBMSG00010000466) SLC4A9 (ENSBMSG00010000180) HBEGF (ENSBMSG00010000125) PFDN1 (ENSBMSG00010000082) ENSBMSG00010004032 ##22 CYSTM1 (ENSBMSG00010003980) IGIP (ENSBMSG00010003972) PURA (ENSBMSG00010003965) ENSBMSG00010003957 NRG2 (ENSBMSG00010003458) PSD2 (ENSBMSG00010003400) CXXC5 (ENSBMSG00010003384) ENSBMSG00010003376 UBE2D2 (ENSBMSG00010003349) STING1 (ENSBMSG00010003311) SMIM33 (ENSBMSG00010003288) ECSCR (ENSBMSG00010003238) DNAJC18 (ENSBMSG00010003221) SPATA24 (ENSBMSG00010003205) PROB1 (ENSBMSG00010003195) Blue whale MODERN SPECIES 40 ENSBMSG00010014991 BCLAF3 (ENSBMSG00010015038) MAP7D2 (ENSBMSG00010015124) ENSBMSG00010015217 RPS6KA3 (ENSBMSG00010015348) ENSBMSG00010015592 ENSBMSG00010015603 ENSBMSG00010015623 CNKSR2 (ENSBMSG00010015971) KLHL34 (ENSBMSG00010021180) SMPX (ENSBMSG00010021188) ENSBMSG00010021193 ENSBMSG00010021206 PHEX (ENSBMSG00010021225) ENSBMSG00010021244 ENSBMSG00010021247 ##22 ENSBMSG00010021259 ENSBMSG00010021262 ENSBMSG00010021269 PTCHD1 (ENSBMSG00010021280) PRDX4 (ENSBMSG00010021294) ENSBMSG00010021309 ENSBMSG00010021329 SAT1 (ENSBMSG00010021343) APOO (ENSBMSG00010021360) ENSBMSG00010021365 CXorf58 (ENSBMSG00010021372) KLHL15 (ENSBMSG00010021380) ENSBMSG00010021384 EIF2S3 (ENSBMSG00010021391) ENSBMSG00010021408 Blue whale MODERN SPECIES 2 PGC (ENSBMSG00010010276) FRS3 (ENSBMSG00010010261) PRICKLE4 (ENSBMSG00010010242) ENSBMSG00010010229 USP49 (ENSBMSG00010010213) ENSBMSG00010010206 ENSBMSG00010010194 BYSL (ENSBMSG00010010176) CCND3 (ENSBMSG00010010130) TAF8 (ENSBMSG00010010093) C6orf132 (ENSBMSG00010010068) GUCA1ANB (ENSBMSG00010010047) GUCA1A (ENSBMSG00010010030) ENSBMSG00010010003 TRERF1 (ENSBMSG00010009880) ENSBMSG00010009836 ##22 ENSBMSG00010009818 ENSBMSG00010009795 ENSBMSG00010009780 PRPH2 (ENSBMSG00010009768) TBCC (ENSBMSG00010009756) BICRAL (ENSBMSG00010009740) ENSBMSG00010009726 ENSBMSG00010009715 ENSBMSG00010009706 PTCRA (ENSBMSG00010009694) CNPY3 (ENSBMSG00010009680) GNMT (ENSBMSG00010009660) PEX6 (ENSBMSG00010009640) PPP2R5D (ENSBMSG00010009599) ENSBMSG00010009576 Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000159225 ENSGT00940000153727.a ENSGT00940000153727.b ENSGT00390000006178 ENSGT00390000008104 ENSGT00390000005689 ENSGT00950000182827.F ENSGT00390000007844 ENSGT00390000000002.a.a.b ENSGT00390000001803 ENSGT00940000163328 ENSGT00940000153768.b ENSGT00940000160970 ENSGT00940000156901.A ENSGT00390000009786 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00500000045016 ENSGT00390000001137 ENSGT00950000183162.a.a ENSGT00940000158778 ENSGT00940000159674 ENSGT00940000154108.a ENSGT00390000002565.z ENSGT00940000153169.A.b.a.s.a ENSGT00940000153169.A.b.a.t ENSGT00390000008582 ENSGT00390000006836 ENSGT00400000023549 ENSGT00940000160925 ENSGT00390000007817 ENSGT00730000111496 Odontoceti_a ANCESTRAL SPECIES 20 ENSGT00940000155886 ENSGT01010000222890.b ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000164207 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330.r ENSGT00950000183121.b.b.b.b ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT01100000263525.a.b.b.c.a ENSGT00550000074801.h.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 Odontoceti_b ANCESTRAL SPECIES 22 ENSGT00940000159562 ENSGT00940000155886 ENSGT01010000222890.b ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00940000172088 ENSGT00940000157313 ENSGT00940000164207 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00940000159407.n ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330.r ENSGT00950000183121.b.b.b.b ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT01100000263525.a.b.b.c.a ENSGT00550000074801.h.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.c ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 Monodontidae ANCESTRAL SPECIES 30 ENSGT00940000160729.b ENSGT01010000222890.b ENSGT00390000002034.j ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256 ENSGT00940000159370 ENSGT00390000009113.a.a.k.b ENSGT00390000009724.l.y.b ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00940000172088 ENSGT00940000157313 ENSGT00940000164207 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00940000159407.n ENSGT00940000159951.e.b.b.b ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330.r ENSGT00950000183121.b.b.b.b ENSGT00530000063666.b ENSGT00510000048637 ENSGT00940000159116 ENSGT01100000263525.a.b.b.c.a ENSGT00550000074801.h.b ENSGT00940000158684 ENSGT00390000013549.a.b.b.o.a.c ENSGT01030000234646.B.a.b ENSGT00940000156040 Beluga whale MODERN SPECIES 41 ENSDLEG00000020970 ENSDLEG00000020972 BCLAF3 (ENSDLEG00000020974) MAP7D2 (ENSDLEG00000020985) EIF1AX (ENSDLEG00000021017) RPS6KA3 (ENSDLEG00000021020) ENSDLEG00000021027 ENSDLEG00000021028 CNKSR2 (ENSDLEG00000021034) SMPX (ENSDLEG00000021052) ENSDLEG00000021055 MBTPS2 (ENSDLEG00000021061) SMS (ENSDLEG00000021074) PHEX (ENSDLEG00000003589) ENSDLEG00000003596 ENSDLEG00000003601 ##22 ENSDLEG00000003610 ENSDLEG00000003616 PTCHD1 (ENSDLEG00000003624) PRDX4 (ENSDLEG00000003633) ENSDLEG00000003639 ENSDLEG00000003653 SAT1 (ENSDLEG00000003657) APOO (ENSDLEG00000003665) CUNHXorf58 (ENSDLEG00000003672) KLHL15 (ENSDLEG00000003676) GNG5B (ENSDLEG00000003682) EIF2S3 (ENSDLEG00000003688) ZFX (ENSDLEG00000003710) ENSDLEG00000003734 ENSDLEG00000003740 Narwhal MODERN SPECIES 309 ENSMMNG00015011630 BCLAF3 (ENSMMNG00015011642) MAP7D2 (ENSMMNG00015011661) ENSMMNG00015011692 RPS6KA3 (ENSMMNG00015011742) ENSMMNG00015011921 ENSMMNG00015011934 CNKSR2 (ENSMMNG00015012238) KLHL34 (ENSMMNG00015012985) SMPX (ENSMMNG00015012992) ENSMMNG00015012997 MBTPS2 (ENSMMNG00015013011) ENSMMNG00015013042 ENSMMNG00015013065 PHEX (ENSMMNG00015013104) ENSMMNG00015013143 ##22 ENSMMNG00015013158 ENSMMNG00015013169 PTCHD1 (ENSMMNG00015013178) PRDX4 (ENSMMNG00015013185) ACOT9 (ENSMMNG00015013205) SAT1 (ENSMMNG00015013236) APOO (ENSMMNG00015013272) ENSMMNG00015013284 CXorf58 (ENSMMNG00015013294) KLHL15 (ENSMMNG00015013307) GNG5B (ENSMMNG00015013314) EIF2S3 (ENSMMNG00015013327) ENSMMNG00015013361 ENSMMNG00015013392 PDK3 (ENSMMNG00015013411) Vaquita MODERN SPECIES 34 ENSPSNG00000021512 BCLAF3 (ENSPSNG00000021539) MAP7D2 (ENSPSNG00000021591) EIF1AX (ENSPSNG00000021671) RPS6KA3 (ENSPSNG00000021768) ENSPSNG00000021849 ENSPSNG00000021866 CNKSR2 (ENSPSNG00000022151) KLHL34 (ENSPSNG00000022394) SMPX (ENSPSNG00000022398) ENSPSNG00000022401 ENSPSNG00000022411 ENSPSNG00000022423 PHEX (ENSPSNG00000022431) ENSPSNG00000022444 ENSPSNG00000022447 ##22 ENSPSNG00000022455 ENSPSNG00000022459 ENSPSNG00000022464 ENSPSNG00000022466 PTCHD1 (ENSPSNG00000022471) PRDX4 (ENSPSNG00000022478) ACOT9 (ENSPSNG00000022488) SAT1 (ENSPSNG00000022498) APOO (ENSPSNG00000022508) CXorf58 (ENSPSNG00000013347) KLHL15 (ENSPSNG00000013480) ENSPSNG00000013529 EIF2S3 (ENSPSNG00000013588) ENSPSNG00000013747 ENSPSNG00000014119 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 13 PDHA1 (ENSPCTG00005011695) SH3KBP1 (ENSPCTG00005011856) BCLAF3 (ENSPCTG00005012120) MAP7D2 (ENSPCTG00005012303) EIF1AX (ENSPCTG00005012927) RPS6KA3 (ENSPCTG00005013127) ENSPCTG00005013565 ENSPCTG00005013591 CNKSR2 (ENSPCTG00005013662) KLHL34 (ENSPCTG00005014125) SMPX (ENSPCTG00005014144) ENSPCTG00005014208 SMS (ENSPCTG00005014394) PHEX (ENSPCTG00005014479) ENSPCTG00005014734 ENSPCTG00005014773 ##22 ENSPCTG00005015143 PTCHD1 (ENSPCTG00005015207) PRDX4 (ENSPCTG00005015287) ACOT9 (ENSPCTG00005015365) SAT1 (ENSPCTG00005015519) APOO (ENSPCTG00005015655) ENSPCTG00005015710 CXorf58 (ENSPCTG00005015774) KLHL15 (ENSPCTG00005015891) ENSPCTG00005015923 EIF2S3 (ENSPCTG00005015958) ENSPCTG00005016340 ZFX (ENSPCTG00005016407) ENSPCTG00005016632 PDK3 (ENSPCTG00005016662) Sperm whale MODERN SPECIES 19 HARS2 (ENSPCTG00005000529) HARS (ENSPCTG00005000404) DND1 (ENSPCTG00005020106) WDR55 (ENSPCTG00005020077) IK (ENSPCTG00005019904) NDUFA2 (ENSPCTG00005019842) TMCO6 (ENSPCTG00005019801) CD14 (ENSPCTG00005019771) SLC35A4 (ENSPCTG00005019755) ENSPCTG00005019730 APBB3 (ENSPCTG00005019171) SRA1 (ENSPCTG00005019114) EIF4EBP3 (ENSPCTG00005019077) ANKHD1 (ENSPCTG00005018994) PFDN1 (ENSPCTG00005018921) ENSPCTG00005018819 ##22 CYSTM1 (ENSPCTG00005018797) IGIP (ENSPCTG00005018778) PURA (ENSPCTG00005018764) NRG2 (ENSPCTG00005017958) ENSPCTG00005017724 ENSPCTG00005017685 MATR3 (ENSPCTG00005017500) PAIP2 (ENSPCTG00005017464) SLC23A1 (ENSPCTG00005017170) ETF1 (ENSPCTG00005017032) HSPA9 (ENSPCTG00005016976) LRRTM2 (ENSPCTG00005016894) CTNNA1 (ENSPCTG00005016795) KDM3B (ENSPCTG00005016421) FAM53C (ENSPCTG00005016349) Pecora ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 27 ENSCHYG00000019831 ENSCHYG00000019726 SULT2A1 (ENSCHYG00000019298) CRX (ENSCHYG00000019234) ENSCHYG00000019212 NOP53 (ENSCHYG00000018854) EHD2 (ENSCHYG00000018732) BICRA (ENSCHYG00000018651) ZNF541 (ENSCHYG00000018471) NAPA (ENSCHYG00000018302) KPTN (ENSCHYG00000018196) SLC8A2 (ENSCHYG00000018134) MEIS3 (ENSCHYG00000017783) DHX34 (ENSCHYG00000017576) C5AR2 (ENSCHYG00000017549) ENSCHYG00000017494 ##22 C5AR1 (ENSCHYG00000017464) INAFM1 (ENSCHYG00000017434) ENSCHYG00000017388 CCDC9 (ENSCHYG00000017076) ENSCHYG00000017008 SAE1 (ENSCHYG00000016642) ZC3H4 (ENSCHYG00000016192) TMEM160 (ENSCHYG00000016093) NPAS1 (ENSCHYG00000015977) ARHGAP35 (ENSCHYG00000015852) AP2S1 (ENSCHYG00000015644) SLC1A5 (ENSCHYG00000015481) FKRP (ENSCHYG00000015463) STRN4 (ENSCHYG00000015201) PRKD2 (ENSCHYG00000015014) Yarkand deer MODERN SPECIES 4 KLHL25 (ENSCHYG00000007883) AKAP13 (ENSCHYG00000006991) SV2B (ENSCHYG00000006806) ENSCHYG00000008211 SLCO3A1 (ENSCHYG00000008092) ENSCHYG00000008061 ST8SIA2 (ENSCHYG00000008019) FAM174B (ENSCHYG00000007984) ENSCHYG00000007955 CHD2 (ENSCHYG00000007751) RGMA (ENSCHYG00000007668) MCTP2 (ENSCHYG00000007330) ENSCHYG00000007293 ENSCHYG00000007283 ENSCHYG00000007264 ENSCHYG00000007241 ##22 ARRDC4 (ENSCHYG00000007186) ENSCHYG00000007128 ENSCHYG00000007085 IGF1R (ENSCHYG00000006955) SYNM (ENSCHYG00000006912) TTC23 (ENSCHYG00000006873) LRRC28 (ENSCHYG00000006817) MEF2A (ENSCHYG00000006733) ENSCHYG00000006649 ADAMTS17 (ENSCHYG00000006512) CERS3 (ENSCHYG00000006461) LINS1 (ENSCHYG00000006425) ASB7 (ENSCHYG00000006398) ENSCHYG00000006386 ALDH1A3 (ENSCHYG00000006301) Percora_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Bovidae ANCESTRAL SPECIES 26 ENSGT00940000160263 ENSGT00940000157749 ENSGT00910000144505 ENSGT00390000007153.a.a ENSGT00390000001801 ENSGT00730000111052 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a ENSGT01070000254103 ENSGT00940000154187.a.b ENSGT00940000157512 ENSGT00940000154598.ac.a ENSGT00940000159547.d ENSGT00390000013228.e.b ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00730000111450.g.b ENSGT00940000155469 ENSGT00940000160746 ENSGT00390000018047 ENSGT00940000160025 ENSGT00940000158009 ENSGT00390000012189 ENSGT00390000009802.b ENSGT00390000009802.a ENSGT00940000154766.a.a ENSGT00940000155533.d ENSGT00940000154952.a.b ENSGT00940000154574.c ENSGT00500000044852.a ENSGT00390000012731.a.a Caprinae ANCESTRAL SPECIES 14 ENSGT00950000183043.a.b.b.a.a.a.b.j ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484 ENSGT00940000159053 ENSGT00940000158196 ENSGT00950000182964.a.b.a ENSGT00940000159594 ENSGT00390000013795 ENSGT00490000043356.b ENSGT00950000182971.C ENSGT00950000182870.a.a.a.b ENSGT01050000244887.A.b.b ENSGT00940000161260 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00950000182925.D.a.a.b.a.l ENSGT00940000159128 ENSGT00940000162955 ENSGT00900000143482 ENSGT00410000025793.b ENSGT00390000007901 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000158875 ENSGT01010000222336.a.a.b.b ENSGT01010000222336.a.a.b.a ENSGT00390000004279 ENSGT00940000161823 ENSGT00950000182987.c.b ENSGT00500000045018 Goat DUPLICATION Goat MODERN SPECIES 27 NFIL3 (ENSCHIG00000009349) AUH (ENSCHIG00000016972) SYK (ENSCHIG00000012192) DIRAS2 (ENSCHIG00000010043) ENSCHIG00000015279 GADD45G (ENSCHIG00000016621) SEMA4D (ENSCHIG00000000579) ENSCHIG00000003164 SECISBP2 (ENSCHIG00000010657) CKS2 (ENSCHIG00000022256) SHC3 (ENSCHIG00000010693) S1PR3 (ENSCHIG00000022209) ENSCHIG00000013230 NXNL2 (ENSCHIG00000015108) ENSCHIG00000024607 ENSCHIG00000015952 ##22 ENSCHIG00000002451 ENSCHIG00000020095 CDK20 (ENSCHIG00000012924) ENSCHIG00000024181 ENSCHIG00000003968 MSANTD3 (ENSCHIG00000023805) TMEFF1 (ENSCHIG00000017109) CAVIN4 (ENSCHIG00000009596) PLPPR1 (ENSCHIG00000010910) ENSCHIG00000024836 BAAT (ENSCHIG00000024449) MRPL50 (ENSCHIG00000015308) ZNF189 (ENSCHIG00000016152) ALDOB (ENSCHIG00000003090) PGAP4 (ENSCHIG00000008870) Goat MODERN SPECIES 2 RMDN2 (ENSCHIG00000022119) CDC42EP3 (ENSCHIG00000004518) QPCT (ENSCHIG00000016909) PRKD3 (ENSCHIG00000009816) NDUFAF7 (ENSCHIG00000024822) CEBPZ (ENSCHIG00000020789) ENSCHIG00000021358 SULT6B1 (ENSCHIG00000024550) EIF2AK2 (ENSCHIG00000016319) GPATCH11 (ENSCHIG00000010173) HEATR5B (ENSCHIG00000024849) STRN (ENSCHIG00000024807) VIT (ENSCHIG00000013685) FEZ2 (ENSCHIG00000023554) CRIM1 (ENSCHIG00000010023) ENSCHIG00000021473 ##22 ENSCHIG00000022305 ENSCHIG00000009886 ENSCHIG00000026285 RASGRP3 (ENSCHIG00000008963) LTBP1 (ENSCHIG00000024351) ENSCHIG00000008282 ENSCHIG00000022577 TTC27 (ENSCHIG00000017374) BIRC6 (ENSCHIG00000008751) YIPF4 (ENSCHIG00000026569) NLRC4 (ENSCHIG00000012340) SLC30A6 (ENSCHIG00000024551) SPAST (ENSCHIG00000015378) ENSCHIG00000021921 ENSCHIG00000021755 Goat MODERN SPECIES 12 ENSCHIG00000016264 ENSCHIG00000021748 ENSCHIG00000022146 CDH9 (ENSCHIG00000011369) ENSCHIG00000008209 CDH10 (ENSCHIG00000024356) ENSCHIG00000019322 ENSCHIG00000009895 CDH12 (ENSCHIG00000014575) ENSCHIG00000017981 ENSCHIG00000024979 ENSCHIG00000010974 CDH18 (ENSCHIG00000020499) ENSCHIG00000019812 ENSCHIG00000000477 ENSCHIG00000012577 ##22 BASP1 (ENSCHIG00000006852) ENSCHIG00000010404 MYO10 (ENSCHIG00000023439) RETREG1 (ENSCHIG00000021819) ZNF622 (ENSCHIG00000007951) MARCHF11 (ENSCHIG00000018244) FBXL7 (ENSCHIG00000011704) ANKH (ENSCHIG00000019071) OTULIN (ENSCHIG00000021689) OTULINL (ENSCHIG00000000624) TRIO (ENSCHIG00000016556) ENSCHIG00000016462 DNAH5 (ENSCHIG00000021054) CTNND2 (ENSCHIG00000013482) DAP (ENSCHIG00000018806) Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 11 SPTLC1 (ENSOARG00020000576) ROR2 (ENSOARG00020000547) NFIL3 (ENSOARG00020000532) AUH (ENSOARG00020000459) SYK (ENSOARG00020000234) DIRAS2 (ENSOARG00020004255) ENSOARG00020004199 ENSOARG00020004185 GADD45G (ENSOARG00020004157) SEMA4D (ENSOARG00020003886) CKS2 (ENSOARG00020003844) ENSOARG00020003826 SHC3 (ENSOARG00020003742) S1PR3 (ENSOARG00020003683) NXNL2 (ENSOARG00020003654) ENSOARG00020003637 ##22 ENSOARG00020003604 ENSOARG00020003563 CDK20 (ENSOARG00020003277) ENSOARG00020003147 MSANTD3-TMEFF1 (ENSOARG00020003065) CAVIN4 (ENSOARG00020003029) PLPPR1 (ENSOARG00020003000) MRPL50 (ENSOARG00020002978) ZNF189 (ENSOARG00020002955) ALDOB (ENSOARG00020002927) PGAP4 (ENSOARG00020002921) RNF20 (ENSOARG00020002897) GRIN3A (ENSOARG00020002876) ENSOARG00020002855 SMC2 (ENSOARG00020002804) Rambouillet Sheep MODERN SPECIES 7 ENSOARG00020012304 ENSOARG00020012362 ENSOARG00020012418 ENSOARG00020012463 ENSOARG00020012480 ENSOARG00020012649 CDH9 (ENSOARG00020012679) CDH10 (ENSOARG00020012850) ENSOARG00020013037 CDH12 (ENSOARG00020013109) ENSOARG00020013424 ENSOARG00020013447 CDH18 (ENSOARG00020013503) ENSOARG00020013600 ENSOARG00020013658 ENSOARG00020013700 ##22 ENSOARG00020013742 MYO10 (ENSOARG00020013822) RETREG1 (ENSOARG00020014626) ZNF622 (ENSOARG00020014823) MARCHF11 (ENSOARG00020014889) FBXL7 (ENSOARG00020014968) ANKH (ENSOARG00020015114) OTULIN (ENSOARG00020015362) OTULINL (ENSOARG00020015405) TRIO (ENSOARG00020015605) DNAH5 (ENSOARG00020019327) ENSOARG00020019873 CTNND2 (ENSOARG00020019950) ENSOARG00020020806 DAP (ENSOARG00020020846) Bovinae ANCESTRAL SPECIES 14 ENSGT00950000183043.a.b.b.a.a.a.b.j ENSGT00990000210271 ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484.q.a ENSGT00940000159053 ENSGT00940000158196 ENSGT00950000182964.a.b.a ENSGT00940000159594 ENSGT00490000043356.b ENSGT00950000182971.C ENSGT00950000182870.a.a.a.b ENSGT01050000244887.A.b.b ENSGT00940000161260 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00950000182925.D.a.a.b.a.l ENSGT00940000159128 ENSGT00940000162955 ENSGT00900000143482 ENSGT00410000025793.b ENSGT00390000007901 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000158875 ENSGT01010000222336.a.a.b.b ENSGT00390000004279 ENSGT00940000161823 ENSGT00950000182987.c.b ENSGT00500000045018 ENSGT00390000002866.b American bison MODERN SPECIES 3127 ENSBBBG00000001136 GADD45G (ENSBBBG00000001141) SEMA4D (ENSBBBG00000001159) SECISBP2 (ENSBBBG00000003662) CKS2 (ENSBBBG00000007495) SHC3 (ENSBBBG00000014827) S1PR3 (ENSBBBG00000003646) NXNL2 (ENSBBBG00000014798) ENSBBBG00000014793 ENSBBBG00000007901 ##22 ENSBBBG00000003639 ENSBBBG00000003586 CDK20 (ENSBBBG00000014763) ENSBBBG00000003573 ENSBBBG00000009056 ENSBBBG00000003569 MSANTD3 (ENSBBBG00000007409) TMEFF1 (ENSBBBG00000014680) CAVIN4 (ENSBBBG00000014670) PLPPR1 (ENSBBBG00000014654) ENSBBBG00000014607 MRPL50 (ENSBBBG00000003370) ZNF189 (ENSBBBG00000003365) ALDOB (ENSBBBG00000003356) PGAP4 (ENSBBBG00000014452) Bos ANCESTRAL SPECIES 10 ENSGT00950000183043.a.b.b.a.a.a.b.j ENSGT00990000210271 ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484.q.a ENSGT00940000159053 ENSGT00940000158196 ENSGT00950000182964.a.b.a ENSGT00940000159594 ENSGT00490000043356.b ENSGT00950000182971.C ENSGT00950000182870.a.a.a.b ENSGT01050000244887.A.b.b ENSGT00940000161260 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00950000182925.D.a.a.b.a.l ENSGT00940000159128 ENSGT00940000162955 ENSGT00900000143482 ENSGT00410000025793.b ENSGT00390000007901 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000158875 ENSGT01010000222336.a.a.b.b ENSGT00390000004279 ENSGT00940000161823 ENSGT00950000182987.c.b ENSGT00500000045018 ENSGT00390000002866.b Bos_a ANCESTRAL SPECIES 20 ENSGT00950000183043.a.b.b.a.a.a.b.j ENSGT00990000210271 ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484.q.a ENSGT00940000159053 ENSGT00940000158196 ENSGT00950000182964.a.b.a ENSGT00940000159594 ENSGT00490000043356.b ENSGT00950000182971.C ENSGT00950000182870.a.a.a.b ENSGT01050000244887.A.b.b ENSGT00940000161260 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00950000182925.D.a.a.b.a.l ENSGT00940000159128 ENSGT00940000162955 ENSGT00900000143482 ENSGT00410000025793.b ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000158875 ENSGT01010000222336.a.a.b.b ENSGT00390000004279 ENSGT00940000161823 ENSGT00950000182987.c.b ENSGT00390000002866.b ENSGT00940000158571 ENSGT00730000111075.a Wild yak MODERN SPECIES 683 NXNL2 (ENSBMUG00000022855) ENSBMUG00000022847 ##22 ENSBMUG00000022836 ENSBMUG00000022834 Bos_b ANCESTRAL SPECIES 89 ENSGT00390000013228.e.b.b ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00960000191761 Hybrid Bos Indicus MODERN SPECIES 27 NFIL3 (ENSBIXG00005015529) ENSBIXG00005015493 ENSBIXG00005015429 SYK (ENSBIXG00005015383) GADD45G (ENSBIXG00005007017) ENSBIXG00005015086 SEMA4D (ENSBIXG00005015061) SECISBP2 (ENSBIXG00005002182) CKS2 (ENSBIXG00005014877) SHC3 (ENSBIXG00005007541) S1PR3 (ENSBIXG00005014807) ENSBIXG00005014767 ENSBIXG00005014754 SPIN1 (ENSBIXG00005014731) ENSBIXG00005014699 ENSBIXG00005002055 ##22 ENSBIXG00005014679 ENSBIXG00005014615 ENSBIXG00005001979 ENSBIXG00005014483 CAVIN4 (ENSBIXG00005014388) TMEFF1 (ENSBIXG00005014446) PLPPR1 (ENSBIXG00005014325) ENSBIXG00005014276 MRPL50 (ENSBIXG00005014246) ZNF189 (ENSBIXG00005006126) ENSBIXG00005014223 ENSBIXG00005014133 RNF20 (ENSBIXG00005001840) GRIN3A (ENSBIXG00005014071) ENSBIXG00005014002 Cow DUPLICATION Cow MODERN SPECIES 27 SPTLC1 (ENSBTAG00000002220) ROR2 (ENSBTAG00000005092) ENSBTAG00000054391 AUH (ENSBTAG00000047649) SYK (ENSBTAG00000004767) DIRAS2 (ENSBTAG00000014523) GADD45G (ENSBTAG00000003033) SEMA4D (ENSBTAG00000001941) SECISBP2 (ENSBTAG00000001939) CKS2 (ENSBTAG00000001938) SHC3 (ENSBTAG00000011375) S1PR3 (ENSBTAG00000011374) ENSBTAG00000052296 NXNL2 (ENSBTAG00000019958) SPIN1 (ENSBTAG00000003044) ENSBTAG00000051928 ##22 ENSBTAG00000054632 CDK20 (ENSBTAG00000015171) ENSBTAG00000025756 ENSBTAG00000021235 MSANTD3 (ENSBTAG00000052146) TMEFF1 (ENSBTAG00000021991) CAVIN4 (ENSBTAG00000021992) PLPPR1 (ENSBTAG00000003137) ENSBTAG00000025760 MRPL50 (ENSBTAG00000008962) ZNF189 (ENSBTAG00000015348) ALDOB (ENSBTAG00000015358) PGAP4 (ENSBTAG00000020844) RNF20 (ENSBTAG00000009516) GRIN3A (ENSBTAG00000018445) Cow MODERN SPECIES 12 ENSBTAG00000051407 ENSBTAG00000051955 CDH12 (ENSBTAG00000025893) ENSBTAG00000013660 CDH18 (ENSBTAG00000037844) ENSBTAG00000052828 ENSBTAG00000012971 ENSBTAG00000049990 ENSBTAG00000054794 ENSBTAG00000051411 ENSBTAG00000049086 ENSBTAG00000048368 ENSBTAG00000053920 ENSBTAG00000055246 ENSBTAG00000049518 ENSBTAG00000053528 ##22 BASP1 (ENSBTAG00000048565) MYO10 (ENSBTAG00000020126) RETREG1 (ENSBTAG00000016444) ZNF622 (ENSBTAG00000016441) MARCHF11 (ENSBTAG00000037576) FBXL7 (ENSBTAG00000003219) ANKH (ENSBTAG00000013391) OTULIN (ENSBTAG00000003186) OTULINL (ENSBTAG00000000672) TRIO (ENSBTAG00000005514) ENSBTAG00000054860 DNAH5 (ENSBTAG00000021972) ENSBTAG00000053006 ENSBTAG00000049263 CTNND2 (ENSBTAG00000017222) Euarchontoglires DUPLICATION Euarchontoglires DUPLICATION Euarchontoglires ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.a ##22 Primates ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.a ##22 Hominoidea ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.a ##22 Gibbon MODERN SPECIES 23 ENSNLEG00000000512 ENSNLEG00000028993 TFAP2A (ENSNLEG00000000503) ENSNLEG00000000485 SLC35B3 (ENSNLEG00000030754) EEF1E1 (ENSNLEG00000035609) BLOC1S5 (ENSNLEG00000029882) ENSNLEG00000027984 TXNDC5 (ENSNLEG00000011683) ENSNLEG00000011672 SNRNP48 (ENSNLEG00000011667) DSP (ENSNLEG00000011664) ENSNLEG00000029272 ENSNLEG00000011621 ENSNLEG00000027842 ENSNLEG00000027260 ##22 ENSNLEG00000032024 CAGE1 (ENSNLEG00000011592) SSR1 (ENSNLEG00000011572) RREB1 (ENSNLEG00000011554) LY86 (ENSNLEG00000011547) F13A1 (ENSNLEG00000011509) NRN1 (ENSNLEG00000011502) FARS2 (ENSNLEG00000011479) ENSNLEG00000030412 ENSNLEG00000011472 ENSNLEG00000028872 PPP1R3G (ENSNLEG00000018873) RPP40 (ENSNLEG00000034397) CDYL (ENSNLEG00000011446) ENSNLEG00000031998 Hominidae DUPLICATION Hominidae ANCESTRAL SPECIES 5 ENSGT00940000163315 ENSGT00940000156849 ENSGT00390000012955.v ENSGT00950000182848.c.b.a.a ENSGT00940000163455 ENSGT00940000157040 ENSGT00390000003564 ENSGT00390000016974 ENSGT00940000154703.e.a ENSGT00940000156920 ENSGT00940000158768 ENSGT00390000004886 ENSGT00940000154843.F ENSGT00390000012547.b.b.a ENSGT00940000157075 ENSGT00390000008610.a.b.a.a.a.s.a.a ##22 ENSGT00390000001805 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 ENSGT00940000157289.a ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 ENSGT00390000014167 ENSGT00550000076325 ENSGT00530000063480.b.h Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00940000163315 ENSGT00940000156849 ENSGT00390000012955.v ENSGT00950000182848.c.b.a.a ENSGT00940000163455 ENSGT00940000157040 ENSGT00390000003564 ENSGT00390000016974 ENSGT00940000154703.e.a ENSGT00940000156920 ENSGT00940000158768.p ENSGT00390000004886 ENSGT00940000154843.F ENSGT00390000012547.b.b.a ENSGT00940000157075 ENSGT00390000008610.a.b.a.a.a.s.a.a.a ##22 ENSGT00390000001805 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00940000153288.a.a.h.d ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 ENSGT00940000157289.a ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 ENSGT00390000014167 ENSGT00550000076325 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00390000001263 ENSGT00940000163315 ENSGT00940000156849 ENSGT00950000182848.c.b.a.a ENSGT00940000163455 ENSGT00940000157040 ENSGT00390000003564 ENSGT00390000016974 ENSGT00940000154703.e.a ENSGT00940000156920 ENSGT00940000158768.p ENSGT00390000004886 ENSGT00940000154843.F ENSGT00390000012547.b.b.a ENSGT00940000157075 ENSGT00390000008610.a.b.a.a.a.s.a.a.a ##22 ENSGT00390000001805 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00940000153288.a.a.h.d ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 ENSGT00940000157289.a ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 ENSGT00390000014167 ENSGT00940000155106.t Pan ANCESTRAL SPECIES 29 ENSGT00390000001263 ENSGT00940000163315 ENSGT00940000156849 ENSGT00950000182848.c.b.a.a ENSGT00940000163455 ENSGT00940000157040 ENSGT00390000003564 ENSGT00390000016974 ENSGT00940000154703.e.a ENSGT00940000156920 ENSGT00940000158768.p ENSGT00390000004886 ENSGT00940000154843.F ENSGT00390000012547.b.b.a ENSGT00940000157075 ENSGT00390000008610.a.b.a.a.a.s.a.a.a ##22 ENSGT00390000001805 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00940000153288.a.a.h.d ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00390000008859.b.d.k.a.b.a ENSGT00940000158071 ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 ENSGT00390000014167 ENSGT00940000155106.t Chimpanzee MODERN SPECIES 19 PAK1IP1 (ENSPTRG00000017719) C6H6orf52 (ENSPTRG00000017718) GCNT2 (ENSPTRG00000017717) TFAP2A (ENSPTRG00000017714) ENSPTRG00000017711 SLC35B3 (ENSPTRG00000017710) EEF1E1 (ENSPTRG00000017709) BLOC1S5 (ENSPTRG00000048795) ENSPTRG00000044939 TXNDC5 (ENSPTRG00000017708) BMP6 (ENSPTRG00000017705) SNRNP48 (ENSPTRG00000017703) DSP (ENSPTRG00000017702) ENSPTRG00000050048 RIOK1 (ENSPTRG00000017700) ENSPTRG00000047374 ##22 CAGE1 (ENSPTRG00000017699) SSR1 (ENSPTRG00000017698) RREB1 (ENSPTRG00000017697) ENSPTRG00000046122 LY86 (ENSPTRG00000017696) F13A1 (ENSPTRG00000017694) NRN1 (ENSPTRG00000017693) ENSPTRG00000044064 ENSPTRG00000049807 FARS2 (ENSPTRG00000017692) LYRM4 (ENSPTRG00000017691) ENSPTRG00000049487 ENSPTRG00000045800 PPP1R3G (ENSPTRG00000042254) RPP40 (ENSPTRG00000017690) Bonobo MODERN SPECIES 19 PAK1IP1 (ENSPPAG00000027804) C6orf52 (ENSPPAG00000028663) GCNT2 (ENSPPAG00000041367) ENSPPAG00000043300 ENSPPAG00000042636 SLC35B3 (ENSPPAG00000039344) EEF1E1 (ENSPPAG00000035045) BLOC1S5 (ENSPPAG00000027769) ENSPPAG00000043373 TXNDC5 (ENSPPAG00000038633) BMP6 (ENSPPAG00000002110) SNRNP48 (ENSPPAG00000032873) DSP (ENSPPAG00000031494) ENSPPAG00000041327 RIOK1 (ENSPPAG00000016349) ENSPPAG00000039573 ##22 CAGE1 (ENSPPAG00000033711) SSR1 (ENSPPAG00000031246) RREB1 (ENSPPAG00000037017) ENSPPAG00000041064 LY86 (ENSPPAG00000032346) F13A1 (ENSPPAG00000002226) ENSPPAG00000040029 ENSPPAG00000037456 ENSPPAG00000038177 FARS2 (ENSPPAG00000040551) ENSPPAG00000028919 ENSPPAG00000009976 ENSPPAG00000035824 PPP1R3G (ENSPPAG00000010105) RPP40 (ENSPPAG00000023703) Gorilla MODERN SPECIES 19 C6orf52 (ENSGGOG00000013899) ENSGGOG00000004765 ENSGGOG00000013682 TFAP2A (ENSGGOG00000007542) ENSGGOG00000006522 SLC35B3 (ENSGGOG00000011511) ENSGGOG00000009591 BLOC1S5 (ENSGGOG00000040405) ENSGGOG00000026610 TXNDC5 (ENSGGOG00000000906) BMP6 (ENSGGOG00000000904) SNRNP48 (ENSGGOG00000013220) DSP (ENSGGOG00000013213) ENSGGOG00000040077 RIOK1 (ENSGGOG00000011037) ENSGGOG00000022405 ##22 ENSGGOG00000038504 ##22 CAGE1 (ENSGGOG00000011030) SSR1 (ENSGGOG00000004566) RREB1 (ENSGGOG00000004561) ENSGGOG00000022862 LY86 (ENSGGOG00000024223) F13A1 (ENSGGOG00000001196) ENSGGOG00000005223 ENSGGOG00000024909 ENSGGOG00000039665 FARS2 (ENSGGOG00000011842) ENSGGOG00000041108 ENSGGOG00000034970 ENSGGOG00000039934 PPP1R3G (ENSGGOG00000025700) Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.a.a.b ##22 Gorilla MODERN SPECIES 19 ENSGGOG00000004765 ENSGGOG00000013682 TFAP2A (ENSGGOG00000007542) ENSGGOG00000006522 SLC35B3 (ENSGGOG00000011511) ENSGGOG00000009591 BLOC1S5 (ENSGGOG00000040405) ENSGGOG00000026610 TXNDC5 (ENSGGOG00000000906) BMP6 (ENSGGOG00000000904) SNRNP48 (ENSGGOG00000013220) DSP (ENSGGOG00000013213) ENSGGOG00000040077 RIOK1 (ENSGGOG00000011037) ENSGGOG00000022405 ##22 ENSGGOG00000038504 ##22 CAGE1 (ENSGGOG00000011030) SSR1 (ENSGGOG00000004566) RREB1 (ENSGGOG00000004561) ENSGGOG00000022862 LY86 (ENSGGOG00000024223) F13A1 (ENSGGOG00000001196) ENSGGOG00000005223 ENSGGOG00000024909 ENSGGOG00000039665 FARS2 (ENSGGOG00000011842) ENSGGOG00000041108 ENSGGOG00000034970 ENSGGOG00000039934 PPP1R3G (ENSGGOG00000025700) RPP40 (ENSGGOG00000013764) Orangutan MODERN SPECIES 19 PAK1IP1 (ENSPPYG00000016224) C6orf52 (ENSPPYG00000016223) GCNT2 (ENSPPYG00000016221) ENSPPYG00000033781 TFAP2A (ENSPPYG00000016218) ENSPPYG00000016217 SLC35B3 (ENSPPYG00000016216) EEF1E1 (ENSPPYG00000016215) BLOC1S5 (ENSPPYG00000038742) ENSPPYG00000016213 TXNDC5 (ENSPPYG00000016212) BMP6 (ENSPPYG00000016210) SNRNP48 (ENSPPYG00000016209) DSP (ENSPPYG00000016208) RIOK1 (ENSPPYG00000016207) ENSPPYG00000038045 ##22 CAGE1 (ENSPPYG00000016206) SSR1 (ENSPPYG00000016205) RREB1 (ENSPPYG00000016204) LY86 (ENSPPYG00000035465) F13A1 (ENSPPYG00000016200) ENSPPYG00000016199 ENSPPYG00000040794 FARS2 (ENSPPYG00000016197) ENSPPYG00000039334 ENSPPYG00000030077 PPP1R3G (ENSPPYG00000040553) RPP40 (ENSPPYG00000016194) ENSPPYG00000016193 CDYL (ENSPPYG00000016192) ENSPPYG00000033633 Hominidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.a.b ##22 Orangutan MODERN SPECIES 16 MCCC1 (ENSPPYG00000014331) LAMP3 (ENSPPYG00000014332) MCF2L2 (ENSPPYG00000014333) B3GNT5 (ENSPPYG00000032259) KLHL6 (ENSPPYG00000029418) KLHL24 (ENSPPYG00000014335) YEATS2 (ENSPPYG00000014336) MAP6D1 (ENSPPYG00000035906) ##27 PARL (ENSPPYG00000014338) ABCC5 (ENSPPYG00000014339) ENSPPYG00000014340 HTR3C (ENSPPYG00000014341) HTR3E (ENSPPYG00000014342) ENSPPYG00000014343 EIF2B5 (ENSPPYG00000014344) ENSPPYG00000037065 ##22 DVL3 (ENSPPYG00000014345) AP2M1 (ENSPPYG00000014346) ABCF3 (ENSPPYG00000014347) VWA5B2 (ENSPPYG00000014349) ALG3 (ENSPPYG00000014350) EEF1AKMT4 (ENSPPYG00000014351) CAMK2N2 (ENSPPYG00000014352) ECE2 (ENSPPYG00000014353) PSMD2 (ENSPPYG00000014354) EIF4G1 (ENSPPYG00000025902) ENSPPYG00000014355 CLCN2 (ENSPPYG00000014356) POLR2H (ENSPPYG00000014357) ENSPPYG00000014358 CHRD (ENSPPYG00000014359) Strepsirrhini ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.a ##22 Lemuriformes ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.a ##22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.a ##22 Coquerels sifaka MODERN SPECIES 145 ENSPCOG00000024652 ##22 ENSPCOG00000024405 SCIN (ENSPCOG00000015873) ENSPCOG00000021736 VWDE (ENSPCOG00000019980) TMEM106B (ENSPCOG00000015649) THSD7A (ENSPCOG00000022074) ENSPCOG00000012269 ENSPCOG00000017457 Euarchontoglires ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Primates ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Mas night monkey MODERN SPECIES 1017 ENSANAG00000020964 PLCB1 (ENSANAG00000034487) TMX4 (ENSANAG00000028585) ENSANAG00000020975 HAO1 (ENSANAG00000036540) ENSANAG00000022936 BMP2 (ENSANAG00000034707) FERMT1 (ENSANAG00000035182) LRRN4 (ENSANAG00000036399) CRLS1 (ENSANAG00000015919) MCM8 (ENSANAG00000034654) TRMT6 (ENSANAG00000021260) CHGB (ENSANAG00000026139) SHLD1 (ENSANAG00000029247) GPCPD1 (ENSANAG00000034321) ENSANAG00000031858 ##22 PROKR2 (ENSANAG00000025735) CDS2 (ENSANAG00000035489) PCNA (ENSANAG00000037488) TMEM230 (ENSANAG00000019309) ENSANAG00000027334 SLC23A2 (ENSANAG00000036317) RASSF2 (ENSANAG00000027057) PRNP (ENSANAG00000030585) ENSANAG00000037141 ADRA1D (ENSANAG00000021139) SMOX (ENSANAG00000038168) ENSANAG00000030550 ENSANAG00000020795 RNF24 (ENSANAG00000027230) PANK2 (ENSANAG00000035763) Cebidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Marmoset MODERN SPECIES 19 PLPPR4 (ENSCJAG00000039484) PALMD (ENSCJAG00000018277) FRRS1 (ENSCJAG00000018284) ENSCJAG00000081970 ENSCJAG00000077907 ENSCJAG00000079107 SLC25A24 (ENSCJAG00000008602) VAV3 (ENSCJAG00000008623) NTNG1 (ENSCJAG00000008705) PRMT6 (ENSCJAG00000022625) ENSCJAG00000075979 RNPC3 (ENSCJAG00000035686) COL11A1 (ENSCJAG00000008922) ENSCJAG00000053324 OLFM3 (ENSCJAG00000041573) ENSCJAG00000071495 ##22 S1PR1 (ENSCJAG00000003530) ENSCJAG00000085187 DPH5 (ENSCJAG00000003472) ENSCJAG00000072794 SLC30A7 (ENSCJAG00000003508) EXTL2 (ENSCJAG00000003497) VCAM1 (ENSCJAG00000003455) GPR88 (ENSCJAG00000040608) ENSCJAG00000076583 ENSCJAG00000082343 ENSCJAG00000087395 CDC14A (ENSCJAG00000003430) ENSCJAG00000070375 RTCA (ENSCJAG00000003398) DBT (ENSCJAG00000003363) Cebidae_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Capuchin MODERN SPECIES 31 PLCB4 (ENSCCAG00000034910) ENSCCAG00000031830 PLCB1 (ENSCCAG00000020950) TMX4 (ENSCCAG00000032919) HAO1 (ENSCCAG00000034734) BMP2 (ENSCCAG00000017127) FERMT1 (ENSCCAG00000013671) LRRN4 (ENSCCAG00000030748) CRLS1 (ENSCCAG00000037351) MCM8 (ENSCCAG00000026974) TRMT6 (ENSCCAG00000026939) CHGB (ENSCCAG00000026987) SHLD1 (ENSCCAG00000029838) GPCPD1 (ENSCCAG00000025356) ENSCCAG00000030617 ENSCCAG00000023107 ##22 ENSCCAG00000030115 PROKR2 (ENSCCAG00000037325) ENSCCAG00000032595 CDS2 (ENSCCAG00000026795) PCNA (ENSCCAG00000037224) ENSCCAG00000028801 ENSCCAG00000019801 SLC23A2 (ENSCCAG00000027857) RASSF2 (ENSCCAG00000034388) MITD1 (ENSCCAG00000031759) LIPT1 (ENSCCAG00000018953) TSGA10 (ENSCCAG00000029564) C2orf15 (ENSCCAG00000027023) CRACDL (ENSCCAG00000029992) MGAT4A (ENSCCAG00000025882) Catarrhini ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Hominoidea ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00910000147149 ENSGT00530000063947.B ##27 ENSGT00390000013063 ENSGT00940000163497 ENSGT00940000155470.b ENSGT00940000154037.A.m ENSGT00940000156739.b.b.a ENSGT00940000156739.b.a ENSGT00940000163899.c ENSGT00510000047568 ENSGT00390000008610.a.b.a.a.a.s.b ##22 ENSGT00950000182903.a.a ENSGT00940000159223 ENSGT00940000155604 ENSGT00940000157096 ENSGT00390000013904 ENSGT00940000164140 ENSGT00390000004940.a.a ENSGT00940000156921 ENSGT00940000153386.B.a ENSGT00940000154648.a.a ENSGT00950000183106.a.a.b ENSGT00940000155439 ENSGT00390000018195 ENSGT00390000006294 ENSGT00940000161767 Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ##27 ENSGT00390000013063 ENSGT00940000163497 ENSGT00940000155470.b ENSGT00940000154037.A.m ENSGT00940000156739.b.b.a ENSGT00940000156739.b.a ENSGT00940000163899.d ENSGT00940000163899.c ENSGT00510000047568 ENSGT00390000008610.a.b.a.a.a.s.b ##22 ENSGT00950000182903.a.a ENSGT00940000159223 ENSGT00940000155604 ENSGT00940000157096 ENSGT00390000013904 ENSGT00940000164140 ENSGT00390000004940.a.a ENSGT00940000156921 ENSGT00940000153386.B.a ENSGT00940000154648.a.a ENSGT00950000183106.a.a.b ENSGT00940000155439 ENSGT00390000018195 ENSGT00390000006294 ENSGT00940000161767 Pan ANCESTRAL SPECIES 2 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ##27 ENSGT00390000013063 ENSGT00940000163497 ENSGT00940000155470.b ENSGT00940000154037.A.m ENSGT00940000156739.b.b.a ENSGT00940000156739.b.a ENSGT00940000163899.d ENSGT00510000047568 ENSGT00390000008610.a.b.a.a.a.s.b ##22 ENSGT00950000182903.a.a ENSGT00940000159223 ENSGT00940000155604 ENSGT00940000157096 ENSGT00390000013904 ENSGT00940000156921 ENSGT00390000004940.a.a ENSGT00940000153386.B.a ENSGT00940000154648.a.a ENSGT00950000183106.a.a.b ENSGT00940000155439 ENSGT00390000018195 ENSGT00390000006294 ENSGT00940000161767 ENSGT00940000158024.C Chimpanzee MODERN SPECIES 16 LAMP3 (ENSPTRG00000015663) MCF2L2 (ENSPTRG00000015665) B3GNT5 (ENSPTRG00000015666) KLHL6 (ENSPTRG00000015667) KLHL24 (ENSPTRG00000015669) YEATS2 (ENSPTRG00000015670) MAP6D1 (ENSPTRG00000015672) ##27 PARL (ENSPTRG00000015673) ENSPTRG00000048232 ABCC5 (ENSPTRG00000050934) HTR3D (ENSPTRG00000015676) HTR3C (ENSPTRG00000015677) HTR3E (ENSPTRG00000015678) ENSPTRG00000050156 EIF2B5 (ENSPTRG00000015679) ENSPTRG00000015680 ##22 DVL3 (ENSPTRG00000015681) AP2M1 (ENSPTRG00000015682) ABCF3 (ENSPTRG00000015683) VWA5B2 (ENSPTRG00000015685) ALG3 (ENSPTRG00000047056) ECE2 (ENSPTRG00000015687) CAMK2N2 (ENSPTRG00000015688) PSMD2 (ENSPTRG00000015689) EIF4G1 (ENSPTRG00000015690) FAM131A (ENSPTRG00000015691) CLCN2 (ENSPTRG00000015692) POLR2H (ENSPTRG00000047600) THPO (ENSPTRG00000015694) CHRD (ENSPTRG00000015695) EPHB3 (ENSPTRG00000015696) Bonobo MODERN SPECIES 16 LAMP3 (ENSPPAG00000027592) MCF2L2 (ENSPPAG00000032914) B3GNT5 (ENSPPAG00000000714) KLHL6 (ENSPPAG00000028141) KLHL24 (ENSPPAG00000034331) YEATS2 (ENSPPAG00000015640) PARL (ENSPPAG00000037739) ENSPPAG00000032200 ABCC5 (ENSPPAG00000029506) ENSPPAG00000035283 ENSPPAG00000038501 HTR3C (ENSPPAG00000039021) HTR3E (ENSPPAG00000028726) ENSPPAG00000026468 EIF2B5 (ENSPPAG00000030604) ENSPPAG00000033710 ##22 DVL3 (ENSPPAG00000041835) AP2M1 (ENSPPAG00000035664) ABCF3 (ENSPPAG00000041562) VWA5B2 (ENSPPAG00000027581) ALG3 (ENSPPAG00000027959) ECE2 (ENSPPAG00000027988) PSMD2 (ENSPPAG00000035691) EIF4G1 (ENSPPAG00000042782) FAM131A (ENSPPAG00000036558) CLCN2 (ENSPPAG00000032193) POLR2H (ENSPPAG00000035658) THPO (ENSPPAG00000031907) CHRD (ENSPPAG00000034959) EPHB3 (ENSPPAG00000034296) MAGEF1 (ENSPPAG00000023136) Gorilla MODERN SPECIES 16 MCF2L2 (ENSGGOG00000005734) B3GNT5 (ENSGGOG00000038086) KLHL6 (ENSGGOG00000010394) KLHL24 (ENSGGOG00000028174) YEATS2 (ENSGGOG00000003713) ENSGGOG00000044009 MAP6D1 (ENSGGOG00000027837) ##27 PARL (ENSGGOG00000000416) ENSGGOG00000036736 ABCC5 (ENSGGOG00000000418) ENSGGOG00000036841 ENSGGOG00000007484 HTR3C (ENSGGOG00000039758) HTR3E (ENSGGOG00000041086) EIF2B5 (ENSGGOG00000007425) ENSGGOG00000026674 ##22 DVL3 (ENSGGOG00000007433) AP2M1 (ENSGGOG00000007445) ABCF3 (ENSGGOG00000007448) VWA5B2 (ENSGGOG00000007552) ALG3 (ENSGGOG00000007563) EEF1AKMT4-ECE2 (ENSGGOG00000007568) CAMK2N2 (ENSGGOG00000001936) PSMD2 (ENSGGOG00000027136) EIF4G1 (ENSGGOG00000013919) POLR2H (ENSGGOG00000002912) ENSGGOG00000038977 THPO (ENSGGOG00000000109) CHRD (ENSGGOG00000000110) EPHB3 (ENSGGOG00000016281) MAGEF1 (ENSGGOG00000009456) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Glires ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.s.b ##22 Degu MODERN SPECIES 87 ENSODEG00000005404 ENSODEG00000019192 ENSODEG00000005119 ENSODEG00000019122 ENSODEG00000005000 ENSODEG00000005878 ENSODEG00000005365 EXOC6 (ENSODEG00000005032) CYP26C1 (ENSODEG00000006273) CYP26A1 (ENSODEG00000006141) ENSODEG00000006071 MYOF (ENSODEG00000004826) ENSODEG00000004069 ENSODEG00000005256 ENSODEG00000005072 ENSODEG00000004737 ##22 ENSODEG00000004562 DNA2 (ENSODEG00000004357) ENSODEG00000004211 HNRNPH3 (ENSODEG00000004517) PBLD (ENSODEG00000004402) ATOH7 (ENSODEG00000004225) MYPN (ENSODEG00000008662) HERC4 (ENSODEG00000008527) SIRT1 (ENSODEG00000005951) ENSODEG00000019249 ENSODEG00000005484 CTNNA3 (ENSODEG00000005148) ENSODEG00000005042 ENSODEG00000019144 REEP3 (ENSODEG00000004708) Euarchontoglires ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Glires ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Rodentia ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Kangaroo rat MODERN SPECIES 428 ENSDORG00000009569 Terf1 (ENSDORG00000003657) Sbspon (ENSDORG00000003658) 4930444P10Rik (ENSDORG00000030113) ENSDORG00000027501 Rdh10 (ENSDORG00000024154) Stau2 (ENSDORG00000014308) ENSDORG00000023483 ENSDORG00000027111 Ly96 (ENSDORG00000014550) Jph1 (ENSDORG00000028458) Gdap1 (ENSDORG00000006224) Pi15 (ENSDORG00000003978) Crispld1 (ENSDORG00000007128) Hnf4g (ENSDORG00000014548) ENSDORG00000024577 ##22 Zfhx4 (ENSDORG00000016167) Pex2 (ENSDORG00000016372) ENSDORG00000025479 ENSDORG00000023488 Pkia (ENSDORG00000025538) Zc2hc1a (ENSDORG00000001862) Il7 (ENSDORG00000028304) Myomorpha ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Lesser Egyptian jerboa MODERN SPECIES 70 Ccdc186 (ENSJJAG00000014926) Adrb1 (ENSJJAG00000017482) Nhlrc2 (ENSJJAG00000024106) ENSJJAG00000021476 Dclre1a (ENSJJAG00000016708) Plekhs1 (ENSJJAG00000024135) Casp7 (ENSJJAG00000002665) Nrap (ENSJJAG00000012910) Habp2 (ENSJJAG00000018357) ENSJJAG00000020753 Vti1a (ENSJJAG00000021026) ENSJJAG00000019061 Acsl5 (ENSJJAG00000002863) Tectb (ENSJJAG00000000313) Gpam (ENSJJAG00000023414) ENSJJAG00000023306 ##22 Shoc2 (ENSJJAG00000011062) Bbip1 (ENSJJAG00000019220) Pdcd4 (ENSJJAG00000022140) Rbm20 (ENSJJAG00000019726) Smc3 (ENSJJAG00000010714) Dusp5 (ENSJJAG00000024125) Smndc1 (ENSJJAG00000019974) Mxi1 (ENSJJAG00000015975) Add3 (ENSJJAG00000024059) Xpnpep1 (ENSJJAG00000013171) Sorcs1 (ENSJJAG00000020651) ENSJJAG00000023532 Sorcs3 (ENSJJAG00000012838) Cfap58 (ENSJJAG00000022379) ENSJJAG00000016144 Muroidea ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Cricetidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Northern American deer mouse MODERN SPECIES 5 ENSPEMG00000020943 ENSPEMG00000008098 Ppp4r3a (ENSPEMG00000015313) Ccdc88c (ENSPEMG00000030742) Gpr68 (ENSPEMG00000030593) Dglucy (ENSPEMG00000016463) Rps6ka5 (ENSPEMG00000023079) Ttc7b (ENSPEMG00000021206) Calm1 (ENSPEMG00000021298) Nrde2 (ENSPEMG00000023707) Psmc1 (ENSPEMG00000009856) Kcnk13 (ENSPEMG00000001940) ENSPEMG00000021294 Tdp1 (ENSPEMG00000021415) Efcab11 (ENSPEMG00000020988) ENSPEMG00000020704 ##22 Foxn3 (ENSPEMG00000021034) ENSPEMG00000030170 Ttc8 (ENSPEMG00000021250) Eml5 (ENSPEMG00000021933) ENSPEMG00000020931 Ptpn21 (ENSPEMG00000016264) Spata7 (ENSPEMG00000017367) Kcnk10 (ENSPEMG00000020529) Gpr65 (ENSPEMG00000026989) Galc (ENSPEMG00000006001) ENSPEMG00000010976 Flrt2 (ENSPEMG00000028941) Sel1l (ENSPEMG00000020699) Ston2 (ENSPEMG00000022831) Gtf2a1 (ENSPEMG00000030054) Murinae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Rat DUPLICATION Rat MODERN SPECIES 14 Cftr (ENSRNOG00000055103) Cttnbp2 (ENSRNOG00000061845) Lsm8 (ENSRNOG00000070946) Ankrd7 (ENSRNOG00000055481) LOC685171 (ENSRNOG00000058543) Kcnd2 (ENSRNOG00000067416) Tspan12 (ENSRNOG00000059016) ENSRNOG00000064820 Ing3 (ENSRNOG00000005496) Cped1 (ENSRNOG00000021840) Wnt16 (ENSRNOG00000005781) Fam3c (ENSRNOG00000060349) ENSRNOG00000063098 Ptprz1 (ENSRNOG00000006030) Aass (ENSRNOG00000039494) AABR07025928.1 (ENSRNOG00000056660) ##22 ENSRNOG00000068406 Fezf1 (ENSRNOG00000007608) Cadps2 (ENSRNOG00000007636) Rnf133 (ENSRNOG00000065130) Tas2r118 (ENSRNOG00000021799) Slc13a1 (ENSRNOG00000008121) Iqub (ENSRNOG00000021729) Ndufa5 (ENSRNOG00000071062) Asb15 (ENSRNOG00000006365) Lmod2 (ENSRNOG00000045831) Wasl (ENSRNOG00000006975) ENSRNOG00000067771 Hyal6 (ENSRNOG00000021695) Hyal4 (ENSRNOG00000007212) Spam1 (ENSRNOG00000007231) Rat MODERN SPECIES 4 Rgs18 (ENSRNOG00000003959) Brinp3 (ENSRNOG00000002811) Gapdh-ps17 (ENSRNOG00000022174) Pla2g4a (ENSRNOG00000002657) ENSRNOG00000066166 Ptgs2 (ENSRNOG00000002525) Pdc (ENSRNOG00000002517) Odr4 (ENSRNOG00000002473) Tpr (ENSRNOG00000002394) Prg4 (ENSRNOG00000002385) Hmcn1 (ENSRNOG00000028627) Ivns1abp (ENSRNOG00000002618) Swt1 (ENSRNOG00000032258) Trmt1l (ENSRNOG00000002580) Rnf2 (ENSRNOG00000002454) ENSRNOG00000064602 ##22 Niban1 (ENSRNOG00000002403) Edem3 (ENSRNOG00000028358) AABR07021384.1 (ENSRNOG00000029859) RGD1309104 (ENSRNOG00000028236) Tsen15 (ENSRNOG00000002352) Colgalt2 (ENSRNOG00000028207) Rgl1 (ENSRNOG00000002347) Apobec4 (ENSRNOG00000028089) Arpc5 (ENSRNOG00000028062) Ncf2 (ENSRNOG00000028016) Smg7 (ENSRNOG00000027962) Nmnat2 (ENSRNOG00000027697) Lamc2 (ENSRNOG00000002667) Lamc1 (ENSRNOG00000002680) Shcbp1l (ENSRNOG00000002691) Rat MODERN SPECIES 16 Foxn3 (ENSRNOG00000004709) Efcab11 (ENSRNOG00000053317) Tdp1 (ENSRNOG00000003831) Kcnk13 (ENSRNOG00000047363) ENSRNOG00000062500 Psmc1 (ENSRNOG00000003951) Nrde2 (ENSRNOG00000004004) Calm1 (ENSRNOG00000004060) Ttc7b (ENSRNOG00000027300) Rps6ka5 (ENSRNOG00000004362) ENSRNOG00000064989 Dglucy (ENSRNOG00000004442) Gpr68 (ENSRNOG00000046309) Ccdc88c (ENSRNOG00000004482) Ppp4r3a (ENSRNOG00000027773) ENSRNOG00000068437 ##22 Kif4b (ENSRNOG00000064692) Catsperb (ENSRNOG00000063175) Tc2n (ENSRNOG00000004754) Fbln5 (ENSRNOG00000050539) Trip11 (ENSRNOG00000005292) Atxn3 (ENSRNOG00000005470) Cpsf2 (ENSRNOG00000005733) Slc24a4 (ENSRNOG00000006729) Rin3 (ENSRNOG00000007062) Lgmn (ENSRNOG00000007089) Golga5 (ENSRNOG00000007699) Chga (ENSRNOG00000052549) Itpk1 (ENSRNOG00000008051) Moap1 (ENSRNOG00000033970) Lyset (ENSRNOG00000008101) Rodentia_A ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Degu MODERN SPECIES 48 ENSODEG00000020078 CCDC177 (ENSODEG00000014037) PLEKHD1 (ENSODEG00000015081) SLC39A9 (ENSODEG00000013611) ENSODEG00000012922 GALNT16 (ENSODEG00000012688) EXD2 (ENSODEG00000014245) ENSODEG00000012626 DCAF5 (ENSODEG00000013978) ENSODEG00000012783 ENSODEG00000013534 ACTN1 (ENSODEG00000012961) ZFP36L1 (ENSODEG00000014162) ENSODEG00000020233 RAD51B (ENSODEG00000013988) ENSODEG00000013117 ##22 ZFYVE26 (ENSODEG00000013072) RDH12 (ENSODEG00000012984) RDH11 (ENSODEG00000013053) VTI1B (ENSODEG00000013143) ARG2 (ENSODEG00000014261) ENSODEG00000014130 PLEKHH1 (ENSODEG00000015158) TMEM229B (ENSODEG00000020052) ENSODEG00000014817 EIF2S1 (ENSODEG00000013168) ENSODEG00000013948 PALS1 (ENSODEG00000014070) GARIN2 (ENSODEG00000013098) GPHN (ENSODEG00000013064) ENSODEG00000014813 Sciuridae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Marmotini ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Marmotini_b ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Arctic ground squirrel MODERN SPECIES 122 MRPS30 (ENSUPAG00010003675) FGF10 (ENSUPAG00010003651) ENSUPAG00010003643 ##22 NNT (ENSUPAG00010003597) C5orf34 (ENSUPAG00010003541) TMEM267 (ENSUPAG00010003538) CCL28 (ENSUPAG00010003526) HMGCS1 (ENSUPAG00010003286) NIM1K (ENSUPAG00010003276) ZNF131 (ENSUPAG00010003204) ZNF622 (ENSUPAG00010003200) RETREG1 (ENSUPAG00010003159) MYO10 (ENSUPAG00010003073) ENSUPAG00010003068 BASP1 (ENSUPAG00010003065) CDH18 (ENSUPAG00010003003) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES DEDD (ENSSVLG00005011046) UFC1 (ENSSVLG00005011088) USP21 (ENSSVLG00005011165) PPOX (ENSSVLG00005011229) B4GALT3 (ENSSVLG00005011520) ADAMTS4 (ENSSVLG00005011573) NDUFS2 (ENSSVLG00005011719) FCER1G (ENSSVLG00005011790) APOA2 (ENSSVLG00005011878) TOMM40L (ENSSVLG00005011957) NR1I3 (ENSSVLG00005012116) PCP4L1 (ENSSVLG00005012693) MPZ (ENSSVLG00005012764) ENSSVLG00005012898 CFAP126 (ENSSVLG00005013094) ENSSVLG00005013164 ##22 ENSSVLG00005013511 HSPA6 (ENSSVLG00005013598) ENSSVLG00005013804 ENSSVLG00005014017 ENSSVLG00005014192 FCRLA (ENSSVLG00005014309) FCRLB (ENSSVLG00005014686) ENSSVLG00005014879 ENSSVLG00005014905 ATF6 (ENSSVLG00005014934) ENSSVLG00005014975 OLFML2B (ENSSVLG00005015059) ENSSVLG00005015160 ENSSVLG00005015344 SPATA46 (ENSSVLG00005015397) Eurasian red squirrel MODERN SPECIES 6 GBGT1 (ENSSVLG00005020564) RALGDS (ENSSVLG00005019860) CEL (ENSSVLG00005019483) GTF3C5 (ENSSVLG00005019188) GFI1B (ENSSVLG00005018870) TSC1 (ENSSVLG00005018656) SPACA9 (ENSSVLG00005018579) AK8 (ENSSVLG00005018451) GTF3C4 (ENSSVLG00005018400) DDX31 (ENSSVLG00005018236) BARHL1 (ENSSVLG00005018193) CFAP77 (ENSSVLG00005018111) ENSSVLG00005017981 SETX (ENSSVLG00005017731) NTNG2 (ENSSVLG00005017637) ENSSVLG00005017582 ##22 MED27 (ENSSVLG00005017453) RAPGEF1 (ENSSVLG00005016872) PRRT1B (ENSSVLG00005016788) UCK1 (ENSSVLG00005016660) POMT1 (ENSSVLG00005016596) PRRC2B (ENSSVLG00005025635) PLPP7 (ENSSVLG00005025595) FAM78A (ENSSVLG00005025584) NUP214 (ENSSVLG00005025553) AIF1L (ENSSVLG00005025524) LAMC3 (ENSSVLG00005025507) FIBCD1 (ENSSVLG00005025486) QRFP (ENSSVLG00005025477) ABL1 (ENSSVLG00005025464) EXOSC2 (ENSSVLG00005025425) Primates ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Strepsirrhini ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Bushbaby MODERN SPECIES 199 GOLIM4 (ENSOGAG00000007654) ENSOGAG00000029256 SERPINI1 (ENSOGAG00000014806) PDCD10 (ENSOGAG00000013887) WDR49 (ENSOGAG00000024542) SERPINI2 (ENSOGAG00000013876) ENSOGAG00000029601 ZBBX (ENSOGAG00000002218) BCHE (ENSOGAG00000004839) SLITRK3 (ENSOGAG00000014240) SI (ENSOGAG00000000040) OTOL1 (ENSOGAG00000031827) SPTSSB (ENSOGAG00000014914) NMD3 (ENSOGAG00000014910) B3GALNT1 (ENSOGAG00000026753) ENSOGAG00000025220 ##22 PPM1L (ENSOGAG00000001035) ARL14 (ENSOGAG00000033920) KPNA4 (ENSOGAG00000012428) Lemuriformes ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Mouse lemur MODERN SPECIES 14 TMC4 (ENSMICG00000041915) ENSMICG00000029352 CNOT3 (ENSMICG00000002370) PRPF31 (ENSMICG00000002355) NDUFA3 (ENSMICG00000002349) TFPT (ENSMICG00000036691) OSCAR (ENSMICG00000028728) VSTM1 (ENSMICG00000031115) CACNG6 (ENSMICG00000007586) CACNG8 (ENSMICG00000042694) CACNG7 (ENSMICG00000027690) PRKCG (ENSMICG00000015697) NLRP12 (ENSMICG00000045956) DPRX (ENSMICG00000047562) ZNF331 (ENSMICG00000028478) ENSMICG00000033427 ##22 ENSMICG00000045714 ENSMICG00000031054 ENSMICG00000043851 ENSMICG00000042640 ENSMICG00000042544 ENSMICG00000028055 ENSMICG00000007824 ENSMICG00000046471 ZNF160 (ENSMICG00000005265) ZNF415 (ENSMICG00000038620) ENSMICG00000026989 ENSMICG00000046000 ZNF677 (ENSMICG00000015174) ENSMICG00000034321 ENSMICG00000012504 Lemuriformes_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 300 ENSPCOG00000017152 RPIA (ENSPCOG00000012822) ENSPCOG00000026192 ##22 EIF2AK3 (ENSPCOG00000025041) THNSL2 (ENSPCOG00000024986) ENSPCOG00000013227 SMYD1 (ENSPCOG00000010170) ENSPCOG00000027666 CD8A (ENSPCOG00000015000) RMND5A (ENSPCOG00000015308) RNF103 (ENSPCOG00000022590) CHMP3 (ENSPCOG00000018240) KDM3A (ENSPCOG00000008403) REEP1 (ENSPCOG00000004132) MRPL35 (ENSPCOG00000007856) IMMT (ENSPCOG00000028075) PTCD3 (ENSPCOG00000005822) POLR1A (ENSPCOG00000026987) Coquerels sifaka MODERN SPECIES 532 GLOD5 (ENSPCOG00000012991) BPIFA3 (ENSPCOG00000012476) SUV39H1 (ENSPCOG00000025042) WAS (ENSPCOG00000028712) WDR13 (ENSPCOG00000010396) ENSPCOG00000014346 TBC1D25 (ENSPCOG00000015204) EBP (ENSPCOG00000019080) PORCN (ENSPCOG00000016355) ENSPCOG00000018822 SLC38A5 (ENSPCOG00000028146) ZNF630 (ENSPCOG00000014197) ENSPCOG00000025673 ENSPCOG00000028526 ZNF182 (ENSPCOG00000017106) ENSPCOG00000021977 ##22 ZNF81 (ENSPCOG00000019656) UXT (ENSPCOG00000017019) ELK1 (ENSPCOG00000002923) CFP (ENSPCOG00000027123) TIMP1 (ENSPCOG00000027302) SYN1 (ENSPCOG00000022095) ARAF (ENSPCOG00000017135) ENSPCOG00000025273 ZNF41 (ENSPCOG00000027769) ZNF157 (ENSPCOG00000022946) USP11 (ENSPCOG00000023822) CDK16 (ENSPCOG00000017857) UBA1 (ENSPCOG00000018127) RBM10 (ENSPCOG00000023562) NDUFB11 (ENSPCOG00000020853) Haplorrhini ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Simiiformes ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Mas night monkey MODERN SPECIES 528 ENSANAG00000019985 ##22 Catarrhini ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000156849 ENSGT00390000012955.v ENSGT00950000182848.c.b.a.a ENSGT00940000163455 ENSGT00940000163681 ENSGT00940000157040 ENSGT00390000003564 ENSGT00390000016974 ENSGT00940000154703.e.a ENSGT00940000156920 ENSGT00940000158768 ENSGT00390000004886 ENSGT00940000154843.F ENSGT00390000012547.b.b.a ENSGT00940000157075 ENSGT00390000008610.a.b.a.a.a.t ##22 ENSGT00390000001805 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 ENSGT00940000157289.a ENSGT00940000163747 ENSGT00390000014167 ENSGT00940000155106 ENSGT00910000147523 ENSGT00940000155105 ENSGT00390000008360 ENSGT00940000154543.b Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000156849 ENSGT00390000012955.v ENSGT00950000182848.c.b.a.a ENSGT00940000163455 ENSGT00940000163681 ENSGT00940000157040 ENSGT00390000003564 ENSGT00390000016974 ENSGT00940000154703.e.a ENSGT00940000156920 ENSGT00940000158768 ENSGT00390000004886 ENSGT00940000154843.F ENSGT00390000012547.b.b.a ENSGT00940000157075 ENSGT00390000008610.a.b.a.a.a.t ##22 ENSGT00390000001805 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 ENSGT00940000157289.a ENSGT00940000163747 ENSGT00390000014167 ENSGT00940000155106 ENSGT00910000147523 ENSGT00940000155105 ENSGT00390000008360 ENSGT00940000154543.b Cercopithecinae_a DUPLICATION Cercopithecinae_a DUPLICATION Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00390000012955.v ENSGT00950000182848.c.b.a.a ENSGT00940000163455 ENSGT00940000157040 ENSGT00390000003564 ENSGT00390000016974 ENSGT00940000154703.e.a ENSGT00940000156920 ENSGT00940000158768 ENSGT00390000004886 ENSGT00940000154843.F ENSGT00390000012547.b.b.a ENSGT00940000157075 ENSGT00390000008610.a.b.a.a.a.t.i ##22 ENSGT00390000001805 ENSGT00390000008610.a.b.a.a.a.t.h.a ##22 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 ENSGT00940000157289.a ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a ENSGT00910000146968 ENSGT00950000183142.a.b.a.b.p ENSGT00910000147352 ENSGT00940000163747 ENSGT00390000014167 ENSGT00940000155106 ENSGT00910000147523 Cercopithecinae_b ANCESTRAL SPECIES 37 ENSGT00940000163315 ENSGT00940000156849 ENSGT00390000012955.v ENSGT00950000182848.c.b.a.a ENSGT00940000163455 ENSGT00940000157040 ENSGT00390000003564 ENSGT00390000016974 ENSGT00940000154703.e.a ENSGT00940000156920 ENSGT00940000158768 ENSGT00390000004886 ENSGT00940000154843.F ENSGT00390000012547.b.b.a ENSGT00940000157075 ENSGT00390000008610.a.b.a.a.a.t.h.a ##22 ENSGT00390000001805 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a ENSGT00910000146968 ENSGT00950000183142.a.b.a.b.p ENSGT00910000147352 ENSGT00390000014167 ENSGT00940000155106 ENSGT00940000155105 ENSGT00940000154632.q.a.a.b Cercopithecinae_d ANCESTRAL SPECIES 41 ENSGT00940000163315 ENSGT00940000156849 ENSGT00390000012955.v ENSGT00950000182848.c.b.a.a ENSGT00940000163455 ENSGT00940000157040 ENSGT00390000003564 ENSGT00390000016974 ENSGT00940000154703.e.a ENSGT00940000156920 ENSGT00940000158768 ENSGT00390000004886 ENSGT00940000154843.F ENSGT00390000012547.b.b.a ENSGT00940000157075 ENSGT00390000008610.a.b.a.a.a.t.h.a ##22 ENSGT00390000001805 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a ENSGT00910000146968 ENSGT00950000183142.a.b.a.b.p ENSGT00910000147352 ENSGT00390000014167 ENSGT00940000155106 ENSGT00940000155105 ENSGT00940000154632.q.a.a.b Sooty mangabey MODERN SPECIES 385 ENSCATG00000026811 TFAP2A (ENSCATG00000040906) ENSCATG00000031464 ENSCATG00000005265 ENSCATG00000036873 SLC35B3 (ENSCATG00000029745) EEF1E1 (ENSCATG00000038260) BLOC1S5 (ENSCATG00000043344) ENSCATG00000039499 TXNDC5 (ENSCATG00000031520) BMP6 (ENSCATG00000040011) SNRNP48 (ENSCATG00000033947) DSP (ENSCATG00000034897) ENSCATG00000013581 RIOK1 (ENSCATG00000001548) ENSCATG00000037875 ##22 CAGE1 (ENSCATG00000030215) SSR1 (ENSCATG00000037180) RREB1 (ENSCATG00000043662) LY86 (ENSCATG00000038100) F13A1 (ENSCATG00000043896) NRN1 (ENSCATG00000043786) FARS2 (ENSCATG00000038588) ENSCATG00000035234 ENSCATG00000043081 ENSCATG00000042252 RPP40 (ENSCATG00000038787) CDYL (ENSCATG00000038624) Drill MODERN SPECIES 1017 GCNT2 (ENSMLEG00000041262) ENSMLEG00000043784 TFAP2A (ENSMLEG00000042408) ENSMLEG00000032653 SLC35B3 (ENSMLEG00000037638) EEF1E1 (ENSMLEG00000032511) BLOC1S5 (ENSMLEG00000033993) ENSMLEG00000039944 TXNDC5 (ENSMLEG00000041843) ENSMLEG00000014123 BMP6 (ENSMLEG00000042815) SNRNP48 (ENSMLEG00000034004) DSP (ENSMLEG00000041552) ENSMLEG00000041390 RIOK1 (ENSMLEG00000026327) ENSMLEG00000032606 ##22 CAGE1 (ENSMLEG00000044083) SSR1 (ENSMLEG00000038033) RREB1 (ENSMLEG00000040965) Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00950000183028.a.a.b ENSGT00390000014122.i.b.a.a.a.b ENSGT00950000183001.a.b.a ENSGT00390000001627.e ENSGT00940000157179 ENSGT00390000011769 ENSGT00940000162208 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 ENSGT00940000155625 ENSGT00390000008610.a.b.a.a.a.t.h.b ##22 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000156143 ENSGT00940000154552.b.g.b ENSGT00940000155377 ENSGT00910000147706 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b ENSGT00550000074968.b ENSGT00940000154798.a.d.a ENSGT00390000004766 Cercopithecinae_b ANCESTRAL SPECIES 17 ENSGT00390000014122.i.b.a.a.a.b ENSGT00950000183001.a.b.a ENSGT00390000001627.e ENSGT00940000157179 ENSGT00390000011769 ENSGT00940000162208 ENSGT00940000155184.e ENSGT00940000155184.f ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 ENSGT00940000155625 ENSGT00390000008610.a.b.a.a.a.t.h.b ##22 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000156143 ENSGT00940000154552.b.g.b ENSGT00940000155377 ENSGT00910000147706 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b ENSGT00550000074968.b ENSGT00940000154798.a.d.a ENSGT00390000004766 Cercopithecinae_d ANCESTRAL SPECIES 35 ENSGT00950000183001.a.b.a ENSGT00390000001627.e ENSGT00940000157179 ENSGT00390000011769 ENSGT00910000147120 ENSGT00910000147275 ENSGT00940000155184.e ENSGT00940000155184.f ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 ENSGT00940000155625 ENSGT00390000008610.a.b.a.a.a.t.h.b ##22 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000156143 ENSGT00940000154552.b.g.b ENSGT00940000155377 ENSGT00910000147706 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b ENSGT00550000074968.b ENSGT00940000154798.a.d.a ENSGT00390000004766 Sooty mangabey MODERN SPECIES 139 NDUFAF4 (ENSCATG00000033077) KLHL32 (ENSCATG00000039902) MMS22L (ENSCATG00000040956) ENSCATG00000009616 ENSCATG00000025087 ENSCATG00000015127 FBXL4 (ENSCATG00000045364) ENSCATG00000034106 FAXC (ENSCATG00000029392) COQ3 (ENSCATG00000009558) PNISR (ENSCATG00000012848) ENSCATG00000036657 USP45 (ENSCATG00000034256) ENSCATG00000029496 CCNC (ENSCATG00000042868) ENSCATG00000041886 ##22 PRDM13 (ENSCATG00000041563) MCHR2 (ENSCATG00000041382) SIM1 (ENSCATG00000003305) ENSCATG00000045106 ASCC3 (ENSCATG00000011281) ENSCATG00000012149 GRIK2 (ENSCATG00000030553) ENSCATG00000031343 HACE1 (ENSCATG00000011353) LIN28B (ENSCATG00000037900) BVES (ENSCATG00000037642) POPDC3 (ENSCATG00000018981) PREP (ENSCATG00000029835) ENSCATG00000003731 PRDM1 (ENSCATG00000029610) Macaca ANCESTRAL SPECIES 9 ENSGT00950000183028.a.a.b ENSGT00390000014122.i.b.a.a.a.b ENSGT00950000183001.a.b.a ENSGT00390000001627.e ENSGT00940000157179 ENSGT00390000011769 ENSGT00940000162208 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 ENSGT00940000155625 ENSGT00390000008610.a.b.a.a.a.t.h.b ##22 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000156143 ENSGT00940000154552.b.g.b ENSGT00940000155377 ENSGT00910000147706 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b ENSGT00550000074968.b ENSGT00940000154798.a.d.a ENSGT00390000004766 Macaca_a ANCESTRAL SPECIES 9 ENSGT00940000155095 ENSGT00390000002112 ENSGT00950000183028.a.a.b ENSGT00950000183001.a.b.a ENSGT00390000001627.e ENSGT00940000157179 ENSGT00390000011769 ENSGT00940000162208 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000164932 ENSGT00940000155625 ENSGT00390000008610.a.b.a.a.a.t.h.b ##22 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000156143 ENSGT00940000155377 ENSGT01100000263493.a.b.a.b.a.b.a.b.b.b.b ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b ENSGT00940000154798.a.d.a ENSGT00390000004766 ENSGT00950000186448 ENSGT00940000155695 Crab-eating macaque MODERN SPECIES 14 UFL1 (ENSMFAG00000038476) FHL5 (ENSMFAG00000038694) GPR63 (ENSMFAG00000007033) NDUFAF4 (ENSMFAG00000030804) KLHL32 (ENSMFAG00000041275) MMS22L (ENSMFAG00000003651) ENSMFAG00000057441 ENSMFAG00000055529 FBXL4 (ENSMFAG00000046148) FAXC (ENSMFAG00000041545) COQ3 (ENSMFAG00000034338) PNISR (ENSMFAG00000001373) USP45 (ENSMFAG00000038745) TSTD3 (ENSMFAG00000042059) CCNC (ENSMFAG00000030903) ENSMFAG00000001955 ##22 PRDM13 (ENSMFAG00000064719) ENSMFAG00000049964 MCHR2 (ENSMFAG00000040175) SIM1 (ENSMFAG00000002878) ENSMFAG00000061583 ASCC3 (ENSMFAG00000002081) ENSMFAG00000062609 GRIK2 (ENSMFAG00000040349) ENSMFAG00000000351 ENSMFAG00000064569 ENSMFAG00000052218 HACE1 (ENSMFAG00000039999) LIN28B (ENSMFAG00000065717) BVES (ENSMFAG00000045432) POPDC3 (ENSMFAG00000040532) Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000163315 ENSGT00940000156849 ENSGT00390000012955.v ENSGT00950000182848.c.b.a.a ENSGT00940000163455 ENSGT00940000157040 ENSGT00390000003564 ENSGT00390000016974 ENSGT00940000154703.e.a ENSGT00940000156920 ENSGT00940000158768 ENSGT00390000004886 ENSGT00940000154843.F ENSGT00390000012547.b.b.a ENSGT00940000157075 ENSGT00390000008610.a.b.a.a.a.t.i ##22 ENSGT00390000001805 ENSGT00390000008610.a.b.a.a.a.t.h.a ##22 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 ENSGT00940000157289.a ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a ENSGT00910000146968 ENSGT00950000183142.a.b.a.b.p ENSGT00910000147352 ENSGT00940000163747 ENSGT00390000014167 Macaca ANCESTRAL SPECIES 23 ENSGT00940000156849 ENSGT00390000012955.v ENSGT00950000182848.c.b.a.a ENSGT00940000163455 ENSGT00390000004803.h ENSGT00940000157040 ENSGT00390000003564 ENSGT00390000016974 ENSGT00940000154703.e.a ENSGT00940000156920 ENSGT00940000158768 ENSGT00390000004886 ENSGT00940000154843.F ENSGT00390000012547.b.b.a ENSGT00940000157075 ENSGT00390000008610.a.b.a.a.a.t.i ##22 ENSGT00390000001805 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 ENSGT00940000157289.a ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a ENSGT00910000146968 ENSGT00950000183142.a.b.a.b.p ENSGT00910000147352 ENSGT00940000163747 ENSGT00390000014167 ENSGT00940000155106 Pig-tailed macaque MODERN SPECIES 136 ENSMNEG00000033728 TFAP2A (ENSMNEG00000040025) ENSMNEG00000044460 ENSMNEG00000037743 SLC35B3 (ENSMNEG00000005122) EEF1E1 (ENSMNEG00000035493) BLOC1S5 (ENSMNEG00000002839) ENSMNEG00000039687 ENSMNEG00000037840 TXNDC5 (ENSMNEG00000032269) BMP6 (ENSMNEG00000035190) SNRNP48 (ENSMNEG00000042269) DSP (ENSMNEG00000040416) ENSMNEG00000028700 RIOK1 (ENSMNEG00000034396) ENSMNEG00000034466 ##22 CAGE1 (ENSMNEG00000033634) SSR1 (ENSMNEG00000039105) RREB1 (ENSMNEG00000038556) LY86 (ENSMNEG00000045408) F13A1 (ENSMNEG00000040730) NRN1 (ENSMNEG00000041129) FARS2 (ENSMNEG00000044897) ENSMNEG00000042081 ENSMNEG00000041203 ENSMNEG00000045067 ENSMNEG00000003878 RPP40 (ENSMNEG00000041986) CDYL (ENSMNEG00000038983) ECI2 (ENSMNEG00000000039) ENSMNEG00000034908 Rhinopithecus ANCESTRAL SPECIES 457 ENSGT00390000013594 ENSGT00390000008610.a.b.a.a.a.t ##22 ENSGT01030000235256 ENSGT00940000156416 ENSGT00940000154185.l.a.b.c ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000155426.t ENSGT00940000156276 ENSGT00440000039001.o ENSGT00940000155109.b Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 538 CPM (ENSRBIG00000037607) MDM2 (ENSRBIG00000028561) ENSRBIG00000013152 SLC35E3 (ENSRBIG00000030051) NUP107 (ENSRBIG00000044624) RAP1B (ENSRBIG00000024618) MDM1 (ENSRBIG00000035813) IL22 (ENSRBIG00000043271) IL26 (ENSRBIG00000033956) IFNG (ENSRBIG00000039716) DYRK2 (ENSRBIG00000031418) ENSRBIG00000040846 ##22 SPIN1 (ENSRBIG00000004313) NXNL2 (ENSRBIG00000037936) ENSRBIG00000035467 S1PR3 (ENSRBIG00000017109) ENSRBIG00000002194 SHC3 (ENSRBIG00000043903) CKS2 (ENSRBIG00000015423) SECISBP2 (ENSRBIG00000044115) ENSRBIG00000044888 SEMA4D (ENSRBIG00000034642) Black snub-nosed monkey MODERN SPECIES 623 SLC35B3 (ENSRBIG00000031147) ENSRBIG00000033472 BLOC1S5 (ENSRBIG00000037450) ENSRBIG00000036820 TXNDC5 (ENSRBIG00000028339) BMP6 (ENSRBIG00000030865) SNRNP48 (ENSRBIG00000043856) DSP (ENSRBIG00000040544) ENSRBIG00000004417 RIOK1 (ENSRBIG00000036685) ENSRBIG00000033623 ##22 CAGE1 (ENSRBIG00000033392) SSR1 (ENSRBIG00000028076) TCF21 (ENSRBIG00000032927) EYA4 (ENSRBIG00000023700) RPS12 (ENSRBIG00000029886) SLC18B1 (ENSRBIG00000006237) VNN2 (ENSRBIG00000036583) ENSRBIG00000044983 VNN1 (ENSRBIG00000036270) TAAR2 (ENSRBIG00000038395) TAAR5 (ENSRBIG00000003009) TAAR6 (ENSRBIG00000033492) TAAR9 (ENSRBIG00000040722) STX7 (ENSRBIG00000029721) ENSRBIG00000041096 Black snub-nosed monkey MODERN SPECIES 993 CCDC6 (ENSRBIG00000031215) ENSRBIG00000042266 ##22 MRLN (ENSRBIG00000021847) SLC16A9 (ENSRBIG00000011143) ENSRBIG00000039366 FAM13C (ENSRBIG00000026746) PHYHIPL (ENSRBIG00000030887) ENSRBIG00000027258 BICC1 (ENSRBIG00000030483) TFAM (ENSRBIG00000031869) UBE2D1 (ENSRBIG00000031898) ENSRBIG00000042763 IPMK (ENSRBIG00000025799) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 662 ENSRROG00000039887 ##22 ENSRROG00000029552 SPIN1 (ENSRROG00000029684) NXNL2 (ENSRROG00000040840) ENSRROG00000043201 S1PR3 (ENSRROG00000003192) ENSRROG00000015687 SHC3 (ENSRROG00000027017) CKS2 (ENSRROG00000039932) SECISBP2 (ENSRROG00000030742) SEMA4D (ENSRROG00000038007) ENSRROG00000004127 ENSRROG00000029666 Golden snub-nosed monkey MODERN SPECIES 2293 SLC35B3 (ENSRROG00000042188) ENSRROG00000034778 BLOC1S5 (ENSRROG00000043572) ENSRROG00000043599 TXNDC5 (ENSRROG00000032967) BMP6 (ENSRROG00000032319) SNRNP48 (ENSRROG00000043229) DSP (ENSRROG00000038096) ENSRROG00000039689 RIOK1 (ENSRROG00000036611) CAGE1 (ENSRROG00000044698) ENSRROG00000037141 ##22 SSR1 (ENSRROG00000035450) RREB1 (ENSRROG00000039603) LY86 (ENSRROG00000002665) Golden snub-nosed monkey MODERN SPECIES 1200 RHOBTB1 (ENSRROG00000038093) CDK1 (ENSRROG00000043415) ENSRROG00000041085 ANK3 (ENSRROG00000007163) ENSRROG00000030358 CCDC6 (ENSRROG00000035795) ENSRROG00000039976 ##22 MRLN (ENSRROG00000005710) SLC16A9 (ENSRROG00000033335) ENSRROG00000008761 Hominoidea ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Gibbon MODERN SPECIES 1 MCCC1 (ENSNLEG00000005989) LAMP3 (ENSNLEG00000006034) MCF2L2 (ENSNLEG00000006037) B3GNT5 (ENSNLEG00000018942) ENSNLEG00000006063 KLHL24 (ENSNLEG00000006066) YEATS2 (ENSNLEG00000006070) ENSNLEG00000034670 PARL (ENSNLEG00000006072) ABCC5 (ENSNLEG00000006079) ENSNLEG00000035193 ENSNLEG00000034463 HTR3C (ENSNLEG00000026619) HTR3E (ENSNLEG00000026869) EIF2B5 (ENSNLEG00000006103) ENSNLEG00000029322 ##22 DVL3 (ENSNLEG00000006124) AP2M1 (ENSNLEG00000006139) ABCF3 (ENSNLEG00000006173) VWA5B2 (ENSNLEG00000006214) ALG3 (ENSNLEG00000006230) ECE2 (ENSNLEG00000006276) PSMD2 (ENSNLEG00000006305) EIF4G1 (ENSNLEG00000006350) FAM131A (ENSNLEG00000027935) CLCN2 (ENSNLEG00000006373) ENSNLEG00000029447 THPO (ENSNLEG00000006409) CHRD (ENSNLEG00000006417) ENSNLEG00000018953 EPHB3 (ENSNLEG00000006254) Hominidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Pan ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a.t ##22 Bonobo MODERN SPECIES 7 ENSPPAG00000039581 GABARAPL2 (ENSPPAG00000033266) ADAT1 (ENSPPAG00000035006) KARS1 (ENSPPAG00000036192) TERF2IP (ENSPPAG00000043242) DUXB (ENSPPAG00000028561) ENSPPAG00000037627 CNTNAP4 (ENSPPAG00000005772) MON1B (ENSPPAG00000030166) SYCE1L (ENSPPAG00000040039) ADAMTS18 (ENSPPAG00000003071) NUDT7 (ENSPPAG00000039743) VAT1L (ENSPPAG00000027927) CLEC3A (ENSPPAG00000022224) WWOX (ENSPPAG00000038043) ENSPPAG00000020043 ##22 ENSPPAG00000025636 CDYL2 (ENSPPAG00000033654) ENSPPAG00000031935 CENPN (ENSPPAG00000036057) ENSPPAG00000017223 C16orf46 (ENSPPAG00000040845) ENSPPAG00000014722 ENSPPAG00000038301 BCO1 (ENSPPAG00000013810) GAN (ENSPPAG00000040205) CMIP (ENSPPAG00000042404) PLCG2 (ENSPPAG00000039636) SDR42E1 (ENSPPAG00000033148) HSD17B2 (ENSPPAG00000037971) MPHOSPH6 (ENSPPAG00000040858) Chimpanzee MODERN SPECIES 7 KARS1 (ENSPTRG00000008364) TERF2IP (ENSPTRG00000008365) CPHXL2 (ENSPTRG00000045796) DUXB (ENSPTRG00000033728) CPHXL (ENSPTRG00000052208) ENSPTRG00000047564 CNTNAP4 (ENSPTRG00000008367) MON1B (ENSPTRG00000008370) SYCE1L (ENSPTRG00000031140) ADAMTS18 (ENSPTRG00000008372) NUDT7 (ENSPTRG00000008373) VAT1L (ENSPTRG00000008374) CLEC3A (ENSPTRG00000008375) WWOX (ENSPTRG00000008376) ENSPTRG00000049801 ENSPTRG00000047655 ##22 MAF (ENSPTRG00000045874) DYNLRB2 (ENSPTRG00000008379) CDYL2 (ENSPTRG00000008380) CMC2 (ENSPTRG00000008382) CENPN (ENSPTRG00000008383) ATMIN (ENSPTRG00000008384) C16H16orf46 (ENSPTRG00000008385) GCSH (ENSPTRG00000008386) ENSPTRG00000043634 BCO1 (ENSPTRG00000008389) GAN (ENSPTRG00000008391) CMIP (ENSPTRG00000008393) ENSPTRG00000052311 ENSPTRG00000042898 PLCG2 (ENSPTRG00000008395) Gorilla MODERN SPECIES 4 B3GLCT (ENSGGOG00000002840) RXFP2 (ENSGGOG00000002645) ENSGGOG00000023700 FRY (ENSGGOG00000007253) ZAR1L (ENSGGOG00000015803) BRCA2 (ENSGGOG00000015808) N4BP2L1 (ENSGGOG00000015849) ENSGGOG00000025412 ENSGGOG00000025225 ENSGGOG00000040611 PDS5B (ENSGGOG00000004950) ENSGGOG00000007260 STARD13 (ENSGGOG00000006398) RFC3 (ENSGGOG00000017192) NBEA (ENSGGOG00000011724) ENSGGOG00000037758 ##22 MAB21L1 (ENSGGOG00000011768) DCLK1 (ENSGGOG00000006447) SOHLH2 (ENSGGOG00000002130) SPART (ENSGGOG00000014695) CCNA1 (ENSGGOG00000025062) SERTM1 (ENSGGOG00000040932) RFXAP (ENSGGOG00000025564) SMAD9 (ENSGGOG00000001017) ENSGGOG00000040246 ENSGGOG00000037488 ALG5 (ENSGGOG00000003094) EXOSC8 (ENSGGOG00000011902) SUPT20H (ENSGGOG00000011916) CSNK1A1L (ENSGGOG00000000169) ENSGGOG00000023061 Atlantogenata ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Xenarthra ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Armadillo DUPLICATION Armadillo MODERN SPECIES 1586 ENSDNOG00000010444 ENSDNOG00000009318 PLA2G5 (ENSDNOG00000018620) PLA2G2D (ENSDNOG00000041495) PLA2G2F (ENSDNOG00000018866) PLA2G2C (ENSDNOG00000018867) VWA5B1 (ENSDNOG00000003196) ENSDNOG00000046954 MUL1 (ENSDNOG00000044788) FAM43B (ENSDNOG00000031017) CDA (ENSDNOG00000003397) PINK1 (ENSDNOG00000000596) DDOST (ENSDNOG00000003401) SH2D5 (ENSDNOG00000034909) HP1BP3 (ENSDNOG00000001922) ENSDNOG00000032230 ##22 EIF4G3 (ENSDNOG00000001924) ENSDNOG00000043882 ECE1 (ENSDNOG00000043588) Armadillo MODERN SPECIES 1640 MTREX (ENSDNOG00000015375) PLPP1 (ENSDNOG00000049669) ENSDNOG00000041710 ##22 ENSDNOG00000040440 SLC38A9 (ENSDNOG00000034408) DDX4 (ENSDNOG00000011658) IL6ST (ENSDNOG00000014804) ANKRD55 (ENSDNOG00000014159) Marsupialia ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Marsupialia_b ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000000850 ENSSHAG00000004382 ENSSHAG00000024171 EPHA3 (ENSSHAG00000002306) ENSSHAG00000030102 ENSSHAG00000023777 ENSSHAG00000020927 ENSSHAG00000029589 C3orf38 (ENSSHAG00000008243) ZNF654 (ENSSHAG00000030905) CGGBP1 (ENSSHAG00000030050) HTR1F (ENSSHAG00000023648) ENSSHAG00000008747 CHMP2B (ENSSHAG00000023278) ENSSHAG00000001836 ENSSHAG00000021081 ##22 ENSSHAG00000013236 ENSSHAG00000016491 ENSSHAG00000000936 ENSSHAG00000003799 ENSSHAG00000030581 ENSSHAG00000025373 ENSSHAG00000003760 ENSSHAG00000032388 ENSSHAG00000022641 RNF149 (ENSSHAG00000007065) MAP4K4 (ENSSHAG00000002416) ENSSHAG00000002423 IL1R1 (ENSSHAG00000005754) ENSSHAG00000028997 ENSSHAG00000007642 Diprotodontia ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Diprotodontia_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 koala MODERN SPECIES 51 SLC6A15 (ENSPCIG00000027156) ENSPCIG00000011311 TMTC2 (ENSPCIG00000032378) METTL25 (ENSPCIG00000007809) CCDC59 (ENSPCIG00000007808) PPFIA2 (ENSPCIG00000024777) ACSS3 (ENSPCIG00000035215) LIN7A (ENSPCIG00000029151) MYF5 (ENSPCIG00000029150) MYF6 (ENSPCIG00000029149) PTPRQ (ENSPCIG00000029148) OTOGL (ENSPCIG00000026368) PPP1R12A (ENSPCIG00000026366) PAWR (ENSPCIG00000026365) SYT1 (ENSPCIG00000032719) ENSPCIG00000026362 ##22 NAV3 (ENSPCIG00000025666) E2F7 (ENSPCIG00000025823) CSRP2 (ENSPCIG00000005894) ZDHHC17 (ENSPCIG00000005890) Common wonbat MODERN SPECIES 1106 JKAMP (ENSVURG00010018038) RTN1 (ENSVURG00010018044) LRRC9 (ENSVURG00010018060) PCNX4 (ENSVURG00010018089) DHRS7 (ENSVURG00010018100) PPM1A (ENSVURG00010018120) C14orf39 (ENSVURG00010018124) SIX6 (ENSVURG00010018134) SIX1 (ENSVURG00010018138) SIX4 (ENSVURG00010018145) MNAT1 (ENSVURG00010018151) TRMT5 (ENSVURG00010018162) SLC38A6 (ENSVURG00010018165) ENSVURG00010018175 PRKCH (ENSVURG00010018178) ENSVURG00010018185 ##22 HIF1A (ENSVURG00010018203) ENSVURG00010018234 SNAPC1 (ENSVURG00010018237) SYT16 (ENSVURG00010018246) ENSVURG00010018253 KCNH5 (ENSVURG00010018260) RHOJ (ENSVURG00010018284) GPHB5 (ENSVURG00010018287) PPP2R5E (ENSVURG00010018299) WDR89 (ENSVURG00010018307) SGPP1 (ENSVURG00010018320) SYNE2 (ENSVURG00010018407) ESR2 (ENSVURG00010018788) Actinopterygii ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Neopterygii ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Otomorpha ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Otophysi ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Characiphysae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Characiphysae_b ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Electric eel MODERN SPECIES 134 ENSEEEG00000023375 SLITRK3 (ENSEEEG00000023455) ENSEEEG00000023456 ENSEEEG00000023458 P2RY6 (ENSEEEG00000023459) ARHGEF17 (ENSEEEG00000023460) relt (ENSEEEG00000023462) P2RY2 (ENSEEEG00000023463) FCHSD2 (ENSEEEG00000023467) ENSEEEG00000023507 ENSEEEG00000023509 ##22 KCTD14 (ENSEEEG00000023513) INTS4 (ENSEEEG00000023515) aamdc (ENSEEEG00000023516) ENSEEEG00000023518 clns1a (ENSEEEG00000023523) aqp11 (ENSEEEG00000023526) pak1 (ENSEEEG00000023532) GDPD4 (ENSEEEG00000023572) myo7aa (ENSEEEG00000023580) capn5a (ENSEEEG00000023586) dcun1d5 (ENSEEEG00000023587) eif2a (ENSEEEG00000023596) serp1 (ENSEEEG00000023601) pcyt1ab (ENSEEEG00000023605) mmp23bb (ENSEEEG00000023630) Euteleosteomorpha ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Protacanthopterygii ANCESTRAL SPECIES 556 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00940000160762 Salmoninae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00390000010063.ob.b ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a.k ENSGT00940000156251.a.k.b ENSGT00940000155350.g.f ENSGT00390000009497.b.c ENSGT00940000156536.e.b.a ENSGT00940000156155.l ENSGT00940000156648.c.b.a ENSGT00390000015655.a.m.a.e ENSGT00940000158415 ENSGT00530000063882.b.lb.b ENSGT00940000171017.c ENSGT00940000165563.b ENSGT00940000167717 ENSGT00390000008610.a.b.a.a.a ##22 ENSGT00940000160762 ENSGT00950000183023.B.h.b.a ENSGT00950000183048.b.b.a.b.b.a.a ENSGT00950000183023.B.h.a.a.b ENSGT00950000183048.b.b.a.a.b.a ENSGT00940000162428.k ENSGT00940000166839.h ENSGT01050000244808.D.c.b ENSGT00940000155435.A.a.b ENSGT00390000005104.c ENSGT00940000157030.c.b.b ENSGT01050000244891.C.c.a.k ENSGT00940000165917.j ENSGT00900000141094.w ENSGT01000000215257.a Salmo ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 River trout MODERN SPECIES 4 CUL5 (ENSSTUG00000042001) SLC35F2 (ENSSTUG00000041945) KBTBD3 (ENSSTUG00000041914) ENSSTUG00000041905 ENSSTUG00000041888 ENSSTUG00000041871 polr2d (ENSSTUG00000041843) ENSSTUG00000040028 mab21l1 (ENSSTUG00000039954) NBEA (ENSSTUG00000035161) dclk1b (ENSSTUG00000033362) spartb (ENSSTUG00000033313) panx1a (ENSSTUG00000033302) aamdc (ENSSTUG00000033299) INTS4 (ENSSTUG00000020112) ENSSTUG00000020041 ##22 KCTD14 (ENSSTUG00000020032) ENSSTUG00000020014 ENSSTUG00000020003 ENSSTUG00000019998 ENSSTUG00000019989 ENSSTUG00000019981 ENSSTUG00000019979 ENSSTUG00000019976 ENSSTUG00000019932 ENSSTUG00000019928 ENSSTUG00000019924 ENSSTUG00000019911 ENSSTUG00000019904 ENSSTUG00000019887 ENSSTUG00000019885 Oncorhynchus ANCESTRAL SPECIES 177 ENSGT00950000183061.a.b.a.a.c ENSGT01050000244827.C.c.a.b.f ENSGT00940000154934.B.gb.a ENSGT00940000154956.sb.a.d ENSGT00390000012235.k.f ENSGT00940000153972.A.a.g.a ENSGT00390000011958.w ENSGT00390000010128.hb.a ENSGT00390000008610.a.b.a.a.a ##22 Oncorhynchus_a ANCESTRAL SPECIES 252 ENSGT00950000183061.a.b.a.a.c ENSGT00940000154934.B.gb.a ENSGT01050000244827.C.c.a.b.f ENSGT00940000154956.sb.a.d ENSGT00390000012235.k.f ENSGT00940000153972.A.a.g.a ENSGT00390000011958.w ENSGT00390000010128.hb.a ENSGT00390000008610.a.b.a.a.a ##22 Chinook salmon MODERN SPECIES 5 GDPD4 (ENSOTSG00005038115) ompa (ENSOTSG00005038113) CAPN5 (ENSOTSG00005038107) dcun1d5 (ENSOTSG00005037874) CUL5 (ENSOTSG00005037860) SLC35F2 (ENSOTSG00005037853) KBTBD3 (ENSOTSG00005037852) ENSOTSG00005037847 mab21l1 (ENSOTSG00005037844) NBEA (ENSOTSG00005037362) dclk1b (ENSOTSG00005035911) spartb (ENSOTSG00005035893) panx1a (ENSOTSG00005035890) aamdc (ENSOTSG00005035887) INTS4 (ENSOTSG00005035857) ENSOTSG00005035851 ##22 KCTD14 (ENSOTSG00005035850) ENSOTSG00005035849 ENSOTSG00005035847 ENSOTSG00005035846 ENSOTSG00005035844 ENSOTSG00005035843 ENSOTSG00005035841 ENSOTSG00005035840 ENSOTSG00005035839 ENSOTSG00005035837 ENSOTSG00005035836 ENSOTSG00005035835 ENSOTSG00005035834 ENSOTSG00005035833 ENSOTSG00005035832 Acanthomorphata ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Eupercaria ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Tetraodontidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Tetraodon MODERN SPECIES 26 ENSTNIG00000006446 gap43 (ENSTNIG00000006445) MPZL3 (ENSTNIG00000006444) ENSTNIG00000001427 ENSTNIG00000000578 ENSTNIG00000006443 TMEM25 (ENSTNIG00000006442) SIK3 (ENSTNIG00000006441) med17 (ENSTNIG00000006440) ENSTNIG00000006439 TRPV2 (ENSTNIG00000006438) FAM222B (ENSTNIG00000006437) flot2b (ENSTNIG00000006436) SLC35F2 (ENSTNIG00000002451) CAPN5 (ENSTNIG00000006028) ENSTNIG00000006029 ##22 KCTD14 (ENSTNIG00000000489) nccrp1 (ENSTNIG00000006031) INTS4 (ENSTNIG00000006032) aamdc (ENSTNIG00000001406) panx1a (ENSTNIG00000006033) ENSTNIG00000006034 ENSTNIG00000002759 ENSTNIG00000005593 ENSTNIG00000005592 RCE1 (ENSTNIG00000005591) fat3a (ENSTNIG00000005590) blmh (ENSTNIG00000004782) slc6a4a (ENSTNIG00000004783) ankrd13b (ENSTNIG00000004784) GIT1 (ENSTNIG00000004785) Percomorphaceae_D ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Carangaria ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Carangaria_A ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Seriola ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Yellowtail amberjack MODERN SPECIES 1821 ENSSLDG00000009063 ##22 Ovalentaria ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Atherinomorphae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Oryzias ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Oryzias_b ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Indian medaka MODERN SPECIES 713 ENSOMEG00000013827 ##22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Pomacentridae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Pomacentridae_A ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 1816 atp1b3b (ENSAPOG00000001576) NYAP2 (ENSAPOG00000001571) ENSAPOG00000001563 ENSAPOG00000001552 ENSAPOG00000001551 ##22 ENSAPOG00000001543 ##22 Spiny chromis MODERN SPECIES 1816 atp1b3b (ENSAPOG00000001576) NYAP2 (ENSAPOG00000001571) ENSAPOG00000001563 ENSAPOG00000001552 ENSAPOG00000001551 ##22 ENSAPOG00000001543 ##22 Cichlidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Haplochromini ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 Haplochromini_A ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.a ##22 P. nyererei MODERN SPECIES 371 chp2 (ENSPNYG00000008116) dlc (ENSPNYG00000008076) timm50 (ENSPNYG00000008018) ENSPNYG00000007827 CLIP3 (ENSPNYG00000007761) ENSPNYG00000007746 ENSPNYG00000007718 ENSPNYG00000007703 CAPNS1 (ENSPNYG00000007686) zgc:101731 (ENSPNYG00000007668) ENSPNYG00000007656 si:cabz01090165.1 (ENSPNYG00000007551) ENSPNYG00000007520 ENSPNYG00000007502 ENSPNYG00000007486 ENSPNYG00000007471 ##22 rps3 (ENSPNYG00000007419) ##22 KCTD14 (ENSPNYG00000007400) ENSPNYG00000007380 INTS4 (ENSPNYG00000007308) aamdc (ENSPNYG00000007256) eif3k (ENSPNYG00000007217) zgc:85932 (ENSPNYG00000007187) ACTN4 (ENSPNYG00000006323) ENSPNYG00000006113 slc8a2b (ENSPNYG00000006063) ENSPNYG00000006045 ENSPNYG00000006014 srsf7a (ENSPNYG00000005994) hnrnpl2 (ENSPNYG00000005642) ENSPNYG00000005569 Euteleostomi ANCESTRAL SPECIES 37 ENSGT00940000177223 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000164201 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a ENSGT00390000016511 Actinopterygii ANCESTRAL SPECIES 5 ENSGT00390000000083.b ENSGT00940000160816 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155207.a.b ENSGT00670000098061 ENSGT00390000012388 ENSGT01030000234626.E ENSGT00940000167100 ENSGT00940000154907.a.a ENSGT00940000166189 Neopterygii ANCESTRAL SPECIES 57 ENSGT00390000004601 ENSGT00940000160633 ENSGT00550000074891 ENSGT00940000156040 ENSGT01030000234646.B.a.b ENSGT00940000163831 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000164201.d ENSGT00940000155207.a.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000160903 ENSGT00940000156340.b ENSGT00940000161277 Spotted gar MODERN SPECIES 669 SPAG16 (ENSLOCG00000017443) hgd (ENSLOCG00000001925) arxa (ENSLOCG00000001912) pola1 (ENSLOCG00000001836) pcyt1bb (ENSLOCG00000001818) pdk3b (ENSLOCG00000001784) slc51a (ENSLOCG00000001773) zdhhc20a (ENSLOCG00000001760) micu2 (ENSLOCG00000001747) FGF9 (ENSLOCG00000001730) sgcg (ENSLOCG00000001705) SACS (ENSLOCG00000001682) TNFRSF19 (ENSLOCG00000001649) MIPEP (ENSLOCG00000001633) BRWD1 (ENSLOCG00000001608) GET1 (ENSLOCG00000001591) ##22 ENSLOCG00000001582 SH3BGR (ENSLOCG00000001571) ENSLOCG00000001556 pcp4a (ENSLOCG00000001548) DSCAM (ENSLOCG00000001471) bace2 (ENSLOCG00000001455) FAM3B (ENSLOCG00000001440) ENSLOCG00000001408 tmprss2 (ENSLOCG00000001392) ATM (ENSLOCG00000001332) ENSLOCG00000001312 ENSLOCG00000001296 MMP7 (ENSLOCG00000001263) ENSLOCG00000001242 ENSLOCG00000001235 Osteoglossocephalai ANCESTRAL SPECIES 73 ENSGT00950000182942.b.f ENSGT00940000157165 ENSGT00390000010608 ENSGT00390000013374 ENSGT00990000205362 ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00940000165905 ENSGT00940000165615.a ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000160903 ENSGT00940000156340.b ENSGT00940000166189 ENSGT00940000155207.a.b.i.a Clupeocephala ANCESTRAL SPECIES 270 ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00980000198612 ENSGT00940000165905 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 Euteleosteomorpha ANCESTRAL SPECIES 7 ENSGT00990000204162 ENSGT00550000075063 ENSGT00390000017608.k.b ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00980000198612 ENSGT00940000165905 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154203 Protacanthopterygii ANCESTRAL SPECIES 15 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.k.a ENSGT00390000017608.k.b ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00950000185233 ENSGT00390000004856 ENSGT00940000159187.k ENSGT00390000016695 ENSGT00940000153259.a.a.b.g ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000156017.fb ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00390000013680.b.b ENSGT00870000136508.c.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 632 ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00730000111174.o ENSGT00730000111086.j ENSGT00940000153761.B.eb ENSGT00390000004856.o.a ENSGT00940000159187.k.b ENSGT00390000016695.v ENSGT00940000153259.a.a.b.g.a ENSGT00950000183107.a.b.a.e.a ENSGT00390000008610.a.b.a.a.b.a ##22 ENSGT00950000183107.a.b.a.e.b ENSGT00390000008610.a.b.a.a.b.b ##22 ENSGT00560000077266.b.p ENSGT00940000159847.f.a.b Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00990000204162.d ENSGT00550000075063.u ENSGT00940000161006.n ENSGT00940000160678.a.lc.a ENSGT00390000017608.k.a ENSGT00940000156765.a.a.m.b ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00730000111174.o ENSGT00730000111086.j ENSGT00940000153761.B.eb ENSGT00390000004856.o.a ENSGT00940000159187.k.b ENSGT00390000016695.v ENSGT00940000153259.a.a.b.g.a ENSGT00950000183107.a.b.a.e.a ENSGT00390000008610.a.b.a.a.b.a ##22 ENSGT00950000183107.a.b.a.e.b ENSGT00390000008610.a.b.a.a.b.b ##22 ENSGT00560000077266.b.p ENSGT00940000159847.f.a.b ENSGT00940000159847.e ENSGT00530000064267.m ENSGT00940000154678.a.a.m.a ENSGT00940000159548.n ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388.d ENSGT00940000154308.A.b.a.a.a.a ENSGT00390000007230.b.c ENSGT00940000157069.d ENSGT00940000154203 Salmo ANCESTRAL SPECIES 22 ENSGT00550000075063.v ENSGT00940000161006.n ENSGT00940000160678.a.lc.a ENSGT00390000017608.k.b.a ENSGT00940000156765.a.a.n ENSGT00940000156765.a.a.m.b ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00730000111174.o ENSGT00730000111086.j ENSGT00940000153761.B.eb ENSGT00390000004856.o.a ENSGT00940000159187.k.b ENSGT00390000016695.v ENSGT00940000153259.a.a.b.g.a ENSGT00950000183107.a.b.a.e.a ENSGT00390000008610.a.b.a.a.b.a ##22 ENSGT00560000077266.b.p ENSGT00940000159847.e ENSGT00530000064267.m ENSGT00940000154678.a.a.m.a ENSGT00940000159548.n ENSGT00940000155207.a.b.i.b ENSGT00670000098061.ec ENSGT00390000012388.d ENSGT00940000154308.A.b.a.a.a.a ENSGT00390000007230.b.c ENSGT00940000157069.d ENSGT00940000154203 ENSGT00940000155062.b.d.a.e ENSGT00390000013680.b.b.k.a ENSGT00940000154823.f River trout MODERN SPECIES 4 ENSSTUG00000031010 polr2i (ENSSTUG00000031006) pglyrp5 (ENSSTUG00000030997) ENSSTUG00000030994 SNRPD2 (ENSSTUG00000030986) VASP (ENSSTUG00000030972) cltcb (ENSSTUG00000030472) cfap45 (ENSSTUG00000030398) slc37a4a (ENSSTUG00000030372) trappc4 (ENSSTUG00000030342) rps25 (ENSSTUG00000030267) sgcg (ENSSTUG00000030248) SACS (ENSSTUG00000030213) tnfrsf19 (ENSSTUG00000030193) BRWD1 (ENSSTUG00000029657) GET1 (ENSSTUG00000029614) ##22 ENSSTUG00000029610 sh3bgr (ENSSTUG00000029565) PCP4 (ENSSTUG00000029546) DSCAM (ENSSTUG00000049801) bace2 (ENSSTUG00000049778) TMPRSS2 (ENSSTUG00000049766) ATM (ENSSTUG00000048910) ENSSTUG00000048847 ENSSTUG00000048843 vmp1 (ENSSTUG00000048793) tubd1 (ENSSTUG00000048781) rps6kb1b (ENSSTUG00000048572) med13b (ENSSTUG00000047840) ENSSTUG00000047778 zgc:112083 (ENSSTUG00000047772) Huchen MODERN SPECIES 1640 ENSHHUG00000035075 cfap45 (ENSHHUG00000035037) slc37a4a (ENSHHUG00000035032) trappc4 (ENSHHUG00000034966) rps25 (ENSHHUG00000034890) sgcg (ENSHHUG00000034871) SACS (ENSHHUG00000034855) tnfrsf19 (ENSHHUG00000034838) ENSHHUG00000034782 GET1 (ENSHHUG00000034757) ##22 LCA5L (ENSHHUG00000034744) SH3BGR (ENSHHUG00000034709) Salmoninae ANCESTRAL SPECIES 632 ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00730000111174.o ENSGT00730000111086.j ENSGT00940000153761.B.eb ENSGT00390000004856.o.a ENSGT00940000159187.k.b ENSGT00390000016695.v ENSGT00940000153259.a.a.b.g.a ENSGT00950000183107.a.b.a.e.a ENSGT00390000008610.a.b.a.a.b.a ##22 ENSGT00950000183107.a.b.a.e.b ENSGT00390000008610.a.b.a.a.b.b ##22 ENSGT00560000077266.b.p ENSGT00940000159847.f.a.b Huchen MODERN SPECIES 1463 ENSHHUG00000047015 MIPEP (ENSHHUG00000046953) ENSHHUG00000046943 GET1 (ENSHHUG00000046906) ##22 ENSHHUG00000046903 SH3BGRL (ENSHHUG00000046877) ENSHHUG00000046870 mfsd14a2 (ENSHHUG00000046868) ENSHHUG00000046865 ENSHHUG00000046864 SLA (ENSHHUG00000046853) ENSHHUG00000046817 Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00940000161006.n ENSGT00940000160678.a.lc.a ENSGT00390000017608.k.a ENSGT00940000156765.a.a.m.b ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00730000111174.o ENSGT00730000111086.j ENSGT00940000153761.B.eb ENSGT00390000004856.o.a ENSGT00940000159187.k.b ENSGT00390000016695.v ENSGT00940000153259.a.a.b.g.a ENSGT00950000183107.a.b.a.e.a ENSGT00390000008610.a.b.a.a.b.a ##22 ENSGT00950000183107.a.b.a.e.b ENSGT00390000008610.a.b.a.a.b.b ##22 ENSGT00560000077266.b.p ENSGT00940000159847.f.a.b ENSGT00940000159847.e ENSGT00530000064267.m ENSGT00940000154678.a.a.m.a ENSGT00940000159548.n ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388.d ENSGT00940000154308.A.b.a.a.a.a ENSGT00390000007230.b.c ENSGT00940000157069.d ENSGT00940000154203 ENSGT00940000155062.b.d.a.e ENSGT00390000013680.b.b.k.a Oncorhynchus ANCESTRAL SPECIES 14 ENSGT00990000204162.d ENSGT00550000075063.u ENSGT00940000161006.n ENSGT00940000160678.a.lc.a ENSGT00390000017608.k.a ENSGT00940000156765.a.a.m.b ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00730000111174.o ENSGT00730000111086.j.b ENSGT00940000153761.B.eb ENSGT00390000004856.o.a ENSGT00940000159187.k.b ENSGT00390000016695.v ENSGT00940000153259.a.a.b.g.a ENSGT00950000183107.a.b.a.e.a ENSGT00390000008610.a.b.a.a.b.b ##22 ENSGT00560000077266.b.p ENSGT00940000159847.f.a.b ENSGT00530000064267.m ENSGT00940000154678.a.a.m.a ENSGT00940000159548.n ENSGT00670000098061 ENSGT00390000012388.d ENSGT00940000154308.A.b.a.a.a.a ENSGT00390000007230.b.c ENSGT00940000157069.d ENSGT00940000155062.b.d.a.e ENSGT00390000013680.b.b.k.a ENSGT00940000154823.f ENSGT00870000136508.c.b.g ENSGT00530000063947.C.c.c #27 Rainbow trout MODERN SPECIES 16 pglyrp5 (ENSOMYG00000037788) ENSOMYG00000037780 ENSOMYG00000037766 ENSOMYG00000037738 ENSOMYG00000035945 ENSOMYG00000035642 ENSOMYG00000033985 slc37a4a (ENSOMYG00000035630) trappc4 (ENSOMYG00000035598) RPS25 (ENSOMYG00000035561) ENSOMYG00000053574 sgcg (ENSOMYG00000035538) ENSOMYG00000035526 TNFRSF19 (ENSOMYG00000035498) BRWD1 (ENSOMYG00000035122) GET1 (ENSOMYG00000034958) ##22 ENSOMYG00000034950 sh3bgr (ENSOMYG00000034919) PCP4 (ENSOMYG00000066852) ENSOMYG00000068438 ENSOMYG00000034752 bace2 (ENSOMYG00000034678) ENSOMYG00000034665 ENSOMYG00000034525 ENSOMYG00000034295 ENSOMYG00000034276 ENSOMYG00000034026 ENSOMYG00000033692 med13b (ENSOMYG00000030822) ENSOMYG00000030177 zgc:112083 (ENSOMYG00000030130) Oncorhynchus_a ANCESTRAL SPECIES 32 ENSGT00990000204162.d ENSGT00550000075063.u ENSGT00940000161006.n ENSGT00940000160678.a.lc.a ENSGT00390000017608.k.a ENSGT00940000156765.a.a.m.b ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00730000111174.o ENSGT00730000111086.j.b ENSGT00940000153761.B.eb ENSGT00390000004856.o.a ENSGT00940000159187.k.b ENSGT00390000016695.v ENSGT00940000153259.a.a.b.g.a ENSGT00950000183107.a.b.a.e.a ENSGT00390000008610.a.b.a.a.b.b ##22 ENSGT00560000077266.b.p ENSGT00940000159847.f.a.b ENSGT00530000064267.m ENSGT00940000154678.a.a.m.a ENSGT00940000159548.n ENSGT00670000098061 ENSGT00390000012388.d ENSGT00940000154308.A.b.a.a.a.a.a ENSGT00390000007230.b.c ENSGT00940000157069.d ENSGT00940000155062.b.d.a.e ENSGT00390000013680.b.b.k.a ENSGT00940000154823.f ENSGT00530000063947.C.c.c #27 ENSGT01030000234582.f.a.b.p.b #29 Chinook salmon MODERN SPECIES 5 ENSOTSG00005033967 polr2i (ENSOTSG00005033966) pglyrp5 (ENSOTSG00005033965) ENSOTSG00005033963 SNRPD2 (ENSOTSG00005015452) VASP (ENSOTSG00005015451) cltcb (ENSOTSG00005014714) cfap45 (ENSOTSG00005014709) slc37a4a (ENSOTSG00005014708) trappc4 (ENSOTSG00005014690) rps25 (ENSOTSG00005014688) sgcg (ENSOTSG00005014687) SACS (ENSOTSG00005014685) tnfrsf19 (ENSOTSG00005014683) ENSOTSG00005014611 GET1 (ENSOTSG00005014606) ##22 ENSOTSG00005014604 sh3bgr (ENSOTSG00005014599) ENSOTSG00005014594 DSCAM (ENSOTSG00005013132) bace2 (ENSOTSG00005013111) ENSOTSG00005013109 ATM (ENSOTSG00005013089) ENSOTSG00005013070 ENSOTSG00005013069 ENSOTSG00005013068 vmp1 (ENSOTSG00005013046) ENSOTSG00005013044 rps6kb1b (ENSOTSG00005012975) MED13 (ENSOTSG00005012848) ENSOTSG00005012845 Coho salmon MODERN SPECIES 9 ENSOKIG00005021328 polr2i (ENSOKIG00005021354) pglyrp5 (ENSOKIG00005021392) ENSOKIG00005021397 SNRPD2 (ENSOKIG00005021421) ENSOKIG00005021441 cfap45 (ENSOKIG00005021454) cltcb (ENSOKIG00005021524) slc37a4a (ENSOKIG00005022025) trappc4 (ENSOKIG00005022054) ENSOKIG00005022088 sgcg (ENSOKIG00005022120) SACS (ENSOKIG00005022146) TNFRSF19 (ENSOKIG00005022197) BRWD1 (ENSOKIG00005022332) GET1 (ENSOKIG00005024181) ##22 LCA5L (ENSOKIG00005024205) sh3bgr (ENSOKIG00005024237) PCP4 (ENSOKIG00005024307) DSCAM (ENSOKIG00005024367) bace2 (ENSOKIG00005024749) ATM (ENSOKIG00005024860) ENSOKIG00005025007 ENSOKIG00005013361 ENSOKIG00005013377 ENSOKIG00005013383 VMP1 (ENSOKIG00005013392) ENSOKIG00005013515 med13b (ENSOKIG00005013827) ENSOKIG00005013995 ENSOKIG00005014040 #27 Salmo ANCESTRAL SPECIES 7 ENSGT00990000204162.c ENSGT00940000161006.m ENSGT00940000160678.a.lc.b ENSGT00390000017608.k.b.b ENSGT00940000156765.a.a.m.a ENSGT00950000183166.a.a.a.b.e.a.d.b ENSGT00730000111174.p ENSGT00730000111086.i ENSGT00940000153761.B.db ENSGT00390000004856.o.b ENSGT00940000159187.k.a ENSGT00390000016695.u ENSGT00940000153259.a.a.b.g.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a.e.b ENSGT00390000008610.a.b.a.a.b.b ##22 ENSGT00560000077266.b.o ENSGT00940000159847.f.b ENSGT00940000165615.b ENSGT01030000235187.b.b ENSGT00940000154678.a.a.m.b ENSGT00940000159548.m ENSGT00670000098061.dc ENSGT00390000012388.c ENSGT00390000007230.b.d ENSGT00940000157069.c ENSGT00940000155062.b.d.a.f ENSGT00390000013680.b.b.k.b ENSGT00870000136508.c.b.h ENSGT00530000063947.C.c.d #27 ENSGT01030000234582.f.a.b.p.a #29 River trout MODERN SPECIES 18 ENSSTUG00000046303 pglyrp5 (ENSSTUG00000046294) ENSSTUG00000046286 SNRPD2 (ENSSTUG00000046267) VASP (ENSSTUG00000046259) cltcb (ENSSTUG00000045480) cfap45 (ENSSTUG00000045392) slc37a4a (ENSSTUG00000045385) trappc4 (ENSSTUG00000045346) rps25 (ENSSTUG00000045337) sgcg (ENSSTUG00000045324) SACS (ENSSTUG00000045288) tnfrsf19 (ENSSTUG00000045269) MIPEP (ENSSTUG00000043505) BRWD1 (ENSSTUG00000043308) GET1 (ENSSTUG00000043283) ##22 sh3bgr (ENSSTUG00000043092) ENSSTUG00000043037 ENSSTUG00000043011 bace2 (ENSSTUG00000040624) ENSSTUG00000040587 ENSSTUG00000040517 vmp1 (ENSSTUG00000039588) tubd1 (ENSSTUG00000039484) rps6kb1b (ENSSTUG00000038781) med13b (ENSSTUG00000037765) zgc:112083 (ENSSTUG00000037705) ENSSTUG00000037691 #27 DGAT2 (ENSSTUG00000037676) #29 WNT11 (ENSSTUG00000037604) #31 thap12b (ENSSTUG00000037593) #32 Atlantic salmon MODERN SPECIES 12 ENSSSAG00000047053 pglyrp5 (ENSSSAG00000047046) ENSSSAG00000078442 SMD2 (ENSSSAG00000078433) ENSSSAG00000120107 ENSSSAG00000078122 ENSSSAG00000078066 slc37a4a (ENSSSAG00000078057) RPS25 (ENSSSAG00000078018) trappc4 (ENSSSAG00000095081) sgcg (ENSSSAG00000078004) SACS (ENSSSAG00000077992) TNFRSF19 (ENSSSAG00000116770) MIPEP (ENSSSAG00000077681) BRWD1 (ENSSSAG00000076419) GET1 (ENSSSAG00000099223) ##22 ENSSSAG00000076366 sh3bgr (ENSSSAG00000076342) ENSSSAG00000105438 ENSSSAG00000076326 ENSSSAG00000076303 bace2 (ENSSSAG00000076277) ENSSSAG00000088954 ENSSSAG00000102380 ENSSSAG00000095706 vmp1 (ENSSSAG00000076254) tubd1 (ENSSSAG00000076249) rps6kb1b (ENSSSAG00000038645) med13b (ENSSSAG00000075136) zgc:112083 (ENSSSAG00000075048) ma6d1 (ENSSSAG00000075045) #27 Northern pike MODERN SPECIES polr2i (ENSELUG00000018012) ENSELUG00000018042 cltcb (ENSELUG00000018151) cfap45 (ENSELUG00000018190) ENSELUG00000027971 cfap45 (ENSELUG00000030567) slc37a4a (ENSELUG00000018208) trappc4 (ENSELUG00000018229) rps25 (ENSELUG00000034566) ENSELUG00000031784 sgcg (ENSELUG00000018259) SACS (ENSELUG00000018309) tnfrsf19 (ENSELUG00000018329) MIPEP (ENSELUG00000018354) BRWD1 (ENSELUG00000018454) GET1 (ENSELUG00000018486) ##22 ENSELUG00000018496 sh3bgr (ENSELUG00000018547) PCP4 (ENSELUG00000029251) ENSELUG00000031958 DSCAM (ENSELUG00000018635) bace2 (ENSELUG00000018655) ATM (ENSELUG00000019146) ENSELUG00000019191 vmp1 (ENSELUG00000019247) tubd1 (ENSELUG00000019274) rps6kb1b (ENSELUG00000019321) med13b (ENSELUG00000019446) ENSELUG00000019466 zgc:112083 (ENSELUG00000019494) ENSELUG00000019513 #27 Acanthomorphata ANCESTRAL SPECIES 37 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00980000198612 ENSGT00940000165905 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a Euacanthomorphacea ANCESTRAL SPECIES 8 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00980000198612 ENSGT00940000165905 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00940000178743 ENSGT00940000165615.a ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 Pinecone sodierfish MODERN SPECIES 4 pglyrp5 (ENSMMDG00005006682) ENSMMDG00005006684 snrpd2 (ENSMMDG00005006685) VASP (ENSMMDG00005006688) cltcb (ENSMMDG00005006704) cfap45 (ENSMMDG00005008215) slc37a4a (ENSMMDG00005008222) trappc4 (ENSMMDG00005008227) rps25 (ENSMMDG00005008239) sgcg (ENSMMDG00005008249) SACS (ENSMMDG00005008283) ENSMMDG00005008284 tnfrsf19 (ENSMMDG00005008287) MIPEP (ENSMMDG00005008358) BRWD1 (ENSMMDG00005011464) GET1 (ENSMMDG00005012047) ##22 sh3bgr (ENSMMDG00005012051) ENSMMDG00005012054 DSCAM (ENSMMDG00005012058) bace2 (ENSMMDG00005012072) ENSMMDG00005012284 ATM (ENSMMDG00005012316) ENSMMDG00005013525 vmp1 (ENSMMDG00005013529) tubd1 (ENSMMDG00005013533) RPS6KB1 (ENSMMDG00005013554) slc33a1 (ENSMMDG00005016008) gmps (ENSMMDG00005016018) ENSMMDG00005017131 kcnab1a (ENSMMDG00005017454) ssr3 (ENSMMDG00005017456) Percomorphaceae ANCESTRAL SPECIES 8 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00980000198612 ENSGT00940000165905 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a Tiger tail seahorse MODERN SPECIES 111 ENSHCOG00000010978 ENSHCOG00000010991 cltcb (ENSHCOG00000011070) cfap45 (ENSHCOG00000011098) trappc4 (ENSHCOG00000011115) rps25 (ENSHCOG00000011130) slc37a4a (ENSHCOG00000011159) trappc4 (ENSHCOG00000011182) rps25 (ENSHCOG00000011191) sgcg (ENSHCOG00000011196) SACS (ENSHCOG00000011214) tnfrsf19 (ENSHCOG00000011223) MIPEP (ENSHCOG00000011277) ENSHCOG00000011328 ENSHCOG00000011348 GET1 (ENSHCOG00000011367) ##22 sh3bgr (ENSHCOG00000011431) ENSHCOG00000011448 DSCAM (ENSHCOG00000011496) bace2 (ENSHCOG00000011505) TMPRSS2 (ENSHCOG00000011555) ENSHCOG00000011572 ENSHCOG00000011601 ENSHCOG00000011606 vmp1 (ENSHCOG00000011637) tubd1 (ENSHCOG00000011655) rps6kb1b (ENSHCOG00000011708) slc33a1 (ENSHCOG00000011734) gmps (ENSHCOG00000011768) ENSHCOG00000011815 kcnab1a (ENSHCOG00000011840) Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000177608 ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000156017.fb ENSGT00980000198612 ENSGT00940000165905 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 Ovalentaria ANCESTRAL SPECIES 8 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 Atherinomorphae ANCESTRAL SPECIES 187 ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000156017.fb Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856.v ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00940000165905 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000156017.fb ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 Aplocheiloidei ANCESTRAL SPECIES 50 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856.v ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000156017.fb ENSGT00530000064267 ENSGT00940000165905 ENSGT00940000159847 ENSGT01030000235087 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 Mangrove rivulus MODERN SPECIES 51 ENSKMAG00000001604 polr2i (ENSKMAG00000001567) pglyrp5 (ENSKMAG00000001559) snrpd2 (ENSKMAG00000001539) VASP (ENSKMAG00000001516) cltcb (ENSKMAG00000001324) cfap45 (ENSKMAG00000001182) slc37a4a (ENSKMAG00000001121) trappc4 (ENSKMAG00000001096) rps25 (ENSKMAG00000001088) sgcg (ENSKMAG00000001046) SACS (ENSKMAG00000000970) tnfrsf19 (ENSKMAG00000000938) MIPEP (ENSKMAG00000000843) ENSKMAG00000000800 GET1 (ENSKMAG00000000772) ##22 SH3BGRL (ENSKMAG00000000741) PCP4 (ENSKMAG00000000723) DSCAM (ENSKMAG00000000525) bace2 (ENSKMAG00000000463) ENSKMAG00000000451 ENSKMAG00000000424 ENSKMAG00000000398 ENSKMAG00000000385 vmp1 (ENSKMAG00000000301) tubd1 (ENSKMAG00000000289) rps6kb1b (ENSKMAG00000000145) slc33a1 (ENSKMAG00000020878) gmps (ENSKMAG00000020846) ENSKMAG00000020819 KCNAB1 (ENSKMAG00000020762) Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 Pomacentridae ANCESTRAL SPECIES 5 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000160678.a ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000156017.fb ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 Pomacentridae_A ANCESTRAL SPECIES 4 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000160678.a ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000156017.fb ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 Amphiprion ANCESTRAL SPECIES 6 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000160678.a ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000156017.fb ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 Clown anemonefish MODERN SPECIES 3409 sgcg (ENSAOCG00000024097) SACS (ENSAOCG00000024107) tnfrsf19 (ENSAOCG00000024121) MIPEP (ENSAOCG00000024152) BRWD1 (ENSAOCG00000024196) GET1 (ENSAOCG00000024215) ##22 ENSAOCG00000003106 SH3BGRL (ENSAOCG00000000079) ENSAOCG00000003134 PCP4 (ENSAOCG00000003144) DSCAM (ENSAOCG00000003164) bace2 (ENSAOCG00000003180) ENSAOCG00000003194 ATM (ENSAOCG00000003225) ENSAOCG00000003237 vmp1 (ENSAOCG00000003247) tubd1 (ENSAOCG00000003256) rps6kb1b (ENSAOCG00000003270) slc33a1 (ENSAOCG00000003278) gmps (ENSAOCG00000003292) ENSAOCG00000003302 Orange clownfish MODERN SPECIES 23 polr2i (ENSAPEG00000021748) pglyrp5 (ENSAPEG00000021734) ENSAPEG00000021721 snrpd2 (ENSAPEG00000021711) ENSAPEG00000021676 cltcb (ENSAPEG00000021354) cfap45 (ENSAPEG00000021279) slc37a4a (ENSAPEG00000021249) trappc4 (ENSAPEG00000021231) rps25 (ENSAPEG00000021211) sgcg (ENSAPEG00000021190) SACS (ENSAPEG00000021169) tnfrsf19 (ENSAPEG00000021145) MIPEP (ENSAPEG00000021052) BRWD1 (ENSAPEG00000020945) GET1 (ENSAPEG00000020919) ##22 sh3bgr (ENSAPEG00000020837) ENSAPEG00000020792 PCP4 (ENSAPEG00000020783) DSCAM (ENSAPEG00000020708) bace2 (ENSAPEG00000020666) ENSAPEG00000020652 ATM (ENSAPEG00000020503) ENSAPEG00000020478 vmp1 (ENSAPEG00000020424) tubd1 (ENSAPEG00000020380) rps6kb1b (ENSAPEG00000020308) slc33a1 (ENSAPEG00000020265) gmps (ENSAPEG00000020189) ENSAPEG00000020169 kcnab1a (ENSAPEG00000020132) Spiny chromis MODERN SPECIES 284 sgcg (ENSAPOG00000012872) SACS (ENSAPOG00000012936) tnfrsf19 (ENSAPOG00000012968) MIPEP (ENSAPOG00000013090) ENSAPOG00000013130 GET1 (ENSAPOG00000013162) ##22 sh3bgr (ENSAPOG00000013215) PCP4 (ENSAPOG00000013232) DSCAM (ENSAPOG00000013397) bace2 (ENSAPOG00000013476) TMPRSS2 (ENSAPOG00000013509) ATM (ENSAPOG00000014196) ENSAPOG00000014237 vmp1 (ENSAPOG00000014312) tubd1 (ENSAPOG00000014374) rps6kb1b (ENSAPOG00000014469) slc33a1 (ENSAPOG00000014524) Cichlidae ANCESTRAL SPECIES 25 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174.e ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT01030000235087 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 Pseudocrenilabrinae ANCESTRAL SPECIES 22 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174.e ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT01030000235087 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 Pseudocrenilabrinae_A ANCESTRAL SPECIES 25 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174.e ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT01030000236803 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 Haplochromini ANCESTRAL SPECIES 33 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174.e ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT01030000236803 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 Burton s mouthbrooder MODERN SPECIES 355 polr2i (ENSHBUG00000004140) pglyrp5 (ENSHBUG00000004120) ENSHBUG00000004079 snrpd2 (ENSHBUG00000004073) ENSHBUG00000004063 cltcb (ENSHBUG00000004050) cfap45 (ENSHBUG00000003980) slc37a4a (ENSHBUG00000003894) trappc4 (ENSHBUG00000000092) rps25 (ENSHBUG00000003855) sgcg (ENSHBUG00000003840) SACS (ENSHBUG00000003826) TNFRSF19 (ENSHBUG00000003803) MIPEP (ENSHBUG00000003792) BRWD1 (ENSHBUG00000003712) GET1 (ENSHBUG00000003533) ##22 ENSHBUG00000003507 SH3BGR (ENSHBUG00000003472) ENSHBUG00000003427 DSCAM (ENSHBUG00000003417) Haplochromini_A ANCESTRAL SPECIES 20 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174.e ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000156017.fb ENSGT00940000159847 ENSGT01030000236803 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 P. nyererei MODERN SPECIES 298 pglyrp5 (ENSPNYG00000011859) ENSPNYG00000011839 snrpd2 (ENSPNYG00000011826) ENSPNYG00000011815 ENSPNYG00000011797 cltcb (ENSPNYG00000011737) cfap45 (ENSPNYG00000011669) slc37a4a (ENSPNYG00000011642) trappc4 (ENSPNYG00000011626) rps25 (ENSPNYG00000011614) sgcg (ENSPNYG00000011599) SACS (ENSPNYG00000011559) TNFRSF19 (ENSPNYG00000011535) MIPEP (ENSPNYG00000011479) BRWD1 (ENSPNYG00000011393) GET1 (ENSPNYG00000011363) ##22 sh3bgr (ENSPNYG00000011342) ENSPNYG00000011328 DSCAM (ENSPNYG00000011266) bace2 (ENSPNYG00000011236) ATM (ENSPNYG00000011075) ENSPNYG00000011035 ENSPNYG00000011010 vmp1 (ENSPNYG00000010976) tubd1 (ENSPNYG00000010942) ENSPNYG00000010930 rps6kb1b (ENSPNYG00000010910) slc33a1 (ENSPNYG00000010862) gmps (ENSPNYG00000010788) ENSPNYG00000010752 kcnab1a (ENSPNYG00000010724) Haplochromini_B ANCESTRAL SPECIES 9 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174.e ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000156017.fb ENSGT01030000236803 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b Eastern happy MODERN SPECIES 5 pglyrp5 (ENSACLG00000001693) ENSACLG00000001738 snrpd2 (ENSACLG00000001746) VASP (ENSACLG00000001772) ENSACLG00000001786 cltcb (ENSACLG00000001802) cfap45 (ENSACLG00000001879) slc37a4a (ENSACLG00000001899) trappc4 (ENSACLG00000001923) rps25 (ENSACLG00000001937) sgcg (ENSACLG00000001962) SACS (ENSACLG00000001990) TNFRSF19 (ENSACLG00000002019) MIPEP (ENSACLG00000002037) BRWD1 (ENSACLG00000002135) GET1 (ENSACLG00000002274) ##22 ENSACLG00000002305 ENSACLG00000002318 ENSACLG00000002366 PCP4 (ENSACLG00000002377) DSCAM (ENSACLG00000002566) bace2 (ENSACLG00000002738) ENSACLG00000002745 ENSACLG00000002762 ENSACLG00000002780 ENSACLG00000002815 vmp1 (ENSACLG00000002866) tubd1 (ENSACLG00000002918) rps6kb1b (ENSACLG00000002988) slc33a1 (ENSACLG00000003045) gmps (ENSACLG00000003086) Lyretail cichlid MODERN SPECIES 357 pglyrp5 (ENSNBRG00000000748) ENSNBRG00000000800 snrpd2 (ENSNBRG00000000805) ENSNBRG00000000820 cltcb (ENSNBRG00000000842) cfap45 (ENSNBRG00000001005) slc37a4a (ENSNBRG00000001090) trappc4 (ENSNBRG00000001122) rps25 (ENSNBRG00000001154) sgcg (ENSNBRG00000001171) SACS (ENSNBRG00000001180) tnfrsf19 (ENSNBRG00000001209) MIPEP (ENSNBRG00000001216) ENSNBRG00000001310 ENSNBRG00000001325 GET1 (ENSNBRG00000001335) ##22 sh3bgr (ENSNBRG00000001356) ENSNBRG00000001365 DSCAM (ENSNBRG00000001377) bace2 (ENSNBRG00000001509) ENSNBRG00000001548 ENSNBRG00000001564 ENSNBRG00000001584 vmp1 (ENSNBRG00000001690) tubd1 (ENSNBRG00000001764) rps6kb1b (ENSNBRG00000001797) slc33a1 (ENSNBRG00000001875) gmps (ENSNBRG00000001913) ENSNBRG00000001977 kcnab1a (ENSNBRG00000002042) ssr3 (ENSNBRG00000002077) Nile tilapia MODERN SPECIES 5 polr2i (ENSONIG00000005397) pglyrp5 (ENSONIG00000028864) ENSONIG00000005405 snrpd2 (ENSONIG00000042301) VASP (ENSONIG00000005407) cltcb (ENSONIG00000005419) cfap45 (ENSONIG00000005430) slc37a4a (ENSONIG00000005432) trappc4 (ENSONIG00000005436) rps25 (ENSONIG00000005440) sgcg (ENSONIG00000005441) SACS (ENSONIG00000005444) tnfrsf19 (ENSONIG00000005447) MIPEP (ENSONIG00000005451) BRWD1 (ENSONIG00000005455) WRB (ENSONIG00000005465) ##22 sh3bgr (ENSONIG00000039028) ENSONIG00000032616 ENSONIG00000028558 DSCAM (ENSONIG00000005472) bace2 (ENSONIG00000005485) ATM (ENSONIG00000005496) ENSONIG00000005503 vmp1 (ENSONIG00000005506) tubd1 (ENSONIG00000005513) rps6kb1b (ENSONIG00000005515) slc33a1 (ENSONIG00000005517) gmps (ENSONIG00000005518) ENSONIG00000005521 KCNAB1 (ENSONIG00000005523) ssr3 (ENSONIG00000005536) Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000177608 ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT01030000235087 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a Eupercaria ANCESTRAL SPECIES 7 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT01030000235087 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a Tetraodontidae ANCESTRAL SPECIES 42 ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000159847 ENSGT01030000235087 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591.p ENSGT00940000160473 ENSGT00940000156760.e.b ENSGT00390000000970 Fugu MODERN SPECIES 2 ENSTRUG00000020999 polr2i (ENSTRUG00000022235) pglyrp5 (ENSTRUG00000021181) ENSTRUG00000023123 snrpd2 (ENSTRUG00000023014) ENSTRUG00000000275 cltcb (ENSTRUG00000000313) cfap45 (ENSTRUG00000000400) slc37a4a (ENSTRUG00000022477) trappc4 (ENSTRUG00000000505) rps25 (ENSTRUG00000000547) sgcg (ENSTRUG00000000565) SACS (ENSTRUG00000000662) tnfrsf19 (ENSTRUG00000000696) MIPEP (ENSTRUG00000000713) GET1 (ENSTRUG00000001308) ##22 sh3bgr (ENSTRUG00000001393) ENSTRUG00000001463 DSCAM (ENSTRUG00000001465) bace2 (ENSTRUG00000002469) TMPRSS2 (ENSTRUG00000002768) ATM (ENSTRUG00000030407) ENSTRUG00000023256 vmp1 (ENSTRUG00000005028) tubd1 (ENSTRUG00000005354) rps6kb1b (ENSTRUG00000005648) slc33a1 (ENSTRUG00000006020) gmps (ENSTRUG00000006141) ENSTRUG00000006589 KCNAB1 (ENSTRUG00000007233) ssr3 (ENSTRUG00000021463) Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT01030000235087 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT01030000235087 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a Perciformes ANCESTRAL SPECIES 10 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT01030000235087 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000154203 ENSGT00940000155062.b.d.a ENSGT00940000154019.a Perciformes_a ANCESTRAL SPECIES 9 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000156017.fb ENSGT00940000165615.b ENSGT01030000235087 ENSGT00940000159847 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000154203 ENSGT00940000155062.b.d.a Pike perch MODERN SPECIES 86 polr2i (ENSSLUG00000013267) pglyrp5 (ENSSLUG00000013271) ENSSLUG00000013276 snrpd2 (ENSSLUG00000013281) ENSSLUG00000013299 cltcb (ENSSLUG00000013439) cfap45 (ENSSLUG00000015289) slc37a4a (ENSSLUG00000015303) trappc4 (ENSSLUG00000015317) rps25 (ENSSLUG00000015373) sgcg (ENSSLUG00000015383) ENSSLUG00000015394 tnfrsf19 (ENSSLUG00000015420) MIPEP (ENSSLUG00000015474) BRWD1 (ENSSLUG00000015979) GET1 (ENSSLUG00000020040) ##22 ENSSLUG00000020046 SH3BGRL (ENSSLUG00000020052) ENSSLUG00000020060 ENSSLUG00000020063 DSCAM (ENSSLUG00000020065) bace2 (ENSSLUG00000020071) TMPRSS2 (ENSSLUG00000020078) ATM (ENSSLUG00000020095) ENSSLUG00000020122 vmp1 (ENSSLUG00000020129) tubd1 (ENSSLUG00000020130) RPS6KB1 (ENSSLUG00000020145) slc33a1 (ENSSLUG00000020198) gmps (ENSSLUG00000020209) ENSSLUG00000020247 Cottioidei ANCESTRAL SPECIES 4 ENSGT00940000160678.a ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00940000165905 ENSGT00940000159847 ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000156017.fb ENSGT00940000165615.b ENSGT01030000235087 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT01030000236977 ENSGT00670000098061 ENSGT00390000012388 ENSGT00940000172904 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000154203 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 Stickleback MODERN SPECIES polr2i (ENSGACG00000006679) ENSGACG00000006696 snrpd2 (ENSGACG00000006697) ENSGACG00000006702 cltcb (ENSGACG00000006708) cfap45 (ENSGACG00000006784) slc37a4a (ENSGACG00000006790) trappc4 (ENSGACG00000006808) rps25 (ENSGACG00000006818) sgcg (ENSGACG00000006839) SACS (ENSGACG00000006866) tnfrsf19 (ENSGACG00000006869) ENSGACG00000006872 MIPEP (ENSGACG00000006874) ENSGACG00000006887 GET1 (ENSGACG00000006890) ##22 SH3BGRL (ENSGACG00000006900) ENSGACG00000006903 ENSGACG00000006906 ENSGACG00000006908 ENSGACG00000006915 DSCAM (ENSGACG00000006917) bace2 (ENSGACG00000006936) ENSGACG00000006979 ATM (ENSGACG00000006981) ENSGACG00000006998 ENSGACG00000007005 ENSGACG00000007008 vmp1 (ENSGACG00000007009) tubd1 (ENSGACG00000007016) RPS6KB1 (ENSGACG00000007027) Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 Gilthead seabream MODERN SPECIES 11 ENSSAUG00010009036 snrpd2 (ENSSAUG00010009035) ENSSAUG00010009034 cltcb (ENSSAUG00010009002) cfap45 (ENSSAUG00010008997) slc37a4a (ENSSAUG00010008995) trappc4 (ENSSAUG00010008988) rps25 (ENSSAUG00010008984) sgcg (ENSSAUG00010008983) ENSSAUG00010008982 ENSSAUG00010008981 ENSSAUG00010008979 tnfrsf19 (ENSSAUG00010008977) MIPEP (ENSSAUG00010007830) BRWD1 (ENSSAUG00010005505) GET1 (ENSSAUG00010005439) ##22 ENSSAUG00010005437 sh3bgr (ENSSAUG00010005431) ENSSAUG00010005429 PCP4 (ENSSAUG00010005428) DSCAM (ENSSAUG00010004746) bace2 (ENSSAUG00010004045) ENSSAUG00010004041 ATM (ENSSAUG00010024686) ENSSAUG00010024677 vmp1 (ENSSAUG00010024671) tubd1 (ENSSAUG00010024666) rps6kb1b (ENSSAUG00010024586) slc33a1 (ENSSAUG00010024579) gmps (ENSSAUG00010024081) ENSSAUG00010024068 Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 European seabass MODERN SPECIES 3 ENSDLAG00005011258 ENSDLAG00005011268 ENSDLAG00005026611 ENSDLAG00005011366 ENSDLAG00005011371 ENSDLAG00005011388 ENSDLAG00005012049 slc37a4a (ENSDLAG00005026556) trappc4 (ENSDLAG00005034726) RPS25 (ENSDLAG00005012136) sgcg (ENSDLAG00005012152) SACS (ENSDLAG00005012160) TNFRSF19 (ENSDLAG00005012166) MIPEP (ENSDLAG00005012227) BRWD1 (ENSDLAG00005014292) GET1 (ENSDLAG00005028635) ##22 ENSDLAG00005033085 sh3bgr (ENSDLAG00005033194) ENSDLAG00005015529 PCP4 (ENSDLAG00005034194) ENSDLAG00005015557 bace2 (ENSDLAG00005015782) ENSDLAG00005015906 ENSDLAG00005015958 ENSDLAG00005034756 vmp1 (ENSDLAG00005000095) ENSDLAG00005000199 rps6kb1b (ENSDLAG00005000265) slc33a1 (ENSDLAG00005000369) gmps (ENSDLAG00005000390) ENSDLAG00005000541 Large yellow croaker MODERN SPECIES 479 pglyrp5 (ENSLCRG00005009913) ENSLCRG00005009911 snrpd2 (ENSLCRG00005009896) ENSLCRG00005009895 ENSLCRG00005009893 cltcb (ENSLCRG00005009451) cfap45 (ENSLCRG00005009427) slc37a4a (ENSLCRG00005009425) trappc4 (ENSLCRG00005009421) rps25 (ENSLCRG00005009418) sgcg (ENSLCRG00005009415) SACS (ENSLCRG00005009399) tnfrsf19 (ENSLCRG00005009394) MIPEP (ENSLCRG00005009341) ENSLCRG00005006800 GET1 (ENSLCRG00005006768) ##22 SH3BGRL (ENSLCRG00005006767) ENSLCRG00005006765 ENSLCRG00005006764 DSCAM (ENSLCRG00005004721) bace2 (ENSLCRG00005004486) ENSLCRG00005004478 ATM (ENSLCRG00005002491) ENSLCRG00005020210 vmp1 (ENSLCRG00005020202) tubd1 (ENSLCRG00005020200) rps6kb1b (ENSLCRG00005020043) slc33a1 (ENSLCRG00005020034) gmps (ENSLCRG00005019918) ENSLCRG00005019917 KCNAB1 (ENSLCRG00005019456) Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000177608 ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000159847 ENSGT00940000165615.b ENSGT01030000235087 ENSGT00940000165905 ENSGT00940000156017.fb ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a Carangaria ANCESTRAL SPECIES 8 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000177608 ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000159847 ENSGT00940000165615.b ENSGT01030000235087 ENSGT00940000165905 ENSGT00940000156017.fb ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a Carangaria_A ANCESTRAL SPECIES 10 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000156017.fb ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 Seriola ANCESTRAL SPECIES 107 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000156017.fb ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.e.b Greater amberjack MODERN SPECIES 263 tnfrsf19 (ENSSDUG00000011111) MIPEP (ENSSDUG00000011133) BRWD1 (ENSSDUG00000011194) ENSSDUG00000011259 GET1 (ENSSDUG00000011276) ##22 SH3BGRL (ENSSDUG00000011284) PCP4 (ENSSDUG00000011309) DSCAM (ENSSDUG00000011324) bace2 (ENSSDUG00000011375) ENSSDUG00000011401 ATM (ENSSDUG00000011432) ENSSDUG00000011642 vmp1 (ENSSDUG00000011759) tubd1 (ENSSDUG00000011791) rps6kb1b (ENSSDUG00000011826) slc33a1 (ENSSDUG00000011921) gmps (ENSSDUG00000011961) ENSSDUG00000012007 kcnab1a (ENSSDUG00000012041) ssr3 (ENSSDUG00000012065) Yellowtail amberjack MODERN SPECIES 2709 tnfrsf19 (ENSSLDG00000018296) MIPEP (ENSSLDG00000018219) ENSSLDG00000018147 ENSSLDG00000018131 GET1 (ENSSLDG00000018117) ##22 SH3BGRL (ENSSLDG00000018039) ENSSLDG00000017997 PCP4 (ENSSLDG00000017984) DSCAM (ENSSLDG00000017857) bace2 (ENSSLDG00000017766) ENSSLDG00000017743 ATM (ENSSLDG00000017590) ENSSLDG00000017562 ENSSLDG00000017549 vmp1 (ENSSLDG00000017538) tubd1 (ENSSLDG00000017471) rps6kb1b (ENSSLDG00000017438) slc33a1 (ENSSLDG00000017409) gmps (ENSSLDG00000017360) ENSSLDG00000017315 Barramundi perch MODERN SPECIES 311 MIPEP (ENSLCAG00010008971) BRWD1 (ENSLCAG00010008026) GET1 (ENSLCAG00010007806) ##22 sh3bgr (ENSLCAG00010007787) ENSLCAG00010007770 ENSLCAG00010007764 DSCAM (ENSLCAG00010007372) bace2 (ENSLCAG00010007279) TMPRSS2 (ENSLCAG00010007274) ENSLCAG00010007223 vmp1 (ENSLCAG00010007207) tubd1 (ENSLCAG00010007190) rps6kb1b (ENSLCAG00010006981) slc33a1 (ENSLCAG00010006951) gmps (ENSLCAG00010006816) ENSLCAG00010006770 ENSLCAG00010006762 KCNAB1 (ENSLCAG00010006738) Pleuronectoidei ANCESTRAL SPECIES 13 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000159847 ENSGT00940000165615.b ENSGT01030000235087 ENSGT00940000165905 ENSGT00940000156017.fb ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.i.b ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a Turbot MODERN SPECIES 15 ENSSMAG00000003414 snrpd2 (ENSSMAG00000003422) ENSSMAG00000003441 ENSSMAG00000003454 ENSSMAG00000003584 slc37a4a (ENSSMAG00000003612) trappc4 (ENSSMAG00000021819) RPS25 (ENSSMAG00000003657) sgcg (ENSSMAG00000003664) SACS (ENSSMAG00000003674) TNFRSF19 (ENSSMAG00000003699) ENSSMAG00000023732 ENSSMAG00000035276 MIPEP (ENSSMAG00000003706) BRWD1 (ENSSMAG00000033221) ENSSMAG00000003726 ##22 sh3bgr (ENSSMAG00000025337) ENSSMAG00000003771 ENSSMAG00000003801 ENSSMAG00000003813 bace2 (ENSSMAG00000003934) ENSSMAG00000003958 ENSSMAG00000003979 ENSSMAG00000004072 vmp1 (ENSSMAG00000004088) ENSSMAG00000004126 rps6kb1b (ENSSMAG00000004157) ENSSMAG00000004204 aamdc (ENSSMAG00000025950) ENSSMAG00000004233 KCTD14 (ENSSMAG00000034158) Anabantaria ANCESTRAL SPECIES 9 ENSGT00550000075063 ENSGT00940000161006 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000164489 ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f Zig-zag eel MODERN SPECIES 4 pglyrp5 (ENSMAMG00000013962) ENSMAMG00000013946 snrpd2 (ENSMAMG00000026288) ENSMAMG00000013883 ENSMAMG00000013799 ENSMAMG00000013725 slc37a4a (ENSMAMG00000013683) trappc4 (ENSMAMG00000013672) RPS25 (ENSMAMG00000013655) sgcg (ENSMAMG00000013624) SACS (ENSMAMG00000013583) ENSMAMG00000027045 TNFRSF19 (ENSMAMG00000013571) MIPEP (ENSMAMG00000013547) ENSMAMG00000013515 ENSMAMG00000013492 ##22 ENSMAMG00000026518 ENSMAMG00000013469 BACE1 (ENSMAMG00000013436) pcsk7 (ENSMAMG00000013424) tagln (ENSMAMG00000013401) ENSMAMG00000013392 cbln20 (ENSMAMG00000024574) ENSMAMG00000013361 ENSMAMG00000013343 ENSMAMG00000013313 ENSMAMG00000013296 ENSMAMG00000026409 ENSMAMG00000013166 ENSMAMG00000013187 ENSMAMG00000013139 Anabantoidei ANCESTRAL SPECIES 14 ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00670000098061 ENSGT00390000012388 ENSGT00390000007230.b ENSGT00940000157069 ENSGT00940000155062.b.d.a ENSGT00940000154019.a ENSGT00390000006591 ENSGT00940000160473 ENSGT00940000156760.f ENSGT00940000156760.e.b Siamese fighting fish MODERN SPECIES 4 ENSBSLG00000003819 polr2i (ENSBSLG00000003807) pglyrp5 (ENSBSLG00000003754) ENSBSLG00000003656 snrpd2 (ENSBSLG00000003632) ENSBSLG00000003018 cltcb (ENSBSLG00000002679) slc37a4a (ENSBSLG00000002519) trappc4 (ENSBSLG00000002446) rps25 (ENSBSLG00000002417) sgcg (ENSBSLG00000002399) SACS (ENSBSLG00000002286) tnfrsf19 (ENSBSLG00000002236) MIPEP (ENSBSLG00000025221) BRWD1 (ENSBSLG00000024719) GET1 (ENSBSLG00000024662) ##22 sh3bgr (ENSBSLG00000024644) PCP4 (ENSBSLG00000024632) DSCAM (ENSBSLG00000024564) bace2 (ENSBSLG00000024512) ATM (ENSBSLG00000024399) ENSBSLG00000024388 vmp1 (ENSBSLG00000024375) tubd1 (ENSBSLG00000024370) rps6kb1b (ENSBSLG00000023815) slc33a1 (ENSBSLG00000023790) gmps (ENSBSLG00000023613) KCNAB1 (ENSBSLG00000023499) ssr3 (ENSBSLG00000023464) TIPARP (ENSBSLG00000023451) ccnl1a (ENSBSLG00000023262) Climbing perch MODERN SPECIES 4 polr2i (ENSATEG00000000758) pglyrp5 (ENSATEG00000000796) ENSATEG00000000862 snrpd2 (ENSATEG00000000868) ENSATEG00000027800 ENSATEG00000001007 ENSATEG00000001151 slc37a4a (ENSATEG00000001221) trappc4 (ENSATEG00000001260) RPS25 (ENSATEG00000001289) sgcg (ENSATEG00000001297) SACS (ENSATEG00000001324) TNFRSF19 (ENSATEG00000001369) MIPEP (ENSATEG00000001402) BRWD1 (ENSATEG00000025243) ENSATEG00000001447 ##22 sh3bgr (ENSATEG00000027004) ENSATEG00000025365 PCP4 (ENSATEG00000030128) ENSATEG00000001528 bace2 (ENSATEG00000001688) ENSATEG00000001745 ENSATEG00000002259 vmp1 (ENSATEG00000002271) ENSATEG00000002282 rps6kb1b (ENSATEG00000002322) slc33a1 (ENSATEG00000002379) gmps (ENSATEG00000002414) ENSATEG00000002487 kcnab1a (ENSATEG00000002685) ssr3 (ENSATEG00000002923) Cod MODERN SPECIES 7 ENSGMOG00000000802 ENSGMOG00000018257 ENSGMOG00000031675 blmh (ENSGMOG00000018237) slc6a4a (ENSGMOG00000018214) SSH2 (ENSGMOG00000018094) ankrd13b (ENSGMOG00000018065) GIT1 (ENSGMOG00000017789) ENSGMOG00000032138 ENSGMOG00000013368 ENSGMOG00000011502 SACS (ENSGMOG00000008699) ENSGMOG00000008714 MIPEP (ENSGMOG00000008729) BRWD1 (ENSGMOG00000033322) ENSGMOG00000008777 ##22 sh3bgr (ENSGMOG00000008783) ENSGMOG00000008789 PCP4 (ENSGMOG00000026737) ENSGMOG00000033004 ENSGMOG00000036534 ENSGMOG00000008806 bace2 (ENSGMOG00000008848) ENSGMOG00000008875 ENSGMOG00000035807 vmp1 (ENSGMOG00000008975) ENSGMOG00000008987 rps6kb1b (ENSGMOG00000008995) slc33a1 (ENSGMOG00000009015) gmps (ENSGMOG00000009029) ENSGMOG00000009045 Otomorpha ANCESTRAL SPECIES 339 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00980000198612 ENSGT00940000165905 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000165615.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.j ENSGT00670000098061 Otophysi ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.b ##22 Cyprinoidei ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.b ##22 Cyprininae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.b ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.b ##22 Golden-line barbel MODERN SPECIES 13 ENSSGRG00000033121 serpini1 (ENSSGRG00000033122) pdcd10a (ENSSGRG00000033123) ENSSGRG00000033177 ENSSGRG00000033178 ENSSGRG00000033180 ENSSGRG00000033181 SLITRK3 (ENSSGRG00000033182) ENSSGRG00000033184 fam168a (ENSSGRG00000033187) P2RY6 (ENSSGRG00000033189) ARHGEF17 (ENSSGRG00000033190) relt (ENSSGRG00000033191) P2RY2 (ENSSGRG00000033192) FCHSD2 (ENSSGRG00000033194) ENSSGRG00000033239 ##22 KCTD14 (ENSSGRG00000033242) INTS4 (ENSSGRG00000033248) aamdc (ENSSGRG00000033646) ENSSGRG00000033652 RSF1 (ENSSGRG00000033656) clns1a (ENSSGRG00000033658) pak1 (ENSSGRG00000033667) ENSSGRG00000033982 ENSSGRG00000033983 myo7aa (ENSSGRG00000033989) dcun1d5 (ENSSGRG00000034629) LRCH3 (ENSSGRG00000034687) ENSSGRG00000034968 si:dkey-14d8.7 (ENSSGRG00000034969) UNC13C (ENSSGRG00000034987) Clupeiformes ANCESTRAL SPECIES 49 ENSGT00390000012948.a ENSGT00390000008756 ENSGT00940000164973 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000009423.b ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT01030000235087 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155207.a.b.j ENSGT00670000098061 ENSGT00940000155932.b.a ENSGT01090000260005.a.a.b.a.b.c ENSGT00940000167295.d ENSGT00450000040324.a.a.b ENSGT00950000182843.a.a.a.b.a.b ENSGT00940000155478.hb.a.a ENSGT00940000156844.a ENSGT00670000099420 Atlantic herring MODERN SPECIES 25 si:cabz01090165.1 (ENSCHAG00000021705) ENSCHAG00000021704 ENSCHAG00000021701 ENSCHAG00000021697 ENSCHAG00000021693 yif1b (ENSCHAG00000021618) slc37a4a (ENSCHAG00000021559) trappc4 (ENSCHAG00000021522) rps25 (ENSCHAG00000021501) sgcg (ENSCHAG00000021486) SACS (ENSCHAG00000021466) ENSCHAG00000021455 tnfrsf19 (ENSCHAG00000021449) MIPEP (ENSCHAG00000019957) BRWD1 (ENSCHAG00000018411) GET1 (ENSCHAG00000018363) ##22 ENSCHAG00000018323 sh3bgr (ENSCHAG00000018319) ENSCHAG00000018300 DSCAM (ENSCHAG00000016941) bace2 (ENSCHAG00000016882) TMPRSS2 (ENSCHAG00000016841) ENSCHAG00000016732 vezf1b (ENSCHAG00000016649) ENSCHAG00000016625 ENSCHAG00000016495 ENSCHAG00000016292 ENSCHAG00000016194 ENSCHAG00000016162 ENSCHAG00000016134 ENSCHAG00000016106 Sarcopterygii ANCESTRAL SPECIES 67 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000164201 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a Coelacanth MODERN SPECIES 1033 KCNJ15 (ENSLACG00000002317) ERG (ENSLACG00000003340) ETS2 (ENSLACG00000010068) PSMG1 (ENSLACG00000011558) BRWD1 (ENSLACG00000011920) GET1 (ENSLACG00000022345) ##22 LCA5L (ENSLACG00000013344) SH3BGR (ENSLACG00000013667) ENSLACG00000013973 Tetrapoda ANCESTRAL SPECIES 28 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Amniota ANCESTRAL SPECIES ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Sauria ANCESTRAL SPECIES 2 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.c ENSGT00940000164201 ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 Archelosauria ANCESTRAL SPECIES ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.c ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a Cryptodira ANCESTRAL SPECIES ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000185616 ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.c ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a Testudinoidea ANCESTRAL SPECIES 1 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000185616 ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.c.f ENSGT00940000155686.c.e ENSGT00940000155686.d.b ENSGT00940000155686.d.a ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b Emydidae ANCESTRAL SPECIES 28 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000185616 ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.c.e ENSGT00940000155686.d.b ENSGT00940000155686.d.a ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 11 ENSTMTG00000022128 ENSTMTG00000022125 ENSTMTG00000022119 ENSTMTG00000022111 ENSTMTG00000022101 ENSTMTG00000022098 ENSTMTG00000022091 ENSTMTG00000022082 ENSTMTG00000022077 ENSTMTG00000022076 ENSTMTG00000022073 ENSTMTG00000022067 ENSTMTG00000022062 ENSTMTG00000022059 ENSTMTG00000021797 ENSTMTG00000021738 ##22 ENSTMTG00000021734 ENSTMTG00000021729 ENSTMTG00000021726 ENSTMTG00000021646 ENSTMTG00000021626 ENSTMTG00000021619 ENSTMTG00000021585 ENSTMTG00000021576 ENSTMTG00000021573 ENSTMTG00000021559 ENSTMTG00000021556 ENSTMTG00000021549 ENSTMTG00000021533 ENSTMTG00000021482 ENSTMTG00000021448 Three-toed box turtle MODERN SPECIES 10 ENSTMTG00000016364 ENSTMTG00000016329 ENSTMTG00000016311 ENSTMTG00000016296 ENSTMTG00000016281 ENSTMTG00000016249 ENSTMTG00000016213 ENSTMTG00000016204 ENSTMTG00000016192 ENSTMTG00000015909 ENSTMTG00000015878 ENSTMTG00000015865 ENSTMTG00000015854 ENSTMTG00000015835 ENSTMTG00000015816 ENSTMTG00000015810 ##22 ENSTMTG00000015795 ENSTMTG00000015787 ENSTMTG00000015776 ENSTMTG00000015467 ENSTMTG00000015422 ENSTMTG00000015411 ENSTMTG00000015076 ENSTMTG00000015041 ENSTMTG00000015032 ENSTMTG00000014978 ENSTMTG00000014957 ENSTMTG00000014933 ENSTMTG00000014892 ENSTMTG00000014819 ENSTMTG00000014802 painted turtle MODERN SPECIES 2389 DYRK1A (ENSCPBG00000012395) KCNJ6 (ENSCPBG00000012397) KCNJ15 (ENSCPBG00000012399) ERG (ENSCPBG00000012403) ETS2 (ENSCPBG00000012415) PSMG1 (ENSCPBG00000012418) BRWD1 (ENSCPBG00000012420) ENSCPBG00000012425 GET1 (ENSCPBG00000012428) ##22 LCA5L (ENSCPBG00000012429) SH3BGR (ENSCPBG00000012430) B3GALT5 (ENSCPBG00000012433) IGSF5 (ENSCPBG00000012436) PCP4 (ENSCPBG00000012442) DSCAM (ENSCPBG00000012456) BACE2 (ENSCPBG00000012845) FAM3B (ENSCPBG00000012846) ENSCPBG00000012848 ENSCPBG00000012852 ENSCPBG00000012892 TMPRSS2 (ENSCPBG00000012905) RIPK4 (ENSCPBG00000012906) ENSCPBG00000012908 PRDM15 (ENSCPBG00000012917) Testudinidae ANCESTRAL SPECIES ENSGT00940000160495 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.c.f ENSGT00940000155686.c.e ENSGT00940000155686.d.b ENSGT00940000155686.d.a ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 Goode s thornscrub tortoise MODERN SPECIES CHAF1B (ENSGEVG00005003264) CLDN14 (ENSGEVG00005003252) SIM2 (ENSGEVG00005003239) HLCS (ENSGEVG00005003229) ENSGEVG00005003219 PIGP (ENSGEVG00005003209) TTC3 (ENSGEVG00005003139) VPS26C (ENSGEVG00005003088) DYRK1A (ENSGEVG00005003065) KCNJ6 (ENSGEVG00005003053) KCNJ15 (ENSGEVG00005003045) ERG (ENSGEVG00005002947) ETS2 (ENSGEVG00005002886) PSMG1 (ENSGEVG00005002870) BRWD1 (ENSGEVG00005002258) GET1 (ENSGEVG00005001943) ##22 LCA5L (ENSGEVG00005001928) SH3BGR (ENSGEVG00005001914) B3GALT5 (ENSGEVG00005001907) PCP4 (ENSGEVG00005001894) DSCAM (ENSGEVG00005001860) BACE2 (ENSGEVG00005001818) FAM3B (ENSGEVG00005001801) ENSGEVG00005001700 ENSGEVG00005001600 ENSGEVG00005001562 ENSGEVG00005001544 RIPK4 (ENSGEVG00005001522) ENSGEVG00005001504 PRDM15 (ENSGEVG00005001471) C2CD2 (ENSGEVG00005001430) Abingdon island giant tortoise MODERN SPECIES 1541 PSMG1 (ENSCABG00000020045) ENSCABG00000020044 BRWD1 (ENSCABG00000020030) ENSCABG00000020028 GET1 (ENSCABG00000020027) ##22 LCA5L (ENSCABG00000020026) SH3BGR (ENSCABG00000020023) B3GALT5 (ENSCABG00000020022) Chinese turtle MODERN SPECIES 174 KCNJ15 (ENSPSIG00000009303) ERG (ENSPSIG00000008476) ETS2 (ENSPSIG00000007985) PSMG1 (ENSPSIG00000007201) BRWD1 (ENSPSIG00000005903) ENSPSIG00000005890 GET1 (ENSPSIG00000005886) ##22 ENSPSIG00000015793 ENSPSIG00000001133 ENSPSIG00000015750 SH3BGR (ENSPSIG00000015636) ENSPSIG00000015622 Archosauria ANCESTRAL SPECIES 2 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686.c ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 Aves ANCESTRAL SPECIES ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Neognathae ANCESTRAL SPECIES 1 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Galloanserae ANCESTRAL SPECIES 1 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a Phasianidae ANCESTRAL SPECIES ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 Phasianidae_b ANCESTRAL SPECIES ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000164201 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 Chicken MODERN SPECIES CLDN14 (ENSGALG00010013096) SIM2 (ENSGALG00010013099) HLCS (ENSGALG00010013104) RIPPLY3 (ENSGALG00010013109) PIGP (ENSGALG00010013114) TTC3 (ENSGALG00010013135) DSCR3 (ENSGALG00010013168) DYRK1A (ENSGALG00010013181) KCNJ6 (ENSGALG00010013205) KCNJ15 (ENSGALG00010013304) ERG (ENSGALG00010013330) ETS2 (ENSGALG00010013349) PSMG1 (ENSGALG00010013375) BRWD1 (ENSGALG00010014738) HMGN1 (ENSGALG00010013391) WRB (ENSGALG00010013413) ##22 LCA5L (ENSGALG00010013449) SH3BGR (ENSGALG00010013457) B3GALT5 (ENSGALG00010013492) IGSF5 (ENSGALG00010013504) PCP4 (ENSGALG00010013549) DSCAM (ENSGALG00010013589) BACE2 (ENSGALG00010013650) FAM3B (ENSGALG00010013758) ENSGALG00010013778 MX1 (ENSGALG00010013809) TMPRSS2 (ENSGALG00010013833) RIPK4 (ENSGALG00010010941) PRDM15 (ENSGALG00010010948) C2CD2 (ENSGALG00010010991) ZBTB21 (ENSGALG00010010982) Turkey MODERN SPECIES CLDN14 (ENSMGAG00000014543) SIM2 (ENSMGAG00000014545) HLCS (ENSMGAG00000014546) RIPPLY3 (ENSMGAG00000019709) PIGP (ENSMGAG00000022533) ENSMGAG00000018948 ENSMGAG00000014549 VPS26C (ENSMGAG00000014550) DYRK1A (ENSMGAG00000014551) KCNJ6 (ENSMGAG00000014552) KCNJ15 (ENSMGAG00000016167) ERG (ENSMGAG00000014553) ETS2 (ENSMGAG00000014554) PSMG1 (ENSMGAG00000014555) BRWD1 (ENSMGAG00000014556) GET1 (ENSMGAG00000014558) ##22 LCA5L (ENSMGAG00000014559) SH3BGR (ENSMGAG00000014561) B3GALT5 (ENSMGAG00000022407) IGSF5 (ENSMGAG00000014560) DSCAM (ENSMGAG00000014563) ENSMGAG00000016169 ENSMGAG00000014569 ENSMGAG00000020084 ENSMGAG00000014568 ENSMGAG00000014566 ENSMGAG00000014565 ENSMGAG00000017801 ENSMGAG00000014567 ENSMGAG00000014572 ENSMGAG00000014564 Japanese quail MODERN SPECIES CLDN14 (ENSCJPG00005007818) SIM2 (ENSCJPG00005007820) HLCS (ENSCJPG00005007836) PIGP (ENSCJPG00005007837) TTC3 (ENSCJPG00005007838) VPS26C (ENSCJPG00005007843) DYRK1A (ENSCJPG00005007871) ENSCJPG00005007872 KCNJ6 (ENSCJPG00005007874) KCNJ15 (ENSCJPG00005007938) ERG (ENSCJPG00005007939) ETS2 (ENSCJPG00005007967) PSMG1 (ENSCJPG00005007970) BRWD1 (ENSCJPG00005007977) ENSCJPG00005008183 GET1 (ENSCJPG00005008185) ##22 LCA5L (ENSCJPG00005008251) SH3BGR (ENSCJPG00005008263) B3GALT5 (ENSCJPG00005008266) IGSF5 (ENSCJPG00005008268) PCP4 (ENSCJPG00005008270) DSCAM (ENSCJPG00005008335) ENSCJPG00005008648 BACE2 (ENSCJPG00005008649) FAM3B (ENSCJPG00005008650) MX2 (ENSCJPG00005008653) TMPRSS2 (ENSCJPG00005008655) RIPK4 (ENSCJPG00005008656) PRDM15 (ENSCJPG00005008658) C2CD2 (ENSCJPG00005008685) ZBTB21 (ENSCJPG00005008686) Anatidae ANCESTRAL SPECIES 6 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00940000164489 ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947.a ENSGT00530000064267.a ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a Pink-footed goose MODERN SPECIES 92 CHAF1B (ENSABRG00000007176) CLDN14 (ENSABRG00000007223) SIM2 (ENSABRG00000007227) HLCS (ENSABRG00000007232) PIGP (ENSABRG00000007271) VPS26C (ENSABRG00000007303) DYRK1A (ENSABRG00000007369) KCNJ6 (ENSABRG00000007507) ENSABRG00000007532 KCNJ15 (ENSABRG00000007567) ERG (ENSABRG00000007601) ETS2 (ENSABRG00000007653) PSMG1 (ENSABRG00000007673) BRWD1 (ENSABRG00000007702) ENSABRG00000007815 GET1 (ENSABRG00000007894) ##22 LCA5L (ENSABRG00000007911) SH3BGR (ENSABRG00000007927) B3GALT5 (ENSABRG00000007941) IGSF5 (ENSABRG00000007955) PCP4 (ENSABRG00000007977) DSCAM (ENSABRG00000008016) BACE2 (ENSABRG00000008215) FAM3B (ENSABRG00000008237) MX2 (ENSABRG00000008287) ENSABRG00000008382 TMPRSS2 (ENSABRG00000008407) RIPK4 (ENSABRG00000008447) ENSABRG00000008465 PRDM15 (ENSABRG00000008548) C2CD2 (ENSABRG00000008747) Duck MODERN SPECIES RIPPLY3 (ENSAPLG00000019819) PIGP (ENSAPLG00000022878) ENSAPLG00000019136 ENSAPLG00000028063 ENSAPLG00000012209 VPS26C (ENSAPLG00000011951) DYRK1A (ENSAPLG00000011621) ENSAPLG00000028827 ENSAPLG00000027981 ENSAPLG00000015271 ENSAPLG00000024773 ENSAPLG00000017761 ENSAPLG00000014951 ENSAPLG00000014570 ENSAPLG00000030604 GET1 (ENSAPLG00000023365) ##22 ENSAPLG00000021983 ENSAPLG00000018874 ENSAPLG00000019280 ENSAPLG00000014415 ENSAPLG00000030900 ENSAPLG00000022017 ENSAPLG00000028806 TMEM47 (ENSAPLG00000007982) ENSAPLG00000023391 ENSAPLG00000022874 ENSAPLG00000007792 LAMTOR2 (ENSAPLG00000001483) ENSAPLG00000016297 TAB3 (ENSAPLG00000002911) ENSAPLG00000003111 Neognathae_b ANCESTRAL SPECIES ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Passeriformes ANCESTRAL SPECIES 1 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 Great tit MODERN SPECIES CLDN14 (ENSPMJG00000009452) SIM2 (ENSPMJG00000009456) HLCS (ENSPMJG00000009520) ENSPMJG00000009522 PIGP (ENSPMJG00000009524) TTC3 (ENSPMJG00000009526) VPS26C (ENSPMJG00000009544) DYRK1A (ENSPMJG00000009547) KCNJ6 (ENSPMJG00000009621) KCNJ15 (ENSPMJG00000009690) ERG (ENSPMJG00000009699) ETS2 (ENSPMJG00000009822) PSMG1 (ENSPMJG00000009827) BRWD1 (ENSPMJG00000009831) ENSPMJG00000010236 GET1 (ENSPMJG00000010237) ##22 SH3BGR (ENSPMJG00000010241) B3GALT5 (ENSPMJG00000010307) IGSF5 (ENSPMJG00000010309) PCP4 (ENSPMJG00000010310) DSCAM (ENSPMJG00000010433) BACE2 (ENSPMJG00000010499) MX1 (ENSPMJG00000010501) TMPRSS2 (ENSPMJG00000010504) RIPK4 (ENSPMJG00000010510) PRDM15 (ENSPMJG00000010516) C2CD2 (ENSPMJG00000010580) ZBTB21 (ENSPMJG00000010582) ENSPMJG00000010583 ABCG1 (ENSPMJG00000010585) TFF2 (ENSPMJG00000010586) Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00940000160495 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 Flycatcher MODERN SPECIES SIM2 (ENSFALG00000005247) HLCS (ENSFALG00000005235) PIGP (ENSFALG00000005214) ENSFALG00000026035 ENSFALG00000023874 ENSFALG00000005183 VPS26C (ENSFALG00000005166) DYRK1A (ENSFALG00000024758) KCNJ6 (ENSFALG00000023707) KCNJ15 (ENSFALG00000025214) ERG (ENSFALG00000005094) ETS2 (ENSFALG00000026706) ENSFALG00000026279 PSMG1 (ENSFALG00000005056) BRWD1 (ENSFALG00000005039) GET1 (ENSFALG00000028042) ##22 ENSFALG00000005019 SH3BGR (ENSFALG00000005014) B3GALT5 (ENSFALG00000005008) IGSF5 (ENSFALG00000005004) PCP4 (ENSFALG00000025034) DSCAM (ENSFALG00000004983) BACE2 (ENSFALG00000029036) FAM3B (ENSFALG00000002111) MX1 (ENSFALG00000002094) TMPRSS2 (ENSFALG00000002079) RIPK4 (ENSFALG00000002070) PRDM15 (ENSFALG00000002064) ENSFALG00000002057 ZBTB21 (ENSFALG00000002056) ENSFALG00000028853 Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960.e ENSGT00390000002960.f ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 Passeroidea ANCESTRAL SPECIES 10 ENSGT00940000160495 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960.e ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 Common canary MODERN SPECIES 11 ENSSCAG00000010856 ENSSCAG00000010846 ENSSCAG00000010840 PIGP (ENSSCAG00000010835) ENSSCAG00000010829 ENSSCAG00000010806 VPS26C (ENSSCAG00000010780) DYRK1A (ENSSCAG00000010775) KCNJ6 (ENSSCAG00000010773) KCNJ15 (ENSSCAG00000010771) ERG (ENSSCAG00000010759) ETS2 (ENSSCAG00000010751) PSMG1 (ENSSCAG00000010748) ENSSCAG00000010735 ENSSCAG00000010730 GET1 (ENSSCAG00000010727) ##22 ENSSCAG00000010724 SH3BGR (ENSSCAG00000010721) B3GALT5 (ENSSCAG00000010720) ENSSCAG00000010716 ENSSCAG00000010713 ENSSCAG00000010696 SIM2 (ENSSCAG00000010649) CLDN14 (ENSSCAG00000010639) CHAF1B (ENSSCAG00000010633) MORC3 (ENSSCAG00000010568) DOP1B (ENSSCAG00000010522) ENSSCAG00000010509 ENSSCAG00000010506 ENSSCAG00000010502 Zebra finch MODERN SPECIES CHAF1B (ENSTGUG00000004832) CLDN14 (ENSTGUG00000004853) SIM2 (ENSTGUG00000004856) HLCS (ENSTGUG00000005220) PIGP (ENSTGUG00000025829) TTC3 (ENSTGUG00000004895) VPS26C (ENSTGUG00000027285) DYRK1A (ENSTGUG00000004960) KCNJ6 (ENSTGUG00000004993) KCNJ15 (ENSTGUG00000004997) ERG (ENSTGUG00000004998) ETS2 (ENSTGUG00000005028) PSMG1 (ENSTGUG00000005059) BRWD1 (ENSTGUG00000005062) HMGN1 (ENSTGUG00000005112) GET1 (ENSTGUG00000005116) ##22 SH3BGR (ENSTGUG00000005133) ENSTGUG00000005124 B3GALT5 (ENSTGUG00000005144) ENSTGUG00000021600 PCP4 (ENSTGUG00000005150) BACE2 (ENSTGUG00000005268) FAM3B (ENSTGUG00000005255) MX1 (ENSTGUG00000005326) TMPRSS2 (ENSTGUG00000005348) RIPK4 (ENSTGUG00000005420) PRDM15 (ENSTGUG00000005437) C2CD2 (ENSTGUG00000005496) ZBTB21 (ENSTGUG00000005526) UMODL1 (ENSTGUG00000005528) ABCG1 (ENSTGUG00000005541) Medium ground finch MODERN SPECIES 270 KCNJ15 (ENSGFOG00000013963) ENSGFOG00000013964 ERG (ENSGFOG00000013965) ETS2 (ENSGFOG00000013968) PSMG1 (ENSGFOG00000013970) ENSGFOG00000013974 ENSGFOG00000013978 ENSGFOG00000006602 GET1 (ENSGFOG00000006644) ##22 SH3BGR (ENSGFOG00000006653) Neognathae_c ANCESTRAL SPECIES 4 ENSGT00940000160495 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Golden eagle MODERN SPECIES 23 CHAF1B (ENSACCG00020006425) CLDN14 (ENSACCG00020006442) SIM2 (ENSACCG00020006453) HLCS (ENSACCG00020006470) PIGP (ENSACCG00020006482) TTC3 (ENSACCG00020006500) VPS26C (ENSACCG00020006549) DYRK1A (ENSACCG00020006581) KCNJ6 (ENSACCG00020006608) KCNJ15 (ENSACCG00020006619) ERG (ENSACCG00020006656) ETS2 (ENSACCG00020006692) PSMG1 (ENSACCG00020006704) BRWD1 (ENSACCG00020006729) ENSACCG00020006775 GET1 (ENSACCG00020006786) ##22 LCA5L (ENSACCG00020006800) SH3BGR (ENSACCG00020006813) B3GALT5 (ENSACCG00020006827) IGSF5 (ENSACCG00020006845) PCP4 (ENSACCG00020006869) DSCAM (ENSACCG00020007031) BACE2 (ENSACCG00020007183) FAM3B (ENSACCG00020007233) MX1 (ENSACCG00020007248) TMPRSS2 (ENSACCG00020007290) RIPK4 (ENSACCG00020007325) ENSACCG00020007388 PRDM15 (ENSACCG00020007436) C2CD2 (ENSACCG00020007512) ZBTB21 (ENSACCG00020007548) African ostrich MODERN SPECIES 769 DYRK1A (ENSSCUG00000011910) KCNJ6 (ENSSCUG00000011913) KCNJ15 (ENSSCUG00000011919) ERG (ENSSCUG00000011922) ETS2 (ENSSCUG00000011923) PSMG1 (ENSSCUG00000011926) ENSSCUG00000011927 ENSSCUG00000011932 GET1 (ENSSCUG00000011935) ##22 LCA5L (ENSSCUG00000011937) SH3BGR (ENSSCUG00000011939) B3GALT5 (ENSSCUG00000011940) ENSSCUG00000011943 PCP4 (ENSSCUG00000011946) DSCAM (ENSSCUG00000011964) BACE2 (ENSSCUG00000012025) FAM3B (ENSSCUG00000012033) MX1 (ENSSCUG00000012037) TMPRSS2 (ENSSCUG00000012041) RIPK4 (ENSSCUG00000012044) ENSSCUG00000012048 PRDM15 (ENSSCUG00000012056) C2CD2 (ENSSCUG00000012063) ZBTB21 (ENSSCUG00000012066) Lepidosauria ANCESTRAL SPECIES 4 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.c ENSGT00940000164201 ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Episquamata ANCESTRAL SPECIES 2 ENSGT00390000016421.b.a ENSGT00940000160495 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964.c ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.c ENSGT00940000164201 ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Toxicofera ANCESTRAL SPECIES 9 ENSGT00940000160495 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964.c ENSGT00940000160964.d ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.c ENSGT00940000164201 ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 Elapidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.b ##22 Elapidae_a ANCESTRAL SPECIES 12 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408.e ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.D ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b Blue-lipped sea krait MODERN SPECIES 569 BRWD1 (ENSLLTG00000008918) ENSLLTG00000009005 GET1 (ENSLLTG00000009032) ##22 LCA5L (ENSLLTG00000009053) Indian cobra MODERN SPECIES 4 SIM2 (ENSNNAG00000004801) HLCS (ENSNNAG00000004191) ENSNNAG00000004128 PIGP (ENSNNAG00000004114) ENSNNAG00000015490 VPS26C (ENSNNAG00000015478) DYRK1A (ENSNNAG00000015401) KCNJ6 (ENSNNAG00000015386) KCNJ15 (ENSNNAG00000015348) ERG (ENSNNAG00000015103) ETS2 (ENSNNAG00000015067) ENSNNAG00000015057 ENSNNAG00000015024 ENSNNAG00000015010 ENSNNAG00000014992 GET1 (ENSNNAG00000014983) ##22 LCA5L (ENSNNAG00000014964) SH3BGR (ENSNNAG00000014946) ENSNNAG00000014931 ENSNNAG00000014920 PCP4 (ENSNNAG00000014905) DSCAM (ENSNNAG00000014616) BACE2 (ENSNNAG00000014576) FAM3B (ENSNNAG00000014550) ENSNNAG00000014530 ENSNNAG00000014519 TMPRSS2 (ENSNNAG00000014479) RIPK4 (ENSNNAG00000014451) PRDM15 (ENSNNAG00000014280) C2CD2 (ENSNNAG00000014209) ZBTB21 (ENSNNAG00000014183) Lizard MODERN SPECIES 2 HLCS (ENSACAG00000008830) PIGP (ENSACAG00000008861) ENSACAG00000027720 ENSACAG00000035690 VPS26C (ENSACAG00000009090) ENSACAG00000039859 DYRK1A (ENSACAG00000009116) KCNJ6 (ENSACAG00000009168) ENSACAG00000041054 KCNJ15 (ENSACAG00000036984) ERG (ENSACAG00000009199) ETS2 (ENSACAG00000009269) ENSACAG00000045094 ENSACAG00000041068 BRWD1 (ENSACAG00000005460) GET1 (ENSACAG00000005451) ##22 LCA5L (ENSACAG00000005442) SH3BGR (ENSACAG00000005419) ENSACAG00000037146 ENSACAG00000005416 ENSACAG00000037008 ENSACAG00000005415 ENSACAG00000028616 ENSACAG00000036222 ENSACAG00000042918 DSCAM (ENSACAG00000005358) ENSACAG00000041995 ENSACAG00000045102 BACE2 (ENSACAG00000005800) FAM3B (ENSACAG00000001496) ENSACAG00000023592 Laterata ANCESTRAL SPECIES ENSGT00390000016421.b.a ENSGT00940000160495 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964.c ENSGT00940000163947 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.c ENSGT00940000155686.d ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Common wall lizard MODERN SPECIES 12 CHAF1B (ENSPMRG00000020932) CLDN14 (ENSPMRG00000020960) SIM2 (ENSPMRG00000020967) HLCS (ENSPMRG00000020975) ENSPMRG00000020980 PIGP (ENSPMRG00000020985) ENSPMRG00000021012 VPS26C (ENSPMRG00000021026) ENSPMRG00000021032 DYRK1A (ENSPMRG00000021041) KCNJ6 (ENSPMRG00000021055) KCNJ15 (ENSPMRG00000021059) ERG (ENSPMRG00000021074) ETS2 (ENSPMRG00000021097) BRWD1 (ENSPMRG00000021108) GET1 (ENSPMRG00000021140) ##22 LCA5L (ENSPMRG00000021152) SH3BGR (ENSPMRG00000021165) B3GALT5 (ENSPMRG00000021171) ENSPMRG00000021172 ENSPMRG00000021180 PCP4 (ENSPMRG00000021191) DSCAM (ENSPMRG00000021325) BACE2 (ENSPMRG00000021807) FAM3B (ENSPMRG00000021816) MX1 (ENSPMRG00000021831) TMPRSS2 (ENSPMRG00000021850) ENSPMRG00000021866 ENSPMRG00000021882 PRDM15 (ENSPMRG00000021892) C2CD2 (ENSPMRG00000021944) tuatara MODERN SPECIES 736 PSMG1 (ENSSPUG00000011702) ENSSPUG00000011694 ENSSPUG00000011681 ENSSPUG00000011670 ENSSPUG00000011656 ENSSPUG00000011647 ENSSPUG00000011645 ENSSPUG00000011632 ENSSPUG00000011624 GET1 (ENSSPUG00000011614) ##22 SH3BGR (ENSSPUG00000011594) PCP4 (ENSSPUG00000011551) DSCAM (ENSSPUG00000011507) Mammalia ANCESTRAL SPECIES ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.D ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Platypus MODERN SPECIES 9 PTPRF (ENSOANG00000006400) HYI (ENSOANG00000006406) ENSOANG00000041345 ENSOANG00000006407 ENSOANG00000040733 ENSOANG00000006408 VPS26C (ENSOANG00000036069) DYRK1A (ENSOANG00000006412) KCNJ6 (ENSOANG00000006415) KCNJ15 (ENSOANG00000006416) ERG (ENSOANG00000006418) ETS2 (ENSOANG00000006420) PSMG1 (ENSOANG00000006421) BRWD1 (ENSOANG00000006422) ENSOANG00000040624 GET1 (ENSOANG00000049347) ##22 SH3BGR (ENSOANG00000040703) ENSOANG00000006428 ENSOANG00000006429 PCP4 (ENSOANG00000035160) DSCAM (ENSOANG00000006430) ENSOANG00000006433 ENSOANG00000006437 TMPRSS2 (ENSOANG00000006438) RIPK4 (ENSOANG00000006443) ENSOANG00000006444 PRDM15 (ENSOANG00000006445) ENSOANG00000006446 ZBTB21 (ENSOANG00000019605) ABCG1 (ENSOANG00000006449) ENSOANG00000006450 Theria ANCESTRAL SPECIES 1 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.D ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 Marsupialia ANCESTRAL SPECIES 23 ENSGT00390000001844.a.a ENSGT00390000002429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00940000156253 ENSGT00940000158923 ENSGT00950000183107.a.b.a ENSGT00950000182802.D ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000154829 ENSGT00940000157962 Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a.a ENSGT00500000044950 ENSGT00940000156253 ENSGT00940000158923 ENSGT00950000183107.a.b.a ENSGT00950000182802.D ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000154829 ENSGT00940000157962 Diprotodontia ANCESTRAL SPECIES 32 ENSGT00940000159505 ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a.a ENSGT00500000044950 ENSGT00940000156253 ENSGT00940000158923 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000154829 ENSGT00940000157962 Diprotodontia_a ANCESTRAL SPECIES 31 ENSGT00940000159505 ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159.a ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826.bc ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a.a ENSGT00500000044950 ENSGT00940000156253 ENSGT00940000158923 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964.i ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00870000136508.c.b ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000154829 ENSGT00940000157962 Common wonbat MODERN SPECIES 1120 ENSVURG00010023267 SIK1 (ENSVURG00010023263) ENSVURG00010023260 HSF2BP (ENSVURG00010023259) RRP1B (ENSVURG00010023255) ENSVURG00010023251 PDXK (ENSVURG00010023250) ENSVURG00010023249 ENSVURG00010023247 ENSVURG00010023246 PSMG1 (ENSVURG00010023242) GRIK1 (ENSVURG00010022936) BACH1 (ENSVURG00010022808) ENSVURG00010022806 BRWD1 (ENSVURG00010020972) GET1 (ENSVURG00010020815) ##22 LCA5L (ENSVURG00010020810) SH3BGR (ENSVURG00010020806) ENSVURG00010020804 ENSVURG00010020802 PCP4 (ENSVURG00010020798) DSCAM (ENSVURG00010020750) ENSVURG00010020735 BACE2 (ENSVURG00010020728) FAM3B (ENSVURG00010020723) TMPRSS2 (ENSVURG00010020641) RIPK4 (ENSVURG00010020636) PRDM15 (ENSVURG00010020621) C2CD2 (ENSVURG00010020605) ZBTB21 (ENSVURG00010020588) ENSVURG00010020582 Tasmanian devil MODERN SPECIES 2 CBS (ENSSHAG00000017100) U2AF1 (ENSSHAG00000017185) CRYAA (ENSSHAG00000017366) SIK1 (ENSSHAG00000017494) HSF2BP (ENSSHAG00000017635) RRP1B (ENSSHAG00000017789) PDXK (ENSSHAG00000017888) CSTB (ENSSHAG00000025634) ENSSHAG00000010304 ENSSHAG00000008796 ENSSHAG00000008206 ENSSHAG00000006972 ENSSHAG00000006419 ENSSHAG00000002554 ENSSHAG00000032232 GET1 (ENSSHAG00000024410) ##22 LCA5L (ENSSHAG00000002464) SH3BGR (ENSSHAG00000004155) B3GALT5 (ENSSHAG00000026882) PCP4 (ENSSHAG00000010796) DSCAM (ENSSHAG00000009089) BACE2 (ENSSHAG00000005092) TMPRSS2 (ENSSHAG00000004952) ENSSHAG00000001558 ENSSHAG00000002844 ENSSHAG00000023375 ENSSHAG00000005309 USP25 (ENSSHAG00000006133) ENSSHAG00000028405 NRIP1 (ENSSHAG00000022736) SAMSN1 (ENSSHAG00000003039) Eutheria ANCESTRAL SPECIES 5 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Atlantogenata ANCESTRAL SPECIES 110 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b Afrotheria ANCESTRAL SPECIES 144 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b Afrotheria_a ANCESTRAL SPECIES 147 ENSGT00940000160495 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b Hyrax MODERN SPECIES 6121 GET1 (ENSPCAG00000000007) ##22 Elephant MODERN SPECIES 513 MORC3 (ENSLAFG00000000689) CHAF1B (ENSLAFG00000000692) CLDN14 (ENSLAFG00000000859) SIM2 (ENSLAFG00000000122) HLCS (ENSLAFG00000000126) PIGP (ENSLAFG00000004145) ENSLAFG00000004146 VPS26C (ENSLAFG00000000818) DYRK1A (ENSLAFG00000000815) KCNJ6 (ENSLAFG00000007238) KCNJ15 (ENSLAFG00000013702) ERG (ENSLAFG00000005455) ETS2 (ENSLAFG00000004469) PSMG1 (ENSLAFG00000015096) BRWD1 (ENSLAFG00000015097) GET1 (ENSLAFG00000008072) ##22 LCA5L (ENSLAFG00000012558) ENSLAFG00000027123 ENSLAFG00000005853 ENSLAFG00000026827 ENSLAFG00000005039 PCP4 (ENSLAFG00000017850) DSCAM (ENSLAFG00000005372) BACE2 (ENSLAFG00000027997) FAM3B (ENSLAFG00000005755) ENSLAFG00000016541 ENSLAFG00000029694 MX2 (ENSLAFG00000009018) TMPRSS2 (ENSLAFG00000027954) RIPK4 (ENSLAFG00000008863) PRDM15 (ENSLAFG00000008866) Xenarthra ANCESTRAL SPECIES 513 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a Armadillo MODERN SPECIES 289 PSMG1 (ENSDNOG00000014014) BRWD1 (ENSDNOG00000014021) GET1 (ENSDNOG00000039289) ##22 ENSDNOG00000049110 SH3BGR (ENSDNOG00000046236) ENSDNOG00000045009 ENSDNOG00000031964 ENSDNOG00000035961 B3GALT5 (ENSDNOG00000033456) ENSDNOG00000004197 PCP4 (ENSDNOG00000036624) DSCAM (ENSDNOG00000002369) Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000011549 ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000011549 ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Primates ANCESTRAL SPECIES 1 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.a.a ENSGT00390000011549 ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.a.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Lemuriformes ANCESTRAL SPECIES 9 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.a.a.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Mouse lemur MODERN SPECIES 24 HLCS (ENSMICG00000013188) RIPPLY3 (ENSMICG00000031167) ENSMICG00000027574 TTC3 (ENSMICG00000006423) VPS26C (ENSMICG00000006453) ENSMICG00000038207 DYRK1A (ENSMICG00000010871) KCNJ6 (ENSMICG00000010904) KCNJ15 (ENSMICG00000045136) ERG (ENSMICG00000003196) ETS2 (ENSMICG00000026895) ENSMICG00000027563 PSMG1 (ENSMICG00000000385) BRWD1 (ENSMICG00000013213) ENSMICG00000038583 GET1 (ENSMICG00000015808) ##22 ENSMICG00000046495 ENSMICG00000015813 SH3BGR (ENSMICG00000007755) B3GALT5 (ENSMICG00000045304) ENSMICG00000028713 PCP4 (ENSMICG00000015516) DSCAM (ENSMICG00000042048) RIPK4 (ENSMICG00000038490) PRDM15 (ENSMICG00000013783) C2CD2 (ENSMICG00000013844) ZBTB21 (ENSMICG00000042192) UMODL1 (ENSMICG00000016376) ABCG1 (ENSMICG00000015133) TFF3 (ENSMICG00000015162) TMPRSS2 (ENSMICG00000017325) Lemuriformes_a ANCESTRAL SPECIES 60 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.a.a.a.b.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Coquerels sifaka MODERN SPECIES 186 ENSPCOG00000023020 RIPPLY3 (ENSPCOG00000018211) ENSPCOG00000015022 TTC3 (ENSPCOG00000006603) ENSPCOG00000026647 VPS26C (ENSPCOG00000027513) DYRK1A (ENSPCOG00000019153) KCNJ6 (ENSPCOG00000025899) KCNJ15 (ENSPCOG00000026074) ERG (ENSPCOG00000018128) ETS2 (ENSPCOG00000003472) PSMG1 (ENSPCOG00000015910) ENSPCOG00000009124 ENSPCOG00000018754 ENSPCOG00000017286 GET1 (ENSPCOG00000014862) ##22 ENSPCOG00000026254 SH3BGR (ENSPCOG00000018334) B3GALT5 (ENSPCOG00000017471) ENSPCOG00000013389 PCP4 (ENSPCOG00000022744) DSCAM (ENSPCOG00000017132) ENSPCOG00000023190 BACE2 (ENSPCOG00000022910) FAM3B (ENSPCOG00000022148) MX2 (ENSPCOG00000025353) MX1 (ENSPCOG00000027202) TMPRSS2 (ENSPCOG00000020814) RIPK4 (ENSPCOG00000001750) PRDM15 (ENSPCOG00000017473) C2CD2 (ENSPCOG00000026979) Greater bamboo lemur MODERN SPECIES 664 ETS2 (ENSPSMG00000022910) ENSPSMG00000022915 PSMG1 (ENSPSMG00000022930) BRWD1 (ENSPSMG00000023022) ENSPSMG00000023069 GET1 (ENSPSMG00000023096) ##22 ENSPSMG00000023100 ENSPSMG00000023105 SH3BGR (ENSPSMG00000023123) ENSPSMG00000023127 B3GALT5 (ENSPSMG00000023128) ENSPSMG00000023138 PCP4 (ENSPSMG00000023144) DSCAM (ENSPSMG00000023178) BACE2 (ENSPSMG00000023186) FAM3B (ENSPSMG00000023193) MX2 (ENSPSMG00000023200) MX1 (ENSPSMG00000023244) TMPRSS2 (ENSPSMG00000023280) RIPK4 (ENSPSMG00000023294) COMMD6 (ENSPSMG00000023298) Bushbaby MODERN SPECIES 295 CLDN14 (ENSOGAG00000026091) SIM2 (ENSOGAG00000028990) HLCS (ENSOGAG00000002192) RIPPLY3 (ENSOGAG00000006538) PIGP (ENSOGAG00000011097) TTC3 (ENSOGAG00000005512) VPS26C (ENSOGAG00000005526) DYRK1A (ENSOGAG00000011236) KCNJ6 (ENSOGAG00000015429) KCNJ15 (ENSOGAG00000007599) ERG (ENSOGAG00000000044) ETS2 (ENSOGAG00000006580) PSMG1 (ENSOGAG00000032487) BRWD1 (ENSOGAG00000009562) ENSOGAG00000010329 GET1 (ENSOGAG00000026761) ##22 ENSOGAG00000030055 LCA5L (ENSOGAG00000001718) ENSOGAG00000031213 ENSOGAG00000024805 SH3BGR (ENSOGAG00000001720) B3GALT5 (ENSOGAG00000008383) ENSOGAG00000008386 Haplorrhini ANCESTRAL SPECIES 22 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.a.a ENSGT00390000011549 ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Tarsier MODERN SPECIES 5989 ENSTSYG00000013830 GET1 (ENSTSYG00000036330) ##22 ENSTSYG00000008435 ENSTSYG00000000160 SH3BGR (ENSTSYG00000026522) ENSTSYG00000033955 Simiiformes ANCESTRAL SPECIES 1 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.a.a.e.a.a.a ENSGT00390000011549 ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Platyrrhini ANCESTRAL SPECIES 31 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b.g.a ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00940000169148 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Cebidae ANCESTRAL SPECIES 32 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b.g.a ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00940000169148 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a.h Cebidae_a ANCESTRAL SPECIES 29 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b.g.a ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00940000169148 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a.h ENSGT00940000161028 ENSGT00940000159975 Bolivian squirrel monkey MODERN SPECIES 66 HLCS (ENSSBOG00000030015) PIGP (ENSSBOG00000029088) TTC3 (ENSSBOG00000023926) ENSSBOG00000004124 DYRK1A (ENSSBOG00000031681) KCNJ6 (ENSSBOG00000027870) ENSSBOG00000019510 ENSSBOG00000019633 KCNJ15 (ENSSBOG00000016506) ERG (ENSSBOG00000026628) ETS2 (ENSSBOG00000033069) PSMG1 (ENSSBOG00000027602) ENSSBOG00000019150 BRWD1 (ENSSBOG00000030561) ENSSBOG00000032422 GET1 (ENSSBOG00000020756) ##22 LCA5L (ENSSBOG00000028818) SH3BGR (ENSSBOG00000035842) IGSF5 (ENSSBOG00000021300) ENSSBOG00000016785 DSCAM (ENSSBOG00000032237) BACE2 (ENSSBOG00000025958) FAM3B (ENSSBOG00000035878) MX2 (ENSSBOG00000029626) TMPRSS2 (ENSSBOG00000020098) RIPK4 (ENSSBOG00000029180) PRDM15 (ENSSBOG00000013278) C2CD2 (ENSSBOG00000031814) UMODL1 (ENSSBOG00000035786) ABCG1 (ENSSBOG00000021366) TFF3 (ENSSBOG00000024872) Capuchin MODERN SPECIES 41 PIGP (ENSCCAG00000036761) ENSCCAG00000038088 ENSCCAG00000033805 ENSCCAG00000030643 ENSCCAG00000034512 ENSCCAG00000014797 DYRK1A (ENSCCAG00000024141) KCNJ6 (ENSCCAG00000023161) ENSCCAG00000030555 KCNJ15 (ENSCCAG00000004572) ERG (ENSCCAG00000028041) ETS2 (ENSCCAG00000032051) PSMG1 (ENSCCAG00000036563) BRWD1 (ENSCCAG00000032750) ENSCCAG00000032877 GET1 (ENSCCAG00000026562) ##22 LCA5L (ENSCCAG00000021449) SH3BGR (ENSCCAG00000036879) IGSF5 (ENSCCAG00000034768) PCP4 (ENSCCAG00000031003) Mas night monkey MODERN SPECIES 1376 ENSANAG00000033496 ENSANAG00000024896 ENSANAG00000021305 VPS26C (ENSANAG00000033846) ENSANAG00000022579 DYRK1A (ENSANAG00000025205) KCNJ6 (ENSANAG00000037322) ENSANAG00000016826 KCNJ15 (ENSANAG00000019657) ERG (ENSANAG00000027714) ENSANAG00000019801 ETS2 (ENSANAG00000035263) PSMG1 (ENSANAG00000029982) BRWD1 (ENSANAG00000027426) ENSANAG00000037575 GET1 (ENSANAG00000014374) ##22 LCA5L (ENSANAG00000036638) SH3BGR (ENSANAG00000033495) IGSF5 (ENSANAG00000023294) PCP4 (ENSANAG00000022174) DSCAM (ENSANAG00000029585) ENSANAG00000034923 BACE2 (ENSANAG00000020891) FAM3B (ENSANAG00000019755) MX2 (ENSANAG00000030389) MX1 (ENSANAG00000032841) TMPRSS2 (ENSANAG00000031604) RIPK4 (ENSANAG00000030821) PRDM15 (ENSANAG00000023230) C2CD2 (ENSANAG00000021285) ZBTB21 (ENSANAG00000020407) Catarrhini ANCESTRAL SPECIES 25 ENSGT00940000154465.C.o ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.a.e.a.a.a ENSGT00390000011549 ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Cercopithecidae ANCESTRAL SPECIES 28 ENSGT00730000111429 ENSGT00390000013771.u ENSGT00940000154465.C.o ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Cercopithecinae ANCESTRAL SPECIES 23 ENSGT00730000111429 ENSGT00390000013771.u ENSGT00940000154465.C.o ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Cercopithecinae_a ANCESTRAL SPECIES 22 ENSGT00390000013771.u ENSGT00940000154465.C.o ENSGT00910000147749 ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Macaca ANCESTRAL SPECIES 3 ENSGT00390000013771.u ENSGT00940000154465.C.o ENSGT00910000147749 ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Pig-tailed macaque MODERN SPECIES 503 PIGP (ENSMNEG00000029111) TTC3 (ENSMNEG00000017406) ENSMNEG00000028032 VPS26C (ENSMNEG00000019931) DYRK1A (ENSMNEG00000027229) KCNJ6 (ENSMNEG00000036804) ENSMNEG00000010394 ENSMNEG00000033234 ENSMNEG00000043068 KCNJ15 (ENSMNEG00000012650) ERG (ENSMNEG00000028447) ETS2 (ENSMNEG00000029078) PSMG1 (ENSMNEG00000028968) BRWD1 (ENSMNEG00000037268) ENSMNEG00000043143 GET1 (ENSMNEG00000036276) ##22 LCA5L (ENSMNEG00000034779) SH3BGR (ENSMNEG00000044767) B3GALT5 (ENSMNEG00000028563) IGSF5 (ENSMNEG00000036150) PCP4 (ENSMNEG00000043382) DSCAM (ENSMNEG00000045567) BACE2 (ENSMNEG00000039867) FAM3B (ENSMNEG00000036712) MX2 (ENSMNEG00000038461) MX1 (ENSMNEG00000032698) TMPRSS2 (ENSMNEG00000029183) RIPK4 (ENSMNEG00000024370) PRDM15 (ENSMNEG00000041997) C2CD2 (ENSMNEG00000043656) ZBTB21 (ENSMNEG00000028147) Cercopithecinae_b ANCESTRAL SPECIES 29 ENSGT00390000013771.u ENSGT00940000154465.C.o ENSGT00910000147749 ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Cercopithecinae_d ANCESTRAL SPECIES 36 ENSGT00390000013771.u ENSGT00940000154465.C.o ENSGT00910000147749 ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Drill MODERN SPECIES 887 KCNJ6 (ENSMLEG00000005853) ENSMLEG00000041245 ENSMLEG00000011472 ENSMLEG00000020165 KCNJ15 (ENSMLEG00000027520) ERG (ENSMLEG00000033749) ETS2 (ENSMLEG00000024380) PSMG1 (ENSMLEG00000043473) BRWD1 (ENSMLEG00000043257) ENSMLEG00000031999 GET1 (ENSMLEG00000038301) ##22 LCA5L (ENSMLEG00000020734) SH3BGR (ENSMLEG00000031375) B3GALT5 (ENSMLEG00000030055) IGSF5 (ENSMLEG00000006808) PCP4 (ENSMLEG00000031531) DSCAM (ENSMLEG00000028425) BACE2 (ENSMLEG00000044038) FAM3B (ENSMLEG00000033110) MX2 (ENSMLEG00000037071) MX1 (ENSMLEG00000032199) TMPRSS2 (ENSMLEG00000029709) Sooty mangabey MODERN SPECIES 465 RIPPLY3 (ENSCATG00000045245) PIGP (ENSCATG00000038403) TTC3 (ENSCATG00000041926) VPS26C (ENSCATG00000019393) DYRK1A (ENSCATG00000044358) KCNJ6 (ENSCATG00000037213) ENSCATG00000044805 ENSCATG00000044826 ENSCATG00000019078 KCNJ15 (ENSCATG00000021817) ERG (ENSCATG00000045169) ETS2 (ENSCATG00000032809) PSMG1 (ENSCATG00000042084) BRWD1 (ENSCATG00000007352) ENSCATG00000043642 GET1 (ENSCATG00000041953) ##22 LCA5L (ENSCATG00000012924) SH3BGR (ENSCATG00000040538) B3GALT5 (ENSCATG00000039495) IGSF5 (ENSCATG00000041067) PCP4 (ENSCATG00000043532) DSCAM (ENSCATG00000016259) BACE2 (ENSCATG00000042433) ENSCATG00000032305 FAM3B (ENSCATG00000039352) MX2 (ENSCATG00000035920) MX1 (ENSCATG00000036673) TMPRSS2 (ENSCATG00000035193) RIPK4 (ENSCATG00000044519) PRDM15 (ENSCATG00000034002) C2CD2 (ENSCATG00000041335) Vervet Monkey MODERN SPECIES 11 CLDN14 (ENSCSAG00000018711) SIM2 (ENSCSAG00000008567) HLCS (ENSCSAG00000008541) PIGP (ENSCSAG00000008532) ENSCSAG00000008520 VPS26C (ENSCSAG00000008515) DYRK1A (ENSCSAG00000008483) ENSCSAG00000018712 KCNJ6 (ENSCSAG00000008472) KCNJ15 (ENSCSAG00000018713) ERG (ENSCSAG00000008463) ETS2 (ENSCSAG00000008454) PSMG1 (ENSCSAG00000008450) BRWD1 (ENSCSAG00000008437) HMGN1 (ENSCSAG00000008397) GET1 (ENSCSAG00000008355) ##22 LCA5L (ENSCSAG00000008329) SH3BGR (ENSCSAG00000008320) B3GALT5 (ENSCSAG00000018714) IGSF5 (ENSCSAG00000008315) PCP4 (ENSCSAG00000008304) DSCAM (ENSCSAG00000008297) ENSCSAG00000008272 ENSCSAG00000000280 BACE2 (ENSCSAG00000008267) FAM3B (ENSCSAG00000008260) MX2 (ENSCSAG00000008253) MX1 (ENSCSAG00000008237) TMPRSS2 (ENSCSAG00000008229) RIPK4 (ENSCSAG00000008221) PRDM15 (ENSCSAG00000008213) Rhinopithecus ANCESTRAL SPECIES 353 ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 Black snub-nosed monkey MODERN SPECIES 658 DYNLRB2 (ENSRBIG00000028645) ENSRBIG00000042276 ENSRBIG00000040958 ENSRBIG00000033348 KCNJ15 (ENSRBIG00000024702) ERG (ENSRBIG00000042898) ETS2 (ENSRBIG00000033816) PSMG1 (ENSRBIG00000038977) BRWD1 (ENSRBIG00000028196) ENSRBIG00000031903 GET1 (ENSRBIG00000030445) ##22 LCA5L (ENSRBIG00000036213) SH3BGR (ENSRBIG00000035022) B3GALT5 (ENSRBIG00000017353) IGSF5 (ENSRBIG00000036727) PCP4 (ENSRBIG00000027088) Golden snub-nosed monkey MODERN SPECIES 1413 ENSRROG00000027534 ENSRROG00000031314 ENSRROG00000041277 KCNJ15 (ENSRROG00000005056) ERG (ENSRROG00000036615) ETS2 (ENSRROG00000039824) PSMG1 (ENSRROG00000037672) BRWD1 (ENSRROG00000030474) ENSRROG00000030755 GET1 (ENSRROG00000038743) ##22 LCA5L (ENSRROG00000043686) SH3BGR (ENSRROG00000037605) B3GALT5 (ENSRROG00000029179) IGSF5 (ENSRROG00000044392) PCP4 (ENSRROG00000041931) Hominoidea ANCESTRAL SPECIES 26 ENSGT00910000148153 ENSGT00950000183064.b.f ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.a.e.a.a.a ENSGT00390000011549 ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Gibbon MODERN SPECIES 17 ENSNLEG00000004521 PIGP (ENSNLEG00000004523) TTC3 (ENSNLEG00000004545) ENSNLEG00000032242 ENSNLEG00000004717 DYRK1A (ENSNLEG00000004733) KCNJ6 (ENSNLEG00000004741) ENSNLEG00000030342 ENSNLEG00000031686 KCNJ15 (ENSNLEG00000033586) ERG (ENSNLEG00000004758) ETS2 (ENSNLEG00000004804) PSMG1 (ENSNLEG00000028150) BRWD1 (ENSNLEG00000013134) ENSNLEG00000028365 GET1 (ENSNLEG00000033928) ##22 LCA5L (ENSNLEG00000013153) ENSNLEG00000013169 B3GALT5 (ENSNLEG00000013171) IGSF5 (ENSNLEG00000013181) PCP4 (ENSNLEG00000013201) ENSNLEG00000032106 DSCAM (ENSNLEG00000028860) ENSNLEG00000008585 FAM3B (ENSNLEG00000008601) MX2 (ENSNLEG00000008625) MX1 (ENSNLEG00000008634) TMPRSS2 (ENSNLEG00000008677) RIPK4 (ENSNLEG00000008693) PRDM15 (ENSNLEG00000014454) C2CD2 (ENSNLEG00000033883) Hominidae ANCESTRAL SPECIES 25 ENSGT00940000154465.C.o ENSGT00950000183064.b.e ENSGT00910000148153 ENSGT00950000183064.b.f ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Orangutan MODERN SPECIES 12 SIM2 (ENSPPYG00000011405) HLCS (ENSPPYG00000011406) RIPPLY3 (ENSPPYG00000040629) PIGP (ENSPPYG00000011409) TTC3 (ENSPPYG00000011410) VPS26C (ENSPPYG00000040834) DYRK1A (ENSPPYG00000011412) KCNJ6 (ENSPPYG00000011556) ENSPPYG00000011415 KCNJ15 (ENSPPYG00000031631) ERG (ENSPPYG00000011419) ETS2 (ENSPPYG00000011421) PSMG1 (ENSPPYG00000011423) BRWD1 (ENSPPYG00000011424) ENSPPYG00000011426 GET1 (ENSPPYG00000011427) ##22 LCA5L (ENSPPYG00000032149) ENSPPYG00000011428 B3GALT5 (ENSPPYG00000011429) IGSF5 (ENSPPYG00000011430) DSCAM (ENSPPYG00000011432) BACE2 (ENSPPYG00000011433) FAM3B (ENSPPYG00000011435) MX2 (ENSPPYG00000011436) MX1 (ENSPPYG00000011437) TMPRSS2 (ENSPPYG00000011438) RIPK4 (ENSPPYG00000011440) PRDM15 (ENSPPYG00000011441) C2CD2 (ENSPPYG00000011442) ZBTB21 (ENSPPYG00000011443) UMODL1 (ENSPPYG00000011445) Homo/Pan/Gorilla group ANCESTRAL SPECIES 27 ENSGT00940000154465.C.o ENSGT00950000183064.b.e ENSGT00910000148153 ENSGT00950000183064.b.f ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Gorilla DUPLICATION Gorilla MODERN SPECIES 3 GNS (ENSGGOG00000015351) ENSGGOG00000015349 TBK1 (ENSGGOG00000006786) XPOT (ENSGGOG00000006089) C12orf56 (ENSGGOG00000016282) ENSGGOG00000039980 KICS2 (ENSGGOG00000016604) SRGAP1 (ENSGGOG00000000078) ENSGGOG00000041637 RXYLT1 (ENSGGOG00000000706) AVPR1A (ENSGGOG00000037345) ENSGGOG00000022562 PPM1H (ENSGGOG00000003829) MON2 (ENSGGOG00000012086) USP15 (ENSGGOG00000002771) ENSGGOG00000041474 ##22 TAFA2 (ENSGGOG00000004620) SLC16A7 (ENSGGOG00000024992) ENSGGOG00000042922 LRIG3 (ENSGGOG00000016188) ATP23 (ENSGGOG00000010708) CTDSP2 (ENSGGOG00000023706) AVIL (ENSGGOG00000001418) TSFM (ENSGGOG00000001415) EEF1AKMT3 (ENSGGOG00000001413) METTL1 (ENSGGOG00000001411) CYP27B1 (ENSGGOG00000001409) MARCHF9 (ENSGGOG00000001407) CDK4 (ENSGGOG00000001404) TSPAN31 (ENSGGOG00000022283) AGAP2 (ENSGGOG00000001399) Gorilla MODERN SPECIES 12 RIPPLY3 (ENSGGOG00000038116) PIGP (ENSGGOG00000010275) TTC3 (ENSGGOG00000011116) ENSGGOG00000001581 ENSGGOG00000011897 KCNJ6 (ENSGGOG00000003812) ENSGGOG00000023530 ENSGGOG00000024462 ENSGGOG00000036523 KCNJ15 (ENSGGOG00000038780) ERG (ENSGGOG00000011391) ETS2 (ENSGGOG00000015464) PSMG1 (ENSGGOG00000005681) BRWD1 (ENSGGOG00000002545) ENSGGOG00000013672 GET1 (ENSGGOG00000013144) ##22 LCA5L (ENSGGOG00000013149) ENSGGOG00000005007 B3GALT5 (ENSGGOG00000004209) IGSF5 (ENSGGOG00000000146) PCP4 (ENSGGOG00000008772) DSCAM (ENSGGOG00000014691) BACE2 (ENSGGOG00000023241) FAM3B (ENSGGOG00000015137) MX2 (ENSGGOG00000001554) MX1 (ENSGGOG00000001560) TMPRSS2 (ENSGGOG00000004836) RIPK4 (ENSGGOG00000015422) PRDM15 (ENSGGOG00000011345) C2CD2 (ENSGGOG00000013707) UMODL1 (ENSGGOG00000008453) Homo/Pan group ANCESTRAL SPECIES 26 ENSGT00940000154465.C.o ENSGT00950000183064.b.e ENSGT00910000148153 ENSGT00950000183064.b.f ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Human MODERN SPECIES 13 CLDN14 (ENSG00000159261) SIM2 (ENSG00000159263) HLCS (ENSG00000159267) RIPPLY3 (ENSG00000183145) PIGP (ENSG00000185808) TTC3 (ENSG00000182670) VPS26C (ENSG00000157538) DYRK1A (ENSG00000157540) KCNJ6 (ENSG00000157542) KCNJ15 (ENSG00000157551) ERG (ENSG00000157554) ETS2 (ENSG00000157557) PSMG1 (ENSG00000183527) BRWD1 (ENSG00000185658) HMGN1 (ENSG00000205581) GET1 (ENSG00000182093) ##22 GET1-SH3BGR (ENSG00000285815) LCA5L (ENSG00000157578) SH3BGR (ENSG00000185437) B3GALT5 (ENSG00000183778) IGSF5 (ENSG00000183067) PCP4 (ENSG00000183036) DSCAM (ENSG00000171587) BACE2 (ENSG00000182240) FAM3B (ENSG00000183844) MX2 (ENSG00000183486) MX1 (ENSG00000157601) TMPRSS2 (ENSG00000184012) RIPK4 (ENSG00000183421) PRDM15 (ENSG00000141956) C2CD2 (ENSG00000157617) Pan ANCESTRAL SPECIES 27 ENSGT00390000013771.u ENSGT00940000154465.C.o ENSGT00910000148153 ENSGT00950000183064.b.f ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00390000011636 ENSGT00390000000582 ENSGT00910000147022 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a.ub ENSGT00950000182802.A.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163947 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 3 TBK1 (ENSPTRG00000005174) XPOT (ENSPTRG00000005173) C12H12orf56 (ENSPTRG00000005172) ENSPTRG00000050395 KICS2 (ENSPTRG00000005171) SRGAP1 (ENSPTRG00000005170) ENSPTRG00000047501 RXYLT1 (ENSPTRG00000005169) DPY19L2 (ENSPTRG00000005168) ENSPTRG00000051663 AVPR1A (ENSPTRG00000005167) ENSPTRG00000049319 PPM1H (ENSPTRG00000005165) MON2 (ENSPTRG00000005164) USP15 (ENSPTRG00000005163) ENSPTRG00000048315 ##22 TAFA2 (ENSPTRG00000005162) ENSPTRG00000038999 SLC16A7 (ENSPTRG00000005160) ENSPTRG00000044366 LRIG3 (ENSPTRG00000005159) ATP23 (ENSPTRG00000005156) CTDSP2 (ENSPTRG00000005155) AVIL (ENSPTRG00000005153) TSFM (ENSPTRG00000005152) EEF1AKMT3 (ENSPTRG00000005151) METTL1 (ENSPTRG00000005150) CYP27B1 (ENSPTRG00000005149) MARCHF9 (ENSPTRG00000005148) CDK4 (ENSPTRG00000005147) TSPAN31 (ENSPTRG00000005146) Chimpanzee MODERN SPECIES 12 PIGP (ENSPTRG00000013897) TTC3 (ENSPTRG00000013898) ENSPTRG00000048727 VPS26C (ENSPTRG00000013900) DYRK1A (ENSPTRG00000013901) KCNJ6 (ENSPTRG00000004469) ENSPTRG00000013903 ENSPTRG00000013904 ENSPTRG00000052552 KCNJ15 (ENSPTRG00000043267) ERG (ENSPTRG00000013907) ETS2 (ENSPTRG00000013908) PSMG1 (ENSPTRG00000013911) BRWD1 (ENSPTRG00000013912) ENSPTRG00000031426 GET1 (ENSPTRG00000013915) ##22 LCA5L (ENSPTRG00000013916) SH3BGR (ENSPTRG00000013917) B3GALT5 (ENSPTRG00000052056) IGSF5 (ENSPTRG00000013920) PCP4 (ENSPTRG00000013921) DSCAM (ENSPTRG00000013922) BACE2 (ENSPTRG00000013924) FAM3B (ENSPTRG00000013925) MX1 (ENSPTRG00000013927) TMPRSS2 (ENSPTRG00000013928) RIPK4 (ENSPTRG00000013929) PRDM15 (ENSPTRG00000013930) C2CD2 (ENSPTRG00000013932) ZBTB21 (ENSPTRG00000050158) UMODL1 (ENSPTRG00000013936) Bonobo DUPLICATION Bonobo MODERN SPECIES 3 GNS (ENSPPAG00000033583) ENSPPAG00000036360 TBK1 (ENSPPAG00000015357) XPOT (ENSPPAG00000031361) C12orf56 (ENSPPAG00000036309) ENSPPAG00000039771 KICS2 (ENSPPAG00000011830) SRGAP1 (ENSPPAG00000042858) ENSPPAG00000036729 RXYLT1 (ENSPPAG00000037019) AVPR1A (ENSPPAG00000026488) ENSPPAG00000038218 PPM1H (ENSPPAG00000038554) MON2 (ENSPPAG00000036500) USP15 (ENSPPAG00000001187) ENSPPAG00000031469 ##22 TAFA2 (ENSPPAG00000030151) SLC16A7 (ENSPPAG00000035323) ENSPPAG00000031170 LRIG3 (ENSPPAG00000041349) ATP23 (ENSPPAG00000035425) CTDSP2 (ENSPPAG00000013270) AVIL (ENSPPAG00000043314) TSFM (ENSPPAG00000043428) EEF1AKMT3 (ENSPPAG00000025733) METTL1 (ENSPPAG00000042594) CYP27B1 (ENSPPAG00000031025) ENSPPAG00000033727 CDK4 (ENSPPAG00000036900) TSPAN31 (ENSPPAG00000024342) AGAP2 (ENSPPAG00000034874) Bonobo MODERN SPECIES 12 PIGP (ENSPPAG00000034406) TTC3 (ENSPPAG00000006846) ENSPPAG00000032499 ENSPPAG00000029622 DYRK1A (ENSPPAG00000032422) KCNJ6 (ENSPPAG00000032498) ENSPPAG00000036930 ENSPPAG00000037211 ENSPPAG00000033288 KCNJ15 (ENSPPAG00000032085) ERG (ENSPPAG00000030567) ETS2 (ENSPPAG00000027688) PSMG1 (ENSPPAG00000028596) BRWD1 (ENSPPAG00000029543) ENSPPAG00000032181 GET1 (ENSPPAG00000034665) ##22 LCA5L (ENSPPAG00000036290) ENSPPAG00000037065 B3GALT5 (ENSPPAG00000039797) PCP4 (ENSPPAG00000041210) DSCAM (ENSPPAG00000017108) BACE2 (ENSPPAG00000028296) FAM3B (ENSPPAG00000030408) MX2 (ENSPPAG00000032451) MX1 (ENSPPAG00000034486) ENSPPAG00000000669 TMPRSS2 (ENSPPAG00000018889) RIPK4 (ENSPPAG00000027031) ENSPPAG00000030922 C2CD2 (ENSPPAG00000004421) ZBTB21 (ENSPPAG00000005987) Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Glires ANCESTRAL SPECIES 2 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 Lagomorpha ANCESTRAL SPECIES ENSGT00390000008610.a.b.a.a.b ##22 Pika MODERN SPECIES 7481 GET1 (ENSOPRG00000006119) ##22 Rodentia ANCESTRAL SPECIES 2 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 Rodentia_B ANCESTRAL SPECIES 2 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 Kangaroo rat MODERN SPECIES 422 Ets2 (ENSDORG00000006046) Psmg1 (ENSDORG00000024369) ENSDORG00000028290 ENSDORG00000023919 Hmgn1 (ENSDORG00000024516) ENSDORG00000023446 ##22 Lca5l (ENSDORG00000016061) ENSDORG00000010100 B3galt5 (ENSDORG00000027270) Igsf5 (ENSDORG00000005042) ENSDORG00000007355 ENSDORG00000025922 Dscam (ENSDORG00000002348) ENSDORG00000030205 Bace2 (ENSDORG00000010948) ENSDORG00000027605 Fam3b (ENSDORG00000011095) ENSDORG00000003337 Tmprss2 (ENSDORG00000003340) Ripk4 (ENSDORG00000008414) Prdm15 (ENSDORG00000009748) Myomorpha ANCESTRAL SPECIES 14 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT01090000259987.a.a.a.d ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Muroidea ANCESTRAL SPECIES 11 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT01090000259987.a.a.a.d ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Muroidea_A ANCESTRAL SPECIES 17 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT01090000259987.a.a.a.d ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155686.j ENSGT00950000183004.a.b.a.b ENSGT00940000155686.i ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Cricetidae ANCESTRAL SPECIES 16 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT01090000259987.a.a.a.d ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155686.j ENSGT00950000183004.a.b.a.b ENSGT00940000155686.i ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Cricetidae_B ANCESTRAL SPECIES 13 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT01090000259987.a.a.a.d ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155686.j ENSGT00950000183004.a.b.a.b ENSGT00940000155686.i ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Northern American deer mouse MODERN SPECIES 3 Sim2 (ENSPEMG00000012087) Hlcs (ENSPEMG00000013311) Ripply3 (ENSPEMG00000013694) Pigp (ENSPEMG00000014214) Ttc3 (ENSPEMG00000024827) Vps26c (ENSPEMG00000016213) Dyrk1a (ENSPEMG00000017620) Kcnj6 (ENSPEMG00000000223) Kcnj15 (ENSPEMG00000001507) Erg (ENSPEMG00000008582) Ets2 (ENSPEMG00000012273) ENSPEMG00000031015 Psmg1 (ENSPEMG00000010416) Brwd1 (ENSPEMG00000014898) ENSPEMG00000020156 ENSPEMG00000027492 ##22 Lca5l (ENSPEMG00000020214) ENSPEMG00000003252 B3galt5 (ENSPEMG00000006922) Igsf5 (ENSPEMG00000007617) Itgb2l (ENSPEMG00000009654) ENSPEMG00000029164 Dscam (ENSPEMG00000013979) Bace2 (ENSPEMG00000015582) ENSPEMG00000015989 Fam3b (ENSPEMG00000017357) ENSPEMG00000014739 ENSPEMG00000027181 ENSPEMG00000024660 ENSPEMG00000027256 Tmprss2 (ENSPEMG00000007177) Prairie vole MODERN SPECIES 7 ENSMOCG00000005338 Ripply3 (ENSMOCG00000018664) Pigp (ENSMOCG00000018412) Ttc3 (ENSMOCG00000016472) Vps26c (ENSMOCG00000001783) Dyrk1a (ENSMOCG00000021125) Kcnj6 (ENSMOCG00000021427) Kcnj15 (ENSMOCG00000022139) Erg (ENSMOCG00000016605) Ets2 (ENSMOCG00000011500) Psmg1 (ENSMOCG00000019906) ENSMOCG00000017915 ENSMOCG00000005141 ENSMOCG00000016951 ENSMOCG00000018055 ENSMOCG00000016062 ##22 Lca5l (ENSMOCG00000008785) ENSMOCG00000000644 ENSMOCG00000012887 Or4c117 (ENSMOCG00000022094) ENSMOCG00000007303 Or4a2 (ENSMOCG00000009982) Or4a68 (ENSMOCG00000003063) Or4a72 (ENSMOCG00000003943) Parp9 (ENSMOCG00000015450) Kpna1 (ENSMOCG00000006140) Golgb1 (ENSMOCG00000009516) Iqcb1 (ENSMOCG00000018317) Eaf2 (ENSMOCG00000015355) ENSMOCG00000010965 Ildr1 (ENSMOCG00000020672) Cricetinae ANCESTRAL SPECIES 10 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155686.j ENSGT00950000183004.a.b.a.b ENSGT00940000155686.i ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Golden Hamster MODERN SPECIES 659 Sim2 (ENSMAUG00000012299) Hlcs (ENSMAUG00000000186) Ripply3 (ENSMAUG00000017474) Pigp (ENSMAUG00000010045) ENSMAUG00000008161 ENSMAUG00000007378 Dyrk1a (ENSMAUG00000018415) Kcnj6 (ENSMAUG00000011546) Kcnj15 (ENSMAUG00000009656) Erg (ENSMAUG00000012151) Ets2 (ENSMAUG00000012072) Psmg1 (ENSMAUG00000014265) ENSMAUG00000004019 ENSMAUG00000005957 Hmgn1 (ENSMAUG00000009433) ENSMAUG00000008620 ##22 Lca5l (ENSMAUG00000001467) ENSMAUG00000001722 Igsf5 (ENSMAUG00000018757) ENSMAUG00000001783 Dscam (ENSMAUG00000002565) Bace2 (ENSMAUG00000018970) Mx1 (ENSMAUG00000000088) Fam3b (ENSMAUG00000018355) Mx2 (ENSMAUG00000016913) Tmprss2 (ENSMAUG00000018948) Ripk4 (ENSMAUG00000017222) Prdm15 (ENSMAUG00000013730) C2cd2 (ENSMAUG00000013544) ENSMAUG00000011188 ENSMAUG00000014891 Chinese hamster chok1gshd MODERN SPECIES 382 Cldn14 (ENSCGRG00001011829) Sim2 (ENSCGRG00001015882) Hlcs (ENSCGRG00001019608) Ripply3 (ENSCGRG00001015129) ENSCGRG00001016611 Ttc3 (ENSCGRG00001022857) Vps26c (ENSCGRG00001014527) Dyrk1a (ENSCGRG00001000504) Kcnj6 (ENSCGRG00001008563) Kcnj15 (ENSCGRG00001014785) Erg (ENSCGRG00001005751) Ets2 (ENSCGRG00001019241) Psmg1 (ENSCGRG00001023463) Brwd1 (ENSCGRG00001019901) Hmgn1 (ENSCGRG00001006425) ENSCGRG00001015026 ##22 ENSCGRG00001008454 Lca5l (ENSCGRG00001001508) ENSCGRG00001018634 B3galt5 (ENSCGRG00001003465) Igsf5 (ENSCGRG00001017358) ENSCGRG00001011223 Dscam (ENSCGRG00001020907) Bace2 (ENSCGRG00001006826) Mx1 (ENSCGRG00001009938) Fam3b (ENSCGRG00001021679) Mx2 (ENSCGRG00001004304) Tmprss2 (ENSCGRG00001008718) ENSCGRG00001011892 Ripk4 (ENSCGRG00001021625) Prdm15 (ENSCGRG00001012883) Murinae ANCESTRAL SPECIES 13 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT01090000259987.a.a.a.d ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155686.j ENSGT00950000183004.a.b.a.b ENSGT00940000155686.i ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Mus ANCESTRAL SPECIES 13 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT01090000259987.a.a.a.d ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155686.j ENSGT00950000183004.a.b.a.b ENSGT00940000155686.i ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Mus_A ANCESTRAL SPECIES 18 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.u.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT01090000259987.a.a.a.d ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155686.j ENSGT00950000183004.a.b.a.b ENSGT00940000155686.i ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Mus_B ANCESTRAL SPECIES 18 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.u.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT01090000259987.a.a.a.d ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155686.j ENSGT00950000183004.a.b.a.b ENSGT00940000155686.i ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Mus_C ANCESTRAL SPECIES 12 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.u.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT01090000259987.a.a.a.d ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155686.j ENSGT00950000183004.a.b.a.b ENSGT00940000155686.i ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Steppe mouse MODERN SPECIES 3075 Erg (ENSMSIG00000015868) Ets2 (ENSMSIG00000015834) Psmg1 (ENSMSIG00000015643) Brwd1 (ENSMSIG00000015168) ENSMSIG00000015102 ENSMSIG00000015019 ##22 Lca5l (ENSMSIG00000014966) Sh3bgr (ENSMSIG00000014902) B3galt5 (ENSMSIG00000014879) Igsf5 (ENSMSIG00000014791) Itgb2l (ENSMSIG00000014689) ENSMSIG00000014678 Dscam (ENSMSIG00000014580) spretus MODERN SPECIES 7 Chaf1b (MGP_SPRETEiJ_G0021890) Cldn14 (MGP_SPRETEiJ_G0021891) Sim2 (MGP_SPRETEiJ_G0021892) Hlcs (MGP_SPRETEiJ_G0021893) Ripply3 (MGP_SPRETEiJ_G0021894) MGP_SPRETEiJ_G0021895 Ttc3 (MGP_SPRETEiJ_G0021896) Vps26c (MGP_SPRETEiJ_G0021897) Dyrk1a (MGP_SPRETEiJ_G0021898) Kcnj6 (MGP_SPRETEiJ_G0021899) Kcnj15 (MGP_SPRETEiJ_G0021900) Erg (MGP_SPRETEiJ_G0021901) Ets2 (MGP_SPRETEiJ_G0021902) Psmg1 (MGP_SPRETEiJ_G0021903) Hmgn1 (MGP_SPRETEiJ_G0021905) MGP_SPRETEiJ_G0021906 ##22 Lca5l (MGP_SPRETEiJ_G0021907) MGP_SPRETEiJ_G0021908 B3galt5 (MGP_SPRETEiJ_G0021909) Igsf5 (MGP_SPRETEiJ_G0021910) Itgb2l (MGP_SPRETEiJ_G0021911) MGP_SPRETEiJ_G0021912 Dscam (MGP_SPRETEiJ_G0021913) Bace2 (MGP_SPRETEiJ_G0021914) MGP_SPRETEiJ_G0021915 Fam3b (MGP_SPRETEiJ_G0021916) Tmprss2 (MGP_SPRETEiJ_G0021917) Ripk4 (MGP_SPRETEiJ_G0021918) Prdm15 (MGP_SPRETEiJ_G0021919) C2cd2 (MGP_SPRETEiJ_G0021920) Zbtb21 (MGP_SPRETEiJ_G0021921) Ryukyu mouse MODERN SPECIES 7 Cldn14 (MGP_CAROLIEiJ_G0020985) Sim2 (MGP_CAROLIEiJ_G0020986) Hlcs (MGP_CAROLIEiJ_G0020987) Ripply3 (MGP_CAROLIEiJ_G0020988) MGP_CAROLIEiJ_G0020989 Ttc3 (MGP_CAROLIEiJ_G0020990) Vps26c (MGP_CAROLIEiJ_G0020991) Dyrk1a (MGP_CAROLIEiJ_G0020992) Kcnj6 (MGP_CAROLIEiJ_G0020993) Kcnj15 (MGP_CAROLIEiJ_G0020994) Erg (MGP_CAROLIEiJ_G0020995) Ets2 (MGP_CAROLIEiJ_G0020996) Psmg1 (MGP_CAROLIEiJ_G0020997) Brwd1 (MGP_CAROLIEiJ_G0020998) MGP_CAROLIEiJ_G0020999 MGP_CAROLIEiJ_G0021000 ##22 Lca5l (MGP_CAROLIEiJ_G0021001) MGP_CAROLIEiJ_G0021002 B3galt5 (MGP_CAROLIEiJ_G0021003) Igsf5 (MGP_CAROLIEiJ_G0021004) Itgb2l (MGP_CAROLIEiJ_G0021005) MGP_CAROLIEiJ_G0021006 Dscam (MGP_CAROLIEiJ_G0021007) Bace2 (MGP_CAROLIEiJ_G0021008) MGP_CAROLIEiJ_G0021009 Fam3b (MGP_CAROLIEiJ_G0021010) MGP_CAROLIEiJ_G0008949 Ripk4 (MGP_CAROLIEiJ_G0021011) Prdm15 (MGP_CAROLIEiJ_G0021012) C2cd2 (MGP_CAROLIEiJ_G0021013) Zbtb21 (MGP_CAROLIEiJ_G0021014) Shrew mouse MODERN SPECIES 3 Cldn14 (MGP_PahariEiJ_G0016690) Sim2 (MGP_PahariEiJ_G0016691) Hlcs (MGP_PahariEiJ_G0016692) Ripply3 (MGP_PahariEiJ_G0016693) MGP_PahariEiJ_G0016694 MGP_PahariEiJ_G0016695 Vps26c (MGP_PahariEiJ_G0016696) Dyrk1a (MGP_PahariEiJ_G0016697) Kcnj6 (MGP_PahariEiJ_G0016698) Kcnj15 (MGP_PahariEiJ_G0016699) Erg (MGP_PahariEiJ_G0016700) Ets2 (MGP_PahariEiJ_G0016701) Psmg1 (MGP_PahariEiJ_G0016702) MGP_PahariEiJ_G0016703 MGP_PahariEiJ_G0016704 MGP_PahariEiJ_G0016705 ##22 Lca5l (MGP_PahariEiJ_G0016706) MGP_PahariEiJ_G0016707 B3galt5 (MGP_PahariEiJ_G0016708) Igsf5 (MGP_PahariEiJ_G0016709) Itgb2l (MGP_PahariEiJ_G0016710) MGP_PahariEiJ_G0016711 Dscam (MGP_PahariEiJ_G0016712) Bace2 (MGP_PahariEiJ_G0016713) MGP_PahariEiJ_G0016714 Fam3b (MGP_PahariEiJ_G0016715) MGP_PahariEiJ_G0008412 Tmprss2 (MGP_PahariEiJ_G0016716) Ripk4 (MGP_PahariEiJ_G0016717) Prdm15 (MGP_PahariEiJ_G0016718) C2cd2 (MGP_PahariEiJ_G0016719) Upper Galilee mountains blind mole rat MODERN SPECIES 531 Kcnj15 (ENSNGAG00000012200) Erg (ENSNGAG00000019090) Ets2 (ENSNGAG00000017753) Psmg1 (ENSNGAG00000018513) ENSNGAG00000000424 ENSNGAG00000001381 Hmgn1 (ENSNGAG00000004731) ENSNGAG00000009726 ##22 Lca5l (ENSNGAG00000013269) ENSNGAG00000001301 B3galt5 (ENSNGAG00000004051) Igsf5 (ENSNGAG00000008533) ENSNGAG00000016455 Dscam (ENSNGAG00000019173) Lesser Egyptian jerboa MODERN SPECIES 54 ENSJJAG00000022662 Ripply3 (ENSJJAG00000014562) ENSJJAG00000022631 ENSJJAG00000011573 ENSJJAG00000018355 Vps26c (ENSJJAG00000012735) Dyrk1a (ENSJJAG00000022874) Kcnj6 (ENSJJAG00000010439) Kcnj15 (ENSJJAG00000016880) Erg (ENSJJAG00000024273) Ets2 (ENSJJAG00000000366) Psmg1 (ENSJJAG00000000631) ENSJJAG00000014608 ENSJJAG00000010871 ENSJJAG00000013400 ENSJJAG00000014499 ##22 Lca5l (ENSJJAG00000017192) ENSJJAG00000018659 Igsf5 (ENSJJAG00000000540) ENSJJAG00000013366 Dscam (ENSJJAG00000010430) Bace2 (ENSJJAG00000006557) ENSJJAG00000012773 ENSJJAG00000023642 ENSJJAG00000023808 Tmprss2 (ENSJJAG00000021090) Ripk4 (ENSJJAG00000023752) Prdm15 (ENSJJAG00000016457) C2cd2 (ENSJJAG00000016581) Zbtb21 (ENSJJAG00000002063) Umodl1 (ENSJJAG00000012073) Rodentia_A ANCESTRAL SPECIES 5 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 Sciuridae ANCESTRAL SPECIES 12 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 Marmotini ANCESTRAL SPECIES 13 ENSGT00940000161312 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00950000182901.a.a.a.b.b ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Alpin marmot MODERN SPECIES 4 CLDN14 (ENSMMMG00000002911) ENSMMMG00000002958 ENSMMMG00000002971 PIGP (ENSMMMG00000002981) TTC3 (ENSMMMG00000003016) VPS26C (ENSMMMG00000003435) DYRK1A (ENSMMMG00000003463) KCNJ6 (ENSMMMG00000003548) KCNJ15 (ENSMMMG00000003594) ERG (ENSMMMG00000003632) ETS2 (ENSMMMG00000004068) PSMG1 (ENSMMMG00000004106) ENSMMMG00000004110 BRWD1 (ENSMMMG00000004116) HMGN1 (ENSMMMG00000004197) GET1 (ENSMMMG00000004202) ##22 LCA5L (ENSMMMG00000004259) SH3BGR (ENSMMMG00000004305) ENSMMMG00000004462 B3GALT5 (ENSMMMG00000004484) ENSMMMG00000004498 PCP4 (ENSMMMG00000004533) DSCAM (ENSMMMG00000004573) BACE2 (ENSMMMG00000004641) FAM3B (ENSMMMG00000004645) MX1 (ENSMMMG00000004765) TMPRSS2 (ENSMMMG00000010132) RIPK4 (ENSMMMG00000010156) PRDM15 (ENSMMMG00000010191) C2CD2 (ENSMMMG00000010233) ENSMMMG00000010266 Marmotini_b ANCESTRAL SPECIES 30 ENSGT00550000074968 ENSGT00940000161312 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00950000182901.a.a.a.b.b ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Squirrel MODERN SPECIES 100 CHAF1B (ENSSTOG00000001427) CLDN14 (ENSSTOG00000023003) HLCS (ENSSTOG00000015476) ENSSTOG00000031463 PIGP (ENSSTOG00000010943) ENSSTOG00000004274 ENSSTOG00000020762 DYRK1A (ENSSTOG00000016151) KCNJ6 (ENSSTOG00000016154) KCNJ15 (ENSSTOG00000000052) ERG (ENSSTOG00000025814) ETS2 (ENSSTOG00000024655) PSMG1 (ENSSTOG00000007084) BRWD1 (ENSSTOG00000027149) HMGN1 (ENSSTOG00000030815) GET1 (ENSSTOG00000012736) ##22 SH3BGR (ENSSTOG00000020100) B3GALT5 (ENSSTOG00000012749) ENSSTOG00000002986 PCP4 (ENSSTOG00000033674) DSCAM (ENSSTOG00000004849) BACE2 (ENSSTOG00000011669) MX1 (ENSSTOG00000012846) FAM3B (ENSSTOG00000006382) TMPRSS2 (ENSSTOG00000012868) RIPK4 (ENSSTOG00000020499) PRDM15 (ENSSTOG00000000262) C2CD2 (ENSSTOG00000015690) ZBTB21 (ENSSTOG00000010003) UMODL1 (ENSSTOG00000027158) ABCG1 (ENSSTOG00000027580) Arctic ground squirrel MODERN SPECIES 212 VPS26C (ENSUPAG00010020169) DYRK1A (ENSUPAG00010020176) KCNJ6 (ENSUPAG00010020183) KCNJ15 (ENSUPAG00010020189) ERG (ENSUPAG00010020197) ETS2 (ENSUPAG00010020230) BRWD1 (ENSUPAG00010020246) ENSUPAG00010020321 ENSUPAG00010020326 ENSUPAG00010020344 ##22 LCA5L (ENSUPAG00010020362) SH3BGR (ENSUPAG00010020382) ENSUPAG00010020395 B3GALT5 (ENSUPAG00010020398) ENSUPAG00010020403 PCP4 (ENSUPAG00010020435) DSCAM (ENSUPAG00010020438) BACE2 (ENSUPAG00010020456) Eurasian red squirrel MODERN SPECIES 1 ENSSVLG00005020331 ENSSVLG00005020110 ENSSVLG00005020080 ENSSVLG00005020036 ENSSVLG00005019788 ENSSVLG00005019993 DYRK1A (ENSSVLG00005019571) KCNJ6 (ENSSVLG00005019383) KCNJ15 (ENSSVLG00005019329) ERG (ENSSVLG00005018996) ETS2 (ENSSVLG00005018858) PSMG1 (ENSSVLG00005018720) ENSSVLG00005018680 ENSSVLG00005018655 ENSSVLG00005018529 GET1 (ENSSVLG00005018408) ##22 LCA5L (ENSSVLG00005018302) SH3BGR (ENSSVLG00005018209) B3GALT5 (ENSSVLG00005018186) ENSSVLG00005018094 PCP4 (ENSSVLG00005018045) DSCAM (ENSSVLG00005017352) BACE2 (ENSSVLG00005017213) ENSSVLG00005016342 FAM3B (ENSSVLG00005016099) ENSSVLG00005015978 TMPRSS2 (ENSSVLG00005015845) RIPK4 (ENSSVLG00005015741) PRDM15 (ENSSVLG00005015213) C2CD2 (ENSSVLG00005015130) ZBTB21 (ENSSVLG00005015081) Hystricomorpha ANCESTRAL SPECIES 18 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771.bb ENSGT00940000154465.C.w ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b.m ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000044048 TTC3 (ENSHGLG00000005139) VPS26C (ENSHGLG00000005099) DYRK1A (ENSHGLG00000004983) KCNJ6 (ENSHGLG00000018429) KCNJ15 (ENSHGLG00000046846) ERG (ENSHGLG00000017640) ENSHGLG00000042102 ETS2 (ENSHGLG00000017830) ENSHGLG00000045422 PSMG1 (ENSHGLG00000017867) ENSHGLG00000017831 ENSHGLG00000042854 ENSHGLG00000034155 ENSHGLG00000013690 GET1 (ENSHGLG00000012972) ##22 ENSHGLG00000015714 ENSHGLG00000044589 SH3BGR (ENSHGLG00000015469) ENSHGLG00000040175 ENSHGLG00000015085 ENSHGLG00000045024 ENSHGLG00000014926 ENSHGLG00000033972 ENSHGLG00000038478 ENSHGLG00000015303 ENSHGLG00000014759 ENSHGLG00000040770 Hystricomorpha_a ANCESTRAL SPECIES 37 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771.bb ENSGT00940000154465.C.w ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b.m ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00390000011821.a ENSGT00390000008490 ENSGT00940000154989 ENSGT00940000160159 ENSGT00950000183152.B.c.a ENSGT00510000047027 ENSGT00940000159505.x ENSGT00390000012196 ENSGT00390000012174 ENSGT00940000155587.a.b ENSGT00940000159245 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 39 UHMK1 (ENSCPOG00000004561) UAP1 (ENSCPOG00000004568) DDR2 (ENSCPOG00000009721) HSD17B7 (ENSCPOG00000030957) CCDC190 (ENSCPOG00000038251) RGS4 (ENSCPOG00000031194) RGS5 (ENSCPOG00000033467) ENSCPOG00000039704 NUF2 (ENSCPOG00000015019) PBX1 (ENSCPOG00000005958) ENSCPOG00000038291 ##22 LMX1A (ENSCPOG00000025320) RXRG (ENSCPOG00000015343) LRRC52 (ENSCPOG00000015344) MGST3 (ENSCPOG00000015346) ALDH9A1 (ENSCPOG00000015347) TMCO1 (ENSCPOG00000013728) UCK2 (ENSCPOG00000032384) FAM78B (ENSCPOG00000007868) ENSCPOG00000005192 ENSCPOG00000026225 ENSCPOG00000022892 POGK (ENSCPOG00000026820) TADA1 (ENSCPOG00000025598) ILDR2 (ENSCPOG00000024220) MAEL (ENSCPOG00000005046) Guinea pig MODERN SPECIES 90 SIM2 (ENSCPOG00000023156) HLCS (ENSCPOG00000007955) ENSCPOG00000007156 ENSCPOG00000032684 ENSCPOG00000007158 VPS26C (ENSCPOG00000013144) DYRK1A (ENSCPOG00000037211) KCNJ6 (ENSCPOG00000009568) KCNJ15 (ENSCPOG00000019502) ERG (ENSCPOG00000007484) ETS2 (ENSCPOG00000015014) PSMG1 (ENSCPOG00000027117) ENSCPOG00000010784 ENSCPOG00000039624 HMGN1 (ENSCPOG00000033135) GET1 (ENSCPOG00000040238) ##22 LCA5L (ENSCPOG00000021836) SH3BGR (ENSCPOG00000003488) B3GALT5 (ENSCPOG00000035318) ENSCPOG00000004718 RRP1B (ENSCPOG00000002396) HSF2BP (ENSCPOG00000002394) SIK1 (ENSCPOG00000026214) Cryaa (ENSCPOG00000004350) U2AF1 (ENSCPOG00000004893) CBS (ENSCPOG00000007817) PKNOX1 (ENSCPOG00000039252) ENSCPOG00000035722 WDR4 (ENSCPOG00000037037) PDE9A (ENSCPOG00000014197) SLC37A1 (ENSCPOG00000011616) Hystricomorpha_b ANCESTRAL SPECIES 34 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771.bb ENSGT00940000154465.C.w ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b.m ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00390000011821.a ENSGT00390000008490 ENSGT00940000154989 ENSGT00940000160159 ENSGT00950000183152.B.c.a ENSGT00510000047027 ENSGT00940000159505.x ENSGT00390000012196 ENSGT00390000012174 ENSGT00940000155587.a.b ENSGT00940000159245 Long-tailed chinchilla MODERN SPECIES 114 HLCS (ENSCLAG00000004714) ENSCLAG00000006237 ENSCLAG00000006455 ENSCLAG00000008569 ENSCLAG00000009431 VPS26C (ENSCLAG00000010591) DYRK1A (ENSCLAG00000011834) KCNJ6 (ENSCLAG00000005671) ENSCLAG00000008450 KCNJ15 (ENSCLAG00000007017) ERG (ENSCLAG00000005608) ETS2 (ENSCLAG00000005803) PSMG1 (ENSCLAG00000006759) ENSCLAG00000004395 HMGN1 (ENSCLAG00000005744) GET1 (ENSCLAG00000005886) ##22 SH3BGR (ENSCLAG00000008599) ENSCLAG00000008933 B3GALT5 (ENSCLAG00000009203) ENSCLAG00000006218 ENSCLAG00000008829 RRP1B (ENSCLAG00000005622) HSF2BP (ENSCLAG00000006525) SIK1 (ENSCLAG00000004717) CRYAA (ENSCLAG00000008715) U2AF1 (ENSCLAG00000009589) CBS (ENSCLAG00000012158) PKNOX1 (ENSCLAG00000009292) NDUFV3 (ENSCLAG00000010460) WDR4 (ENSCLAG00000004584) PDE9A (ENSCLAG00000005531) Degu MODERN SPECIES 86 PIGP (ENSODEG00000011154) ENSODEG00000012435 ENSODEG00000012671 VPS26C (ENSODEG00000011654) ENSODEG00000019985 DYRK1A (ENSODEG00000011707) KCNJ6 (ENSODEG00000011396) ENSODEG00000011894 KCNJ15 (ENSODEG00000012281) ERG (ENSODEG00000011796) ETS2 (ENSODEG00000012054) PSMG1 (ENSODEG00000013481) ENSODEG00000012050 ENSODEG00000011845 GET1 (ENSODEG00000011999) ##22 LCA5L (ENSODEG00000012419) SH3BGR (ENSODEG00000013522) ENSODEG00000013679 ENSODEG00000012206 ENSODEG00000013785 RRP1B (ENSODEG00000013177) HSF2BP (ENSODEG00000011763) SIK1 (ENSODEG00000012072) CRYAA (ENSODEG00000014166) U2AF1 (ENSODEG00000014749) CBS (ENSODEG00000012996) PKNOX1 (ENSODEG00000012122) ENSODEG00000014099 ENSODEG00000012402 WDR4 (ENSODEG00000012553) Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00390000011549 ENSGT00950000182802.A ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00950000185378 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.b ENSGT00940000164489 ENSGT00390000011549 ENSGT00950000182802.A.bb ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b ENSGT00940000161526.a ENSGT00940000161526.b ENSGT00940000159908 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00950000185378 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.bb ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b ENSGT00940000161526.a ENSGT00940000161526.b ENSGT00940000159908 Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000161526.a ENSGT00940000161526.b ENSGT00940000159908 ENSGT00940000157890 Equus ANCESTRAL SPECIES 42 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163258.b ENSGT00940000161526.b.b.a.a.a ENSGT00940000159908 ENSGT00940000157890 Donkey MODERN SPECIES 9 SIM2 (ENSEASG00005006092) HLCS (ENSEASG00005006090) RIPPLY3 (ENSEASG00005033801) ENSEASG00005025788 ENSEASG00005006084 ENSEASG00005032100 VPS26C (ENSEASG00005006082) DYRK1A (ENSEASG00005006080) KCNJ6 (ENSEASG00005006078) KCNJ15 (ENSEASG00005025006) ERG (ENSEASG00005006076) ETS2 (ENSEASG00005006072) PSMG1 (ENSEASG00005006069) BRWD1 (ENSEASG00005006066) HMGN1 (ENSEASG00005036575) GET1 (ENSEASG00005027299) ##22 LCA5L (ENSEASG00005006060) SH3BGR (ENSEASG00005006056) B3GALT5 (ENSEASG00005032992) ENSEASG00005006052 PCP4 (ENSEASG00005028031) DSCAM (ENSEASG00005006046) BACE2 (ENSEASG00005006036) FAM3B (ENSEASG00005029773) MX2 (ENSEASG00005004002) MX1 (ENSEASG00005003911) ENSEASG00005003908 ENSEASG00005032518 ENSEASG00005014723 ENSEASG00005024756 PRDM15 (ENSEASG00005003891) Horse MODERN SPECIES 18 RIPPLY3 (ENSECAG00000018917) PIGP (ENSECAG00000019349) TTC3 (ENSECAG00000019685) ENSECAG00000003520 ENSECAG00000049180 ENSECAG00000059353 VPS26C (ENSECAG00000023577) DYRK1A (ENSECAG00000024965) KCNJ6 (ENSECAG00000004703) KCNJ15 (ENSECAG00000008811) ERG (ENSECAG00000010667) ETS2 (ENSECAG00000021269) PSMG1 (ENSECAG00000060286) BRWD1 (ENSECAG00000022262) ENSECAG00000059753 GET1 (ENSECAG00000007859) ##22 LCA5L (ENSECAG00000008618) SH3BGR (ENSECAG00000010747) B3GALT5 (ENSECAG00000004805) IGSF5 (ENSECAG00000012049) PCP4 (ENSECAG00000012551) DSCAM (ENSECAG00000012936) BACE2 (ENSECAG00000005305) FAM3B (ENSECAG00000043951) MX2 (ENSECAG00000049815) MX1 (ENSECAG00000011776) TMPRSS2 (ENSECAG00000022289) ENSECAG00000053969 ENSECAG00000007982 ENSECAG00000015072 RIPK4 (ENSECAG00000008330) Chiroptera ANCESTRAL SPECIES 35 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163845 ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Megabat MODERN SPECIES 2639 GET1 (ENSPVAG00000012464) ##22 LCA5L (ENSPVAG00000012465) SH3BGR (ENSPVAG00000012466) Microchiroptera ANCESTRAL SPECIES 37 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163845 ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a Greater horseshoe bat MODERN SPECIES 11 ENSRFEG00010002789 PIGP (ENSRFEG00010002809) TTC3 (ENSRFEG00010002881) VPS26C (ENSRFEG00010002992) DYRK1A (ENSRFEG00010003073) KCNJ6 (ENSRFEG00010003110) KCNJ15 (ENSRFEG00010003123) ERG (ENSRFEG00010003217) ETS2 (ENSRFEG00010003341) ENSRFEG00010003371 PSMG1 (ENSRFEG00010003385) ENSRFEG00010003400 BRWD1 (ENSRFEG00010003441) ENSRFEG00010003531 ENSRFEG00010003567 GET1 (ENSRFEG00010003643) ##22 ENSRFEG00010003681 ENSRFEG00010003692 SH3BGR (ENSRFEG00010003716) B3GALT5 (ENSRFEG00010003750) ENSRFEG00010003825 PCP4 (ENSRFEG00010003849) DSCAM (ENSRFEG00010003886) BACE2 (ENSRFEG00010003983) MX2 (ENSRFEG00010004048) TMPRSS2 (ENSRFEG00010004092) ENSRFEG00010004128 RIPK4 (ENSRFEG00010004153) PRDM15 (ENSRFEG00010004214) C2CD2 (ENSRFEG00010004326) ZBTB21 (ENSRFEG00010004342) Microbat MODERN SPECIES 1309 KCNJ15 (ENSMLUG00000002815) ERG (ENSMLUG00000009355) ETS2 (ENSMLUG00000009370) PSMG1 (ENSMLUG00000006122) BRWD1 (ENSMLUG00000006128) GET1 (ENSMLUG00000001064) ##22 LCA5L (ENSMLUG00000013494) ENSMLUG00000013499 Carnivora ANCESTRAL SPECIES 10 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00950000185378 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.bb ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163845 ENSGT00940000163441.f.a.b ENSGT00940000161526.a ENSGT00940000161526.b Felidae ANCESTRAL SPECIES 9 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771.o.b ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.bb ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.b.a.b ENSGT00940000161526.a ENSGT00940000161526.b ENSGT00940000159908 ENSGT00940000157890 Panthera ANCESTRAL SPECIES 17 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771.o.b ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.bb ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 ENSGT00940000159975 ENSGT00940000160131 Panthera_a ANCESTRAL SPECIES 21 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771.o.b ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000155207.a.b lion MODERN SPECIES 9 SIM2 (ENSPLOG00000009477) HLCS (ENSPLOG00000009617) RIPPLY3 (ENSPLOG00000009670) ENSPLOG00000009707 ENSPLOG00000009813 ENSPLOG00000009872 ENSPLOG00000009977 VPS26C (ENSPLOG00000010027) DYRK1A (ENSPLOG00000010164) KCNJ6 (ENSPLOG00000010233) KCNJ15 (ENSPLOG00000010261) ERG (ENSPLOG00000011044) ETS2 (ENSPLOG00000011156) PSMG1 (ENSPLOG00000011266) BRWD1 (ENSPLOG00000011385) GET1 (ENSPLOG00000011476) ##22 LCA5L (ENSPLOG00000011547) SH3BGR (ENSPLOG00000011642) B3GALT5 (ENSPLOG00000011684) PCP4 (ENSPLOG00000011697) DSCAM (ENSPLOG00000011858) BACE2 (ENSPLOG00000012363) FAM3B (ENSPLOG00000012689) MX1 (ENSPLOG00000012833) TMPRSS2 (ENSPLOG00000013265) ENSPLOG00000013356 ENSPLOG00000013430 ENSPLOG00000013454 RIPK4 (ENSPLOG00000013487) PRDM15 (ENSPLOG00000013728) C2CD2 (ENSPLOG00000014058) leopard MODERN SPECIES 81 SIM2 (ENSPPRG00000008583) HLCS (ENSPPRG00000008534) RIPPLY3 (ENSPPRG00000008392) ENSPPRG00000008374 ENSPPRG00000008294 ENSPPRG00000007946 ENSPPRG00000007596 VPS26C (ENSPPRG00000007535) DYRK1A (ENSPPRG00000007385) KCNJ6 (ENSPPRG00000006638) KCNJ15 (ENSPPRG00000019894) ERG (ENSPPRG00000006437) ETS2 (ENSPPRG00000006275) PSMG1 (ENSPPRG00000006180) HMGN1 (ENSPPRG00000005458) GET1 (ENSPPRG00000005407) ##22 LCA5L (ENSPPRG00000004820) SH3BGR (ENSPPRG00000004726) B3GALT5 (ENSPPRG00000004649) PCP4 (ENSPPRG00000004577) DSCAM (ENSPPRG00000004553) BACE2 (ENSPPRG00000003944) FAM3B (ENSPPRG00000003865) MX1 (ENSPPRG00000003339) TMPRSS2 (ENSPPRG00000002829) Tiger MODERN SPECIES 321 HLCS (ENSPTIG00000011329) RIPPLY3 (ENSPTIG00000012747) PIGP (ENSPTIG00000012877) ENSPTIG00000014304 ENSPTIG00000015431 ENSPTIG00000016074 VPS26C (ENSPTIG00000016242) DYRK1A (ENSPTIG00000017042) KCNJ6 (ENSPTIG00000018401) KCNJ15 (ENSPTIG00000018526) ERG (ENSPTIG00000019250) ETS2 (ENSPTIG00000021524) PSMG1 (ENSPTIG00000021655) BRWD1 (ENSPTIG00000021862) HMGN1 (ENSPTIG00000009429) GET1 (ENSPTIG00000009749) ##22 LCA5L (ENSPTIG00000010441) SH3BGR (ENSPTIG00000011349) B3GALT5 (ENSPTIG00000012211) PCP4 (ENSPTIG00000012652) DSCAM (ENSPTIG00000012935) BACE2 (ENSPTIG00000015773) FAM3B (ENSPTIG00000016871) MX1 (ENSPTIG00000017829) TMPRSS2 (ENSPTIG00000018133) PRDM15 (ENSPTIG00000019585) C2CD2 (ENSPTIG00000020254) Cat MODERN SPECIES 240 RIPPLY3 (ENSFCAG00000043170) ENSFCAG00000038780 ENSFCAG00000043461 ENSFCAG00000023776 ENSFCAG00000044240 VPS26C (ENSFCAG00000012830) DYRK1A (ENSFCAG00000024560) KCNJ6 (ENSFCAG00000005152) KCNJ15 (ENSFCAG00000025648) ERG (ENSFCAG00000007485) ETS2 (ENSFCAG00000007489) ENSFCAG00000053464 PSMG1 (ENSFCAG00000038855) BRWD1 (ENSFCAG00000031344) ENSFCAG00000046512 GET1 (ENSFCAG00000042925) ##22 LCA5L (ENSFCAG00000008508) SH3BGR (ENSFCAG00000004671) B3GALT5 (ENSFCAG00000004673) IGSF5 (ENSFCAG00000004674) PCP4 (ENSFCAG00000035623) DSCAM (ENSFCAG00000008209) BACE2 (ENSFCAG00000001969) FAM3B (ENSFCAG00000001970) MX1 (ENSFCAG00000008068) TMPRSS2 (ENSFCAG00000008071) ENSFCAG00000053296 ENSFCAG00000044509 ENSFCAG00000039699 RIPK4 (ENSFCAG00000012694) PRDM15 (ENSFCAG00000012695) Caniformia ANCESTRAL SPECIES ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00950000185378 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.bb ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163845 ENSGT00940000163441.f.a.b ENSGT00940000161526.a ENSGT00940000161526.b Canidae ANCESTRAL SPECIES 39 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a.`b ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000016972.b ENSGT00950000182802.A.ab.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.a.b.b ENSGT00940000161526.b ENSGT00940000159908 ENSGT00940000157890.c Canis_lupus ANCESTRAL SPECIES 38 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a.`b ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000016972.b ENSGT00950000182802.A.ab.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000155183.a.a ENSGT01100000263929 ENSGT00940000161526.b ENSGT00940000159908 Dog MODERN SPECIES 24 HLCS (ENSCAFG00845027738) RIPPLY3 (ENSCAFG00845027840) ENSCAFG00845027926 TTC3 (ENSCAFG00845028091) VPS26C (ENSCAFG00845028583) DYRK1A (ENSCAFG00845028759) ENSCAFG00845028884 KCNJ6 (ENSCAFG00845028925) KCNJ15 (ENSCAFG00845028983) ERG (ENSCAFG00845029042) ETS2 (ENSCAFG00845029168) ENSCAFG00845029206 BRWD1 (ENSCAFG00845029268) ENSCAFG00845029559 HMGN1 (ENSCAFG00845029582) GET1 (ENSCAFG00845029628) ##22 LCA5L (ENSCAFG00845029679) SH3BGR (ENSCAFG00845029733) B3GALT5 (ENSCAFG00845029783) IGSF5 (ENSCAFG00845029797) PCP4 (ENSCAFG00845029822) DSCAM (ENSCAFG00845029877) BACE2 (ENSCAFG00845030032) FAM3B (ENSCAFG00845030073) MX1 (ENSCAFG00845030104) TMPRSS2 (ENSCAFG00845030150) ENSCAFG00845030190 ENSCAFG00845030203 ENSCAFG00845030213 RIPK4 (ENSCAFG00845030222) PRDM15 (ENSCAFG00845030258) Dingo MODERN SPECIES 328 ENSCAFG00020024407 ENSCAFG00020024400 ENSCAFG00020024394 ENSCAFG00020024382 VPS26C (ENSCAFG00020024376) DYRK1A (ENSCAFG00020024369) KCNJ6 (ENSCAFG00020024367) KCNJ15 (ENSCAFG00020024361) ERG (ENSCAFG00020024360) ETS2 (ENSCAFG00020024353) PSMG1 (ENSCAFG00020024349) ENSCAFG00020024347 ENSCAFG00020024338 ENSCAFG00020024332 ENSCAFG00020024329 GET1 (ENSCAFG00020024327) ##22 LCA5L (ENSCAFG00020024326) SH3BGR (ENSCAFG00020024325) B3GALT5 (ENSCAFG00020024324) ENSCAFG00020024323 PCP4 (ENSCAFG00020024321) DSCAM (ENSCAFG00020024318) BACE2 (ENSCAFG00020024310) Red fox MODERN SPECIES 245 KCNJ15 (ENSVVUG00000024488) ERG (ENSVVUG00000024490) ETS2 (ENSVVUG00000024499) PSMG1 (ENSVVUG00000024504) ENSVVUG00000024512 ENSVVUG00000024600 ENSVVUG00000025852 WRB (ENSVVUG00000025853) ##22 LCA5L (ENSVVUG00000025854) SH3BGR (ENSVVUG00000025857) ENSVVUG00000025859 B3GALT5 (ENSVVUG00000025865) Caniformia_b ANCESTRAL SPECIES ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00950000185378 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.bb ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163845 ENSGT00940000159908 ENSGT00940000157890.c ENSGT00940000157890.d Ursidae ANCESTRAL SPECIES 1 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00950000185378 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.bb ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163845.i ENSGT00940000159908 ENSGT00940000157890.c ENSGT00940000157890.d Ursus ANCESTRAL SPECIES 49 ENSGT00550000074968 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00530000064267 American black bear MODERN SPECIES 612 PSMG1 (ENSUAMG00000007274) BRWD1 (ENSUAMG00000007224) GET1 (ENSUAMG00000007212) ##22 LCA5L (ENSUAMG00000007210) Polar bear MODERN SPECIES 240 CHAF1B (ENSUMAG00000020659) ENSUMAG00000020663 SIM2 (ENSUMAG00000020665) HLCS (ENSUMAG00000000070) RIPPLY3 (ENSUMAG00000000142) PIGP (ENSUMAG00000000187) TTC3 (ENSUMAG00000000221) VPS26C (ENSUMAG00000000275) DYRK1A (ENSUMAG00000000314) KCNJ6 (ENSUMAG00000000333) KCNJ15 (ENSUMAG00000000438) ERG (ENSUMAG00000000447) ETS2 (ENSUMAG00000000475) PSMG1 (ENSUMAG00000000490) BRWD1 (ENSUMAG00000000587) GET1 (ENSUMAG00000001833) ##22 LCA5L (ENSUMAG00000001836) SH3BGR (ENSUMAG00000001849) B3GALT5 (ENSUMAG00000001861) PCP4 (ENSUMAG00000001875) Giant Panda MODERN SPECIES CHAF1B (ENSAMEG00000005560) CLDN14 (ENSAMEG00000018735) SIM2 (ENSAMEG00000005588) HLCS (ENSAMEG00000005602) ENSAMEG00000028137 VPS26C (ENSAMEG00000009425) DYRK1A (ENSAMEG00000018223) KCNJ6 (ENSAMEG00000018222) ENSAMEG00000029134 KCNJ15 (ENSAMEG00000005431) ERG (ENSAMEG00000016610) ETS2 (ENSAMEG00000016631) PSMG1 (ENSAMEG00000014078) BRWD1 (ENSAMEG00000014080) HMGN1 (ENSAMEG00000014100) GET1 (ENSAMEG00000014104) ##22 LCA5L (ENSAMEG00000014108) SH3BGR (ENSAMEG00000028047) B3GALT5 (ENSAMEG00000019434) ENSAMEG00000006410 DSCAM (ENSAMEG00000005759) BACE2 (ENSAMEG00000005103) FAM3B (ENSAMEG00000005115) MX1 (ENSAMEG00000010494) TMPRSS2 (ENSAMEG00000010563) ENSAMEG00000024617 ENSAMEG00000031524 RIPK4 (ENSAMEG00000002205) PRDM15 (ENSAMEG00000002162) C2CD2 (ENSAMEG00000002123) ZBTB21 (ENSAMEG00000028624) Mustelinae ANCESTRAL SPECIES 67 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.bb ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890.c ENSGT00530000063764.a ENSGT00940000161028 American mink MODERN SPECIES 368 ENSNVIG00000002022 ENSNVIG00000002072 ##22 PHF14 (ENSNVIG00000002124) THSD7A (ENSNVIG00000002491) Ferret MODERN SPECIES 248 HLCS (ENSMPUG00000008271) RIPPLY3 (ENSMPUG00000008305) PIGP (ENSMPUG00000008312) TTC3 (ENSMPUG00000008316) VPS26C (ENSMPUG00000008447) DYRK1A (ENSMPUG00000008456) KCNJ6 (ENSMPUG00000008470) KCNJ15 (ENSMPUG00000019063) ERG (ENSMPUG00000008474) ENSMPUG00000008483 ENSMPUG00000008489 ETS2 (ENSMPUG00000008494) PSMG1 (ENSMPUG00000008503) BRWD1 (ENSMPUG00000008515) HMGN1 (ENSMPUG00000008550) GET1 (ENSMPUG00000008557) ##22 LCA5L (ENSMPUG00000008561) SH3BGR (ENSMPUG00000008609) B3GALT5 (ENSMPUG00000008621) ENSMPUG00000008652 PCP4 (ENSMPUG00000008663) ENSMPUG00000008669 ENSMPUG00000008687 BACE2 (ENSMPUG00000008693) FAM3B (ENSMPUG00000008701) MX2 (ENSMPUG00000008716) MX1 (ENSMPUG00000008778) TMPRSS2 (ENSMPUG00000008804) ENSMPUG00000008922 RIPK4 (ENSMPUG00000008928) PRDM15 (ENSMPUG00000008938) Artiodactyla ANCESTRAL SPECIES 2 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00950000185378 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.b ENSGT00950000182802.A.ab.a.a.a.a.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b ENSGT00940000161526.a ENSGT00940000161526.b ENSGT00940000159908 Suina ANCESTRAL SPECIES 35 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.a.a.a.a.b.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.a.b ENSGT00940000163441.f.a.b ENSGT00940000161526.b ENSGT00940000159908 Pig MODERN SPECIES 4 CLDN14 (ENSSSCG00000020680) SIM2 (ENSSSCG00000027179) HLCS (ENSSSCG00000012059) PIGP (ENSSSCG00000012061) TTC3 (ENSSSCG00000012062) VPS26C (ENSSSCG00000012063) DYRK1A (ENSSSCG00000030480) KCNJ6 (ENSSSCG00000012065) KCNJ15 (ENSSSCG00000012066) ERG (ENSSSCG00000022318) ETS2 (ENSSSCG00000038948) PSMG1 (ENSSSCG00000062206) BRWD1 (ENSSSCG00000021042) ENSSSCG00000033733 ENSSSCG00000051671 GET1 (ENSSSCG00000037381) ##22 LCA5L (ENSSSCG00000028122) SH3BGR (ENSSSCG00000029219) ENSSSCG00000050754 ENSSSCG00000038056 ENSSSCG00000012071 PCP4 (ENSSSCG00000037110) DSCAM (ENSSSCG00000012072) ENSSSCG00000012074 FAM3B (ENSSSCG00000012075) MX2 (ENSSSCG00000012076) MX1 (ENSSSCG00000012077) TMPRSS2 (ENSSSCG00000024336) ENSSSCG00000020673 ENSSSCG00000036487 RIPK4 (ENSSSCG00000012083) Artiodactyla_a ANCESTRAL SPECIES 8 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00950000185378 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.b ENSGT00950000182802.A.ab.a.a.a.a.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b.c.a.b ENSGT00940000161526.a ENSGT00940000161526.b ENSGT00940000159908 Camelidae ANCESTRAL SPECIES ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.a.a.a.a.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Alpaca MODERN SPECIES 2813 ENSVPAG00000000013 GET1 (ENSVPAG00000000015) ##22 Arabian camel MODERN SPECIES SIM2 (ENSCDRG00005006306) HLCS (ENSCDRG00005006543) RIPPLY3 (ENSCDRG00005006597) ENSCDRG00005006635 TTC3 (ENSCDRG00005006786) VPS26C (ENSCDRG00005006994) DYRK1A (ENSCDRG00005007271) KCNJ6 (ENSCDRG00005007336) KCNJ15 (ENSCDRG00005007361) ERG (ENSCDRG00005007389) ETS2 (ENSCDRG00005007775) PSMG1 (ENSCDRG00005007842) BRWD1 (ENSCDRG00005007896) ENSCDRG00005008049 ENSCDRG00005008082 GET1 (ENSCDRG00005008195) ##22 LCA5L (ENSCDRG00005008281) ENSCDRG00005008380 B3GALT5 (ENSCDRG00005008464) ENSCDRG00005008490 PCP4 (ENSCDRG00005008560) DSCAM (ENSCDRG00005008610) BACE2 (ENSCDRG00005008744) FAM3B (ENSCDRG00005008840) ENSCDRG00005009009 ENSCDRG00005009188 ENSCDRG00005009225 ENSCDRG00005009289 ENSCDRG00005009347 TMPRSS2 (ENSCDRG00005009423) ENSCDRG00005009585 Artiodactyla_b ANCESTRAL SPECIES 6 ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00950000185378 ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.b.a.b ENSGT00950000182802.A.ab.a.a.a.a.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b.c.a.b ENSGT00940000161526.a ENSGT00940000161526.b ENSGT00940000159908 Cetacea ANCESTRAL SPECIES 10 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429.a.a ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.a.a.a.a.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Odontoceti ANCESTRAL SPECIES 9 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429.a.a ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.a.a.a.a.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Odontoceti_a ANCESTRAL SPECIES 8 ENSGT00940000161312 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429.a.a ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b.c ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.a.a.a.a.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000159908 ENSGT00940000157890 ENSGT00530000063764.a ENSGT00940000161028 Odontoceti_b ANCESTRAL SPECIES 9 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429.a.a ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b.c ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00950000183178.b.a.jb.b ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.a.a.a.a.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00950000182802.A.ab.b.b ENSGT00940000159953.A ENSGT00940000159908 ENSGT00940000157890 Monodontidae ANCESTRAL SPECIES 11 ENSGT00940000159985 ENSGT00390000002960 ENSGT00730000111429.a.a ENSGT00390000013771.c ENSGT00940000154465.C ENSGT00950000183064.b.c ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00950000183178.b.a.jb.b ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.a.a.a.a.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00950000182802.A.ab.b.b ENSGT01030000236716 ENSGT00940000159953.A ENSGT00940000159908 Beluga whale MODERN SPECIES 111 SIM2 (ENSDLEG00000020114) HLCS (ENSDLEG00000020112) RIPPLY3 (ENSDLEG00000020108) ENSDLEG00000020104 TTC3 (ENSDLEG00000020057) ENSDLEG00000020039 DYRK1A (ENSDLEG00000020030) KCNJ6 (ENSDLEG00000020019) KCNJ15 (ENSDLEG00000020013) ERG (ENSDLEG00000019992) ETS2 (ENSDLEG00000019986) ENSDLEG00000019984 PSMG1 (ENSDLEG00000019972) ENSDLEG00000019966 ENSDLEG00000017476 WRB (ENSDLEG00000017158) ##22 LCA5L (ENSDLEG00000017127) SH3BGR (ENSDLEG00000017102) B3GALT5 (ENSDLEG00000017088) IGSF5 (ENSDLEG00000017082) PCP4 (ENSDLEG00000017075) DSCAM (ENSDLEG00000021237) BACE2 (ENSDLEG00000021225) FAM3B (ENSDLEG00000021216) ENSDLEG00000021211 ENSDLEG00000021207 TMPRSS2 (ENSDLEG00000021202) ENSDLEG00000021198 ENSDLEG00000021194 RIPK4 (ENSDLEG00000021191) PRDM15 (ENSDLEG00000021181) Narwhal MODERN SPECIES 297 SIM2 (ENSMMNG00015004676) HLCS (ENSMMNG00015004663) RIPPLY3 (ENSMMNG00015004658) ENSMMNG00015004651 TTC3 (ENSMMNG00015004584) ENSMMNG00015004538 DYRK1A (ENSMMNG00015004461) KCNJ6 (ENSMMNG00015004422) KCNJ15 (ENSMMNG00015004403) ERG (ENSMMNG00015004343) ETS2 (ENSMMNG00015004287) ENSMMNG00015004276 PSMG1 (ENSMMNG00015004262) BRWD1 (ENSMMNG00015004196) ENSMMNG00015004161 GET1 (ENSMMNG00015004133) ##22 LCA5L (ENSMMNG00015004108) SH3BGR (ENSMMNG00015004078) B3GALT5 (ENSMMNG00015004063) ENSMMNG00015004044 PCP4 (ENSMMNG00015004028) DSCAM (ENSMMNG00015003949) BACE2 (ENSMMNG00015003863) FAM3B (ENSMMNG00015003809) ENSMMNG00015003775 ENSMMNG00015003743 TMPRSS2 (ENSMMNG00015003713) ENSMMNG00015003689 ENSMMNG00015003659 ENSMMNG00015003646 RIPK4 (ENSMMNG00015003627) Vaquita MODERN SPECIES 15 SIM2 (ENSPSNG00000002674) HLCS (ENSPSNG00000002751) ENSPSNG00000002780 PIGP (ENSPSNG00000002811) TTC3 (ENSPSNG00000002862) VPS26C (ENSPSNG00000002949) DYRK1A (ENSPSNG00000003052) KCNJ6 (ENSPSNG00000003108) KCNJ15 (ENSPSNG00000003129) ERG (ENSPSNG00000003229) ETS2 (ENSPSNG00000003466) ENSPSNG00000003490 PSMG1 (ENSPSNG00000003503) BRWD1 (ENSPSNG00000003542) ENSPSNG00000003581 GET1 (ENSPSNG00000003633) ##22 LCA5L (ENSPSNG00000003698) SH3BGR (ENSPSNG00000003727) B3GALT5 (ENSPSNG00000003756) ENSPSNG00000003781 PCP4 (ENSPSNG00000003804) DSCAM (ENSPSNG00000003835) BACE2 (ENSPSNG00000003936) FAM3B (ENSPSNG00000003986) ENSPSNG00000004017 TMPRSS2 (ENSPSNG00000004031) ENSPSNG00000004058 ENSPSNG00000004073 RIPK4 (ENSPSNG00000004086) PRDM15 (ENSPSNG00000004163) C2CD2 (ENSPSNG00000004376) Blue whale MODERN SPECIES 15 HLCS (ENSBMSG00010004479) ENSBMSG00010004502 PIGP (ENSBMSG00010004522) ENSBMSG00010004553 ENSBMSG00010004595 VPS26C (ENSBMSG00010004644) DYRK1A (ENSBMSG00010004717) KCNJ6 (ENSBMSG00010004842) KCNJ15 (ENSBMSG00010004859) ERG (ENSBMSG00010004899) ETS2 (ENSBMSG00010005046) PSMG1 (ENSBMSG00010005067) BRWD1 (ENSBMSG00010005088) ENSBMSG00010005108 ENSBMSG00010005116 GET1 (ENSBMSG00010005140) ##22 LCA5L (ENSBMSG00010005153) ENSBMSG00010005171 B3GALT5 (ENSBMSG00010005204) ENSBMSG00010005220 PCP4 (ENSBMSG00010005232) DSCAM (ENSBMSG00010005253) BACE2 (ENSBMSG00010005328) FAM3B (ENSBMSG00010005351) ENSBMSG00010005372 ENSBMSG00010005388 MX1 (ENSBMSG00010005420) TMPRSS2 (ENSBMSG00010005432) ENSBMSG00010005449 ENSBMSG00010005452 RIPK4 (ENSBMSG00010005460) Pecora ANCESTRAL SPECIES 8 ENSGT00940000160993 ENSGT01030000234667.a.a.a.b ENSGT00390000017582 ENSGT00940000160450 ENSGT00940000155519 ENSGT00390000011422 ENSGT00390000016224.j.a ENSGT01030000235108 ENSGT00940000160525 ENSGT00390000010145.c.b ENSGT00940000156421 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.b.a.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b.c.a.b ENSGT00940000161526.a ENSGT00940000161526.b.j ENSGT00940000159908 Percora_a ANCESTRAL SPECIES 7 ENSGT00940000160993 ENSGT01030000234667.a.a.a.b ENSGT00390000017582 ENSGT00940000160450 ENSGT00940000155519 ENSGT00390000011422 ENSGT00390000016224.j.a ENSGT01030000235108 ENSGT00940000160525 ENSGT00390000010145.c.b ENSGT00940000156421 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.b.a.b.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b.c.a.b.a ENSGT00940000161526.a ENSGT00940000161526.b.j ENSGT00940000159908 Bovidae ANCESTRAL SPECIES 9 ENSGT00940000160993 ENSGT01030000234667.a.a.a.b ENSGT00390000017582 ENSGT00940000160450 ENSGT00940000155519 ENSGT00390000011422 ENSGT00390000016224.j.a ENSGT01030000235108 ENSGT00940000160525 ENSGT00390000010145.c.b ENSGT00940000156421 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.b.a.b.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a ENSGT00940000161526.a ENSGT00940000161526.b.j.b Caprinae ANCESTRAL SPECIES 8 ENSGT00940000160993 ENSGT01030000234667.a.a.a.b ENSGT00390000017582 ENSGT00940000160450 ENSGT00940000155519 ENSGT00390000011422 ENSGT00390000016224.j.a ENSGT00940000160525 ENSGT00390000010145.c.b ENSGT00940000156421 ENSGT00500000044950 ENSGT00950000185720 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.b.b.b ENSGT00440000033232.c.b.b.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000158524.h ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT01030000238221 ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b ENSGT00960000187239 ENSGT00940000161526.b.j.a.a Rambouillet Sheep MODERN SPECIES ACKR4 (ENSOARG00020000542) DNAJC13 (ENSOARG00020000598) ACPP (ENSOARG00020001016) CPNE4 (ENSOARG00020001093) ENSOARG00020001145 MRPL3 (ENSOARG00020001178) NUDT16 (ENSOARG00020001207) NEK11 (ENSOARG00020001241) ASTE1 (ENSOARG00020001290) ATP2C1 (ENSOARG00020001400) ENSOARG00020002122 ENSOARG00020002138 PSMG1 (ENSOARG00020002147) BRWD1 (ENSOARG00020002189) ENSOARG00020002318 GET1 (ENSOARG00020002343) ##22 LCA5L (ENSOARG00020002371) SH3BGR (ENSOARG00020002389) B3GALT5 (ENSOARG00020002400) ENSOARG00020002404 PCP4 (ENSOARG00020002413) DSCAM (ENSOARG00020002425) ENSOARG00020002543 ENSOARG00020002557 BACE2 (ENSOARG00020002588) ENSOARG00020002630 MX2 (ENSOARG00020002675) ENSOARG00020002693 MX1 (ENSOARG00020002706) TMPRSS2 (ENSOARG00020002743) ENSOARG00020002760 Goat MODERN SPECIES DNAJC13 (ENSCHIG00000010645) ACP3 (ENSCHIG00000016695) ENSCHIG00000005044 ENSCHIG00000018608 MRPL3 (ENSCHIG00000024783) ENSCHIG00000015651 NUDT16 (ENSCHIG00000026305) NEK11 (ENSCHIG00000008883) ASTE1 (ENSCHIG00000021806) ATP2C1 (ENSCHIG00000015474) PSMG1 (ENSCHIG00000005726) ENSCHIG00000022501 BRWD1 (ENSCHIG00000013528) ENSCHIG00000008037 ENSCHIG00000000879 GET1 (ENSCHIG00000008859) ##22 LCA5L (ENSCHIG00000013759) SH3BGR (ENSCHIG00000018188) B3GALT5 (ENSCHIG00000003423) ENSCHIG00000010437 PCP4 (ENSCHIG00000026748) DSCAM (ENSCHIG00000010917) ENSCHIG00000025338 ENSCHIG00000015454 BACE2 (ENSCHIG00000019839) ENSCHIG00000016035 FAM3B (ENSCHIG00000017490) MX2 (ENSCHIG00000014150) MX1 (ENSCHIG00000001865) TMPRSS2 (ENSCHIG00000024477) ENSCHIG00000007612 Bovinae ANCESTRAL SPECIES 6 ENSGT00940000160993 ENSGT01030000234667.a.a.a.b ENSGT00390000017582 ENSGT00940000160450 ENSGT00940000155519 ENSGT00390000011422 ENSGT00390000016224.j.a ENSGT01030000235108 ENSGT00940000160525 ENSGT00390000010145.c.b ENSGT00940000156421 ENSGT00390000003718.d.sb.a ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.b.a.b.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a ENSGT00940000161526.a ENSGT00940000161526.b.j.b Bos ANCESTRAL SPECIES 7 ENSGT00390000017582 ENSGT00940000160450 ENSGT00940000155519 ENSGT00390000011666.h.a.a.b.a.a.a.a ENSGT00390000011422 ENSGT00390000016224.j.a ENSGT01030000235108 ENSGT00940000160525.h ENSGT00390000010145.c.b ENSGT00940000156421 ENSGT00390000003718.d.sb.a ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.bb ENSGT00950000182802.A.ab.b.a.b.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a ENSGT00940000161526.a ENSGT00940000161526.b.j.b Bos_b ANCESTRAL SPECIES 5 ENSGT00940000160993 ENSGT01030000234667.a.a.a.b ENSGT00390000017582 ENSGT00940000160450 ENSGT00940000155519 ENSGT00390000011666.h.a.a.b.a.a.a.a ENSGT00390000011422 ENSGT00390000016224.j.a ENSGT00940000160525.h ENSGT00390000010145.c.b ENSGT00940000156421 ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.bb ENSGT00390000011549.k.a ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT01030000238221 ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a ENSGT00940000161526.a ENSGT00940000161526.b.j.b Cow MODERN SPECIES ENSBTAG00000049430 ENSBTAG00000054913 ENSBTAG00000054550 CPNE4 (ENSBTAG00000010448) ENSBTAG00000053358 MRPL3 (ENSBTAG00000030942) NUDT16 (ENSBTAG00000018749) NEK11 (ENSBTAG00000009258) ASTE1 (ENSBTAG00000007462) ATP2C1 (ENSBTAG00000011626) ENSBTAG00000050167 PSMG1 (ENSBTAG00000013600) BRWD1 (ENSBTAG00000013602) HMGN1 (ENSBTAG00000018768) ENSBTAG00000023106 GET1 (ENSBTAG00000013629) ##22 LCA5L (ENSBTAG00000030993) SH3BGR (ENSBTAG00000007068) B3GALT5 (ENSBTAG00000023407) IGSF5 (ENSBTAG00000002029) PCP4 (ENSBTAG00000051421) DSCAM (ENSBTAG00000004754) ENSBTAG00000054486 BACE2 (ENSBTAG00000000394) FAM3B (ENSBTAG00000030921) MX2 (ENSBTAG00000008471) MX1 (ENSBTAG00000030913) TMPRSS2 (ENSBTAG00000009132) ENSBTAG00000050235 ENSBTAG00000045771 ENSBTAG00000046015 Hybrid Bos Indicus MODERN SPECIES ACP3 (ENSBIXG00005024909) CPNE4 (ENSBIXG00005006175) ENSBIXG00005004151 MRPL3 (ENSBIXG00005024272) ENSBIXG00005007236 NUDT16 (ENSBIXG00005024166) NEK11 (ENSBIXG00005024096) ASTE1 (ENSBIXG00005023909) ATP2C1 (ENSBIXG00005023827) ENSBIXG00005023680 ENSBIXG00005023658 PSMG1 (ENSBIXG00005004043) BRWD1 (ENSBIXG00005023566) ENSBIXG00005023526 ENSBIXG00005023486 GET1 (ENSBIXG00005023381) ##22 LCA5L (ENSBIXG00005003991) SH3BGR (ENSBIXG00005023251) ENSBIXG00005023221 B3GALT5 (ENSBIXG00005023200) ENSBIXG00005023175 ENSBIXG00005005999 PCP4 (ENSBIXG00005003943) DSCAM (ENSBIXG00005007073) ENSBIXG00005003909 BACE2 (ENSBIXG00005022860) FAM3B (ENSBIXG00005022792) MX2 (ENSBIXG00005022650) MX1 (ENSBIXG00005022624) TMPRSS2 (ENSBIXG00005003825) ENSBIXG00005022425 Bos_a ANCESTRAL SPECIES 5 ENSGT00390000017582 ENSGT00940000160450 ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000155519 ENSGT00390000011666.h.a.a.b.a.a.a.a ENSGT00390000011422 ENSGT00390000016224.j.a ENSGT01030000235108 ENSGT00940000160525.h ENSGT00390000010145.c.b ENSGT00940000156421 ENSGT00390000003718.d.sb.a ENSGT00500000044950 ENSGT00950000183107.a.b.a ENSGT00950000182802.A.ab.b.a.b.b ENSGT00390000008610.a.b.a.a.b ##22 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00940000160964 ENSGT00940000163238 ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000163266 ENSGT00940000155686 ENSGT00940000155207.a.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a ENSGT00940000161526.a ENSGT00940000161526.b.j.b ENSGT00940000159908 Wild yak MODERN SPECIES 2272 ENSBMUG00000025414 ASTE1 (ENSBMUG00000025421) ATP2C1 (ENSBMUG00000025505) ENSBMUG00000025570 ENSBMUG00000025574 PSMG1 (ENSBMUG00000025581) BRWD1 (ENSBMUG00000025609) ENSBMUG00000025622 GET1 (ENSBMUG00000025636) ##22 LCA5L (ENSBMUG00000025646) SH3BGR (ENSBMUG00000025661) American bison MODERN SPECIES 2975 ENSBBBG00000002449 CPNE4 (ENSBBBG00000001799) MRPL3 (ENSBBBG00000012774) NUDT16 (ENSBBBG00000012784) NEK11 (ENSBBBG00000012886) ASTE1 (ENSBBBG00000012900) ATP2C1 (ENSBBBG00000013474) ENSBBBG00000013524 PSMG1 (ENSBBBG00000013540) ENSBBBG00000013544 BRWD1 (ENSBBBG00000013614) ENSBBBG00000013623 GET1 (ENSBBBG00000013645) ##22 LCA5L (ENSBBBG00000013656) SH3BGR (ENSBBBG00000013682) B3GALT5 (ENSBBBG00000013686) ENSBBBG00000013694 PCP4 (ENSBBBG00000001532) ENSBBBG00000001530 DSCAM (ENSBBBG00000001524) BACE2 (ENSBBBG00000013772) FAM3B (ENSBBBG00000009103) MX2 (ENSBBBG00000013811) MX1 (ENSBBBG00000013880) TMPRSS2 (ENSBBBG00000013909) ENSBBBG00000007548 RIPK4 (ENSBBBG00000013940) PRDM15 (ENSBBBG00000013969) Yarkand deer MODERN SPECIES 10 NPHP3 (ENSCHYG00000024745) UBA5 (ENSCHYG00000024785) ACAD11 (ENSCHYG00000024913) ACKR4 (ENSCHYG00000024979) DNAJC13 (ENSCHYG00000024993) ACP3 (ENSCHYG00000025072) CPNE4 (ENSCHYG00000025161) ENSCHYG00000025216 MRPL3 (ENSCHYG00000025232) NUDT16 (ENSCHYG00000025324) NEK11 (ENSCHYG00000025386) ASTE1 (ENSCHYG00000025620) ATP2C1 (ENSCHYG00000025704) BRWD1 (ENSCHYG00000026058) ENSCHYG00000026355 GET1 (ENSCHYG00000026385) ##22 LCA5L (ENSCHYG00000026397) SH3BGR (ENSCHYG00000026419) B3GALT5 (ENSCHYG00000026443) ENSCHYG00000026450 PCP4 (ENSCHYG00000026460) DSCAM (ENSCHYG00000026466) BACE2 (ENSCHYG00000026498) ENSCHYG00000026515 FAM3B (ENSCHYG00000026526) MX2 (ENSCHYG00000026550) MX1 (ENSCHYG00000026565) TMPRSS2 (ENSCHYG00000026573) ENSCHYG00000026581 ENSCHYG00000026585 ENSCHYG00000026590 Euteleostomi ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Osteoglossocephalai ANCESTRAL SPECIES 966 ENSGT00510000046732.A.c ENSGT00390000008610.a.b.b ##22 Clupeocephala ANCESTRAL SPECIES 244 ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00390000007237.s ENSGT00940000163093.b ENSGT00940000163093.a.a ENSGT00390000004396.g #7 ENSGT00940000165592.b ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00510000046732.A.c ENSGT00390000008610.a.b.b ##22 ENSGT00530000064411.b Euteleosteomorpha ANCESTRAL SPECIES 632 ENSGT00510000046732.A.c ENSGT00390000008610.a.b.b ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Ovalentaria ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Atherinomorphae ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 NAME_4 ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Mummichog MODERN SPECIES 2301 ENSFHEG00000022187 zgc:171927 (ENSFHEG00000022176) RPS3 (ENSFHEG00000022153) ##22 KCTD14 (ENSFHEG00000022125) ENSFHEG00000022108 INTS4 (ENSFHEG00000022099) ENSFHEG00000021974 aamdc (ENSFHEG00000021961) exosc5 (ENSFHEG00000021919) ENSFHEG00000021890 ppp1r13l (ENSFHEG00000021875) opa3 (ENSFHEG00000021858) ENSFHEG00000021851 rasgrp4 (ENSFHEG00000021830) ENSFHEG00000021738 LGALS4 (ENSFHEG00000021433) AXL (ENSFHEG00000021376) ENSFHEG00000021322 Aplocheiloidei ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Turquoise killifish MODERN SPECIES 1615 CLIP3 (ENSNFUG00015015962) dharma (ENSNFUG00015015929) ENSNFUG00015015918 WU (ENSNFUG00015015909) ENSNFUG00015015888 CAPNS2 (ENSNFUG00015015881) ENSNFUG00015015877 zgc:101731 (ENSNFUG00015015873) ENSNFUG00015015866 ENSNFUG00015015845 ENSNFUG00015015772 ENSNFUG00015015752 ENSNFUG00015015740 ENSNFUG00015015735 ENSNFUG00015015718 RPS3 (ENSNFUG00015015649) ##22 KCTD14 (ENSNFUG00015015594) INTS4 (ENSNFUG00015015090) AAMDC (ENSNFUG00015015062) exosc5 (ENSNFUG00015014923) TMEM91 (ENSNFUG00015014778) ppp1r13l (ENSNFUG00015014641) ENSNFUG00015014620 OPA3 (ENSNFUG00015014603) HNRNPUL1 (ENSNFUG00015013709) rasgrp4 (ENSNFUG00015013477) LGALS4 (ENSNFUG00015011928) AXL (ENSNFUG00015011765) ENSNFUG00015011736 cyp2y3 (ENSNFUG00015011488) ENSNFUG00015011346 Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 269 ENSGT00940000153972.A.a ENSGT00390000011958 ENSGT00390000010128.hb.a ENSGT00390000008610.a.b.b.a ##22 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 1212 ENSGT00390000013989.b.e ENSGT00390000005140.a.o.b ENSGT00510000046732.A.c.r ENSGT00390000008610.a.b.b.a.a.a ##22 Salmoninae_a ANCESTRAL SPECIES 4 ENSGT00940000162120.f.a.a ENSGT01030000234642.a.b.b.d.b.c.b.d ENSGT00940000173128.b ENSGT00950000182772.A.a.a.a.a.a ENSGT00950000182772.A.a.a.a.a.b.a.b ENSGT00940000159555.v.b.d.a.b ENSGT01030000234613.b.b.h.b ENSGT00950000182985.a.b.a.a ENSGT00940000164418.a.b.f ENSGT00940000155478.hb.b.a ENSGT00510000048626 ENSGT00940000155573.g.b.a ENSGT00390000013989.b.e ENSGT00390000005140.a.o.b ENSGT00510000046732.A.c.r ENSGT00390000008610.a.b.b.a.a.a ##22 ENSGT00530000064411.b.f ENSGT00940000156251.b.a ENSGT00940000155350.h.d ENSGT00940000156536.e.a.h ENSGT00390000009497.a.d ENSGT00940000156648.c.a.b ENSGT00390000015655.a.m.b ENSGT00940000159782.b.b ENSGT00940000155677.b.i.b ENSGT01090000260061.c.b.id.a ENSGT00820000127055.a.b.a ENSGT00940000154495.a.b.b ENSGT01010000222313.A.b.b.b.a.f ENSGT00940000155545.b.e ENSGT00950000183155.a.a.a.b.d Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00950000182772.A.a.a.a.a.a ENSGT00950000182772.A.a.a.a.a.b.a.b.b.b.a ENSGT00940000159555.v.b.d.a.b ENSGT01030000234613.b.b.h.b ENSGT00950000182985.a.b.a.a ENSGT00940000164418.a.b.f ENSGT00940000155478.hb.b.a ENSGT00510000048626 ENSGT00940000155573.g.b.a ENSGT00390000002548.i ENSGT00940000164977.a.b ENSGT01100000263504.a.b.a.a ENSGT00390000013989.b.e ENSGT00390000005140.a.o.b ENSGT00510000046732.A.c.r ENSGT00390000008610.a.b.b.a.a.a ##22 ENSGT00530000064411.b.f ENSGT00940000156251.b.a ENSGT00940000155350.h.d ENSGT00940000156536.e.a.h ENSGT00390000009497.a.d ENSGT00940000156648.c.a.b ENSGT00390000015655.a.m.b ENSGT00940000159782.b.b ENSGT00940000155677.b.i.b ENSGT00940000155677.b.j ENSGT01090000260061.c.b.id.a ENSGT00820000127055.a.b.a ENSGT00940000154495.a.b.b ENSGT01010000222313.A.b.b.b.a.f ENSGT00940000155545.b.e Rainbow trout MODERN SPECIES 1 ENSOMYG00000007158 ppp1r14aa (ENSOMYG00000061359) ENSOMYG00000006984 CKM (ENSOMYG00000007272) dlb (ENSOMYG00000006961) ENSOMYG00000006924 zgc:153990 (ENSOMYG00000006899) ENSOMYG00000006889 nova1 (ENSOMYG00000006831) ENSOMYG00000006535 ENSOMYG00000006507 ENSOMYG00000006490 ENSOMYG00000006448 ENSOMYG00000006287 ENSOMYG00000060501 ENSOMYG00000006097 ##22 ENSOMYG00000005978 ENSOMYG00000005939 ENSOMYG00000005887 ENSOMYG00000060615 GDPD4 (ENSOMYG00000005865) MYO7A (ENSOMYG00000004362) CAPN5 (ENSOMYG00000002761) ENSOMYG00000002671 elmod1 (ENSOMYG00000072212) ENSOMYG00000002427 gria4b (ENSOMYG00000002271) ENSOMYG00000001718 ENSOMYG00000001569 ENSOMYG00000034951 ENSOMYG00000034898 Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00950000182772.A.a.a.a.a.a ENSGT00950000182772.A.a.a.a.a.b.a.b.b.b.a ENSGT00940000159555.v.b.d.a.b ENSGT01030000234613.b.b.h.b ENSGT00950000182985.a.b.a.a ENSGT00940000164418.a.b.f ENSGT00940000155478.hb.b.a ENSGT00510000048626 ENSGT00940000155573.g.b.a ENSGT00390000002548.i ENSGT00940000164977.a.b ENSGT01100000263504.a.b.a.a ENSGT00390000013989.b.e ENSGT00390000005140.a.o.b ENSGT00510000046732.A.c.r ENSGT00390000008610.a.b.b.a.a.a ##22 ENSGT00530000064411.b.f ENSGT00940000156251.b.a ENSGT00940000155350.h.d ENSGT00940000156536.e.a.h ENSGT00390000009497.a.d ENSGT00940000156648.c.a.b ENSGT00390000015655.a.m.b ENSGT00940000159782.b.b ENSGT00940000155677.b.j ENSGT01090000260061.c.b.id.a ENSGT00820000127055.a.b.a ENSGT00940000154495.a.b.b ENSGT01010000222313.A.b.b.b.a.f ENSGT00940000155545.b.e ENSGT00950000183155.a.a.a.b.d Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 33 ENSOTSG00005025133 ckma (ENSOTSG00005025137) MARK4 (ENSOTSG00005001434) EXOC3L2 (ENSOTSG00005001493) ppp1r14aa (ENSOTSG00005001495) dlb (ENSOTSG00005001497) ENSOTSG00005001499 alkbh6 (ENSOTSG00005001500) NOVA2 (ENSOTSG00005001501) ENSOTSG00005001503 crx (ENSOTSG00005001504) ENSOTSG00005001505 fam168a (ENSOTSG00005001507) plekhb1 (ENSOTSG00005001508) FCHSD2 (ENSOTSG00005001514) ENSOTSG00005001704 ##22 ENSOTSG00005001718 GDPD4 (ENSOTSG00005001724) MYO7A (ENSOTSG00005001742) CAPN5 (ENSOTSG00005001813) ompb (ENSOTSG00005001870) CUL5 (ENSOTSG00005001918) slc35f2 (ENSOTSG00005004761) gria4b (ENSOTSG00005004839) ENSOTSG00005010595 ENSOTSG00005010596 CRK (ENSOTSG00005010597) ENSOTSG00005010598 ENSOTSG00005010599 USP2 (ENSOTSG00005010605) TECTA (ENSOTSG00005011743) Chinook salmon MODERN SPECIES 33 ENSOTSG00005044875 ckma (ENSOTSG00005044876) MARK4 (ENSOTSG00005044877) EXOC3L2 (ENSOTSG00005044878) ppp1r14aa (ENSOTSG00005044879) dlb (ENSOTSG00005044880) ENSOTSG00005044881 alkbh6 (ENSOTSG00005044882) nova1 (ENSOTSG00005044883) ENSOTSG00005044884 crx (ENSOTSG00005044885) ENSOTSG00005044886 plekhb1 (ENSOTSG00005044887) fam168a (ENSOTSG00005044888) FCHSD2 (ENSOTSG00005044891) ENSOTSG00005044899 ##22 ENSOTSG00005044901 GDPD4 (ENSOTSG00005044903) MYO7A (ENSOTSG00005044905) CAPN5 (ENSOTSG00005044907) ompb (ENSOTSG00005044916) CUL5 (ENSOTSG00005044924) slc35f2 (ENSOTSG00005044958) gria4b (ENSOTSG00005044976) ENSOTSG00005046425 ENSOTSG00005046426 ENSOTSG00005046427 ENSOTSG00005046428 USP2 (ENSOTSG00005046429) TECTA (ENSOTSG00005046465) TBCEL (ENSOTSG00005046466) Coho salmon DUPLICATION Coho salmon MODERN SPECIES 20 ENSOKIG00005046943 EXOC3L2 (ENSOKIG00005046973) ENSOKIG00005046979 ppp1r14aa (ENSOKIG00005046985) dlb (ENSOKIG00005047008) ENSOKIG00005047015 ENSOKIG00005047019 zgc:153990 (ENSOKIG00005047028) ENSOKIG00005047032 nova1 (ENSOKIG00005047065) crx (ENSOKIG00005047252) ENSOKIG00005047257 plekhb1 (ENSOKIG00005047266) ENSOKIG00005047283 FCHSD2 (ENSOKIG00005047308) ENSOKIG00005047358 ##22 ENSOKIG00005047410 ENSOKIG00005047419 ENSOKIG00005047437 GDPD4 (ENSOKIG00005047456) MYO7A (ENSOKIG00005047699) CAPN5 (ENSOKIG00005048805) CUL5 (ENSOKIG00005020220) elmod1 (ENSOKIG00005020974) gria4b (ENSOKIG00005021164) ENSOKIG00005023153 ENSOKIG00005023163 CRK (ENSOKIG00005023227) LRRC75A (ENSOKIG00005023242) POLDIP2 (ENSOKIG00005023285) ENSOKIG00005023343 Coho salmon MODERN SPECIES 26 ckma (ENSOKIG00005005200) ckma (ENSOKIG00005005219) MARK4 (ENSOKIG00005005256) ENSOKIG00005005534 ppp1r14aa (ENSOKIG00005005564) dlb (ENSOKIG00005005580) ENSOKIG00005005601 alkbh6 (ENSOKIG00005005610) nova1 (ENSOKIG00005005620) ENSOKIG00005005637 ENSOKIG00005005642 ENSOKIG00005005649 ENSOKIG00005005660 ENSOKIG00005005687 FCHSD2 (ENSOKIG00005005718) ENSOKIG00005005814 ##22 ENSOKIG00005005853 ENSOKIG00005005877 GDPD4 (ENSOKIG00005005929) MYO7A (ENSOKIG00005006047) CAPN5 (ENSOKIG00005006399) ompb (ENSOKIG00005006540) CUL5 (ENSOKIG00005006577) slc35f2 (ENSOKIG00005006717) elmod1 (ENSOKIG00005006729) gria4b (ENSOKIG00005006992) ywhae2 (ENSOKIG00005009953) CRK (ENSOKIG00005009974) ENSOKIG00005009989 ENSOKIG00005009997 ENSOKIG00005010006 Salmo ANCESTRAL SPECIES 44 ENSGT01030000234642.a.b.b.d.b.c.b.d ENSGT00910000144115.b.dc.a.a ENSGT00950000182772.A.a.a.a.a.a ENSGT00940000159555.v.b.d.a.b ENSGT01030000234613.b.b.h.b ENSGT00950000182985.a.b.a.a ENSGT00940000164418.a.b.f ENSGT00940000155478.hb.b.a ENSGT00510000048626 ENSGT00940000155573.g.b.a ENSGT00390000002548.i ENSGT00940000164977.a.b ENSGT00390000013989.b.e ENSGT00390000005140.a.o.b ENSGT00510000046732.A.c.r ENSGT00390000008610.a.b.b.a.a.a ##22 ENSGT00530000064411.b.f ENSGT00940000156251.b.a ENSGT00940000155350.h.d ENSGT00390000009497.a.d ENSGT00940000156536.e.a.h ENSGT00940000156648.c.a.b ENSGT00390000015655.a.m.b ENSGT00940000159782.b.b ENSGT00940000155677.b.i.b ENSGT01090000260061.c.b.id.a ENSGT00820000127055.a.b.a ENSGT00940000154495.a.b.b ENSGT01010000222313.A.b.b.b.a.f ENSGT00940000155545.b.e ENSGT00950000183155.a.a.a.b.d River trout MODERN SPECIES 6 ENSSTUG00000011838 ckma (ENSSTUG00000011828) MARK4 (ENSSTUG00000011588) EXOC3L2 (ENSSTUG00000011550) ppp1r14aa (ENSSTUG00000011543) dlb (ENSSTUG00000011524) ENSSTUG00000011497 alkbh6 (ENSSTUG00000011492) nova1 (ENSSTUG00000011443) ENSSTUG00000011430 crx (ENSSTUG00000011422) ENSSTUG00000011409 plekhb1 (ENSSTUG00000011405) fam168a (ENSSTUG00000011347) FCHSD2 (ENSSTUG00000011322) ENSSTUG00000011270 ##22 ENSSTUG00000011254 ENSSTUG00000011237 ompb (ENSSTUG00000011199) CAPN5 (ENSSTUG00000011086) CUL5 (ENSSTUG00000010323) slc35f2 (ENSSTUG00000010209) elmod1 (ENSSTUG00000010184) gria4b (ENSSTUG00000010114) ENSSTUG00000010083 CRK (ENSSTUG00000010068) ENSSTUG00000010061 ENSSTUG00000010056 ENSSTUG00000009880 TECTA (ENSSTUG00000009831) TBCEL (ENSSTUG00000009796) Salmoninae ANCESTRAL SPECIES 35 ENSGT00940000161313 ENSGT00940000159555.v.b.d.b ENSGT01030000234613.b.b.h.a ENSGT00950000182985.a.b.a.b ENSGT00940000164418.a.b.e ENSGT00940000166947 ENSGT00450000040324.a.a.a ENSGT00940000155478.hb.b.b ENSGT00940000155573.g.b.b ENSGT00390000002548 ENSGT00940000164977.a.a ENSGT01100000263504.a.a.ob.a ENSGT00390000013989.b.f ENSGT00390000005140.a.o.a ENSGT00510000046732.A.c.q ENSGT00390000008610.a.b.b.a.a.b ##22 ENSGT00530000064411.b.e ENSGT00390000010063.pb ENSGT00530000063816.c.a ENSGT00940000156251.b.b ENSGT00940000155350.h.c ENSGT00390000009497.a.c ENSGT00940000156536.e.a.g ENSGT00940000156648.c.a.a ENSGT00940000159782.b.a ENSGT00940000155677.b.i.a ENSGT01090000260061.c.b.id.b ENSGT00820000127055.a.b.b ENSGT00940000161370.b ENSGT00940000153571.a.h ENSGT00940000154495.a.b.a Huchen DUPLICATION Huchen MODERN SPECIES 1735 ENSHHUG00000043374 zgc:153990 (ENSHHUG00000043371) ENSHHUG00000043359 nova1 (ENSHHUG00000043346) kptn (ENSHHUG00000043330) crx (ENSHHUG00000043329) ENSHHUG00000043295 plekhb1 (ENSHHUG00000043287) fam168a (ENSHHUG00000043281) FCHSD2 (ENSHHUG00000043262) ENSHHUG00000043223 ##22 ENSHHUG00000043216 ENSHHUG00000043207 Huchen MODERN SPECIES 565 ENSHHUG00000026877 ENSHHUG00000026862 alkbh6 (ENSHHUG00000026852) nova1 (ENSHHUG00000026846) ENSHHUG00000026844 crx (ENSHHUG00000026843) ENSHHUG00000026834 plekhb1 (ENSHHUG00000026828) fam168a (ENSHHUG00000026819) FCHSD2 (ENSHHUG00000026795) ENSHHUG00000026726 ##22 ENSHHUG00000026707 ENSHHUG00000026701 ENSHHUG00000026679 ENSHHUG00000026675 MYO7A (ENSHHUG00000026585) ompb (ENSHHUG00000026578) CAPN5 (ENSHHUG00000026538) CUL5 (ENSHHUG00000026505) slc35f2 (ENSHHUG00000026500) Salmoninae_a ANCESTRAL SPECIES 44 ENSGT00940000161313 ENSGT00950000182772.A.a.a.a.a.b.a.a ENSGT00940000159555.v.b.d.a.a ENSGT01030000234613.b.b.h.a ENSGT00950000182985.a.b.a.b ENSGT00940000164418.a.b.e ENSGT00940000166947 ENSGT00450000040324.a.a.a ENSGT00940000155478.hb.b.b ENSGT00940000155573.g.b.b ENSGT00390000002548.j ENSGT00940000164977.a.a ENSGT00390000013989.b.f ENSGT00390000005140.a.o.a ENSGT00510000046732.A.c.q ENSGT00390000008610.a.b.b.a.a.b ##22 ENSGT00530000064411.b.e ENSGT00390000010063.pb ENSGT00530000063816.c.a ENSGT00940000156251.b.b ENSGT00940000155350.h.c ENSGT00390000009497.a.c ENSGT00940000156536.e.a.g ENSGT00940000156648.c.a.a ENSGT00940000159782.b.a ENSGT00940000155677.b.i.a ENSGT01090000260061.c.b.id.b ENSGT00820000127055.a.b.b ENSGT00940000161370.b ENSGT00940000153571.a.h ENSGT00940000154495.a.b.a Oncorhynchus ANCESTRAL SPECIES 41 ENSGT00950000182772.A.a.a.a.a.b.a.a ENSGT00940000159555.v.b.d.a.a ENSGT00940000159555.v.b.d.b ENSGT01030000234613.b.b.h.a ENSGT00950000182985.a.b.a.b ENSGT00940000164418.a.b.e ENSGT00940000166947 ENSGT00450000040324.a.a.a ENSGT00940000155478.hb.b.b ENSGT00940000155573.g.b.b ENSGT00390000002548.j ENSGT00940000164977.a.a ENSGT00390000013989.b.f ENSGT00390000005140.a.o.a ENSGT00510000046732.A.c.q ENSGT00390000008610.a.b.b.a.a.b ##22 ENSGT00530000064411.b.e ENSGT00390000010063.pb.a ENSGT00530000063816.c.a ENSGT00940000156251.b.b ENSGT00940000155350.h.c ENSGT00940000156536.e.a.g ENSGT00940000156648.c.a.a ENSGT00940000159782.b.a ENSGT00940000155677.b.i.a ENSGT01090000260061.c.b.id.b ENSGT00820000127055.a.b.b ENSGT00940000161370.b ENSGT00940000153571.a.h ENSGT00940000154495.a.b.a ENSGT01010000222313.A.b.b.b.a.e Oncorhynchus_a ANCESTRAL SPECIES 43 ENSGT00940000161313 ENSGT00950000182772.A.a.a.a.a.b.a.a ENSGT00940000159555.v.b.d.a.a ENSGT01030000234613.b.b.h.a ENSGT00950000182985.a.b.a.b ENSGT00940000164418.a.b.e ENSGT00940000166947 ENSGT00450000040324.a.a.a ENSGT00940000155478.hb.b.b ENSGT00940000155573.g.b.b ENSGT00390000002548.j ENSGT00940000164977.a.a ENSGT00390000013989.b.f ENSGT00390000005140.a.o.a ENSGT00510000046732.A.c.q ENSGT00390000008610.a.b.b.a.a.b ##22 ENSGT00530000064411.b.e ENSGT00390000010063.pb.a ENSGT00530000063816.c.a ENSGT00940000156251.b.b ENSGT00940000155350.h.c ENSGT00940000156536.e.a.g ENSGT00940000156648.c.a.a ENSGT00940000159782.b.a ENSGT00940000155677.b.i.a ENSGT01090000260061.c.b.id.b ENSGT00820000127055.a.b.b ENSGT00940000161370.b ENSGT00940000153571.a.h ENSGT00940000154495.a.b.a ENSGT01010000222313.A.b.b.b.a.e Chinook salmon MODERN SPECIES 23 MARK4 (ENSOTSG00005038659) ENSOTSG00005038657 EXOC3L2 (ENSOTSG00005038655) ppp1r14aa (ENSOTSG00005038653) dlb (ENSOTSG00005038647) ENSOTSG00005038643 zgc:153990 (ENSOTSG00005038641) ENSOTSG00005038639 nova1 (ENSOTSG00005038637) crx (ENSOTSG00005038635) kptn (ENSOTSG00005038591) ENSOTSG00005038582 plekhb1 (ENSOTSG00005038581) fam168a (ENSOTSG00005038579) FCHSD2 (ENSOTSG00005038485) ENSOTSG00005038482 ##22 ENSOTSG00005038476 ENSOTSG00005038474 ENSOTSG00005038473 GDPD4 (ENSOTSG00005038471) MYO7A (ENSOTSG00005038307) ENSOTSG00005038291 CAPN5 (ENSOTSG00005038217) CUL5 (ENSOTSG00005038212) elmod1 (ENSOTSG00005038210) gria4b (ENSOTSG00005036677) ywhae2 (ENSOTSG00005036653) ENSOTSG00005036649 LRRC75A (ENSOTSG00005036645) ENSOTSG00005036641 ENSOTSG00005036639 Salmo ANCESTRAL SPECIES 17 ENSGT00940000159555.v.b.d.a.a ENSGT01030000234613.b.b.h.a ENSGT00950000182985.a.b.a.b ENSGT00940000164418.a.b.e ENSGT00940000166947 ENSGT00450000040324.a.a.a ENSGT00940000155478.hb.b.b ENSGT00990000213120 ENSGT00940000155573.g.b.b ENSGT00390000002548.j ENSGT00940000164977.a.a ENSGT01100000263504.a.b.b.a.b.tb ENSGT00390000013989.b.f ENSGT00390000005140.a.o.a ENSGT00510000046732.A.c.q ENSGT00390000008610.a.b.b.a.a.b ##22 ENSGT00530000064411.b.e ENSGT00390000010063.pb ENSGT00530000063816.c.a ENSGT00940000156251.b.b ENSGT00940000155350.h.c ENSGT00390000009497.a.c ENSGT00940000156536.e.a.g ENSGT00940000156648.c.a.a ENSGT00940000159782.b.a ENSGT00940000155677.b.i.a ENSGT01090000260061.c.b.id.b ENSGT00820000127055.a.b.b ENSGT00940000153571.a.h ENSGT00940000154495.a.b.a ENSGT01010000222313.A.b.b.b.a.e River trout MODERN SPECIES 10 EXOC3L2 (ENSSTUG00000046759) ppp1r14aa (ENSSTUG00000046753) dlb (ENSSTUG00000046740) ENSSTUG00000046731 ENSSTUG00000046727 zgc:153990 (ENSSTUG00000046722) CAPNS1 (ENSSTUG00000046718) ENSSTUG00000046696 nova1 (ENSSTUG00000046672) kptn (ENSSTUG00000046541) crx (ENSSTUG00000046524) ENSSTUG00000046520 plekhb1 (ENSSTUG00000046511) fam168a (ENSSTUG00000046495) FCHSD2 (ENSSTUG00000046420) ENSSTUG00000046392 ##22 ENSSTUG00000046383 ENSSTUG00000046355 ENSSTUG00000046345 ENSSTUG00000046332 MYO7A (ENSSTUG00000044508) ompb (ENSSTUG00000044427) CAPN5 (ENSSTUG00000044359) CUL5 (ENSSTUG00000044214) elmod1 (ENSSTUG00000044172) gria4b (ENSSTUG00000043268) ywhae2 (ENSSTUG00000042940) ENSSTUG00000042909 POLDIP2 (ENSSTUG00000042758) ENSSTUG00000042615 ENSSTUG00000042599 Atlantic salmon MODERN SPECIES 23 ENSSSAG00000075935 ENSSSAG00000075971 ppp1r14aa (ENSSSAG00000086720) dlb (ENSSSAG00000063795) ENSSSAG00000075989 zgc:153990 (ENSSSAG00000108819) ENSSSAG00000075994 nova1 (ENSSSAG00000076005) ENSSSAG00000075999 ENSSSAG00000076024 ENSSSAG00000101243 h3f3a (ENSSSAG00000076232) fam168a (ENSSSAG00000000571) ENSSSAG00000107897 ENSSSAG00000000620 ENSSSAG00000000673 ##22 ENSSSAG00000118846 ENSSSAG00000099308 ENSSSAG00000000693 GDPD4 (ENSSSAG00000000716) ENSSSAG00000117321 MYO7A (ENSSSAG00000000855) CAPN5 (ENSSSAG00000119704) ompb (ENSSSAG00000001217) ENSSSAG00000116155 ENSSSAG00000001489 ENSSSAG00000108261 gria4b (ENSSSAG00000104085) ENSSSAG00000095358 ENSSSAG00000105016 ENSSSAG00000080079 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 117 ENSGT00390000010128.hb.a ENSGT00390000008610.a.b.b.a.b.a ##22 ENSGT00940000160762 ENSGT00950000183023.B.h.b.a ENSGT00950000183048.b.b.a.b.b ENSGT00950000183023.B.h.a.a.b ENSGT00950000183048.b.b.a.a.b.a ENSGT00950000183048.b.b.a.b.a.b ENSGT00940000167612 ENSGT00950000183048.b.b.a.a.b.b ENSGT01000000215183.b ENSGT00940000162428.k ENSGT00940000166839.h ENSGT01050000244808.D.c.b ENSGT00940000155435.A.a.b ENSGT00390000002766.b.a.l ENSGT00390000005104.c Salmoninae_a ANCESTRAL SPECIES 210 ENSGT00950000183061.a.b.a.a.c ENSGT01050000244827.C.c.a.b.f ENSGT00940000154934.B.gb.a ENSGT00940000154956.sb.a.d ENSGT00390000012235.k.f ENSGT00940000153972.A.a.g.a ENSGT00390000011958.w ENSGT00390000010128.hb.a ENSGT00390000008610.a.b.b.a.b.a ##22 Oncorhynchus ANCESTRAL SPECIES 14 ENSGT00530000064411.a.d ENSGT00390000010063.ob.b ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a.k ENSGT00940000156251.a.k.b ENSGT00390000009497.b.c ENSGT00940000156536.e.b.a ENSGT00940000156155.l ENSGT00940000156648.c.b.a ENSGT00390000015655.a.m.a.e ENSGT00940000158415 ENSGT00530000063882.b.lb.b ENSGT00940000171017.c ENSGT00940000165563.b ENSGT00940000167717 ENSGT00390000008610.a.b.b.a.b.a ##22 ENSGT00940000160762 ENSGT00950000183023.B.h.b.a ENSGT00950000183048.b.b.a.b.a.b.b.a ENSGT00950000183023.B.h.a.a.b ENSGT00950000183048.b.b.a.a.b.a ENSGT00950000183048.b.b.a.b.b.a.a ENSGT00950000183023.B.h.b.b ENSGT00950000183048.b.b.a.b.a.b.b.b.d.b ENSGT00950000183048.b.b.a.b.a.b.b.b.d.a ENSGT00940000162428.k ENSGT00940000166839.h ENSGT01050000244808.D.c.b ENSGT00940000155435.A.a.b ENSGT00390000002766.b.a.l ENSGT00390000005104.c Rainbow trout MODERN SPECIES 16 ENSOMYG00000019903 ENSOMYG00000019900 ENSOMYG00000019895 ENSOMYG00000019890 ENSOMYG00000060110 ENSOMYG00000019793 ENSOMYG00000075222 ENSOMYG00000070965 mab21l1 (ENSOMYG00000019755) NBEA (ENSOMYG00000019405) dclk1b (ENSOMYG00000019231) spartb (ENSOMYG00000019173) ENSOMYG00000043782 ENSOMYG00000043778 ENSOMYG00000043764 ENSOMYG00000043722 ##22 ENSOMYG00000043705 ENSOMYG00000043691 ENSOMYG00000073965 ENSOMYG00000043683 ENSOMYG00000043681 ENSOMYG00000043679 ENSOMYG00000043675 ENSOMYG00000060384 ENSOMYG00000056585 ENSOMYG00000052143 ENSOMYG00000062645 ENSOMYG00000043669 ENSOMYG00000059804 ENSOMYG00000043660 ENSOMYG00000043685 Oncorhynchus_a ANCESTRAL SPECIES 32 ENSGT00530000064411.a.d ENSGT00390000010063.ob.b ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a.k ENSGT00940000156251.a.k.b ENSGT00390000009497.b.c ENSGT00940000156536.e.b.a ENSGT00940000156155.l ENSGT00940000156648.c.b.a ENSGT00390000015655.a.m.a.e ENSGT00940000158415 ENSGT00530000063882.b.lb.b ENSGT00940000171017.c ENSGT00940000165563.b ENSGT00940000167717 ENSGT00390000008610.a.b.b.a.b.a ##22 ENSGT00940000160762 ENSGT00950000183023.B.h.b.a ENSGT00950000183048.b.b.a.b.b.a.a ENSGT00950000183023.B.h.a.a.b ENSGT00950000183048.b.b.a.a.b.a.d ENSGT00950000183048.b.b.a.b.a.b.a ENSGT00940000167612 ENSGT00950000183048.b.b.a.b.a.b.b.a ENSGT01100000267140 ENSGT00950000183048.b.b.a.a.b.b.a.a ENSGT01000000215183.b ENSGT00950000183023.B.h.b.b ENSGT00950000183048.b.b.a.b.a.b.b.b.d.b ENSGT00950000183048.b.b.a.b.a.b.b.b.d.a ENSGT00940000162428.k Chinook salmon MODERN SPECIES 5 ENSOTSG00005030737 PHLDB1 (ENSOTSG00005030750) MFSD1 (ENSOTSG00005032011) ENSOTSG00005032896 ENSOTSG00005032897 ENSOTSG00005032899 ENSOTSG00005032903 NBEA (ENSOTSG00005032980) mab21l1 (ENSOTSG00005033661) dclk1b (ENSOTSG00005033667) spartb (ENSOTSG00005035484) PANX1 (ENSOTSG00005035487) aamdc (ENSOTSG00005035491) INTS4 (ENSOTSG00005035495) ENSOTSG00005035498 ENSOTSG00005035499 ##22 KCTD14 (ENSOTSG00005035510) ENSOTSG00005035511 ENSOTSG00005035512 ENSOTSG00005035513 ENSOTSG00005035515 ENSOTSG00005035518 ENSOTSG00005035520 ENSOTSG00005035522 ENSOTSG00005035525 ENSOTSG00005035526 ENSOTSG00005035535 ENSOTSG00005035538 ENSOTSG00005035540 ENSOTSG00005035542 ENSOTSG00005035543 Coho salmon MODERN SPECIES 9 SLC35F2 (ENSOKIG00005020003) KBTBD3 (ENSOKIG00005020046) ENSOKIG00005020127 ENSOKIG00005031013 ENSOKIG00005031028 ENSOKIG00005031048 ENSOKIG00005031158 ENSOKIG00005031617 NBEA (ENSOKIG00005032089) mab21l1 (ENSOKIG00005038234) dclk1b (ENSOKIG00005038295) spartb (ENSOKIG00005039093) panx1a (ENSOKIG00005039130) aamdc (ENSOKIG00005039198) INTS4 (ENSOKIG00005039303) ENSOKIG00005040949 ##22 KCTD14 (ENSOKIG00005041028) ENSOKIG00005041045 ENSOKIG00005041066 ENSOKIG00005041075 ENSOKIG00005041094 ENSOKIG00005041140 ENSOKIG00005041164 kpna4 (ENSOKIG00005041251) nmd3 (ENSOKIG00005041977) otol1b (ENSOKIG00005042067) ENSOKIG00005042094 ENSOKIG00005042155 rabgef1l (ENSOKIG00005042280) ENSOKIG00005042317 ENSOKIG00005042331 Salmo ANCESTRAL SPECIES 22 ENSGT00940000156648.c.b.a ENSGT00390000015655.a.m.a.e ENSGT00940000158415 ENSGT00530000063882.b.lb.b ENSGT00940000171017.c ENSGT00940000165563.b ENSGT00390000004912.b.b ENSGT00950000183061.a.b.a.a.c ENSGT01050000244827.C.c.a.b.f ENSGT00940000154934.B.gb.a ENSGT00940000154956.sb.a.d ENSGT00390000012235.k.f ENSGT00940000153972.A.a.g.a ENSGT00390000011958.w ENSGT00390000010128.hb.a ENSGT00390000008610.a.b.b.a.b.a ##22 ENSGT00940000160762 ENSGT00950000183023.B.h.b.a ENSGT00950000183023.B.h.a.a.b ENSGT00950000183048.b.b.a.b.a.a.b ENSGT00940000167612.j.b ENSGT00950000183048.b.b.a.a.b.a ENSGT00950000183048.b.b.a.b.b.a.a ENSGT00940000167612.j.a ENSGT00940000167612.i ENSGT00950000183048.b.b.a.b.b.a.b ENSGT00950000183048.b.b.a.a.b.b ENSGT01000000215183.b ENSGT00950000183048.b.b.a.b.a.b.b.b ENSGT00940000162428.k ENSGT00940000166839.h Atlantic salmon MODERN SPECIES 28 ENSSSAG00000098691 kbtbd3 (ENSSSAG00000038039) ENSSSAG00000116236 ENSSSAG00000075712 dus14 (ENSSSAG00000114256) ENSSSAG00000075709 ENSSSAG00000074842 mab21l1 (ENSSSAG00000074770) NBEA (ENSSSAG00000068625) dclk1b (ENSSSAG00000066796) spartb (ENSSSAG00000066718) ENSSSAG00000110205 ENSSSAG00000090011 ENSSSAG00000078760 ints4 (ENSSSAG00000066652) ENSSSAG00000082968 ##22 ENSSSAG00000089926 ENSSSAG00000066615 ENSSSAG00000103646 ENSSSAG00000081848 ENSSSAG00000116861 ENSSSAG00000089651 ENSSSAG00000100872 ENSSSAG00000084799 ENSSSAG00000066587 ENSSSAG00000085088 ENSSSAG00000066579 ENSSSAG00000112752 ENSSSAG00000066547 ENSSSAG00000066544 ENSSSAG00000066540 Huchen MODERN SPECIES 534 NBEA (ENSHHUG00000043606) mab21l1 (ENSHHUG00000043693) dclk1b (ENSHHUG00000043710) dclk1b (ENSHHUG00000043761) spartb (ENSHHUG00000043763) panx1a (ENSHHUG00000043775) aamdc (ENSHHUG00000043776) INTS4 (ENSHHUG00000043780) ENSHHUG00000043848 ##22 KCTD14 (ENSHHUG00000043906) ENSHHUG00000043910 ENSHHUG00000043914 ENSHHUG00000043924 ENSHHUG00000043927 ENSHHUG00000043949 ENSHHUG00000043950 ENSHHUG00000043952 ENSHHUG00000043955 ENSHHUG00000043957 ENSHHUG00000043963 ENSHHUG00000043969 ENSHHUG00000043974 ENSHHUG00000043977 otol1b (ENSHHUG00000043982) Salmoninae ANCESTRAL SPECIES 339 ENSGT00950000183061.a.b.a.a.c ENSGT01050000244827.C.c.a.b.f ENSGT00940000154934.B.gb.a ENSGT00940000154956.sb.a.d ENSGT00390000012235.k.f ENSGT00940000153972.A.a.g.a ENSGT00390000011958 ENSGT00390000010128.hb.b ENSGT00390000008610.a.b.b.a.b.b ##22 ENSGT00940000162428.l ENSGT01000000215183.a ENSGT00940000166839.g ENSGT01050000244808.D.c.a ENSGT00940000155435.A.a.a ENSGT00390000002766.b.a.k ENSGT00390000005104.d ENSGT00940000157030.c.b.a ENSGT00940000165275.B ENSGT01050000244891.C.c.a.l ENSGT00940000165917.i ENSGT00900000141094.x ENSGT00440000033499 ENSGT01000000215257.b ENSGT00650000094113.d Salmoninae_a ANCESTRAL SPECIES 19 ENSGT00940000156155.k ENSGT00940000156648.c.b.b ENSGT00390000015655.a.m.a.f ENSGT00530000063882.b.lb.a ENSGT00940000171017.d ENSGT00390000004912.b.a.a ENSGT00940000157403 ENSGT00950000183061.a.b.a.a.d ENSGT01050000244827.C.c.a.b.e ENSGT00940000154934.B.gb.b ENSGT00940000154956.sb.a.c ENSGT00390000012235.k.e ENSGT00940000153972.A.a.g.b ENSGT00390000011958.x ENSGT00390000010128.hb.b ENSGT00390000008610.a.b.b.a.b.b ##22 ENSGT00950000183023.B.h.a.a.a.a.b.a.a.a.b ENSGT00950000183023.B.h.a.a.a.b.b.b ENSGT00950000183048.b.b.a.a.a.a ENSGT00940000162428.l ENSGT01000000215183.a ENSGT00940000166839.g ENSGT01050000244808.D.c.a ENSGT00940000155435.A.a.a ENSGT00390000002766.b.a.k ENSGT00390000005104.d ENSGT00940000157030.c.b.a ENSGT00940000165275.B ENSGT01050000244891.C.c.a.l ENSGT00940000165917.i ENSGT00900000141094.x Oncorhynchus ANCESTRAL SPECIES 24 ENSGT00940000156155.k ENSGT00940000156648.c.b.b ENSGT00390000015655.a.m.a.f ENSGT00530000063882.b.lb.a ENSGT00940000171017.d ENSGT00390000004912.b.a.a ENSGT00940000157403 ENSGT00950000183061.a.b.a.a.d ENSGT01050000244827.C.c.a.b.e ENSGT00940000154934.B.gb.b ENSGT00940000154956.sb.a.c ENSGT00390000012235.k.e ENSGT00940000153972.A.a.g.b ENSGT00390000011958.x ENSGT00390000010128.hb.b ENSGT00390000008610.a.b.b.a.b.b ##22 ENSGT00950000183023.B.h.a.a.a.a.b.a.a.a.b ENSGT00950000183023.B.h.a.a.a.a.b.a.b ENSGT00950000183023.B.h.a.a.a.a.a ENSGT00950000183023.B.h.a.a.a.b.a.a ENSGT00950000183023.B.h.a.a.a.a.b.b ENSGT00950000183023.B.h.a.a.a.a.b.a.a.a.a ENSGT00940000162428.l ENSGT01000000215183.a ENSGT00940000166839.g ENSGT01050000244808.D.c.a ENSGT00940000155435.A.a.a ENSGT00390000002766.b.a.k ENSGT00390000005104.d ENSGT00940000157030.c.b.a ENSGT00940000165275.B Oncorhynchus_a ANCESTRAL SPECIES 25 ENSGT00940000156155.k ENSGT00940000156648.c.b.b ENSGT00390000015655.a.m.a.f ENSGT00530000063882.b.lb.a ENSGT00940000171017.d ENSGT00390000004912.b.a.a ENSGT00940000157403 ENSGT00950000183061.a.b.a.a.d ENSGT01050000244827.C.c.a.b.e ENSGT00940000154934.B.gb.b ENSGT00940000154956.sb.a.c ENSGT00390000012235.k.e ENSGT00940000153972.A.a.g.b ENSGT00390000011958.x ENSGT00390000010128.hb.b ENSGT00390000008610.a.b.b.a.b.b ##22 ENSGT00950000183023.B.h.a.a.a.a.b.a.a.a.b ENSGT00950000183023.B.h.a.a.a.a.b.a.b ENSGT00950000183023.B.h.a.a.a.a.a ENSGT00950000183023.B.h.a.a.a.a.b.a.a.a.a.a ENSGT00950000183023.B.h.a.a.a.a.b.a.a.b ENSGT00950000183023.B.h.a.a.a.b.b.b ENSGT00950000183048.b.b.a.a.a.a.b ENSGT00950000183048.b.b.a.a.a.a.a ENSGT00940000162428.l ENSGT01000000215183.a ENSGT00940000166839.g ENSGT01050000244808.D.c.a ENSGT00940000155435.A.a.a ENSGT00390000002766.b.a.k ENSGT00390000005104.d Coho salmon MODERN SPECIES 6 dcun1d5 (ENSOKIG00005011439) CUL5 (ENSOKIG00005011208) SLC35F2 (ENSOKIG00005011190) ENSOKIG00005011186 ENSOKIG00005011177 polr2d (ENSOKIG00005011158) ilkap (ENSOKIG00005011123) ENSOKIG00005009205 mab21l1 (ENSOKIG00005009108) NBEA (ENSOKIG00005007425) dclk1b (ENSOKIG00005005078) ENSOKIG00005004944 spartb (ENSOKIG00005004934) PANX1 (ENSOKIG00005004906) AAMDC (ENSOKIG00005004883) ENSOKIG00005004770 ##22 ENSOKIG00005004759 ENSOKIG00005004752 ENSOKIG00005004744 ENSOKIG00005004735 ENSOKIG00005004727 ENSOKIG00005004719 ENSOKIG00005004711 ENSOKIG00005004704 ENSOKIG00005004701 ENSOKIG00005004694 ENSOKIG00005004688 ENSOKIG00005004685 ENSOKIG00005004679 ENSOKIG00005004675 ENSOKIG00005004668 Chinook salmon MODERN SPECIES 4 ENSOTSG00005014681 schip1 (ENSOTSG00005014686) il12a (ENSOTSG00005014689) ENSOTSG00005014692 ENSOTSG00005014693 ENSOTSG00005014694 NBEA (ENSOTSG00005014728) mab21l1 (ENSOTSG00005021334) dclk1b (ENSOTSG00005021671) spartb (ENSOTSG00005026126) PANX1 (ENSOTSG00005026128) aamdc (ENSOTSG00005026129) ENSOTSG00005026140 ENSOTSG00005026141 ENSOTSG00005026143 ENSOTSG00005026146 ##22 ENSOTSG00005026163 ENSOTSG00005026165 ENSOTSG00005026166 ENSOTSG00005026167 ENSOTSG00005026169 ENSOTSG00005026170 ENSOTSG00005026173 ENSOTSG00005026174 ENSOTSG00005026176 ENSOTSG00005026177 ENSOTSG00005001629 ENSOTSG00005001673 ENSOTSG00005001671 rabgef1l (ENSOTSG00005001803) ENSOTSG00005001808 Rainbow trout MODERN SPECIES 19 ENSOMYG00000042469 ENSOMYG00000042465 polr2d (ENSOMYG00000042459) ENSOMYG00000042444 ENSOMYG00000042126 ENSOMYG00000077816 ENSOMYG00000073399 mab21l1 (ENSOMYG00000042031) NBEA (ENSOMYG00000041356) dclk1b (ENSOMYG00000040049) spartb (ENSOMYG00000039898) ENSOMYG00000062743 ENSOMYG00000039885 ENSOMYG00000039882 ENSOMYG00000039871 ENSOMYG00000039839 ##22 ENSOMYG00000075542 ENSOMYG00000039801 ENSOMYG00000062572 ENSOMYG00000058947 ENSOMYG00000039755 ENSOMYG00000074229 ENSOMYG00000039745 ENSOMYG00000052712 ENSOMYG00000052087 ENSOMYG00000039700 ENSOMYG00000039696 ENSOMYG00000072240 ENSOMYG00000039164 ENSOMYG00000039048 ENSOMYG00000039041 Salmo ANCESTRAL SPECIES 7 ENSGT00940000156536.e.b.b ENSGT00940000156155.k ENSGT00940000156648.c.b.b ENSGT00390000015655.a.m.a.f ENSGT00530000063882.b.lb.a ENSGT00940000171017.d ENSGT00390000004912.b.a.a ENSGT00940000157403 ENSGT00950000183061.a.b.a.a.d ENSGT01050000244827.C.c.a.b.e ENSGT00940000154934.B.gb.b ENSGT00940000154956.sb.a.c ENSGT00390000012235.k.e ENSGT00940000153972.A.a.g.b ENSGT00390000011958.x ENSGT00390000008610.a.b.b.a.b.b ##22 ENSGT00950000183023.B.h.a.a.a.a.b.a.a.a.b ENSGT00950000183023.B.h.a.a.a.b.a.a.c ENSGT00950000183023.B.h.a.a.a.a.b.b ENSGT00950000183023.B.h.a.a.a.a.b.a.a.a.a.d ENSGT00950000183023.B.h.a.a.a.a.b.a.a.a.a.c ENSGT00950000183023.B.h.a.b ENSGT00950000183048.b.b.a.a.a.a ENSGT00950000183048.b.b.a.a.a.b ENSGT00940000166839.g ENSGT01050000244808.D.c.a ENSGT00940000155435.A.a.a ENSGT00390000002766.b.a.k ENSGT00390000005104.d ENSGT00940000157030.c.b.a ENSGT00940000165275.B Atlantic salmon MODERN SPECIES 12 ENSSSAG00000117320 ENSSSAG00000121618 ENSSSAG00000081719 ENSSSAG00000081718 rpb4 (ENSSSAG00000081717) ENSSSAG00000081716 ENSSSAG00000081711 mb211 (ENSSSAG00000071925) NBEA (ENSSSAG00000081530) dclk1b (ENSSSAG00000079468) spartb (ENSSSAG00000078813) ENSSSAG00000100221 ENSSSAG00000112032 ENSSSAG00000091433 ENSSSAG00000106817 ENSSSAG00000116103 ##22 ENSSSAG00000099961 ENSSSAG00000088239 ENSSSAG00000108877 ENSSSAG00000090281 ENSSSAG00000078525 ENSSSAG00000099214 ENSSSAG00000115455 ENSSSAG00000078483 ENSSSAG00000078459 otol1b (ENSSSAG00000078405) ENSSSAG00000111280 nmd3 (ENSSSAG00000078190) ENSSSAG00000104524 ENSSSAG00000121600 kpna4 (ENSSSAG00000076960) River trout MODERN SPECIES 18 CUL5 (ENSSTUG00000016392) SLC35F2 (ENSSTUG00000016359) ENSSTUG00000016351 ENSSTUG00000016348 polr2d (ENSSTUG00000016330) ilkap (ENSSTUG00000016314) ENSSTUG00000014386 mab21l1 (ENSSTUG00000014276) NBEA (ENSSTUG00000011067) dclk1b (ENSSTUG00000008691) spartb (ENSSTUG00000008614) PANX1 (ENSSTUG00000008607) aamdc (ENSSTUG00000008600) ENSSTUG00000008587 ENSSTUG00000008574 ENSSTUG00000008533 ##22 ENSSTUG00000008526 ENSSTUG00000008508 ENSSTUG00000008496 ENSSTUG00000008492 ENSSTUG00000008486 ENSSTUG00000008482 ENSSTUG00000008479 ENSSTUG00000008473 ENSSTUG00000008464 ENSSTUG00000008463 ENSSTUG00000008461 rabgef1l (ENSSTUG00000008442) ENSSTUG00000008409 otol1b (ENSSTUG00000008373) sptssb (ENSSTUG00000008362) Huchen MODERN SPECIES 559 ENSHHUG00000021099 dclk1b (ENSHHUG00000021124) DCLK1 (ENSHHUG00000021168) spartb (ENSHHUG00000021172) panx1a (ENSHHUG00000021175) ENSHHUG00000021188 ENSHHUG00000021221 ENSHHUG00000021232 ##22 ENSHHUG00000021317 ENSHHUG00000021331 ENSHHUG00000021345 ENSHHUG00000021357 ENSHHUG00000021366 ENSHHUG00000021409 ENSHHUG00000021413 ENSHHUG00000021414 ENSHHUG00000021421 ENSHHUG00000021548 ENSHHUG00000021557 ENSHHUG00000021560 ENSHHUG00000021564 ENSHHUG00000021566 rabgef1l (ENSHHUG00000021568) Northern pike MODERN SPECIES CUL5 (ENSELUG00000005991) SLC35F2 (ENSELUG00000000190) KBTBD3 (ENSELUG00000005963) ENSELUG00000005955 ENSELUG00000001203 ENSELUG00000000180 polr2d (ENSELUG00000034039) ilkap (ENSELUG00000005893) ENSELUG00000005854 NBEA (ENSELUG00000001037) mab21l1 (ENSELUG00000024617) dclk1b (ENSELUG00000024609) PANX1 (ENSELUG00000024477) aamdc (ENSELUG00000024452) INTS4 (ENSELUG00000024420) ENSELUG00000024369 ##22 kctd14 (ENSELUG00000024326) ENSELUG00000024270 ENSELUG00000033048 ENSELUG00000024239 ENSELUG00000024227 ENSELUG00000032679 ENSELUG00000032361 ENSELUG00000029592 ENSELUG00000024209 ENSELUG00000024200 rabgef1l (ENSELUG00000024184) ENSELUG00000001012 otol1b (ENSELUG00000001010) ENSELUG00000024137 sptssb (ENSELUG00000024127) Protacanthopterygii ANCESTRAL SPECIES 81 ENSGT00940000158344.a.b ENSGT00940000161313 ENSGT00940000159555.v.b.c ENSGT01030000234613.b.b.h ENSGT00950000182985.a.b.a ENSGT00940000164418.a.b ENSGT00940000166947 ENSGT00450000040324.a.a.a ENSGT00940000155478.hb.b ENSGT00510000048626 ENSGT00940000155573.g.b ENSGT00390000002548 ENSGT00940000164977.a ENSGT01100000263504.a.b.a.b.a.a ENSGT00510000046732.A.c ENSGT00390000008610.a.b.b.b ##22 ENSGT00530000064411.b ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00940000156155 ENSGT00940000156648.c.b ENSGT00390000015655.a.m.a ENSGT00940000158415 ENSGT00940000171017 ENSGT00940000165563.b ENSGT00390000004912 Salmoninae ANCESTRAL SPECIES 348 ENSGT00950000183079.A.b.c.b.c ENSGT00940000162120.f.a.a ENSGT01030000234642.a.b.b.d.b.c.b.d ENSGT00940000173128.b ENSGT00950000182772.A.a.a.a.a.a ENSGT00950000182772.A.a.a.a.a.b.a.b ENSGT00940000159555.v.b.d.a.b ENSGT01030000234613.b.b.h.b ENSGT00950000182985.a.b.a.a ENSGT00940000164418.a.b.f ENSGT00940000155478.hb.b.a ENSGT00510000048626 ENSGT00940000155573.g.b.a ENSGT00390000008610.a.b.b.b ##22 ENSGT00530000064411.b.f ENSGT00940000156251.b.a ENSGT00940000155350.h.d ENSGT00940000156536.e.a.h ENSGT00390000009497.a.d ENSGT00940000156648.c.a.b ENSGT00390000015655.a.m.b ENSGT00940000159782.b.b ENSGT00940000155677.b.i.b ENSGT00940000155677.b.j ENSGT01090000260061.c.b.id.a ENSGT00820000127055.a.b.a ENSGT00940000154495.a.b.b ENSGT01010000222313.A.b.b.b.a.f ENSGT00940000155545.b.e Salmoninae_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.b.b ##22 Salmo ANCESTRAL SPECIES ENSGT00390000008610.a.b.b.b ##22 Atlantic salmon MODERN SPECIES 4 ENSSSAG00000093155 ENSSSAG00000012320 ppp1r14aa (ENSSSAG00000089852) dlb (ENSSSAG00000075986) capns1a (ENSSSAG00000011852) alkbh6 (ENSSSAG00000011720) nova1 (ENSSSAG00000011478) ENSSSAG00000122286 ENSSSAG00000102383 ENSSSAG00000011401 h3f3a (ENSSSAG00000011330) ENSSSAG00000011266 ENSSSAG00000011048 ENSSSAG00000080466 ENSSSAG00000102749 ENSSSAG00000111902 ##22 ENSSSAG00000107926 ENSSSAG00000080449 ENSSSAG00000103892 ENSSSAG00000080446 MYO7A (ENSSSAG00000080375) ompb (ENSSSAG00000080367) ENSSSAG00000001142 ENSSSAG00000121221 slc35f2 (ENSSSAG00000080322) elmod1 (ENSSSAG00000080315) gria4b (ENSSSAG00000104016) ENSSSAG00000008422 ENSSSAG00000080076 ENSSSAG00000080074 ENSSSAG00000087040 Oncorhynchus ANCESTRAL SPECIES ENSGT00390000008610.a.b.b.b ##22 Rainbow trout MODERN SPECIES 3 ENSOMYG00000045153 ENSOMYG00000045193 ppp1r14aa (ENSOMYG00000077245) dlb (ENSOMYG00000064695) ENSOMYG00000045205 ENSOMYG00000065368 ENSOMYG00000069295 alkbh6 (ENSOMYG00000003168) nova1 (ENSOMYG00000003195) ENSOMYG00000003312 ENSOMYG00000070407 ENSOMYG00000058244 ENSOMYG00000077580 ENSOMYG00000003495 ENSOMYG00000003572 ENSOMYG00000003707 ##22 ENSOMYG00000003794 ENSOMYG00000003825 GDPD4 (ENSOMYG00000003888) ENSOMYG00000056202 MYO7A (ENSOMYG00000004675) ENSOMYG00000072789 CAPN5 (ENSOMYG00000005341) ompb (ENSOMYG00000005437) ENSOMYG00000005684 slc35f2 (ENSOMYG00000005785) ENSOMYG00000072496 elmod1 (ENSOMYG00000002471) gria4b (ENSOMYG00000008434) ENSOMYG00000013174 ENSOMYG00000066390 Northern pike MODERN SPECIES 6 EXOC3L2 (ENSELUG00000017170) ppp1r14aa (ENSELUG00000017185) dlb (ENSELUG00000017222) ENSELUG00000033905 ENSELUG00000017247 zgc:153990 (ENSELUG00000017267) capns1a (ENSELUG00000017326) alkbh6 (ENSELUG00000017352) nova1 (ENSELUG00000017375) kptn (ENSELUG00000017416) crx (ENSELUG00000017439) ENSELUG00000017446 ENSELUG00000025385 fam168a (ENSELUG00000000682) FCHSD2 (ENSELUG00000017539) ENSELUG00000017575 ##22 ENSELUG00000001307 ENSELUG00000033123 ENSELUG00000017721 ENSELUG00000017744 GDPD4 (ENSELUG00000017779) MYO7A (ENSELUG00000017865) CAPN5 (ENSELUG00000017917) ompb (ENSELUG00000017884) CUL5 (ENSELUG00000018014) slc35f2 (ENSELUG00000018044) elmod1 (ENSELUG00000018104) gria4b (ENSELUG00000018146) ENSELUG00000018168 CRK (ENSELUG00000018178) POLDIP2 (ENSELUG00000018214) Spotted gar MODERN SPECIES 669 ppme1 (ENSLOCG00000006074) #7 C2CD3 (ENSLOCG00000006088) ucp3 (ENSLOCG00000006121) ucp2 (ENSLOCG00000006138) dnajb13 (ENSLOCG00000006157) PAAF1 (ENSLOCG00000006175) mrpl48 (ENSLOCG00000006190) rab6a (ENSLOCG00000006205) plekhb1 (ENSLOCG00000006222) fam168a (ENSLOCG00000006237) relt (ENSLOCG00000006269) ARHGEF17 (ENSLOCG00000006306) P2RY2 (ENSLOCG00000018217) FCHSD2 (ENSLOCG00000006328) ENSLOCG00000006376 ENSLOCG00000006405 ##22 KCTD14 (ENSLOCG00000006426) INTS4 (ENSLOCG00000006446) aamdc (ENSLOCG00000006465) RSF1 (ENSLOCG00000006488) clns1a (ENSLOCG00000006519) aqp11 (ENSLOCG00000006538) pak1 (ENSLOCG00000006555) GDPD4 (ENSLOCG00000006596) myo7aa (ENSLOCG00000006622) CAPN5 (ENSLOCG00000006677) ompa (ENSLOCG00000018219) ENSLOCG00000006704 dcun1d5 (ENSLOCG00000006719) cul5a (ENSLOCG00000006732) ENSLOCG00000006748 Sarcopterygii ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Amniota ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Sauria ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Lepidosauria ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Episquamata ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Toxicofera ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Elapidae ANCESTRAL SPECIES 163 ENSGT00510000046732.A ENSGT00390000008610.a.b.b ##22 Elapidae_a ANCESTRAL SPECIES 322 ENSGT00510000046732.A ENSGT00390000008610.a.b.b ##22 Acanthophiinae ANCESTRAL SPECIES 214 ENSGT00510000046732.A ENSGT00390000008610.a.b.b ##22 ENSGT00940000156163.b #26 ENSGT00940000159690.d #25 Eastern brown snake MODERN SPECIES 164 FCHSD2 (ENSPTXG00000014840) ENSPTXG00000014842 ##22 ENSPTXG00000014847 #26 GDPD5 (ENSPTXG00000014850) #25 GDPD4 (ENSPTXG00000014891) MYO7A (ENSPTXG00000014904) CAPN5 (ENSPTXG00000014919) OMP (ENSPTXG00000014921) ENSPTXG00000014923 #36 TSKU (ENSPTXG00000014924) #35 ENSPTXG00000014935 ENSPTXG00000015422 Mainland tiger snake MODERN SPECIES 707 ENSNSUG00000017241 ##22 SERPINH1 (ENSNSUG00000017246) #26 Blue-lipped sea krait MODERN SPECIES 9152 ENSLLTG00000011119 ##22 SERPINH1 (ENSLLTG00000011161) #26 Mammalia ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Theria ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Eutheria ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Carnivora ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Caniformia ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Ursidae ANCESTRAL SPECIES ENSGT00390000008610.a.b.b ##22 Giant Panda MODERN SPECIES 1646 ENSAMEG00000028158 ##22 Euteleostomi ANCESTRAL SPECIES 189 ENSGT00390000004396 #7 ENSGT00510000048072 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00940000165320 ENSGT00390000008610.a.a ##22 Actinopterygii ANCESTRAL SPECIES 5 ENSGT00510000048072 ENSGT00940000165592 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000175310 ENSGT00530000064411 ENSGT00390000010063 ENSGT00530000063816.c ENSGT00950000182988.a.b.a ENSGT00940000156251 ENSGT00940000155350 ENSGT00940000156536.e.a ENSGT00390000009497 ENSGT00940000156155 ENSGT00940000156648 ENSGT00390000018904 Reedfish MODERN SPECIES 12 ENSECRG00000009697 mrpl48 (ENSECRG00000000998) rab6a (ENSECRG00000001041) plekhb1 (ENSECRG00000001108) fam168a (ENSECRG00000001220) relt (ENSECRG00000001268) ARHGEF17 (ENSECRG00000001332) dnajb13 (ENSECRG00000001431) P2RY6 (ENSECRG00000001625) P2RY2 (ENSECRG00000001636) P2RY2 (ENSECRG00000001644) ENSECRG00000001651 P2RY2 (ENSECRG00000001687) FCHSD2 (ENSECRG00000001743) ENSECRG00000001810 rps3 (ENSECRG00000001888) ##22 KCTD14 (ENSECRG00000001975) INTS4 (ENSECRG00000001992) aamdc (ENSECRG00000002029) RSF1 (ENSECRG00000002059) clns1a (ENSECRG00000002093) aqp11 (ENSECRG00000002116) aqp11 (ENSECRG00000002139) pak1 (ENSECRG00000002211) GDPD4 (ENSECRG00000002290) myo7aa (ENSECRG00000002333) capn5a (ENSECRG00000002390) ENSECRG00000002416 ompa (ENSECRG00000002422) dcun1d5 (ENSECRG00000002439) cul5a (ENSECRG00000002478) Neopterygii ANCESTRAL SPECIES 50 ENSGT00510000048072 ENSGT00940000165592 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000175310 ENSGT00530000064411 ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251 ENSGT00940000155350 ENSGT00940000156536.e.a ENSGT00390000009497 ENSGT00940000156155 ENSGT00940000156648 ENSGT00390000018904 Osteoglossocephalai ANCESTRAL SPECIES 12 ENSGT00940000160751 ENSGT00940000161641 ENSGT00940000167407 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681 ENSGT00940000157023 ENSGT00940000157637.a ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000175310 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.b ENSGT00530000063816.c.a ENSGT00940000156251.b ENSGT00940000155350.h ENSGT00940000156536.e.a Clupeocephala ANCESTRAL SPECIES 10 ENSGT00940000160751 ENSGT00940000161641 ENSGT00940000167407 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000175310 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.b ENSGT00530000063816.c.a ENSGT00940000156251.b ENSGT00940000155350.h ENSGT00390000009497.a Euteleosteomorpha ANCESTRAL SPECIES 235 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00940000175310 ENSGT00530000064411.a ENSGT00940000165195 ENSGT00530000064411.b ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000166878 ENSGT00940000157247.b ENSGT00940000155350.g Acanthomorphata ANCESTRAL SPECIES 208 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00940000175310 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000166878 ENSGT00940000157247.b ENSGT00940000155350.g ENSGT00390000009497.b ENSGT00940000156536.e.b Cod MODERN SPECIES 7 ENSGMOG00000026092 ENSGMOG00000028753 ENSGMOG00000027481 exosc5 (ENSGMOG00000015865) bckdha (ENSGMOG00000015877) B3GNT8 (ENSGMOG00000024448) ENSGMOG00000015902 ENSGMOG00000029196 ENSGMOG00000001696 ENSGMOG00000000830 ENSGMOG00000000211 ENSGMOG00000000188 ENSGMOG00000014212 ENSGMOG00000000226 ENSGMOG00000036031 ENSGMOG00000000838 ##22 ENSGMOG00000034058 ENSGMOG00000027330 ENSGMOG00000034520 ENSGMOG00000030543 ENSGMOG00000030587 ENSGMOG00000034706 ENSGMOG00000022282 ENSGMOG00000023660 ENSGMOG00000028162 ENSGMOG00000030515 ENSGMOG00000035580 ENSGMOG00000032301 ENSGMOG00000036053 ENSGMOG00000030167 ENSGMOG00000030456 Euacanthomorphacea ANCESTRAL SPECIES 33 ENSGT00940000154629.A ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00390000011810 ENSGT00970000193454 ENSGT00940000153123.A ENSGT00940000159610 ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00910000144115.b ENSGT00940000158344.a.a ENSGT00390000018436.b ENSGT00940000159343 ENSGT00940000165978 ENSGT00390000009409 Pinecone sodierfish MODERN SPECIES 4 ENSMMDG00005005381 ENSMMDG00005005386 ENSMMDG00005005389 ENSMMDG00005005391 ENSMMDG00005005393 zgc:171927 (ENSMMDG00005005397) ENSMMDG00005005399 ENSMMDG00005005404 ENSMMDG00005005427 ENSMMDG00005005431 ENSMMDG00005005432 ENSMMDG00005005433 ENSMMDG00005005435 ENSMMDG00005005440 ENSMMDG00005005441 rps3 (ENSMMDG00005005451) ##22 KCTD14 (ENSMMDG00005005719) ENSMMDG00005005724 INTS4 (ENSMMDG00005005732) aamdc (ENSMMDG00005005753) ENSMMDG00005005762 ech1 (ENSMMDG00005005808) ENSMMDG00005005849 med17 (ENSMMDG00005005881) ENSMMDG00005006403 ENSMMDG00005006408 ENSMMDG00005006412 ENSMMDG00005006415 ENSMMDG00005006418 hnrnpl2 (ENSMMDG00005006442) srsf7a (ENSMMDG00005006825) Percomorphaceae ANCESTRAL SPECIES 44 ENSGT00940000154629.A ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00390000011810 ENSGT00970000193454 ENSGT00940000153123.A ENSGT00940000159610 ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00910000144115.b ENSGT00940000158344.a.a ENSGT00390000018436.b ENSGT00940000159343 ENSGT00940000165978 ENSGT00390000009409 Tiger tail seahorse MODERN SPECIES 30 SHKBP1 (ENSHCOG00000020947) ENSHCOG00000020958 ENSHCOG00000021032 triap1 (ENSHCOG00000004855) supt5h (ENSHCOG00000004932) rnaset2l (ENSHCOG00000004939) dlc (ENSHCOG00000004943) timm50 (ENSHCOG00000004951) CLIP3 (ENSHCOG00000004985) ENSHCOG00000004995 ENSHCOG00000005006 zgc:162698 (ENSHCOG00000005015) ENSHCOG00000005026 zgc:101731 (ENSHCOG00000005041) ENSHCOG00000000792 rps3 (ENSHCOG00000005060) ##22 KCTD14 (ENSHCOG00000005070) INTS4 (ENSHCOG00000005108) aamdc (ENSHCOG00000005120) arrb1 (ENSHCOG00000006060) #21 ENSHCOG00000006115 ENSHCOG00000006194 ##21 atg16l1 (ENSHCOG00000006312) eif2a (ENSHCOG00000006342) zgc:92744 (ENSHCOG00000006350) mmp23bb (ENSHCOG00000006372) rnpepl1 (ENSHCOG00000006378) rpl35a (ENSHCOG00000006386) ENSHCOG00000006394 ABCF3 (ENSHCOG00000006412) polr2d (ENSHCOG00000006425) Percomorphaceae_B ANCESTRAL SPECIES 25 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163299.B.b.b.h.d ENSGT00940000155987.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000163467.a.b.b.a.a ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00940000175310 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00990000204560 ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.b ENSGT00390000009497.b Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000155987.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00940000175310 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00990000204560 ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.b ENSGT00390000009497.b Eupercaria ANCESTRAL SPECIES 7 ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000155987.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00990000204560 ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 Tetraodontidae ANCESTRAL SPECIES 115 ENSGT00390000011810 ENSGT00970000193454 ENSGT00940000158512.a ENSGT00530000063811.A.a.b ENSGT00560000077232.B.g.a ENSGT00390000015655.a.m.a ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00390000010063 ENSGT00530000063816.c.b Fugu MODERN SPECIES 2 LSAMP (ENSTRUG00000002646) ENSTRUG00000023411 ENSTRUG00000003471 cd3e (ENSTRUG00000028873) cd3g/d (ENSTRUG00000003789) ENSTRUG00000003875 SIK3 (ENSTRUG00000004023) med17 (ENSTRUG00000004276) ENSTRUG00000028563 ENSTRUG00000004689 FAM222B (ENSTRUG00000005106) flot2b (ENSTRUG00000005208) SLC35F2 (ENSTRUG00000005526) ompa (ENSTRUG00000006040) CAPN5 (ENSTRUG00000005683) rps3 (ENSTRUG00000023549) ##22 KCTD14 (ENSTRUG00000022906) nccrp1 (ENSTRUG00000022576) INTS4 (ENSTRUG00000006471) aamdc (ENSTRUG00000021092) panx1a (ENSTRUG00000006765) ENSTRUG00000006905 clns1a (ENSTRUG00000007089) aqp11 (ENSTRUG00000007188) gdpd1 (ENSTRUG00000007222) tmem120ab (ENSTRUG00000007407) porb (ENSTRUG00000007436) taf15 (ENSTRUG00000007798) MMP28 (ENSTRUG00000020202) ENSTRUG00000025749 hspa13 (ENSTRUG00000022313) Eupecaria_A ANCESTRAL SPECIES 9 ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000155987.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00990000204560 ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 Ballan wrasse MODERN SPECIES 761 rps3 (ENSLBEG00000021017) ##22 KCTD14 (ENSLBEG00000020933) ENSLBEG00000020920 INTS4 (ENSLBEG00000020854) aamdc (ENSLBEG00000020816) Eupecaria_B ANCESTRAL SPECIES 9 ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000155987.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00990000204560.a ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00910000144115.b ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00940000159610 ENSGT00940000153123.A ENSGT00390000011810 ENSGT00970000193454 ENSGT00940000158512.a ENSGT00530000063811.A.a.b ENSGT00560000077232.B.g.a ENSGT00390000010744.m.d ENSGT00390000015655.a.m.a ENSGT00940000156648.c ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00990000204560.a ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00530000064359.c.a ENSGT00940000155076.b.a.a.b ENSGT00940000167295 Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00910000144115.b ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00940000159610 ENSGT00940000153123.A ENSGT00390000011810 ENSGT00970000193454 ENSGT00940000158512.a ENSGT00530000063811.A.a.b ENSGT00560000077232.B.g.a ENSGT00390000010744.m.d ENSGT00390000015655.a.m.a ENSGT00940000156648.c ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00530000064359.c.a ENSGT00940000155076.b.a.a.b ENSGT00940000167295 ENSGT00940000164973 European seabass MODERN SPECIES 3 ENSDLAG00005004308 ENSDLAG00005004351 ENSDLAG00005033394 ENSDLAG00005004743 ENSDLAG00005033438 ENSDLAG00005015971 ENSDLAG00005033239 ENSDLAG00005005041 ENSDLAG00005005056 ENSDLAG00005005085 ENSDLAG00005005420 ENSDLAG00005032013 ENSDLAG00005031445 ENSDLAG00005006082 ENSDLAG00005006108 rps3 (ENSDLAG00005006114) ##22 KCTD14 (ENSDLAG00005006243) ENSDLAG00005006256 ENSDLAG00005006285 ENSDLAG00005006323 ENSDLAG00005007136 RSF1 (ENSDLAG00005007153) ENSDLAG00005030366 clns1a (ENSDLAG00005032077) aqp11 (ENSDLAG00005031387) ENSDLAG00005003383 ENSDLAG00005006820 ENSDLAG00005015787 pak1 (ENSDLAG00005007216) GDPD4 (ENSDLAG00005007565) myo7aa (ENSDLAG00005007604) Large yellow croaker MODERN SPECIES 479 ENSLCRG00005021232 aamdc (ENSLCRG00005002347) aamdc (ENSLCRG00005002361) ENSLCRG00005002383 FAM222B (ENSLCRG00005002400) flot2b (ENSLCRG00005002417) rhbdd1 (ENSLCRG00005002545) ENSLCRG00005002565 SLC35F2 (ENSLCRG00005002621) CUL5 (ENSLCRG00005002641) CAPN5 (ENSLCRG00005002764) ompa (ENSLCRG00005003649) dcun1d5 (ENSLCRG00005003651) ENSLCRG00005003654 ENSLCRG00005003655 rps3 (ENSLCRG00005003658) ##22 KCTD14 (ENSLCRG00005003749) ENSLCRG00005003764 INTS4 (ENSLCRG00005003790) panx1a (ENSLCRG00005004777) clns1a (ENSLCRG00005004782) aqp11 (ENSLCRG00005004785) pak1 (ENSLCRG00005004795) GDPD4 (ENSLCRG00005004869) myo7aa (ENSLCRG00005004902) ENSLCRG00005008126 zgc:171927 (ENSLCRG00005008127) ENSLCRG00005008128 ENSLCRG00005008130 ENSLCRG00005008132 ENSLCRG00005008134 Gilthead seabream MODERN SPECIES 11 ech1 (ENSSAUG00010006869) ENSSAUG00010006854 med17 (ENSSAUG00010006306) ENSSAUG00010006297 TRPV2 (ENSSAUG00010006273) FAM222B (ENSSAUG00010006269) flot2b (ENSSAUG00010006249) ENSSAUG00010006246 ENSSAUG00010006244 SLC35F2 (ENSSAUG00010006242) CUL5 (ENSSAUG00010005742) ENSSAUG00010005721 ompa (ENSSAUG00010005720) CAPN5 (ENSSAUG00010005676) dcun1d5 (ENSSAUG00010005671) rps3 (ENSSAUG00010005562) ##22 KCTD14 (ENSSAUG00010005558) ENSSAUG00010005556 INTS4 (ENSSAUG00010005143) aamdc (ENSSAUG00010005135) panx1a (ENSSAUG00010005133) RSF1 (ENSSAUG00010005129) clns1a (ENSSAUG00010005127) aqp11 (ENSSAUG00010005126) ENSSAUG00010005122 rhbdd1 (ENSSAUG00010005118) pak1 (ENSSAUG00010004958) ENSSAUG00010004943 myo7aa (ENSSAUG00010003617) ENSSAUG00010003580 ENSSAUG00010003578 Perciformes ANCESTRAL SPECIES 10 ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.b.d ENSGT00390000009497.b ENSGT00940000156155 ENSGT00940000156648.c Cottioidei ANCESTRAL SPECIES 4 ENSGT01030000234567.B.a.a.b.b.b ENSGT00390000006030.d.a.b ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00530000063811.A.a.b ENSGT00560000077232.B.g.a ENSGT00390000015655.a.m.a ENSGT00940000156648.c ENSGT00940000156155 ENSGT00390000009497.b ENSGT00940000156536.e.b.d ENSGT00940000155350.g ENSGT00940000156251.a ENSGT00950000182988.a.b.a ENSGT00530000063816.c.b Lumpfish MODERN SPECIES 17 ENSCLMG00005005535 ENSCLMG00005005561 panx1a (ENSCLMG00005005567) clns1a (ENSCLMG00005005569) aqp11 (ENSCLMG00005005571) pak1 (ENSCLMG00005005574) GDPD4 (ENSCLMG00005005762) myo7aa (ENSCLMG00005005767) ompa (ENSCLMG00005005874) CAPN5 (ENSCLMG00005005886) dcun1d5 (ENSCLMG00005006221) CUL5 (ENSCLMG00005006228) SLC35F2 (ENSCLMG00005006549) FLOT2 (ENSCLMG00005006552) FAM222B (ENSCLMG00005006558) rps3 (ENSCLMG00005006563) ##22 KCTD14 (ENSCLMG00005006747) ENSCLMG00005006749 INTS4 (ENSCLMG00005006751) aamdc (ENSCLMG00005006752) ENSCLMG00005006760 zgc:171927 (ENSCLMG00005006761) ENSCLMG00005006763 si:cabz01090165.1 (ENSCLMG00005006766) ENSCLMG00005006767 ENSCLMG00005006770 zgc:101731 (ENSCLMG00005006772) ENSCLMG00005006774 CAPNS1 (ENSCLMG00005006775) zgc:162698 (ENSCLMG00005006777) ENSCLMG00005006778 Stickleback MODERN SPECIES timm50 (ENSGACG00000013476) CLIP3 (ENSGACG00000013467) ENSGACG00000013464 ENSGACG00000013461 ENSGACG00000013456 ENSGACG00000013452 zgc:162698 (ENSGACG00000013443) CAPNS1 (ENSGACG00000013438) zgc:101731 (ENSGACG00000013425) ENSGACG00000013423 ENSGACG00000013418 si:cabz01090165.1 (ENSGACG00000013416) ENSGACG00000013412 zgc:171927 (ENSGACG00000013401) ENSGACG00000013400 rps3 (ENSGACG00000013384) ##22 KCTD14 (ENSGACG00000013383) INTS4 (ENSGACG00000013367) ENSGACG00000013364 b3galt10.2 (ENSGACG00000013361) FAM222B (ENSGACG00000013360) flot2b (ENSGACG00000013325) SLC35F2 (ENSGACG00000013315) CUL5 (ENSGACG00000013311) dcun1d5 (ENSGACG00000013296) ompa (ENSGACG00000013293) CAPN5 (ENSGACG00000013281) myo7aa (ENSGACG00000013269) GDPD4 (ENSGACG00000013263) pak1 (ENSGACG00000013257) clns1a (ENSGACG00000013233) Perciformes_a ANCESTRAL SPECIES 9 ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000174501 ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.b.d ENSGT00390000009497.b ENSGT00940000156155 ENSGT00940000156648.c Pike perch MODERN SPECIES 19 ENSSLUG00000005572 zgc:162698 (ENSSLUG00000005559) ENSSLUG00000005553 CAPNS1 (ENSSLUG00000005541) zgc:101731 (ENSSLUG00000005528) ENSSLUG00000005523 si:cabz01090165.1 (ENSSLUG00000005314) ENSSLUG00000005271 ENSSLUG00000005257 ENSSLUG00000005245 zgc:171927 (ENSSLUG00000005231) ENSSLUG00000005206 ENSSLUG00000019002 ENSSLUG00000018997 ENSSLUG00000018985 rps3 (ENSSLUG00000018833) ##22 KCTD14 (ENSSLUG00000018797) ENSSLUG00000018790 INTS4 (ENSSLUG00000018416) aamdc (ENSSLUG00000018397) ENSSLUG00000018393 flot2b (ENSSLUG00000018380) ENSSLUG00000018373 SLC35F2 (ENSSLUG00000018367) CUL5 (ENSSLUG00000018340) ENSSLUG00000018324 dcun1d5 (ENSSLUG00000018317) ENSSLUG00000018314 ompa (ENSSLUG00000018310) CAPN5 (ENSSLUG00000017823) ENSSLUG00000017806 Channel bull blenny MODERN SPECIES 4 tmem97 (ENSCGOG00000005607) ENSCGOG00000005603 USP6 (ENSCGOG00000004642) ENSCGOG00000004625 appbp2 (ENSCGOG00000004101) ppm1da (ENSCGOG00000009897) brip1 (ENSCGOG00000009883) tbx4 (ENSCGOG00000009800) tbx2b (ENSCGOG00000009709) ENSCGOG00000009693 bcas3 (ENSCGOG00000009269) si:cabz01090165.1 (ENSCGOG00000009245) zgc:171927 (ENSCGOG00000009232) ENSCGOG00000009229 ENSCGOG00000009226 rps3 (ENSCGOG00000009090) ##22 KCTD14 (ENSCGOG00000009080) ENSCGOG00000009075 INTS4 (ENSCGOG00000008524) aamdc (ENSCGOG00000008509) panx1a (ENSCGOG00000008497) RSF1 (ENSCGOG00000008475) clns1a (ENSCGOG00000008472) aqp11 (ENSCGOG00000008470) ENSCGOG00000008468 pak1 (ENSCGOG00000008467) ENSCGOG00000008466 GDPD4 (ENSCGOG00000008462) myo7aa (ENSCGOG00000008392) ompa (ENSCGOG00000008387) CAPN5 (ENSCGOG00000007507) Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00940000175310 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00940000156155 Anabantaria ANCESTRAL SPECIES 9 ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00940000156155 ENSGT00940000156648.c Anabantoidei ANCESTRAL SPECIES 29 ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 ENSGT00940000156648.c Climbing perch MODERN SPECIES 4 ENSATEG00000002938 dharma (ENSATEG00000025904) ENSATEG00000003033 ENSATEG00000003063 zgc:162698 (ENSATEG00000003074) ENSATEG00000003089 zgc:101731 (ENSATEG00000003100) ENSATEG00000025650 ENSATEG00000003178 si:cabz01090165.1 (ENSATEG00000003302) ENSATEG00000029865 ENSATEG00000003410 ENSATEG00000003430 ENSATEG00000003462 ENSATEG00000003476 rps3 (ENSATEG00000003502) ##22 KCTD14 (ENSATEG00000003545) ENSATEG00000003549 ENSATEG00000003556 aamdc (ENSATEG00000003660) ENSATEG00000003698 ENSATEG00000003736 ENSATEG00000003745 clns1a (ENSATEG00000003771) aqp11 (ENSATEG00000030022) pak1 (ENSATEG00000003807) GDPD4 (ENSATEG00000003826) myo7aa (ENSATEG00000003932) CAPN5 (ENSATEG00000004124) ompa (ENSATEG00000004196) dcun1d5 (ENSATEG00000004210) Siamese fighting fish MODERN SPECIES 4 ENSBSLG00000012796 triap1 (ENSBSLG00000012793) supt5h (ENSBSLG00000011887) ENSBSLG00000011395 ENSBSLG00000011392 dlc (ENSBSLG00000011388) timm50 (ENSBSLG00000011371) dharma (ENSBSLG00000011365) CLIP3 (ENSBSLG00000011017) ENSBSLG00000010976 zgc:162698 (ENSBSLG00000010892) ENSBSLG00000010785 si:cabz01090165.1 (ENSBSLG00000010716) ENSBSLG00000010637 ENSBSLG00000010573 rps3 (ENSBSLG00000010419) ##22 ENSBSLG00000010407 INTS4 (ENSBSLG00000009920) aamdc (ENSBSLG00000009809) PANX1 (ENSBSLG00000009790) RSF1 (ENSBSLG00000009727) clns1a (ENSBSLG00000009694) ENSBSLG00000009536 ENSBSLG00000009526 P2RY14 (ENSBSLG00000009522) SHKBP1 (ENSBSLG00000008487) ENSBSLG00000008391 ilkap (ENSBSLG00000011378) ENSBSLG00000011368 ENSBSLG00000011362 ilkap (ENSBSLG00000011360) Zig-zag eel MODERN SPECIES 4 timm50 (ENSMAMG00000019880) ENSMAMG00000019899 dharma (ENSMAMG00000024972) ENSMAMG00000019916 ENSMAMG00000019921 zgc:162698 (ENSMAMG00000019926) ENSMAMG00000019936 zgc:101731 (ENSMAMG00000024592) ENSMAMG00000019947 ENSMAMG00000019966 ENSMAMG00000020083 ENSMAMG00000020121 ENSMAMG00000020125 ENSMAMG00000020135 ENSMAMG00000020144 rps3 (ENSMAMG00000027955) ##22 KCTD14 (ENSMAMG00000024953) ENSMAMG00000020176 aamdc (ENSMAMG00000020209) Carangaria ANCESTRAL SPECIES 8 ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00940000175310 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00940000156155 Pleuronectoidei ANCESTRAL SPECIES 43 ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT01040000240400.c.b.a.a.a.a ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 Turbot MODERN SPECIES 15 ENSSMAG00000004981 ENSSMAG00000004923 dharma (ENSSMAG00000035056) ENSSMAG00000004902 ENSSMAG00000004895 zgc:162698 (ENSSMAG00000004823) ENSSMAG00000004795 zgc:101731 (ENSSMAG00000030306) ENSSMAG00000004780 ENSSMAG00000033293 ENSSMAG00000000805 ENSSMAG00000010153 ENSSMAG00000019928 ENSSMAG00000037429 ENSSMAG00000031710 rps3 (ENSSMAG00000004341) ##22 KCTD14 (ENSSMAG00000034158) ENSSMAG00000004233 aamdc (ENSSMAG00000025950) ENSSMAG00000004204 rps6kb1b (ENSSMAG00000004157) ENSSMAG00000004126 vmp1 (ENSSMAG00000004088) ENSSMAG00000004072 ENSSMAG00000003979 ENSSMAG00000003958 bace2 (ENSSMAG00000003934) ENSSMAG00000003813 ENSSMAG00000003801 ENSSMAG00000003771 sh3bgr (ENSSMAG00000025337) Tongue sole MODERN SPECIES 14 acad8 (ENSCSEG00000013620) ENSCSEG00000013629 DOCK10 (ENSCSEG00000013717) hnf1ba (ENSCSEG00000014243) srsf1a (ENSCSEG00000014272) aldoca (ENSCSEG00000014296) ENSCSEG00000014306 ENSCSEG00000014313 ENSCSEG00000014326 ENSCSEG00000014340 picalmb (ENSCSEG00000014370) ZPLD1 (ENSCSEG00000014395) si:cabz01090165.1 (ENSCSEG00000014407) zgc:171927 (ENSCSEG00000014416) ENSCSEG00000014426 rps3 (ENSCSEG00000014436) ##22 KCTD14 (ENSCSEG00000014476) dpf1 (ENSCSEG00000014490) zgc:162193 (ENSCSEG00000014544) ENSCSEG00000014553 pnkp (ENSCSEG00000014581) ENSCSEG00000014622 ENSCSEG00000014646 cbln20 (ENSCSEG00000014674) cbln20 (ENSCSEG00000014679) tagln (ENSCSEG00000014684) pcsk7 (ENSCSEG00000014699) bace1 (ENSCSEG00000014707) ENSCSEG00000014715 ENSCSEG00000014718 ENSCSEG00000014733 Carangaria_A ANCESTRAL SPECIES 10 ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00990000204173 ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00940000175310 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00940000156155 Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 1589 ENSLCAG00010013075 rps3 (ENSLCAG00010013011) ##22 KCTD14 (ENSLCAG00010012993) Barramundi perch MODERN SPECIES 303 ENSLCAG00010009235 zgc:162698 (ENSLCAG00010009211) CAPNS1 (ENSLCAG00010009201) zgc:101731 (ENSLCAG00010009196) ENSLCAG00010009193 si:cabz01090165.1 (ENSLCAG00010009190) zgc:171927 (ENSLCAG00010009177) ENSLCAG00010009172 ENSLCAG00010009166 ENSLCAG00010009160 ENSLCAG00010009154 rps3 (ENSLCAG00010009095) ##22 KCTD14 (ENSLCAG00010009080) Seriola ANCESTRAL SPECIES 38 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00990000204173 ENSGT00940000164973 ENSGT00940000163467.a.b.b.a.a.h.a ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00940000175310 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00940000156155 Yellowtail amberjack MODERN SPECIES 3279 ENSSLDG00000017843 ENSSLDG00000017851 ENSSLDG00000017867 ENSSLDG00000017888 zgc:101731 (ENSSLDG00000017909) ENSSLDG00000017921 ENSSLDG00000017932 ENSSLDG00000017948 si:cabz01090165.1 (ENSSLDG00000017960) ENSSLDG00000017979 ENSSLDG00000017993 ENSSLDG00000018009 zgc:171927 (ENSSLDG00000018024) ENSSLDG00000018035 ENSSLDG00000018045 rps3 (ENSSLDG00000018053) ##22 KCTD14 (ENSSLDG00000018092) ENSSLDG00000018103 INTS4 (ENSSLDG00000018114) aamdc (ENSSLDG00000018157) panx1a (ENSSLDG00000018171) ENSSLDG00000018188 Greater amberjack MODERN SPECIES 14 ENSSDUG00000004851 ENSSDUG00000004839 zgc:162698 (ENSSDUG00000004818) ENSSDUG00000004797 zgc:101731 (ENSSDUG00000004763) ENSSDUG00000004748 ENSSDUG00000004746 ENSSDUG00000004724 ENSSDUG00000004681 si:cabz01090165.1 (ENSSDUG00000004519) ENSSDUG00000004486 ENSSDUG00000004465 zgc:171927 (ENSSDUG00000004445) ENSSDUG00000004426 ENSSDUG00000004417 rps3 (ENSSDUG00000004327) ##22 KCTD14 (ENSSDUG00000004288) INTS4 (ENSSDUG00000004164) aamdc (ENSSDUG00000004148) panx1a (ENSSDUG00000004139) ENSSDUG00000004129 RSF1 (ENSSDUG00000004112) clns1a (ENSSDUG00000004087) aqp11 (ENSSDUG00000004063) pak1 (ENSSDUG00000003997) GDPD4 (ENSSDUG00000003964) myo7aa (ENSSDUG00000003850) ENSSDUG00000003826 ompa (ENSSDUG00000003820) CAPN5 (ENSSDUG00000003779) dcun1d5 (ENSSDUG00000003755) Ovalentaria ANCESTRAL SPECIES 8 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163299.B.b.b.h.d ENSGT00940000155987.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00940000163467.a.b.b.a.a.j ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a.m ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00940000175310 ENSGT00530000064411.a ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 ENSGT00940000156648.c ENSGT00390000015655.a.m.a ENSGT00390000010744.m.d ENSGT00390000010063 ENSGT00530000063816.c.b Atherinomorphae ANCESTRAL SPECIES 26 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163299.B.b.b.h.d ENSGT00940000155987.b ENSGT00940000163299.B.b.b.h.c.a ENSGT00940000164973 ENSGT00530000064359.c.a.n ENSGT00530000064359.c.a.m ENSGT00940000155076.b.a.a.b ENSGT00940000167295 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 Oryzias ANCESTRAL SPECIES 32 ENSGT01040000240503.C ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000174501 ENSGT00940000164973 ENSGT00530000064359.c.a.n.f ENSGT00530000064359.c.a.m ENSGT00940000155076.b.a.a.b ENSGT00940000167295 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000159610 ENSGT00940000153123.A ENSGT00390000011810 ENSGT00970000193454 ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00910000144115.b ENSGT00940000158344.a.a ENSGT00940000159343 ENSGT00940000165978 ENSGT00390000009409 ENSGT00940000153348.C Oryzias_a ANCESTRAL SPECIES 8 ENSGT00530000064359.c.a.n.e ENSGT00530000064359.c.a.m ENSGT00940000155076.b.a.a.b ENSGT00940000167295 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000159610 ENSGT00940000153123.A ENSGT00390000011810 ENSGT00970000193454 ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00910000144115.b ENSGT00940000158344.a.a ENSGT00940000159343 ENSGT00940000165978 ENSGT00390000009409 ENSGT00950000183147.A.b.a Japanese Medaka HdrR MODERN SPECIES 4 ENSORLG00000000544 ENSORLG00000023751 ENSORLG00000026503 ENSORLG00000025949 ENSORLG00000022808 ENSORLG00000023897 si:cabz01090165.1 (ENSORLG00000000558) ENSORLG00000022982 ENSORLG00000025557 ENSORLG00000000575 ENSORLG00000023420 ENSORLG00000000580 ENSORLG00000026906 ENSORLG00000024026 zgc:171927 (ENSORLG00000000602) rps3 (ENSORLG00000000607) ##22 KCTD14 (ENSORLG00000026076) ENSORLG00000023967 INTS4 (ENSORLG00000000640) aamdc (ENSORLG00000000651) ech1 (ENSORLG00000000679) ENSORLG00000028825 med17 (ENSORLG00000000709) ENSORLG00000000715 hnrnpl2 (ENSORLG00000000724) srsf7a (ENSORLG00000000746) slc8a2b (ENSORLG00000000756) ENSORLG00000000939 zgc:85932 (ENSORLG00000000963) EIF3K (ENSORLG00000000980) TMEM91 (ENSORLG00000000984) Chinese medaka MODERN SPECIES 705 ENSOSIG00000009954 ENSOSIG00000009955 ENSOSIG00000009956 zgc:171927 (ENSOSIG00000009957) rps3 (ENSOSIG00000009958) ##22 KCTD14 (ENSOSIG00000009962) ENSOSIG00000009964 ENSOSIG00000009965 INTS4 (ENSOSIG00000009966) aamdc (ENSOSIG00000009992) ech1 (ENSOSIG00000009994) med17 (ENSOSIG00000010006) ENSOSIG00000010009 Oryzias_b ANCESTRAL SPECIES 32 ENSGT00940000154629.A ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT01070000253760.b.a.a.a.b.a.a.a.a.a.b.b ENSGT00940000159557 ENSGT01000000214804 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00940000174501 ENSGT00940000164973 ENSGT00530000064359.c.a.n.f ENSGT00940000155076.b.a.a.b ENSGT00940000167295 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000159610 ENSGT00940000153123.A ENSGT00390000011810 ENSGT00970000193454 ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00910000144115.b ENSGT00940000158344.a.a ENSGT00940000159343 ENSGT00940000165978 ENSGT00390000009409 ENSGT00940000153348.C ENSGT00950000183147.A.b.a Javanese ricefish MODERN SPECIES 4 ENSOJAG00000023634 zgc:162698 (ENSOJAG00000023628) ENSOJAG00000023619 zgc:101731 (ENSOJAG00000023615) ENSOJAG00000023612 ENSOJAG00000023611 ENSOJAG00000023606 si:cabz01090165.1 (ENSOJAG00000023602) ENSOJAG00000023597 ENSOJAG00000023592 ENSOJAG00000023590 ENSOJAG00000023588 ENSOJAG00000023586 ENSOJAG00000023584 ENSOJAG00000023578 rps3 (ENSOJAG00000023563) ##22 KCTD14 (ENSOJAG00000023556) INTS4 (ENSOJAG00000023505) aamdc (ENSOJAG00000023478) ech1 (ENSOJAG00000023475) med17 (ENSOJAG00000023469) ENSOJAG00000023461 hnrnpl2 (ENSOJAG00000023449) srsf7a (ENSOJAG00000023443) ENSOJAG00000022992 zgc:85932 (ENSOJAG00000022849) eif3k (ENSOJAG00000022837) ENSOJAG00000022823 ENSOJAG00000022793 ENSOJAG00000022753 ENSOJAG00000022730 Indian medaka MODERN SPECIES 12 chp2 (ENSOMEG00000019784) ENSOMEG00000019807 timm50 (ENSOMEG00000019843) ENSOMEG00000019867 CLIP3 (ENSOMEG00000019907) ENSOMEG00000019989 ENSOMEG00000020034 zgc:162698 (ENSOMEG00000020144) ENSOMEG00000020253 zgc:101731 (ENSOMEG00000020372) ENSOMEG00000020400 si:cabz01090165.1 (ENSOMEG00000020505) ENSOMEG00000020546 ENSOMEG00000020565 zgc:171927 (ENSOMEG00000020594) rps3 (ENSOMEG00000020705) ##22 KCTD14 (ENSOMEG00000020802) INTS4 (ENSOMEG00000020918) aamdc (ENSOMEG00000020826) ech1 (ENSOMEG00000020974) ENSOMEG00000021089 ENSOMEG00000021105 med17 (ENSOMEG00000021125) ENSOMEG00000021153 hnrnpl2 (ENSOMEG00000021227) ENSOMEG00000021267 slc8a2b (ENSOMEG00000021281) ENSOMEG00000021538 zgc:85932 (ENSOMEG00000021620) eif3k (ENSOMEG00000021661) ENSOMEG00000021692 Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00940000175310 ENSGT00530000064411.a ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 ENSGT00940000156648.c ENSGT00390000015655.a.m.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00530000064359.c.a.n ENSGT00940000155076.b.a.a.b ENSGT00940000167295 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153348.C ENSGT00950000183147.A.b.a ENSGT00940000160551 ENSGT00390000009795 ENSGT00940000157823 ENSGT00940000159883 ENSGT00940000155288.b ENSGT00940000160378 ENSGT00940000160232 ENSGT00940000174794 ENSGT00940000162064.h Cyprinodontoidei ANCESTRAL SPECIES 9 ENSGT00940000153972.A.a ENSGT00940000175310 ENSGT00530000064411.a ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 ENSGT00940000156648.c ENSGT00390000015655.a.m.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000155076.b.a.a.b ENSGT00940000167295 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153348.C ENSGT00950000183147.A.b.a ENSGT00940000160551 ENSGT00390000009795 ENSGT00940000157823 ENSGT00940000159883 ENSGT00940000155288.b ENSGT00940000160378 ENSGT00940000160232 ENSGT00940000174794 ENSGT00940000162064.h Poeciliinae ANCESTRAL SPECIES 14 ENSGT00530000063174.b ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 ENSGT00940000156648.c ENSGT00390000015655.a.m.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000155076.b.a.a.b ENSGT00940000167295 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153348.C ENSGT00950000183147.A.b.a ENSGT00940000160551 ENSGT00390000009795 ENSGT00940000157823 ENSGT00940000159883 ENSGT00940000155288.b ENSGT00940000160378 ENSGT00940000160232 ENSGT00940000174794 ENSGT00940000162064.h.g Poecilia ANCESTRAL SPECIES 2 ENSGT00530000063174.b ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 ENSGT00940000156648.c ENSGT00390000015655.a.m.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000155076.b.a.a.b ENSGT00940000167295 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153348.C ENSGT00950000183147.A.b.a ENSGT00940000160551 ENSGT00390000009795 ENSGT00940000157823 ENSGT00940000159883 ENSGT00940000155288.b ENSGT00940000160378.db ENSGT00940000160378.eb ENSGT00940000160232 ENSGT00940000174794 Guppy MODERN SPECIES 443 ENSPREG00000017119 panx1a (ENSPREG00000017142) ENSPREG00000017168 CAPN5 (ENSPREG00000017184) ompa (ENSPREG00000017203) dcun1d5 (ENSPREG00000017217) CUL5 (ENSPREG00000017245) SLC35F2 (ENSPREG00000017275) clns1a (ENSPREG00000017305) aqp11 (ENSPREG00000017322) pak1 (ENSPREG00000017333) GDPD4 (ENSPREG00000017372) myo7aa (ENSPREG00000017413) ENSPREG00000017495 zgc:171927 (ENSPREG00000017517) rps3 (ENSPREG00000017536) ##22 KCTD14 (ENSPREG00000017593) ENSPREG00000017611 INTS4 (ENSPREG00000017623) aamdc (ENSPREG00000017651) exosc5 (ENSPREG00000017723) TMEM91 (ENSPREG00000017731) ppp1r13l (ENSPREG00000017741) opa3 (ENSPREG00000017788) HNRNPUL1 (ENSPREG00000017804) rasgrp4 (ENSPREG00000017845) ENSPREG00000017900 ENSPREG00000018025 AXL (ENSPREG00000018073) ENSPREG00000018156 ENSPREG00000018189 NAME_6 ANCESTRAL SPECIES 14 ENSGT00530000063174.b ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 ENSGT00940000156648.c ENSGT00390000015655.a.m.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000155076.b.a.a.b ENSGT00940000167295 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153348.C ENSGT00950000183147.A.b.a ENSGT00940000160551 ENSGT00390000009795 ENSGT00940000157823 ENSGT00940000159883 ENSGT00940000155288.b ENSGT00940000160378.db ENSGT00940000160378.eb ENSGT00940000160232 ENSGT00940000174794 Sailfin molly MODERN SPECIES 1464 zgc:171927 (ENSPLAG00000005869) rps3 (ENSPLAG00000005854) ##22 KCTD14 (ENSPLAG00000005826) ENSPLAG00000005821 INTS4 (ENSPLAG00000005794) aamdc (ENSPLAG00000005733) exosc5 (ENSPLAG00000005701) TMEM91 (ENSPLAG00000005681) ppp1r13l (ENSPLAG00000005671) opa3 (ENSPLAG00000005662) Amazon molly MODERN SPECIES 300 bckdha (ENSPFOG00000011923) panx1a (ENSPFOG00000011966) ENSPFOG00000012002 CAPN5 (ENSPFOG00000012108) ompa (ENSPFOG00000012443) dcun1d5 (ENSPFOG00000012446) CUL5 (ENSPFOG00000012518) SLC35F2 (ENSPFOG00000012711) clns1a (ENSPFOG00000012765) aqp11 (ENSPFOG00000012789) pak1 (ENSPFOG00000012810) GDPD4 (ENSPFOG00000013040) myo7aa (ENSPFOG00000013226) ENSPFOG00000013806 zgc:171927 (ENSPFOG00000013810) rps3 (ENSPFOG00000013835) ##22 KCTD14 (ENSPFOG00000013871) ENSPFOG00000023884 INTS4 (ENSPFOG00000013927) aamdc (ENSPFOG00000014143) exosc5 (ENSPFOG00000014158) ENSPFOG00000014214 ppp1r13l (ENSPFOG00000014217) opa3 (ENSPFOG00000014228) HNRNPUL1 (ENSPFOG00000014230) rasgrp4 (ENSPFOG00000014332) ENSPFOG00000014449 ENSPFOG00000015464 ENSPFOG00000015514 ENSPFOG00000015651 ENSPFOG00000024283 Platyfish MODERN SPECIES 9 ENSXMAG00000028342 CAPN5 (ENSXMAG00000006995) ompa (ENSXMAG00000029785) ENSXMAG00000007014 panx1a (ENSXMAG00000004464) dcun1d5 (ENSXMAG00000004471) CUL5 (ENSXMAG00000004486) SLC35F2 (ENSXMAG00000004522) clns1a (ENSXMAG00000004537) aqp11 (ENSXMAG00000021051) pak1 (ENSXMAG00000004548) GDPD4 (ENSXMAG00000029648) myo7aa (ENSXMAG00000004628) ENSXMAG00000004681 zgc:171927 (ENSXMAG00000004683) rps3 (ENSXMAG00000004703) ##22 KCTD14 (ENSXMAG00000027590) ENSXMAG00000028328 INTS4 (ENSXMAG00000004746) aamdc (ENSXMAG00000004784) ENSXMAG00000022515 exosc5 (ENSXMAG00000004786) ENSXMAG00000004802 ppp1r13l (ENSXMAG00000004805) opa3 (ENSXMAG00000023043) HNRNPUL1 (ENSXMAG00000004815) rasgrp4 (ENSXMAG00000004851) ENSXMAG00000004873 ENSXMAG00000025496 AXL (ENSXMAG00000005926) ENSXMAG00000005995 NAME_4 ANCESTRAL SPECIES 85 ENSGT00940000156155 ENSGT00940000156648.c.c ENSGT00390000015655.a.m.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000155076.b.a.a.b ENSGT00940000167295 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153348.C ENSGT00950000183147.A.b.a ENSGT00940000160551 ENSGT00390000009795 ENSGT01090000261501 ENSGT00940000157823 ENSGT00940000159883 ENSGT00940000155288.b ENSGT00940000160378 ENSGT00940000160232 ENSGT00940000174794 Sheepshead minnow MODERN SPECIES 457 panx1a (ENSCVAG00000008753) ENSCVAG00000008764 ompa (ENSCVAG00000008778) CAPN5 (ENSCVAG00000008810) dcun1d5 (ENSCVAG00000008851) CUL5 (ENSCVAG00000008893) SLC35F2 (ENSCVAG00000009002) clns1a (ENSCVAG00000009019) aqp11 (ENSCVAG00000009023) pak1 (ENSCVAG00000009047) GDPD4 (ENSCVAG00000009074) myo7aa (ENSCVAG00000009198) ENSCVAG00000009207 zgc:171927 (ENSCVAG00000009222) rps3 (ENSCVAG00000009247) ##22 KCTD14 (ENSCVAG00000009254) ENSCVAG00000009262 INTS4 (ENSCVAG00000009362) aamdc (ENSCVAG00000009374) exosc5 (ENSCVAG00000009396) ENSCVAG00000009406 ppp1r13l (ENSCVAG00000009418) opa3 (ENSCVAG00000009429) ENSCVAG00000009437 ENSCVAG00000009445 ENSCVAG00000009448 HNRNPUL1 (ENSCVAG00000009524) rasgrp4 (ENSCVAG00000009549) ENSCVAG00000009615 ENSCVAG00000009653 Aplocheiloidei ANCESTRAL SPECIES 82 ENSGT00940000164973 ENSGT00530000064359.c.a.n.b ENSGT00530000064359.c.a.n.a ENSGT00940000155076.b.a.a.b ENSGT00940000167295 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153348.C ENSGT00950000183147.A.b.a ENSGT00940000160551 ENSGT00390000009795 ENSGT00940000157823 ENSGT00940000159883 ENSGT00940000155288.b ENSGT00940000160378 ENSGT00940000160232 ENSGT00940000174794 ENSGT00940000162064.h Mangrove rivulus MODERN SPECIES 146 STK32C (ENSKMAG00000010168) CLIP3 (ENSKMAG00000010121) ENSKMAG00000010099 ENSKMAG00000010084 CAPNS1 (ENSKMAG00000010068) zgc:101731 (ENSKMAG00000010045) ENSKMAG00000010031 ENSKMAG00000010006 ENSKMAG00000009991 si:cabz01090165.1 (ENSKMAG00000009971) ENSKMAG00000009953 ENSKMAG00000009947 ENSKMAG00000009910 ENSKMAG00000009884 zgc:171927 (ENSKMAG00000009856) rps3 (ENSKMAG00000009747) ##22 KCTD14 (ENSKMAG00000009691) ENSKMAG00000009674 INTS4 (ENSKMAG00000009623) aamdc (ENSKMAG00000009579) exosc5 (ENSKMAG00000009517) TMEM91 (ENSKMAG00000009497) ppp1r13l (ENSKMAG00000009480) opa3 (ENSKMAG00000009466) HNRNPUL1 (ENSKMAG00000009438) rasgrp4 (ENSKMAG00000009408) ENSKMAG00000009149 ENSKMAG00000009102 AXL (ENSKMAG00000008992) ENSKMAG00000008954 cyp2y3 (ENSKMAG00000008879) Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a.m ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00940000156536.e.b ENSGT00390000009497.b ENSGT00940000156155 ENSGT00940000156648.c ENSGT00390000015655.a.m.a ENSGT00390000010744.m.d ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00990000204560 Pomacentridae ANCESTRAL SPECIES 116 ENSGT01030000234579.A.b.a ENSGT00890000139453.b.e.b ENSGT00940000167283.b ENSGT00940000153680.a ##14 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00940000156155 ENSGT00940000156648.c ENSGT00390000015655.a.m.a ENSGT00940000160131 ENSGT00950000183048.b.b.a.d.a.a.a.b ENSGT00950000183048.b.b.a.c.b ENSGT01030000234640.a.b.b Pomacentridae_A ANCESTRAL SPECIES 154 ENSGT01030000234579.A.b.a ENSGT00890000139453.b.e.b ENSGT00940000167283.b ENSGT00940000153680.a ##14 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00940000156155 ENSGT00940000156648.c ENSGT00390000015655.a.m.a ENSGT00940000160131 ENSGT01030000234640.b ENSGT01100000263522.B.a ENSGT00950000182887.C.a.b #21 Amphiprion ANCESTRAL SPECIES 229 ENSGT01030000234579.A.b.a ENSGT00890000139453.b.e.b ENSGT00940000167283.b ENSGT00940000153680.a ##14 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00940000153972.A.a ENSGT00530000064411.a ENSGT00390000009497.b ENSGT00940000156536.e.b ENSGT00940000156155 ENSGT00940000156648.c ENSGT00390000015655.a.m.a Orange clownfish MODERN SPECIES 23 ENSAPEG00000022420 ppp1r14ab (ENSAPEG00000022433) ENSAPEG00000022444 atg16l1 (ENSAPEG00000022482) ENSAPEG00000022576 ENSAPEG00000022626 ENSAPEG00000022647 ENSAPEG00000022663 ENSAPEG00000022690 eif4h (ENSAPEG00000022702) ENSAPEG00000022739 NYAP2 (ENSAPEG00000022749) ENSAPEG00000022756 ENSAPEG00000022774 ENSAPEG00000022798 ##14 rps3 (ENSAPEG00000022808) ##22 KCTD14 (ENSAPEG00000000327) INTS4 (ENSAPEG00000000346) aamdc (ENSAPEG00000000457) ENSAPEG00000000461 RSF1 (ENSAPEG00000000468) CAPN5 (ENSAPEG00000000475) ENSAPEG00000000533 dcun1d5 (ENSAPEG00000000566) CUL5 (ENSAPEG00000000602) SLC35F2 (ENSAPEG00000000637) ENSAPEG00000000735 abcg1 (ENSAPEG00000000892) Clown anemonefish MODERN SPECIES 895 atp1b3b (ENSAOCG00000013438) NYAP2 (ENSAOCG00000013492) ENSAOCG00000013505 ENSAOCG00000013589 rnf168 (ENSAOCG00000013609) ##14 rps3 (ENSAOCG00000013654) ##22 KCTD14 (ENSAOCG00000013663) ENSAOCG00000013683 INTS4 (ENSAOCG00000002454) aamdc (ENSAOCG00000013815) Bicolor damselfish MODERN SPECIES 658 ENSSPAG00000022070 ENSSPAG00000022081 kcnk9 (ENSSPAG00000022085) ENSSPAG00000022091 atp1b3b (ENSSPAG00000022117) NYAP2 (ENSSPAG00000022209) ENSSPAG00000022219 ENSSPAG00000022232 ##14 rps3 (ENSSPAG00000022245) ##22 KCTD14 (ENSSPAG00000022289) ENSSPAG00000022303 aamdc (ENSSPAG00000022313) Cichlidae ANCESTRAL SPECIES 35 ENSGT01040000240503.C ENSGT01100000263513.a.a.a ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163467.a.b.b.a.a.j ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a.m ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 Midas cichlid MODERN SPECIES 780 ENSACIG00000023540 rps3 (ENSACIG00000023535) ##22 Pseudocrenilabrinae ANCESTRAL SPECIES 19 ENSGT01040000240503.C ENSGT01100000263513.a.a.a ENSGT00940000159557 ENSGT01000000214804 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000163467.a.b.b.a.a.j.c.b ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a.m ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00390000009409 ENSGT00940000165978 ENSGT00940000159343 ENSGT00390000018436.b ENSGT00940000158344.a.a ENSGT00910000144115.b ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00970000193454 ENSGT00390000011810 ENSGT00940000153123.A ENSGT00940000159610 Pseudocrenilabrinae_A ANCESTRAL SPECIES 15 ENSGT00940000154629.A ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT01100000263513.a.a.a ENSGT00940000159557 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a.m ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00390000009409 ENSGT00940000165978 ENSGT00940000159343 ENSGT00390000018436.b ENSGT00940000158344.a.a ENSGT00910000144115.b ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00970000193454 ENSGT00390000011810 ENSGT00940000153123.A ENSGT00940000159610.h Haplochromini ANCESTRAL SPECIES 15 ENSGT00940000154629.A ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT01100000263513.a.a.a ENSGT00940000159557 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a.m ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00390000009409 ENSGT00940000165978 ENSGT00940000159343 ENSGT00390000018436.b ENSGT00940000158344.a.a ENSGT00910000144115.b ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00970000193454 ENSGT00390000011810 ENSGT00940000153123.A ENSGT00940000159610.h Burton s mouthbrooder MODERN SPECIES 506 si:cabz01090165.1 (ENSHBUG00000002406) ENSHBUG00000002397 ENSHBUG00000002383 ENSHBUG00000002373 rps3 (ENSHBUG00000002368) ##22 KCTD14 (ENSHBUG00000002341) ENSHBUG00000002332 INTS4 (ENSHBUG00000002318) aamdc (ENSHBUG00000002290) eif3k (ENSHBUG00000002271) zgc:85932 (ENSHBUG00000001170) ACTN4 (ENSHBUG00000002222) ENSHBUG00000002174 slc8a2b (ENSHBUG00000002082) srsf7a (ENSHBUG00000001795) hnrnpl2 (ENSHBUG00000001736) ENSHBUG00000001612 ech1 (ENSHBUG00000001601) ech1 (ENSHBUG00000001593) ENSHBUG00000001589 Haplochromini_A ANCESTRAL SPECIES 23 ENSGT00940000154629.A ENSGT00940000164418.a.a ENSGT01040000240503.C ENSGT01100000263513.a.a.a ENSGT00940000159557 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a.m ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00390000009409 ENSGT00940000165978 ENSGT00940000159343 ENSGT00390000018436.b ENSGT00940000158344.a.a ENSGT00980000198791.c ENSGT00940000163630.A.a.a ENSGT00910000144115.b ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00970000193454 ENSGT00390000011810 P. nyererei MODERN SPECIES 371 dlc (ENSPNYG00000008076) timm50 (ENSPNYG00000008018) ENSPNYG00000007827 CLIP3 (ENSPNYG00000007761) ENSPNYG00000007746 ENSPNYG00000007718 ENSPNYG00000007703 CAPNS1 (ENSPNYG00000007686) zgc:101731 (ENSPNYG00000007668) ENSPNYG00000007656 si:cabz01090165.1 (ENSPNYG00000007551) ENSPNYG00000007520 ENSPNYG00000007502 ENSPNYG00000007486 ENSPNYG00000007471 ##22 rps3 (ENSPNYG00000007419) ##22 KCTD14 (ENSPNYG00000007400) ENSPNYG00000007380 INTS4 (ENSPNYG00000007308) aamdc (ENSPNYG00000007256) eif3k (ENSPNYG00000007217) zgc:85932 (ENSPNYG00000007187) ACTN4 (ENSPNYG00000006323) ENSPNYG00000006113 slc8a2b (ENSPNYG00000006063) ENSPNYG00000006045 ENSPNYG00000006014 srsf7a (ENSPNYG00000005994) hnrnpl2 (ENSPNYG00000005642) ENSPNYG00000005569 med17 (ENSPNYG00000005525) Haplochromini_B ANCESTRAL SPECIES 27 ENSGT01040000240503.C ENSGT01100000263513.a.a.a ENSGT00940000159557 ENSGT00940000174800 ENSGT00670000099420 ENSGT00940000156844.a ENSGT00940000155478.ib ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00530000064692.B.a.a.b.a.c.a.a.b.a ENSGT00940000163467.a.b.b.a.a.j.c.b.b ENSGT00940000164973 ENSGT00940000167295 ENSGT00940000155076.b.a.a.b ENSGT00530000064359.c.a.m ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00940000174101 ENSGT00390000010128 ENSGT00390000011958 ENSGT00390000009409 ENSGT00940000165978 ENSGT00940000159343 ENSGT00390000018436.b ENSGT00940000158344.a.a ENSGT00980000198791.c ENSGT00910000144115.b ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00970000193454 ENSGT00390000011810 ENSGT00940000153123.A Eastern happy MODERN SPECIES 5 ENSACLG00000012624 zgc:162698 (ENSACLG00000012625) CAPNS1 (ENSACLG00000012651) zgc:101731 (ENSACLG00000012679) ENSACLG00000012701 ENSACLG00000012824 ENSACLG00000012904 ENSACLG00000012912 ENSACLG00000013125 ENSACLG00000013135 ENSACLG00000013139 ENSACLG00000013502 si:cabz01090165.1 (ENSACLG00000013719) ENSACLG00000013734 ENSACLG00000013759 rps3 (ENSACLG00000013763) ##22 KCTD14 (ENSACLG00000013840) ENSACLG00000013860 INTS4 (ENSACLG00000013877) aamdc (ENSACLG00000013996) ENSACLG00000014014 eif3k (ENSACLG00000014032) zgc:85932 (ENSACLG00000014125) ENSACLG00000014178 ACTN4 (ENSACLG00000014224) ENSACLG00000014416 slc8a2b (ENSACLG00000014535) ENSACLG00000014669 ENSACLG00000014692 srsf7a (ENSACLG00000014716) hnrnpl2 (ENSACLG00000014775) Zebra mbuna MODERN SPECIES 1096 ENSMZEG00005024697 ENSMZEG00005024696 zgc:162698 (ENSMZEG00005024695) CAPNS1 (ENSMZEG00005024694) zgc:101731 (ENSMZEG00005024693) ENSMZEG00005024692 ENSMZEG00005024691 ENSMZEG00005024690 ENSMZEG00005024689 ENSMZEG00005024688 ENSMZEG00005024687 si:cabz01090165.1 (ENSMZEG00005024686) ENSMZEG00005024685 ENSMZEG00005024684 ENSMZEG00005024683 rps3 (ENSMZEG00005024678) ##22 KCTD14 (ENSMZEG00005024675) ENSMZEG00005024673 INTS4 (ENSMZEG00005024671) aamdc (ENSMZEG00005024667) eif3k (ENSMZEG00005024662) zgc:85932 (ENSMZEG00005024659) ACTN4 (ENSMZEG00005024648) ENSMZEG00005024644 slc8a2b (ENSMZEG00005024639) ENSMZEG00005024632 srsf7a (ENSMZEG00005024627) hnrnpl2 (ENSMZEG00005024585) ENSMZEG00005024576 med17 (ENSMZEG00005024570) ech1 (ENSMZEG00005024557) Lyretail cichlid MODERN SPECIES 368 PARL (ENSNBRG00000005735) cldn15lb (ENSNBRG00000005770) chp2 (ENSNBRG00000005786) dlc (ENSNBRG00000005845) timm50 (ENSNBRG00000005950) ENSNBRG00000005975 CLIP3 (ENSNBRG00000006047) ENSNBRG00000006075 ENSNBRG00000006102 ENSNBRG00000006109 zgc:101731 (ENSNBRG00000006126) zgc:113149 (ENSNBRG00000006152) si:cabz01090165.1 (ENSNBRG00000006172) zgc:171927 (ENSNBRG00000006202) ENSNBRG00000006231 rps3 (ENSNBRG00000006241) ##22 ENSNBRG00000006296 aamdc (ENSNBRG00000006316) eif3k (ENSNBRG00000006334) zgc:85932 (ENSNBRG00000006354) ACTN4 (ENSNBRG00000006390) ENSNBRG00000006460 ENSNBRG00000006487 ENSNBRG00000006537 ENSNBRG00000006582 srsf7a (ENSNBRG00000006601) hnrnpl2 (ENSNBRG00000006628) ENSNBRG00000006685 med17 (ENSNBRG00000006703) ech1 (ENSNBRG00000006754) Otomorpha ANCESTRAL SPECIES 58 ENSGT00390000017913 ENSGT00940000160751 ENSGT00940000161641 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.a.i ENSGT00390000009497.b ENSGT00940000156155 ENSGT00730000111053 ENSGT00940000161729.m.b ENSGT00940000157384.b Clupeiformes ANCESTRAL SPECIES 59 ENSGT00940000158168 ENSGT00390000017913 ENSGT00940000160751 ENSGT00940000161641 ENSGT00940000167407 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00390000009497.b ENSGT00940000156536.e.a.i ENSGT00940000166445 ENSGT00390000007046.b.a.b ENSGT00390000012368 ENSGT00940000160033.c Atlantic herring MODERN SPECIES 25 dhrs11b.1 (ENSCHAG00000017281) rab34a (ENSCHAG00000017211) tlcd1 (ENSCHAG00000017206) nek8 (ENSCHAG00000017148) traf4a (ENSCHAG00000017100) ENSCHAG00000017068 ENSCHAG00000017054 SAMD4B (ENSCHAG00000016717) zgc:172323 (ENSCHAG00000016645) ENSCHAG00000016638 zgc:172323 (ENSCHAG00000016570) zgc:172323 (ENSCHAG00000016487) zgc:172323 (ENSCHAG00000016429) GMFG (ENSCHAG00000016414) paf1 (ENSCHAG00000015847) rps3 (ENSCHAG00000015551) ##22 KCTD14 (ENSCHAG00000015537) INTS4 (ENSCHAG00000014647) aamdc (ENSCHAG00000014623) RSF1 (ENSCHAG00000014555) clns1a (ENSCHAG00000014547) aqp11 (ENSCHAG00000014540) pak1 (ENSCHAG00000014021) ENSCHAG00000013967 GDPD4 (ENSCHAG00000013956) myo7aa (ENSCHAG00000009132) ompa (ENSCHAG00000008985) capn5a (ENSCHAG00000008755) ENSCHAG00000008734 snrpa (ENSCHAG00000008709) zgc:153119 (ENSCHAG00000008699) Denticle herring MODERN SPECIES 10 pdcd10a (ENSDCDG00000033772) ENSDCDG00000033768 WDR49 (ENSDCDG00000033761) ENSDCDG00000033755 ENSDCDG00000031418 SLITRK3 (ENSDCDG00000031263) ENSDCDG00000031261 ENSDCDG00000031259 fam168a (ENSDCDG00000031256) P2RY6 (ENSDCDG00000031254) ARHGEF17 (ENSDCDG00000031247) relt (ENSDCDG00000031237) P2RY2 (ENSDCDG00000031234) FCHSD2 (ENSDCDG00000030668) ENSDCDG00000030648 rps3 (ENSDCDG00000030642) ##22 KCTD14 (ENSDCDG00000030639) aamdc (ENSDCDG00000030638) INTS4 (ENSDCDG00000030636) ENSDCDG00000030635 clns1a (ENSDCDG00000030632) aqp11 (ENSDCDG00000030631) pak1 (ENSDCDG00000029768) GDPD4 (ENSDCDG00000029741) myo7aa (ENSDCDG00000028451) ompa (ENSDCDG00000028404) capn5a (ENSDCDG00000027848) ENSDCDG00000027809 snrpa (ENSDCDG00000027805) zgc:153119 (ENSDCDG00000027799) itpkcb (ENSDCDG00000027789) Otophysi ANCESTRAL SPECIES 134 ENSGT00940000158168 ENSGT00390000017913 ENSGT00940000160751 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.a.i ENSGT00390000009497.b ENSGT00940000180202 ENSGT00940000156155 ENSGT00730000111053 ENSGT00940000161729.m.b.e.b Characiphysae ANCESTRAL SPECIES 66 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.a.i ENSGT00390000009497.b ENSGT00940000180202 ENSGT00940000156155 ENSGT00730000111053 ENSGT00940000161729.m.b.e.b Characiphysae_b ANCESTRAL SPECIES 72 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157637.a ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.a.i ENSGT00390000009497.b ENSGT00940000180202 ENSGT00940000156155 ENSGT00730000111053 ENSGT00940000161729.m.b.e.b Characoidei ANCESTRAL SPECIES 76 ENSGT00940000157637.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00940000156536.e.a.i ENSGT00390000009497.b ENSGT00940000180202 ENSGT00940000156155 ENSGT00730000111053 ENSGT00940000161729.m.b.e.b Mexicana tetra MODERN SPECIES 115 ENSAMXG00000006793 ENSAMXG00000029930 ENSAMXG00000013543 P2RY6 (ENSAMXG00000026325) ARHGEF17 (ENSAMXG00000013562) relt (ENSAMXG00000033275) P2RY2 (ENSAMXG00000040207) FCHSD2 (ENSAMXG00000013591) ENSAMXG00000036448 ENSAMXG00000043130 rps3 (ENSAMXG00000013642) ##22 KCTD14 (ENSAMXG00000030590) ENSAMXG00000043500 INTS4 (ENSAMXG00000013679) aamdc (ENSAMXG00000013718) RSF1 (ENSAMXG00000013740) clns1a (ENSAMXG00000013761) aqp11 (ENSAMXG00000031970) pak1 (ENSAMXG00000013796) GDPD4 (ENSAMXG00000013818) ENSAMXG00000030631 capn5a (ENSAMXG00000013893) ompa (ENSAMXG00000026326) dcun1d5 (ENSAMXG00000013901) eif2a (ENSAMXG00000013924) serp1 (ENSAMXG00000042435) Red-bellied piranha MODERN SPECIES 98 arpc5a (ENSPNAG00000019051) ENSPNAG00000019031 ENSPNAG00000019024 ENSPNAG00000019017 ENSPNAG00000019005 ENSPNAG00000018995 ENSPNAG00000018977 ENSPNAG00000018960 ENSPNAG00000018929 P2RY6 (ENSPNAG00000018920) ARHGEF17 (ENSPNAG00000018902) relt (ENSPNAG00000018870) P2RY2 (ENSPNAG00000018838) FCHSD2 (ENSPNAG00000018820) ENSPNAG00000018673 rps3 (ENSPNAG00000018641) ##22 KCTD14 (ENSPNAG00000018601) INTS4 (ENSPNAG00000018579) aamdc (ENSPNAG00000018443) RSF1 (ENSPNAG00000018419) clns1a (ENSPNAG00000018394) aqp11 (ENSPNAG00000018325) pak1 (ENSPNAG00000018299) GDPD4 (ENSPNAG00000018223) ENSPNAG00000018200 myo7aa (ENSPNAG00000018151) Channel catfish MODERN SPECIES 23 ENSIPUG00000005203 ENSIPUG00000005257 ENSIPUG00000005272 ENSIPUG00000005303 ENSIPUG00000005358 SLITRK3 (ENSIPUG00000005376) ENSIPUG00000005392 ENSIPUG00000005416 P2RY3 (ENSIPUG00000005431) arhgef17 (ENSIPUG00000005456) relt (ENSIPUG00000005497) P2RY2 (ENSIPUG00000005517) P2RY2 (ENSIPUG00000005544) fchsd2 (ENSIPUG00000005570) ENSIPUG00000005660 rps3 (ENSIPUG00000005685) ##22 KCTD14 (ENSIPUG00000005769) ints4 (ENSIPUG00000005782) aamdc (ENSIPUG00000005882) RSF1 (ENSIPUG00000005914) clns1a (ENSIPUG00000005935) aqp11 (ENSIPUG00000005985) pak1 (ENSIPUG00000006002) ENSIPUG00000006039 tat (ENSIPUG00000006050) zgc:56622 (ENSIPUG00000006082) klhl36 (ENSIPUG00000006104) COTL1 (ENSIPUG00000006136) tldc1 (ENSIPUG00000006165) PLCG2 (ENSIPUG00000006196) cmip (ENSIPUG00000006302) Cyprinoidei ANCESTRAL SPECIES 138 ENSGT00960000186767 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681.a ENSGT00940000157023 ENSGT00940000157637.a ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B ENSGT00940000160350 ENSGT01030000234621.C.a.a.b.h ENSGT01030000234621.C.a.a.b.g ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a ENSGT00940000156251.a.a ENSGT00940000155350.g ENSGT00940000156536.e.a.i ENSGT00390000009497.b ENSGT00940000180202 ENSGT00940000156155 ENSGT00730000111053 ENSGT00940000161729.m.b.e.b Zebrafish MODERN SPECIES 9 dnaaf4 (ENSDARG00000099161) ccpg1 (ENSDARG00000104126) pigb (ENSDARG00000105011) pigbos1 (ENSDARG00000115717) rab27a (ENSDARG00000103935) ENSDARG00000112435 ENSDARG00000110183 P2RY2 (ENSDARG00000099915) P2RY2 (ENSDARG00000104927) P2RY2 (ENSDARG00000104425) relt (ENSDARG00000099724) ARHGEF17 (ENSDARG00000101644) fam168a (ENSDARG00000098832) ENSDARG00000111693 ENSDARG00000098597 rps3 (ENSDARG00000103007) ##22 KCTD14 (ENSDARG00000110240) INTS4 (ENSDARG00000102953) aamdc (ENSDARG00000103957) clns1a (ENSDARG00000103027) aqp11 (ENSDARG00000100555) pak1 (ENSDARG00000103959) GDPD4 (ENSDARG00000102447) myo7aa (ENSDARG00000099871) capn5a (ENSDARG00000103317) ompa (ENSDARG00000105218) ENSDARG00000101159 dcun1d5 (ENSDARG00000100363) eif2a (ENSDARG00000101061) ENSDARG00000111944 serp1 (ENSDARG00000099439) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 243 ENSGT00940000160350.h ENSGT01030000234621.C.a.a.b.h.b ENSGT00510000046732.A.d.a ENSGT00390000008610.a.a.c.a ##22 ENSGT00390000010128.y ENSGT00390000011958.u ENSGT00530000064411.a.b ENSGT00390000010063.qb.a ENSGT00530000063816.c.b.a ENSGT00950000182988.a.b.a.d ENSGT00940000156251.a.a.a ENSGT00940000166878 ENSGT00940000155350.g ENSGT00390000009497.b ENSGT00940000156536.e.a.i.b ENSGT00940000156155.j ENSGT00730000111053 ENSGT00940000161729.m.b.e.b ENSGT00940000158330.w Cyprininae_a ANCESTRAL SPECIES 70 ENSGT00940000158168.k ENSGT00390000017913.r.a.a ENSGT00940000167407 ENSGT00960000186767.b ENSGT00940000163043 ENSGT00940000164162.i.a ENSGT00940000158681.a.f ENSGT00940000178700 ENSGT00940000157637.a.b ENSGT00390000005140.a.b ENSGT01030000234621.C.a.b.b ENSGT00940000153798.B.j ENSGT00940000160350.h ENSGT01030000234621.C.a.a.b.h.b ENSGT00510000046732.A.d.a ENSGT00390000008610.a.a.c.a ##22 ENSGT00390000010128.y ENSGT00390000011958.u ENSGT00530000064411.a.b ENSGT00390000010063.qb.a ENSGT00530000063816.c.b.a ENSGT00950000182988.a.b.a.d ENSGT00940000156251.a.a.a ENSGT00940000155350.g ENSGT00390000009497.b ENSGT00940000156536.e.a.i.b ENSGT00940000156155.j ENSGT00730000111053 ENSGT00940000162467.a.a ENSGT00940000158330.w ENSGT00390000010760.e.b.d.b.a Common carp reference MODERN SPECIES 9 serpini1 (ENSCCRG00000072151) pdcd10a (ENSCCRG00000021528) ENSCCRG00000064919 ENSCCRG00000012337 ENSCCRG00000063368 ENSCCRG00000064077 ENSCCRG00000058092 ENSCCRG00000069648 P2RY6 (ENSCCRG00000063902) ARHGEF17 (ENSCCRG00000082091) ENSCCRG00000051351 relt (ENSCCRG00000067376) ENSCCRG00000079795 ENSCCRG00000076272 ENSCCRG00000018454 rps3 (ENSCCRG00000018292) ##22 INTS4 (ENSCCRG00000016334) aamdc (ENSCCRG00000058236) RSF1 (ENSCCRG00000063602) clns1a (ENSCCRG00000018899) aqp11 (ENSCCRG00000021499) pak1 (ENSCCRG00000053253) GDPD4 (ENSCCRG00000037451) myo7aa (ENSCCRG00000067841) ompa (ENSCCRG00000063471) capn5a (ENSCCRG00000045407) dcun1d5 (ENSCCRG00000038840) eif2a (ENSCCRG00000038858) ENSCCRG00000038868 ENSCCRG00000038888 ENSCCRG00000039023 Goldfish MODERN SPECIES 65 FCHSD2 (ENSCARG00000067341) rps3 (ENSCARG00000067297) ##22 aamdc (ENSCARG00000067278) ENSCARG00000067268 Cyprininae ANCESTRAL SPECIES ENSGT00390000008610.a.a.c.b ##22 Goldfish MODERN SPECIES 336 fam168a (ENSCARG00000040062) P2RY6 (ENSCARG00000040055) ARHGEF17 (ENSCARG00000039710) relt (ENSCARG00000039682) P2RY2 (ENSCARG00000039671) P2RY2 (ENSCARG00000040746) FCHSD2 (ENSCARG00000040241) rps3 (ENSCARG00000040121) ##22 aamdc (ENSCARG00000040107) RSF1 (ENSCARG00000040091) clns1a (ENSCARG00000039937) aqp11 (ENSCARG00000039927) Cyprininae_a ANCESTRAL SPECIES ENSGT00390000008610.a.a.c.b ##22 Common carp reference MODERN SPECIES 19 ENSCCRG00000055000 serpini1 (ENSCCRG00000021656) pdcd10a (ENSCCRG00000065451) ENSCCRG00000044984 ENSCCRG00000052217 ENSCCRG00000058594 ENSCCRG00000058914 ENSCCRG00000082068 P2RY6 (ENSCCRG00000072292) ENSCCRG00000021502 relt (ENSCCRG00000021521) ENSCCRG00000048135 ENSCCRG00000074022 ENSCCRG00000077876 ENSCCRG00000018459 rps3 (ENSCCRG00000018907) ##22 INTS4 (ENSCCRG00000018932) aamdc (ENSCCRG00000018471) RSF1 (ENSCCRG00000054713) clns1a (ENSCCRG00000067103) aqp11 (ENSCCRG00000076976) pak1 (ENSCCRG00000025855) ENSCCRG00000073550 nptnb (ENSCCRG00000002739) PEPD (ENSCCRG00000079116) CHST8 (ENSCCRG00000074768) KCTD15 (ENSCCRG00000082235) ENSCCRG00000049526 lsm14ab (ENSCCRG00000049558) ENSCCRG00000049696 gpib (ENSCCRG00000049335) Cyprininae ANCESTRAL SPECIES 337 ENSGT00390000005140.a.a ENSGT01030000234621.C.a.b.a ENSGT00940000153798.B ENSGT00940000160350.g ENSGT01030000234621.C.a.a.b.h.a ENSGT01030000234621.C.a.a.b.g ENSGT00510000046732.A.d.b ENSGT00940000165320 ENSGT00390000008610.a.a.d ##22 ENSGT00940000160762 ENSGT00390000010128.z ENSGT00390000011958.v ENSGT00530000064411.a.a ENSGT00390000010063.rb ENSGT00530000063816.c.b.b ENSGT00950000182988.a.b.a.c ENSGT00940000154743.B.o.a.h ENSGT00940000156195.q.b.h ENSGT00940000159100.g.e.a ENSGT00940000159496.k.d.b ENSGT00940000154415.lb.a.a.a ENSGT00390000003210.d ENSGT00390000000707.y.b.a ENSGT00940000160924.d Goldfish MODERN SPECIES 9 RGS9BP (ENSCARG00000014733) zdhhc7 (ENSCARG00000014725) nip7 (ENSCARG00000014713) cog8 (ENSCARG00000014698) ENSCARG00000014553 WDR59 (ENSCARG00000013614) glg1b (ENSCARG00000013064) fam168a (ENSCARG00000012987) P2RY6 (ENSCARG00000012976) ARHGEF17 (ENSCARG00000012944) relt (ENSCARG00000012935) P2RY2 (ENSCARG00000012931) P2RY2 (ENSCARG00000012926) FCHSD2 (ENSCARG00000011798) ENSCARG00000011707 ENSCARG00000011615 ##22 KCTD14 (ENSCARG00000011600) INTS4 (ENSCARG00000010795) aamdc (ENSCARG00000010749) RSF1 (ENSCARG00000010736) clns1a (ENSCARG00000010708) aqp11 (ENSCARG00000010698) ENSCARG00000010691 pak1 (ENSCARG00000010506) nptnb (ENSCARG00000010456) ENSCARG00000010229 CHST8 (ENSCARG00000010190) KCTD15 (ENSCARG00000010178) ENSCARG00000010168 lsm14ab (ENSCARG00000010099) GARRE1 (ENSCARG00000010023) Cyprininae_a ANCESTRAL SPECIES 25 ENSGT00390000015980.c ENSGT00940000158168.l ENSGT00390000017913.r.a.b ENSGT00960000186767.a ENSGT00940000164162.i.b ENSGT00940000158681.a.e ENSGT00940000157637.a.a ENSGT00390000005140.a.a ENSGT01030000234621.C.a.b.a ENSGT00940000153798.B.i ENSGT00940000160350.g ENSGT01030000234621.C.a.a.b.h.a ENSGT01030000234621.C.a.a.b.g ENSGT00510000046732.A.d.b ENSGT00940000165320 ENSGT00390000008610.a.a.d ##22 ENSGT00940000160762 ENSGT00390000010128.z ENSGT00390000011958.v ENSGT00530000064411.a.a ENSGT00390000010063.rb ENSGT00530000063816.c.b.b ENSGT00950000182988.a.b.a.c ENSGT00940000154743.B.o.a.h ENSGT00940000156195.q.b.h ENSGT00940000159100.g.e.a ENSGT00940000159496.k.d.b ENSGT00940000154415.lb.a.a.a ENSGT00390000003210.d ENSGT00390000000707.y.b.a ENSGT00940000160924.d Golden-line barbel MODERN SPECIES 181 fam168a (ENSSGRG00000045914) P2RY6 (ENSSGRG00000045916) ENSSGRG00000045917 ARHGEF17 (ENSSGRG00000045918) relt (ENSSGRG00000045919) P2RY2 (ENSSGRG00000045920) P2RY2 (ENSSGRG00000045921) FCHSD2 (ENSSGRG00000045924) ENSSGRG00000045979 rps3 (ENSSGRG00000045989) ##22 KCTD14 (ENSSGRG00000046043) INTS4 (ENSSGRG00000046050) aamdc (ENSSGRG00000046192) RSF1 (ENSSGRG00000046193) clns1a (ENSSGRG00000046196) aqp11 (ENSSGRG00000046199) pak1 (ENSSGRG00000046226) ENSSGRG00000047932 nptnb (ENSSGRG00000047934) ugt5f1 (ENSSGRG00000047935) pepd (ENSSGRG00000047937) CHST8 (ENSSGRG00000047938) KCTD15 (ENSSGRG00000047940) ENSSGRG00000047943 lsm14ab (ENSSGRG00000047947) Osteoglossiformes ANCESTRAL SPECIES 14 ENSGT00940000158168 ENSGT00390000017913 ENSGT00940000160751 ENSGT00940000167407 ENSGT00940000163043 ENSGT00940000164162 ENSGT00940000158681 ENSGT00940000157637.a ENSGT00390000005140.a.s ENSGT01030000234621.C.a.b ENSGT00940000153798.B ENSGT01030000234621.C.a.a.b ENSGT00940000160350 ENSGT00510000046732.A.c ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000160762 ENSGT00390000010128 ENSGT00390000011958 ENSGT00530000064411.a ENSGT00390000010063 ENSGT00530000063816.c.b ENSGT00950000182988.a.b.a.a ENSGT00940000156251.a ENSGT00940000155350.g ENSGT00390000009497 ENSGT00940000156155.m ENSGT00940000156648.a.b ENSGT00940000159782.b ENSGT00390000015655.a.m.a ENSGT00940000158415 P. kingsleyae MODERN SPECIES 46 pdcd10b (ENSPKIG00000024386) WDR49 (ENSPKIG00000024303) ENSPKIG00000024255 ENSPKIG00000024216 ENSPKIG00000024202 SLITRK3 (ENSPKIG00000024192) ENSPKIG00000024183 fam168a (ENSPKIG00000024158) P2RY6 (ENSPKIG00000024152) ARHGEF17 (ENSPKIG00000024134) P2RY2 (ENSPKIG00000024120) relt (ENSPKIG00000024107) FCHSD2 (ENSPKIG00000024091) ENSPKIG00000024081 KCTD14 (ENSPKIG00000024063) rps3 (ENSPKIG00000024046) ##22 INTS4 (ENSPKIG00000024017) aamdc (ENSPKIG00000024002) RSF1 (ENSPKIG00000023983) clns1a (ENSPKIG00000023965) aqp11 (ENSPKIG00000023955) pak1 (ENSPKIG00000023941) GDPD4 (ENSPKIG00000023910) myo7aa (ENSPKIG00000023866) ompa (ENSPKIG00000023839) CAPN5 (ENSPKIG00000023819) ENSPKIG00000023806 dcun1d5 (ENSPKIG00000023773) CUL5 (ENSPKIG00000023730) SLC35F2 (ENSPKIG00000023710) KBTBD3 (ENSPKIG00000023695) Asian bonytongue MODERN SPECIES 1 ENSSFOG00015001879 ENSSFOG00015032645 serpini1 (ENSSFOG00015001922) pdcd10b (ENSSFOG00015032682) WDR49 (ENSSFOG00015001998) ENSSFOG00015002069 ENSSFOG00015002099 ENSSFOG00015002120 ENSSFOG00015002162 fam168a (ENSSFOG00015031466) P2RY6 (ENSSFOG00015033260) ARHGEF17 (ENSSFOG00015027586) relt (ENSSFOG00015031194) FCHSD2 (ENSSFOG00015002267) ENSSFOG00015002286 rps3 (ENSSFOG00015002290) ##22 KCTD14 (ENSSFOG00015002323) INTS4 (ENSSFOG00015002354) aamdc (ENSSFOG00015029619) RSF1 (ENSSFOG00015002501) clns1a (ENSSFOG00015002589) aqp11 (ENSSFOG00015032092) pak1 (ENSSFOG00015002635) GDPD4 (ENSSFOG00015002682) myo7aa (ENSSFOG00015002698) CAPN5 (ENSSFOG00015002892) ompa (ENSSFOG00015024542) ENSSFOG00015002972 dcun1d5 (ENSSFOG00015002982) ENSSFOG00015003009 elmod1 (ENSSFOG00015003065) Sarcopterygii ANCESTRAL SPECIES 177 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000012955 ENSGT00940000154769 ENSGT00510000047611 ENSGT00940000157424 ENSGT00940000159817 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 Coelacanth MODERN SPECIES 2648 ENSLACG00000002504 ENSLACG00000005352 rps3 (ENSLACG00000006132) ##22 SERPINH1 (ENSLACG00000006746) #26 Tetrapoda ANCESTRAL SPECIES 146 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 Anura ANCESTRAL SPECIES 217 ENSGT01030000234621.C.a.a.b.c ENSGT01030000234621.C.a.b ENSGT00940000153798.B ENSGT00940000160350 ENSGT00390000005140.b.a ENSGT00390000013989.b ENSGT00940000154769 ENSGT00390000012955 ENSGT00390000008503 ENSGT00390000005948 ENSGT01030000234621.C.a.a.b.d ENSGT00510000046732.A ENSGT00940000165320 ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 Frog MODERN SPECIES 2 ENSXETG00000030113 lrrc32.1 (ENSXETG00000019430) emsy (ENSXETG00000019422) #33 wnt11 (ENSXETG00000019408) #31 ENSXETG00000046732 uvrag (ENSXETG00000015063) #30 dgat2 (ENSXETG00000025317) #29 mogat2.2 (ENSXETG00000015062) #28 map6 (ENSXETG00000015061) #27 ENSXETG00000025318 ENSXETG00000044887 gdpd5 (ENSXETG00000015053) #24 ENSXETG00000036724 fchsd2 (ENSXETG00000010734) ENSXETG00000010732 rps3 (ENSXETG00000010729) ##22 ENSXETG00000010725 #26 p2ry2 (ENSXETG00000039207) myo7a (ENSXETG00000010706) XB877238 [provisional:gdpd5] (ENSXETG00000046669) pak1 (ENSXETG00000010703) aqp11 (ENSXETG00000030889) picalm (ENSXETG00000032563) ENSXETG00000042352 CCDC83 (ENSXETG00000010700) sytl2 (ENSXETG00000012793) ENSXETG00000045431 CREBZF (ENSXETG00000037796) tmem126a (ENSXETG00000012738) ENSXETG00000038687 ENSXETG00000041747 Amniota ANCESTRAL SPECIES ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000156536 Sauria ANCESTRAL SPECIES 2 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT00960000190120 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000162032 ENSGT00940000156796.l ENSGT00940000161510 ENSGT00940000161326 Archelosauria ANCESTRAL SPECIES ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT00960000190120 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000161326 ENSGT00610000086191 ENSGT00940000153761.A ENSGT00940000159306 Archosauria ANCESTRAL SPECIES 2 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT00960000190120 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000161326 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Australian saltwater crocodile MODERN SPECIES 27 UCP3 (ENSCPRG00005017577) UCP2 (ENSCPRG00005017576) DNAJB13 (ENSCPRG00005017575) PAAF1 (ENSCPRG00005017560) COA4 (ENSCPRG00005017556) MRPL48 (ENSCPRG00005017547) RAB6A (ENSCPRG00005017541) PLEKHB1 (ENSCPRG00005017535) FAM168A (ENSCPRG00005017532) RELT (ENSCPRG00005017525) ARHGEF17 (ENSCPRG00005017464) P2RY6 (ENSCPRG00005017444) ENSCPRG00005017441 P2RY2 (ENSCPRG00005017440) FCHSD2 (ENSCPRG00005017432) ENSCPRG00005017417 ##22 SERPINH1 (ENSCPRG00005017413) #26 GDPD5 (ENSCPRG00005017406) #25 KLHL35 (ENSCPRG00005017403) #24 MOGAT2 (ENSCPRG00005017392) #28 DGAT2 (ENSCPRG00005017383) #29 ENSCPRG00005017380 NUP98 (ENSCPRG00005017126) PGAP2 (ENSCPRG00005017057) RHOG (ENSCPRG00005017054) STIM1 (ENSCPRG00005017045) RRM1 (ENSCPRG00005017035) ENSCPRG00005017029 OR52M1 (ENSCPRG00005017028) ENSCPRG00005017024 ENSCPRG00005017020 Aves ANCESTRAL SPECIES 33 ENSGT00390000004396 #7 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000156536 African ostrich MODERN SPECIES 421 P2RY6 (ENSSCUG00000008892) P2RY2 (ENSSCUG00000008891) FCHSD2 (ENSSCUG00000008882) ENSSCUG00000008868 ##22 SERPINH1 (ENSSCUG00000008864) #26 Neognathae ANCESTRAL SPECIES 1 ENSGT00390000004396 #7 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000156536 Galloanserae ANCESTRAL SPECIES 1 ENSGT00390000004396 #7 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554.l #33 ENSGT00940000163623 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000156536 Anatidae ANCESTRAL SPECIES 64 ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554.l #33 ENSGT00940000163623 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000156536 Pink-footed goose MODERN SPECIES 186 FCHSD2 (ENSABRG00000015175) ENSABRG00000015180 ##22 SERPINH1 (ENSABRG00000015194) #26 GDPD5 (ENSABRG00000015196) #25 KLHL35 (ENSABRG00000015201) #24 MAP6 (ENSABRG00000015204) #27 MOGAT2 (ENSABRG00000015205) #28 DGAT2 (ENSABRG00000015210) #29 UVRAG (ENSABRG00000015221) #30 WNT11 (ENSABRG00000015235) #31 THAP12 (ENSABRG00000015250) #32 EMSY (ENSABRG00000015259) #33 ENSABRG00000015276 ENSABRG00000015280 TSKU (ENSABRG00000015301) #35 ACER3 (ENSABRG00000015304) #36 CAPN5 (ENSABRG00000015308) Duck MODERN SPECIES UFM1 (ENSAPLG00000030396) FAM181B (ENSAPLG00000030157) ENSAPLG00000022867 PRCP (ENSAPLG00000012966) ENSAPLG00000020064 RAB30 (ENSAPLG00000019842) ENSAPLG00000017312 CCDC89 (ENSAPLG00000011655) ENSAPLG00000011673 CCDC83 (ENSAPLG00000012173) PICALM (ENSAPLG00000012265) EED (ENSAPLG00000012886) HIKESHI (ENSAPLG00000018234) ENSAPLG00000021685 FCHSD2 (ENSAPLG00000014854) ENSAPLG00000014513 ##22 SERPINH1 (ENSAPLG00000014348) #26 ENSAPLG00000025890 GDPD5 (ENSAPLG00000011999) #25 ENSAPLG00000021295 #24 MAP6 (ENSAPLG00000029565) #27 MOGAT2 (ENSAPLG00000011246) #28 DGAT2 (ENSAPLG00000011172) #29 UVRAG (ENSAPLG00000010570) #30 WNT11 (ENSAPLG00000010439) #31 THAP12 (ENSAPLG00000010379) #32 EMSY (ENSAPLG00000010078) #33 ENSAPLG00000009988 ENSAPLG00000009760 TSKU (ENSAPLG00000001790) #35 ACER3 (ENSAPLG00000009659) #36 Phasianidae ANCESTRAL SPECIES ENSGT00390000004396 #7 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00550000074799 ENSGT00510000047299 ENSGT00940000155158 ENSGT00390000000214.a.a ENSGT00940000165269 ENSGT00910000144246 ENSGT01090000260013.b.b ENSGT01100000263528.A.b.b ENSGT01090000259999.F Phasianidae_b ANCESTRAL SPECIES ENSGT00940000158967 #8 ENSGT00390000004396 #7 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT01030000234601.c.a.a.h.a ENSGT00550000074799 ENSGT00510000047299 ENSGT00940000155158 ENSGT00390000000214.a.a ENSGT00940000165269 ENSGT00910000144246 ENSGT01090000260013.b.b ENSGT01100000263528.A.b.b Chicken MODERN SPECIES PPME1 (ENSGALG00010002478) #7 C2CD3 (ENSGALG00010002507) DNAJB13 (ENSGALG00010002523) UCP3 (ENSGALG00010002543) PAAF1 (ENSGALG00010002561) COA4 (ENSGALG00010002567) MRPL48 (ENSGALG00010002577) RAB6A (ENSGALG00010002619) FAM168A (ENSGALG00010002647) PLEKHB1 (ENSGALG00010002681) RELT (ENSGALG00010002707) ENSGALG00010002719 P2RY6 (ENSGALG00010002807) P2RY2 (ENSGALG00010002878) FCHSD2 (ENSGALG00010002894) RPS3 (ENSGALG00010002912) ##22 SERPINH1 (ENSGALG00010002923) #26 GDPD5 (ENSGALG00010002946) #25 KLHL35 (ENSGALG00010002981) #24 MAP6 (ENSGALG00010003001) #27 MOGAT2 (ENSGALG00010003018) #28 DGAT2 (ENSGALG00010003035) #29 ART1L3 (ENSGALG00010003051) ENSGALG00010003092 ENSGALG00010003109 CHRNA10 (ENSGALG00010003114) NUP98 (ENSGALG00010003136) PGAP2 (ENSGALG00010003166) RHOG (ENSGALG00010003187) STIM1 (ENSGALG00010003229) ENSGALG00010003234 Japanese quail MODERN SPECIES PPME1 (ENSCJPG00005006442) #7 C2CD3 (ENSCJPG00005006424) UCP3 (ENSCJPG00005006418) PAAF1 (ENSCJPG00005006417) COA4 (ENSCJPG00005006416) MRPL48 (ENSCJPG00005006415) RAB6A (ENSCJPG00005006414) PLEKHB1 (ENSCJPG00005006365) FAM168A (ENSCJPG00005006354) RELT (ENSCJPG00005006338) ARHGEF17 (ENSCJPG00005006203) P2RY6 (ENSCJPG00005006202) P2RY2 (ENSCJPG00005006201) FCHSD2 (ENSCJPG00005005914) ENSCJPG00005005860 ENSCJPG00005005857 ##22 SERPINH1 (ENSCJPG00005005853) #26 ENSCJPG00005005851 GDPD5 (ENSCJPG00005005849) #25 KLHL35 (ENSCJPG00005005731) #24 MAP6 (ENSCJPG00005005729) #27 MOGAT2 (ENSCJPG00005005728) #28 DGAT2 (ENSCJPG00005005723) #29 ENSCJPG00005005721 ENSCJPG00005005717 NUP98 (ENSCJPG00005005712) PGAP2 (ENSCJPG00005005697) RHOG (ENSCJPG00005005696) STIM1 (ENSCJPG00005005690) ENSCJPG00005005675 RRM1 (ENSCJPG00005005673) Neognathae_b ANCESTRAL SPECIES ENSGT00390000004396 #7 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00960000189555 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Neognathae_c ANCESTRAL SPECIES 11 ENSGT00390000004396 #7 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00960000189555 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Golden eagle MODERN SPECIES 10 ENSACCG00020009709 C2CD3 (ENSACCG00020009627) UCP3 (ENSACCG00020009478) DNAJB13 (ENSACCG00020009453) PAAF1 (ENSACCG00020009437) ENSACCG00020009427 MRPL48 (ENSACCG00020009413) RAB6A (ENSACCG00020009400) PLEKHB1 (ENSACCG00020010723) FAM168A (ENSACCG00020010712) RELT (ENSACCG00020010700) ARHGEF17 (ENSACCG00020010601) P2RY6 (ENSACCG00020010516) P2RY2 (ENSACCG00020010507) FCHSD2 (ENSACCG00020010453) ENSACCG00020010355 ##22 SERPINH1 (ENSACCG00020010344) #26 GDPD5 (ENSACCG00020010318) #25 KLHL35 (ENSACCG00020010295) #24 MAP6 (ENSACCG00020010276) #27 MOGAT2 (ENSACCG00020010260) #28 DGAT2 (ENSACCG00020010246) #29 UVRAG (ENSACCG00020010234) #30 WNT11 (ENSACCG00020010218) #31 THAP12 (ENSACCG00020010205) #32 EMSY (ENSACCG00020010145) #33 ENSACCG00020010032 ENSACCG00020010023 ENSACCG00020010011 TSKU (ENSACCG00020009994) #35 ACER3 (ENSACCG00020009979) #36 Kakapo MODERN SPECIES 11 PPME1 (ENSSHBG00005019821) #7 C2CD3 (ENSSHBG00005019807) UCP3 (ENSSHBG00005019797) DNAJB13 (ENSSHBG00005019793) PAAF1 (ENSSHBG00005019789) COA4 (ENSSHBG00005019785) MRPL48 (ENSSHBG00005019782) RAB6A (ENSSHBG00005019775) PLEKHB1 (ENSSHBG00005019765) FAM168A (ENSSHBG00005019759) RELT (ENSSHBG00005019752) ARHGEF17 (ENSSHBG00005019686) P2RY6 (ENSSHBG00005019665) P2RY2 (ENSSHBG00005019661) FCHSD2 (ENSSHBG00005019640) ENSSHBG00005019627 ##22 SERPINH1 (ENSSHBG00005019623) #26 ENSSHBG00005019620 GDPD5 (ENSSHBG00005019616) #25 KLHL35 (ENSSHBG00005019611) #24 MAP6 (ENSSHBG00005019609) #27 MOGAT2 (ENSSHBG00005019607) #28 DGAT2 (ENSSHBG00005019605) #29 UVRAG (ENSSHBG00005019598) #30 WNT11 (ENSSHBG00005019592) #31 THAP12 (ENSSHBG00005019587) #32 EMSY (ENSSHBG00005019574) #33 ENSSHBG00005019566 ENSSHBG00005019563 ENSSHBG00005019561 ENSSHBG00005019559 Passeriformes ANCESTRAL SPECIES 24 ENSGT00940000155551 ENSGT00530000063946.a ENSGT00940000161070 ENSGT00940000158090 ENSGT00390000005948 ENSGT00960000187460 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00960000189555 ENSGT00940000159690 #25 ENSGT00940000156815 ENSGT00940000159090 ENSGT00390000013073 ENSGT00390000017898 ENSGT00950000183034.A ENSGT00390000000367 ENSGT00940000157088 ENSGT00940000154035.b ENSGT00940000156365 ENSGT01050000244948.c.a ENSGT00940000153665.b.a.a ENSGT00940000154490.b Great tit MODERN SPECIES SOD1 (ENSPMJG00000001552) ENSPMJG00000001545 HUNK (ENSPMJG00000001540) DNAJB13 (ENSPMJG00000001531) PAAF1 (ENSPMJG00000001520) ENSPMJG00000001509 MRPL48 (ENSPMJG00000001487) RAB6A (ENSPMJG00000001471) PLEKHB1 (ENSPMJG00000001431) FAM168A (ENSPMJG00000001413) RELT (ENSPMJG00000001399) ARHGEF17 (ENSPMJG00000001318) P2RY6 (ENSPMJG00000001311) P2RY2 (ENSPMJG00000001310) FCHSD2 (ENSPMJG00000001229) ENSPMJG00000001079 ##22 SERPINH1 (ENSPMJG00000001075) #26 ENSPMJG00000001072 GDPD5 (ENSPMJG00000001037) #25 ADAMTS1 (ENSPMJG00000000967) ADAMTS5 (ENSPMJG00000000576) N6AMT1 (ENSPMJG00000000477) CGGBP1 (ENSPMJG00000000471) ZNF654 (ENSPMJG00000000451) C3orf38 (ENSPMJG00000000440) ENSPMJG00000000434 EPHA3 (ENSPMJG00000000393) PROS1 (ENSPMJG00000000352) STX19 (ENSPMJG00000000342) ARL13B (ENSPMJG00000000308) NSUN3 (ENSPMJG00000000294) Passeriformes_d ANCESTRAL SPECIES 27 ENSGT00940000155551 ENSGT00530000063946.a ENSGT00940000161070 ENSGT00940000158090 ENSGT00390000005948 ENSGT00960000187460 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00960000189555 ENSGT00940000159690 #25 ENSGT00940000156815 ENSGT00940000159090 ENSGT00390000013073 ENSGT00390000017898 ENSGT00950000183034.A ENSGT00390000000367 ENSGT00940000157088 ENSGT00940000154035.b ENSGT00940000156365 ENSGT01050000244948.c.a ENSGT00940000153665.b.a.a ENSGT00940000154490.b Flycatcher MODERN SPECIES ENSFALG00000008092 ENSFALG00000008076 ENSFALG00000008061 DNAJB13 (ENSFALG00000008045) PAAF1 (ENSFALG00000008025) ENSFALG00000014549 MRPL48 (ENSFALG00000008015) RAB6A (ENSFALG00000024542) PLEKHB1 (ENSFALG00000028129) FAM168A (ENSFALG00000008000) RELT (ENSFALG00000023817) ARHGEF17 (ENSFALG00000007976) P2RY6 (ENSFALG00000007970) P2RY2 (ENSFALG00000014521) FCHSD2 (ENSFALG00000007968) ENSFALG00000007956 ##22 Passeriformes_g ANCESTRAL SPECIES 28 ENSGT00940000155551 ENSGT00530000063946.a ENSGT00940000161070 ENSGT00940000158090 ENSGT00390000005948 ENSGT00960000187460 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00960000189555 ENSGT00940000159690 #25 ENSGT00940000156815 ENSGT00940000159090 ENSGT00390000013073 ENSGT00390000017898 ENSGT00950000183034.A ENSGT00390000000367 ENSGT00940000157088 ENSGT00940000154035.b ENSGT00940000156365 ENSGT01050000244948.c.a ENSGT00940000153665.b.a.a ENSGT00940000154490.b Medium ground finch MODERN SPECIES 232 TIAM1 (ENSGFOG00000003044) SOD1 (ENSGFOG00000003020) SCAF4 (ENSGFOG00000002940) HUNK (ENSGFOG00000002858) DNAJB13 (ENSGFOG00000002842) ENSGFOG00000002827 PAAF1 (ENSGFOG00000002813) MRPL48 (ENSGFOG00000002796) RAB6A (ENSGFOG00000002762) PLEKHB1 (ENSGFOG00000002731) FAM168A (ENSGFOG00000002717) ARHGEF17 (ENSGFOG00000002604) P2RY6 (ENSGFOG00000002581) P2RY2 (ENSGFOG00000002528) FCHSD2 (ENSGFOG00000002407) ENSGFOG00000002047 ##22 SERPINH1 (ENSGFOG00000002005) #26 ENSGFOG00000013823 GDPD5 (ENSGFOG00000013819) #25 Passeroidea ANCESTRAL SPECIES 30 ENSGT00940000155551 ENSGT01010000222551 ENSGT00940000161070 ENSGT00940000158090 ENSGT00390000005948 ENSGT00960000187460 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00960000189555 ENSGT00940000159690 #25 ENSGT00940000156815 ENSGT00940000159090 ENSGT00390000013073 ENSGT00390000017898 ENSGT00950000183034.A ENSGT00390000000367 ENSGT00940000157088 ENSGT00940000154035.b ENSGT00940000156365 ENSGT01050000244948.c.a ENSGT00940000153665.b.a.a ENSGT00940000154490.b Common canary MODERN SPECIES 19 SOD1 (ENSSCAG00000013812) ENSSCAG00000013816 HUNK (ENSSCAG00000013828) DNAJB13 (ENSSCAG00000013841) PAAF1 (ENSSCAG00000013849) ENSSCAG00000013854 MRPL48 (ENSSCAG00000013857) RAB6A (ENSSCAG00000013861) PLEKHB1 (ENSSCAG00000013864) FAM168A (ENSSCAG00000013866) RELT (ENSSCAG00000013871) ARHGEF17 (ENSSCAG00000013879) P2RY6 (ENSSCAG00000000126) P2RY2 (ENSSCAG00000000139) FCHSD2 (ENSSCAG00000000151) ENSSCAG00000000191 ##22 SERPINH1 (ENSSCAG00000000241) #26 GDPD5 (ENSSCAG00000000277) #25 Cryptodira ANCESTRAL SPECIES ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000156536 ENSGT00390000009497 Chinese turtle MODERN SPECIES 1672 FAM168A (ENSPSIG00000004982) RELT (ENSPSIG00000014422) ARHGEF17 (ENSPSIG00000013863) P2RY6 (ENSPSIG00000000587) P2RY2 (ENSPSIG00000000565) FCHSD2 (ENSPSIG00000011757) ENSPSIG00000008818 ##22 SERPINH1 (ENSPSIG00000008216) #26 ENSPSIG00000000553 Testudinoidea ANCESTRAL SPECIES 1 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000156536 ENSGT00390000009497 Testudinidae ANCESTRAL SPECIES ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000160984 #35 ENSGT00940000153118.db.a.a.b.a.a.a.b.a.b.b ENSGT01100000263474.a.b.b.j.a.b.a.a ENSGT01100000263559.B ENSGT01060000248528.b.kh Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 1949 RAB6A (ENSCABG00000014301) PLEKHB1 (ENSCABG00000014334) FAM168A (ENSCABG00000014336) RELT (ENSCABG00000014386) ARHGEF17 (ENSCABG00000014388) P2RY6 (ENSCABG00000014392) P2RY2 (ENSCABG00000014393) FCHSD2 (ENSCABG00000014395) ENSCABG00000014447 ##22 SERPINH1 (ENSCABG00000014463) #26 GDPD5 (ENSCABG00000014466) #25 KLHL35 (ENSCABG00000014467) #24 Abingdon island giant tortoise MODERN SPECIES 1443 FLRT3 (ENSCABG00000005777) ENSCABG00000005776 SEL1L2 (ENSCABG00000005739) NDUFAF5 (ENSCABG00000005566) ENSCABG00000005554 ENSCABG00000005550 ENSCABG00000005549 TASP1 (ENSCABG00000005439) ISM1 (ENSCABG00000005434) SPTLC3 (ENSCABG00000005429) ENSCABG00000005427 ENSCABG00000005425 ##22 ENSCABG00000005423 Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES C2CD3 (ENSGEVG00005003360) UCP3 (ENSGEVG00005003456) UCP2 (ENSGEVG00005003468) DNAJB13 (ENSGEVG00005003477) PAAF1 (ENSGEVG00005003484) COA4 (ENSGEVG00005003493) MRPL48 (ENSGEVG00005003500) RAB6A (ENSGEVG00005000003) PLEKHB1 (ENSGEVG00005000004) FAM168A (ENSGEVG00005000014) RELT (ENSGEVG00005000041) ARHGEF17 (ENSGEVG00005000102) P2RY6 (ENSGEVG00005000134) P2RY2 (ENSGEVG00005000154) FCHSD2 (ENSGEVG00005000174) ENSGEVG00005000198 ##22 SERPINH1 (ENSGEVG00005000244) #26 GDPD5 (ENSGEVG00005000292) #25 KLHL35 (ENSGEVG00005000367) #24 MAP6 (ENSGEVG00005000390) #27 MOGAT2 (ENSGEVG00005000505) #28 DGAT2 (ENSGEVG00005000559) #29 UVRAG (ENSGEVG00005000579) #30 WNT11 (ENSGEVG00005000625) #31 THAP12 (ENSGEVG00005000657) #32 EMSY (ENSGEVG00005000727) #33 ENSGEVG00005000778 ENSGEVG00005000789 TSKU (ENSGEVG00005000802) #35 ENSGEVG00005000810 ENSGEVG00005000823 #36 Goode s thornscrub tortoise MODERN SPECIES 17 EHBP1 (ENSGEVG00005009124) TMEM17 (ENSGEVG00005009491) B3GNT2 (ENSGEVG00005009523) COMMD1 (ENSGEVG00005009544) ENSGEVG00005009613 ENSGEVG00005009818 FLRT3 (ENSGEVG00005009842) SEL1L2 (ENSGEVG00005009876) NDUFAF5 (ENSGEVG00005010165) ENSGEVG00005010522 ENSGEVG00005010560 TASP1 (ENSGEVG00005010643) ISM1 (ENSGEVG00005010755) SPTLC3 (ENSGEVG00005010827) ENSGEVG00005010934 ENSGEVG00005010972 ##22 BTBD3 (ENSGEVG00005010998) JAG1 (ENSGEVG00005011086) SLX4IP (ENSGEVG00005011307) MKKS (ENSGEVG00005011357) SNAP25 (ENSGEVG00005011386) ANKEF1 (ENSGEVG00005011435) ENSGEVG00005011531 PAK5 (ENSGEVG00005011580) LAMP5 (ENSGEVG00005011811) PLCB4 (ENSGEVG00005012408) PLCB1 (ENSGEVG00005012730) ENSGEVG00005013255 ENSGEVG00005013282 HAO1 (ENSGEVG00005013339) BMP2 (ENSGEVG00005013391) Emydidae DUPLICATION Emydidae ANCESTRAL SPECIES 19 ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a.i ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000156536 ENSGT00940000155350 Three-toed box turtle MODERN SPECIES 41 PPME1 (ENSTMTG00000001721) #7 P4HA3 (ENSTMTG00000001737) #8 SPCS2 (ENSTMTG00000001788) #16 XRRA1 (ENSTMTG00000001798) #15 RNF169 (ENSTMTG00000001819) #14 CHRDL2 (ENSTMTG00000001837) #13 ENSTMTG00000001866 #12 LIPT2 (ENSTMTG00000001872) #11 RELT (ENSTMTG00000001891) ENSTMTG00000001926 P2RY6 (ENSTMTG00000001936) P2RY2 (ENSTMTG00000001940) FCHSD2 (ENSTMTG00000001951) ENSTMTG00000001974 ENSTMTG00000001977 ENSTMTG00000001984 ##22 SERPINH1 (ENSTMTG00000002002) #26 GDPD5 (ENSTMTG00000002008) #25 ENSTMTG00000002028 #24 ENSTMTG00000002033 #24 MAP6 (ENSTMTG00000002044) #27 MOGAT2 (ENSTMTG00000002054) #28 DGAT2 (ENSTMTG00000002074) #29 UVRAG (ENSTMTG00000002107) #30 WNT11 (ENSTMTG00000002286) #31 THAP12 (ENSTMTG00000002293) #32 EMSY (ENSTMTG00000002301) #33 ENSTMTG00000002314 TSKU (ENSTMTG00000002316) #35 ENSTMTG00000002321 #36 CAPN5 (ENSTMTG00000002326) Emydidae DUPLICATION Emydidae ANCESTRAL SPECIES 41 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000153899.b.b ENSGT00940000155345 ENSGT00390000012029 ENSGT00940000162977 ENSGT00940000159704 ENSGT00940000157404 ENSGT00940000161298 ENSGT00390000014687 ENSGT00390000004881 ENSGT00950000183045.B ENSGT00940000159062 ENSGT00940000158513 ENSGT00960000192974 ENSGT00390000008610.a.a.j.a ##22 ENSGT00940000156461 ENSGT00940000160148 ENSGT00390000016400 ENSGT00990000204385 ENSGT00950000184667 ENSGT00390000007214 ENSGT00950000182843.a.a.a.b.a.a ENSGT00940000156852 ENSGT00940000164908.b ENSGT00940000158656 ENSGT00950000182899.A ENSGT00940000156426 ENSGT00940000155428.c ENSGT00940000160301 ENSGT00390000018717.b.a.a Three-toed box turtle MODERN SPECIES 62 TMEM17 (ENSTMTG00000011710) B3GNT2 (ENSTMTG00000011706) COMMD1 (ENSTMTG00000011699) ENSTMTG00000011617 FLRT3 (ENSTMTG00000011594) ENSTMTG00000011585 SEL1L2 (ENSTMTG00000011547) NDUFAF5 (ENSTMTG00000011360) ENSTMTG00000011336 ENSTMTG00000011328 ENSTMTG00000011318 TASP1 (ENSTMTG00000011283) ENSTMTG00000011271 SPTLC3 (ENSTMTG00000011203) ENSTMTG00000011181 ENSTMTG00000011173 ##22 BTBD3 (ENSTMTG00000011163) JAG1 (ENSTMTG00000011091) SLX4IP (ENSTMTG00000011053) ENSTMTG00000011039 MKKS (ENSTMTG00000011017) SNAP25 (ENSTMTG00000011001) ANKEF1 (ENSTMTG00000010956) ENSTMTG00000010886 PAK5 (ENSTMTG00000010841) LAMP5 (ENSTMTG00000010718) PLCB4 (ENSTMTG00000008430) PLCB1 (ENSTMTG00000008101) TMX4 (ENSTMTG00000008071) HAO1 (ENSTMTG00000008067) BMP2 (ENSTMTG00000008060) painted turtle MODERN SPECIES 12 ENSCPBG00000023271 FLRT3 (ENSCPBG00000023283) ENSCPBG00000023285 SEL1L2 (ENSCPBG00000023287) NDUFAF5 (ENSCPBG00000023288) ENSCPBG00000023300 ENSCPBG00000023301 ENSCPBG00000023302 TASP1 (ENSCPBG00000023305) ISM1 (ENSCPBG00000023309) ENSCPBG00000023311 ENSCPBG00000023313 ENSCPBG00000023316 ##22 BTBD3 (ENSCPBG00000023320) JAG1 (ENSCPBG00000023326) SLX4IP (ENSCPBG00000023328) ENSCPBG00000023331 ENSCPBG00000023334 MKKS (ENSCPBG00000023335) SNAP25 (ENSCPBG00000023336) ANKEF1 (ENSCPBG00000023341) ENSCPBG00000023343 ENSCPBG00000023344 PAK5 (ENSCPBG00000023346) LAMP5 (ENSCPBG00000023350) PLCB4 (ENSCPBG00000023352) PLCB1 (ENSCPBG00000023377) TMX4 (ENSCPBG00000023390) Emydidae ANCESTRAL SPECIES ENSGT00390000008610.a.a.j.b ##22 painted turtle MODERN SPECIES 792 ENSCPBG00000027671 ##22 SERPINH1 (ENSCPBG00000027678) #26 GDPD5 (ENSCPBG00000027682) #25 KLHL35 (ENSCPBG00000027686) #24 MAP6 (ENSCPBG00000027688) #27 MOGAT2 (ENSCPBG00000027691) #28 DGAT2 (ENSCPBG00000027699) #29 UVRAG (ENSCPBG00000027703) #30 WNT11 (ENSCPBG00000027708) #31 THAP12 (ENSCPBG00000027710) #32 EMSY (ENSCPBG00000027714) #33 ENSCPBG00000027719 TSKU (ENSCPBG00000027723) #35 ACER3 (ENSCPBG00000027726) #36 ENSCPBG00000027727 CAPN5 (ENSCPBG00000027729) Lepidosauria ANCESTRAL SPECIES 17 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT00960000190120 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093 #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00390000009497 tuatara MODERN SPECIES 230 PAAF1 (ENSSPUG00000017325) MRPL48 (ENSSPUG00000017310) RAB6A (ENSSPUG00000017301) PLEKHB1 (ENSSPUG00000017295) FAM168A (ENSSPUG00000017291) ARHGEF17 (ENSSPUG00000017260) P2RY6 (ENSSPUG00000017239) P2RY2 (ENSSPUG00000017234) ENSSPUG00000017231 ENSSPUG00000017227 ENSSPUG00000017224 ENSSPUG00000017216 ENSSPUG00000017181 ##22 SERPINH1 (ENSSPUG00000017166) #26 GDPD5 (ENSSPUG00000017151) #25 Episquamata ANCESTRAL SPECIES 2 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT00960000190120 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093.g #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00390000009497 Toxicofera ANCESTRAL SPECIES 50 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT00960000190120 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690.d #25 ENSGT00940000161093.g #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 Lizard MODERN SPECIES 912 ARHGEF17 (ENSACAG00000010271) P2RY6 (ENSACAG00000010267) FCHSD2 (ENSACAG00000002097) ENSACAG00000002169 ##22 SERPINH1 (ENSACAG00000002229) #26 ENSACAG00000002298 GDPD5 (ENSACAG00000002310) #25 KLHL35 (ENSACAG00000012365) #24 MAP6 (ENSACAG00000012394) #27 MOGAT2 (ENSACAG00000012410) #28 DGAT2 (ENSACAG00000012460) #29 UVRAG (ENSACAG00000012675) #30 WNT11 (ENSACAG00000035233) #31 Laterata ANCESTRAL SPECIES 3 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 ENSGT00940000156163 #26 ENSGT00940000159690 #25 ENSGT00940000161093.g #24 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a #32 ENSGT00390000009554 #33 ENSGT00940000163623 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 ENSGT00940000156536 Argentine black and white tegu MODERN SPECIES 24 C2CD3 (ENSSMRG00000006557) UCP3 (ENSSMRG00000006611) UCP2 (ENSSMRG00000006716) DNAJB13 (ENSSMRG00000006727) PAAF1 (ENSSMRG00000006730) COA4 (ENSSMRG00000006735) MRPL48 (ENSSMRG00000006743) RAB6A (ENSSMRG00000006746) PLEKHB1 (ENSSMRG00000006749) FAM168A (ENSSMRG00000006776) RELT (ENSSMRG00000006804) ARHGEF17 (ENSSMRG00000006829) P2RY6 (ENSSMRG00000006837) P2RY2 (ENSSMRG00000006840) FCHSD2 (ENSSMRG00000006860) ENSSMRG00000006875 ##22 SERPINH1 (ENSSMRG00000006888) #26 ENSSMRG00000006893 GDPD5 (ENSSMRG00000006910) #25 KLHL35 (ENSSMRG00000006919) #24 MAP6 (ENSSMRG00000006921) #27 MOGAT2 (ENSSMRG00000006932) #28 DGAT2 (ENSSMRG00000007010) #29 UVRAG (ENSSMRG00000007022) #30 ENSSMRG00000007053 WNT11 (ENSSMRG00000007054) #31 THAP12 (ENSSMRG00000007080) #32 EMSY (ENSSMRG00000007092) #33 ENSSMRG00000007124 ENSSMRG00000007128 ENSSMRG00000007152 Mammalia ANCESTRAL SPECIES 116 ENSGT00510000048072 ENSGT00940000161030 ENSGT00940000159524 ENSGT00940000158090 ENSGT00390000005948 ENSGT00390000008503 ENSGT00390000012955 ENSGT00940000154769 ENSGT00390000013989.b ENSGT00390000005140.b.a ENSGT00940000160350 ENSGT00940000153798.B ENSGT01030000234621.C.a.b ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A ENSGT00390000008610.a.a ##22 Theria ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Marsupialia ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Marsupialia_b ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Tasmanian devil MODERN SPECIES 2 P4HA3 (ENSSHAG00000012092) #8 PGM2L1 (ENSSHAG00000011567) #9 KCNE3 (ENSSHAG00000023197) #10 LIPT2 (ENSSHAG00000026717) #11 ENSSHAG00000010021 #12 CHRDL2 (ENSSHAG00000008806) #13 RNF169 (ENSSHAG00000032266) #14 XRRA1 (ENSSHAG00000006643) #15 SPCS2 (ENSSHAG00000005389) #16 ENSSHAG00000021653 #17 ENSSHAG00000003923 ENSSHAG00000001456 SLCO2B1 (ENSSHAG00000003701) #19 ENSSHAG00000012502 ARRB1 (ENSSHAG00000012018) #21 ENSSHAG00000011198 ##22 ENSSHAG00000010962 #24 GDPD5 (ENSSHAG00000009805) #25 SERPINH1 (ENSSHAG00000009364) #26 ENSSHAG00000024198 ENSSHAG00000021367 #27 MOGAT2 (ENSSHAG00000001147) #28 DGAT2 (ENSSHAG00000031450) #29 UVRAG (ENSSHAG00000029637) #30 WNT11 (ENSSHAG00000010411) #31 THAP12 (ENSSHAG00000027613) #32 ENSSHAG00000031959 #33 ENSSHAG00000009255 #33 LRRC32 (ENSSHAG00000007473) #34 ENSSHAG00000025079 ENSSHAG00000021264 Eutheria ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Atlantogenata ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Xenarthra ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Armadillo MODERN SPECIES 3735 ENSDNOG00000038002 ##22 ZFHX4 (ENSDNOG00000038560) PEX2 (ENSDNOG00000048939) ENSDNOG00000040331 ENSDNOG00000037480 PKIA (ENSDNOG00000010415) ZC2HC1A (ENSDNOG00000035758) IL7 (ENSDNOG00000035100) ENSDNOG00000001843 ENSDNOG00000037865 Boreoeutheria ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Pecora ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Percora_a ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Bovidae ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Bovinae ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Bos ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Bos_a ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Wild yak MODERN SPECIES 575 ENSBMUG00000019927 ##22 KCTD16 (ENSBMUG00000019933) YIPF5 (ENSBMUG00000019944) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Carnivora ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Caniformia ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Canidae ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Red fox MODERN SPECIES 48 DLX5 (ENSVVUG00000015813) ENSVVUG00000015821 TAC1 (ENSVVUG00000015838) ENSVVUG00000015848 ASNS (ENSVVUG00000015859) C1GALT1 (ENSVVUG00000015871) COL28A1 (ENSVVUG00000015891) MIOS (ENSVVUG00000015960) ENSVVUG00000015968 ENSVVUG00000015971 ENSVVUG00000015981 ICA1 (ENSVVUG00000015987) NXPH1 (ENSVVUG00000016058) ENSVVUG00000016064 ENSVVUG00000016084 ENSVVUG00000016088 ##22 PHF14 (ENSVVUG00000016098) THSD7A (ENSVVUG00000016151) ENSVVUG00000016199 TMEM106B (ENSVVUG00000016203) VWDE (ENSVVUG00000016207) ENSVVUG00000016247 ENSVVUG00000016252 SCIN (ENSVVUG00000016544) ARL4A (ENSVVUG00000022573) ETV1 (ENSVVUG00000022596) ENSVVUG00000022691 ENSVVUG00000022693 ENSVVUG00000022696 Caniformia_b ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Ursidae ANCESTRAL SPECIES 15 ENSGT00390000004396 #7 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01100000264679 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT01080000257336.a.c.a #19 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.a ##22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Ursus ANCESTRAL SPECIES 36 ENSGT00940000158967 #8 ENSGT00940000158353 #9 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT01100000264679 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048 #15 ENSGT00440000038181 #16 ENSGT00950000182944.A #17 ENSGT00940000162049.ab ENSGT00940000163113 #18 ENSGT00940000162049.`b.a ENSGT01080000257336.a.c.a #19 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.a ##22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163 #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b #32 ENSGT00440000033232.d ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 ENSGT00730000110920.a #36 Polar bear MODERN SPECIES 302 ENSUMAG00000010596 P4HA3 (ENSUMAG00000010611) #8 PGM2L1 (ENSUMAG00000010658) #9 KCNE3 (ENSUMAG00000010667) #10 ENSUMAG00000010676 CHRDL2 (ENSUMAG00000010688) #13 ENSUMAG00000010704 #15 ENSUMAG00000010705 #15 SPCS2 (ENSUMAG00000010706) #16 NEU3 (ENSUMAG00000010711) #17 ENSUMAG00000010715 OR2AT4 (ENSUMAG00000010718) #18 ENSUMAG00000010723 SLCO2B1 (ENSUMAG00000010739) #19 ARRB1 (ENSUMAG00000010806) #21 ENSUMAG00000010808 ##22 ENSUMAG00000010819 #24 GDPD5 (ENSUMAG00000010823) #25 SERPINH1 (ENSUMAG00000010838) #26 MOGAT2 (ENSUMAG00000010842) #28 DGAT2 (ENSUMAG00000010859) #29 UVRAG (ENSUMAG00000010891) #30 ENSUMAG00000010943 #32 GVQW3 (ENSUMAG00000010946) EMSY (ENSUMAG00000010950) #33 ENSUMAG00000010963 ENSUMAG00000010965 ENSUMAG00000010978 ACER3 (ENSUMAG00000010990) #36 CAPN5 (ENSUMAG00000011009) MYO7A (ENSUMAG00000011108) Giant Panda DUPLICATION Giant Panda DUPLICATION Giant Panda DUPLICATION Giant Panda MODERN SPECIES 1634 ENSAMEG00000031457 ##22 Giant Panda MODERN SPECIES 1574 ENSAMEG00000029677 ##22 Giant Panda MODERN SPECIES 1662 ENSAMEG00000029885 ##22 Giant Panda MODERN SPECIES 18 ENSAMEG00000025260 PPME1 (ENSAMEG00000017200) #7 P4HA3 (ENSAMEG00000017190) #8 PGM2L1 (ENSAMEG00000017168) #9 KCNE3 (ENSAMEG00000020287) #10 LIPT2 (ENSAMEG00000017166) #11 ENSAMEG00000017155 CHRDL2 (ENSAMEG00000017149) #13 RNF169 (ENSAMEG00000017148) #14 XRRA1 (ENSAMEG00000017132) #15 SPCS2 (ENSAMEG00000017127) #16 NEU3 (ENSAMEG00000017126) #17 OR2AT4 (ENSAMEG00000020286) #18 SLCO2B1 (ENSAMEG00000017088) #19 ARRB1 (ENSAMEG00000017062) #21 RPS3 (ENSAMEG00000017051) ##22 KLHL35 (ENSAMEG00000017048) #24 GDPD5 (ENSAMEG00000017024) #25 SERPINH1 (ENSAMEG00000017004) #26 MAP6 (ENSAMEG00000016992) #27 MOGAT2 (ENSAMEG00000016976) #28 DGAT2 (ENSAMEG00000016958) #29 UVRAG (ENSAMEG00000016944) #30 WNT11 (ENSAMEG00000016932) #31 THAP12 (ENSAMEG00000016926) #32 GVQW3 (ENSAMEG00000020284) EMSY (ENSAMEG00000016911) #33 LRRC32 (ENSAMEG00000016910) #34 ENSAMEG00000016872 TSKU (ENSAMEG00000020283) #35 ACER3 (ENSAMEG00000009111) #36 Euarchontoglires ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Primates ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048.b #15 ENSGT00440000038181.eb.a.a.b #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113 #18 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.b.a.b #22 ENSGT00510000046985.h.b.a.b ENSGT00390000006485.c #23 ENSGT00910000146972 ENSGT00390000008610.a.a ##22 ENSGT00940000161093 #24 ENSGT00910000148220 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a.d #32 ENSGT00440000033232.d ENSGT00910000147490 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 Macaca ANCESTRAL SPECIES 2 ENSGT00390000006450 #11 ENSGT00940000166824 ENSGT00390000018145.cb.a.a.b.a ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048.b #15 ENSGT00440000038181.eb.a.a.b #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113.b #18 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.a ##22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a.d #32 ENSGT00440000033232.d ENSGT00910000147490 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 Pig-tailed macaque MODERN SPECIES 423 ENSMNEG00000035237 ENSMNEG00000036818 ENSMNEG00000043787 #12 CHRDL2 (ENSMNEG00000033501) #13 RNF169 (ENSMNEG00000011250) #14 XRRA1 (ENSMNEG00000041388) #15 ENSMNEG00000040433 #16 NEU3 (ENSMNEG00000036089) #17 ENSMNEG00000031819 OR2AT4 (ENSMNEG00000004250) #18 ENSMNEG00000043807 #18 ENSMNEG00000030448 SLCO2B1 (ENSMNEG00000042734) #19 TPBGL (ENSMNEG00000021296) #20 ARRB1 (ENSMNEG00000040641) #21 ENSMNEG00000032069 ##22 KLHL35 (ENSMNEG00000038478) #24 GDPD5 (ENSMNEG00000040623) #25 SERPINH1 (ENSMNEG00000034292) #26 MAP6 (ENSMNEG00000028588) #27 MOGAT2 (ENSMNEG00000017020) #28 DGAT2 (ENSMNEG00000045455) #29 UVRAG (ENSMNEG00000036116) #30 WNT11 (ENSMNEG00000042384) #31 ENSMNEG00000014529 #32 GVQW3 (ENSMNEG00000035110) ENSMNEG00000025096 EMSY (ENSMNEG00000041511) #33 LRRC32 (ENSMNEG00000041843) #34 TSKU (ENSMNEG00000013194) #35 ACER3 (ENSMNEG00000030819) #36 Macaca_a ANCESTRAL SPECIES 3 ENSGT00940000155001.B #10 ENSGT00390000006450 #11 ENSGT00940000166824 ENSGT00940000163239 #12 ENSGT00940000161241 #13 ENSGT00940000153680.b #14 ENSGT00390000016048.b #15 ENSGT00440000038181.eb.a.a.b #16 ENSGT00950000182944.A #17 ENSGT00940000162049 ENSGT00940000163113.b #18 ENSGT00390000013347.b.b ENSGT01080000257336.a.c.a #19 ENSGT00940000163536 #20 ENSGT00950000182887.C.a.b #21 ENSGT00390000008610.a.a ##22 ENSGT00940000161093 #24 ENSGT00940000159690 #25 ENSGT00940000156163.e #26 ENSGT00530000063947.C #27 ENSGT01030000234582.e.b #28 ENSGT01030000234582.f.a.b #29 ENSGT00390000012877 #30 ENSGT00940000158413 #31 ENSGT00530000063516.a.a.c.b.y.a.d #32 ENSGT00440000033232.d ENSGT00910000147490 ENSGT00390000009554 #33 ENSGT00940000162288 #34 ENSGT00940000162702 ENSGT00940000160984 #35 Crab-eating macaque MODERN SPECIES 5 LIPT2 (ENSMFAG00000038446) #11 ENSMFAG00000049105 ENSMFAG00000003267 ENSMFAG00000001432 #12 CHRDL2 (ENSMFAG00000042027) #13 RNF169 (ENSMFAG00000031265) #14 XRRA1 (ENSMFAG00000002984) #15 ENSMFAG00000040665 #16 NEU3 (ENSMFAG00000034589) #17 ENSMFAG00000062063 ENSMFAG00000035199 OR2AT4 (ENSMFAG00000015937) #18 ENSMFAG00000049841 SLCO2B1 (ENSMFAG00000042845) #19 ARRB1 (ENSMFAG00000042650) #21 ENSMFAG00000000525 ##22 KLHL35 (ENSMFAG00000031078) #24 GDPD5 (ENSMFAG00000043053) #25 SERPINH1 (ENSMFAG00000043814) #26 MAP6 (ENSMFAG00000064715) #27 MOGAT2 (ENSMFAG00000032272) #28 DGAT2 (ENSMFAG00000042930) #29 UVRAG (ENSMFAG00000001657) #30 WNT11 (ENSMFAG00000043196) #31 THAP12 (ENSMFAG00000033682) #32 ENSMFAG00000042788 ENSMFAG00000052205 EMSY (ENSMFAG00000041695) #33 LRRC32 (ENSMFAG00000039295) #34 ENSMFAG00000049800 TSKU (ENSMFAG00000024120) #35 Hominoidea ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Gibbon MODERN SPECIES 5 P4HA3 (ENSNLEG00000017017) #8 PGM2L1 (ENSNLEG00000017008) #9 KCNE3 (ENSNLEG00000028730) #10 LIPT2 (ENSNLEG00000017004) #11 POLD3 (ENSNLEG00000016988) CHRDL2 (ENSNLEG00000016982) #13 RNF169 (ENSNLEG00000016979) #14 ENSNLEG00000035901 XRRA1 (ENSNLEG00000016958) #15 ENSNLEG00000034374 #16 NEU3 (ENSNLEG00000016947) #17 ENSNLEG00000016946 SLCO2B1 (ENSNLEG00000033859) #19 TPBGL (ENSNLEG00000018145) #20 ARRB1 (ENSNLEG00000016918) #21 ENSNLEG00000036221 ##22 ENSNLEG00000016911 #24 ENSNLEG00000016910 GDPD5 (ENSNLEG00000028251) #25 SERPINH1 (ENSNLEG00000016882) #26 MAP6 (ENSNLEG00000016878) #27 MOGAT2 (ENSNLEG00000028048) #28 DGAT2 (ENSNLEG00000016866) #29 UVRAG (ENSNLEG00000027301) #30 WNT11 (ENSNLEG00000016841) #31 ENSNLEG00000032732 ##32 ENSNLEG00000033823 ENSNLEG00000028651 EMSY (ENSNLEG00000016812) #33 LRRC32 (ENSNLEG00000016810) #34 TSKU (ENSNLEG00000033845) #35 Platyrrhini ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Cebidae ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Bolivian squirrel monkey MODERN SPECIES 50 SC5D (ENSSBOG00000020424) TECTA (ENSSBOG00000019507) TBCEL (ENSSBOG00000028041) GRIK4 (ENSSBOG00000030277) ARHGEF12 (ENSSBOG00000020565) TLCD5 (ENSSBOG00000025172) POU2F3 (ENSSBOG00000033756) OAF (ENSSBOG00000020591) TRIM29 (ENSSBOG00000021760) NECTIN1 (ENSSBOG00000027245) THY1 (ENSSBOG00000021168) USP2 (ENSSBOG00000034295) MFRP (ENSSBOG00000021656) C1QTNF5 (ENSSBOG00000028009) RNF26 (ENSSBOG00000018484) ENSSBOG00000021803 ##22 MCAM (ENSSBOG00000014956) CBL (ENSSBOG00000021821) CCDC153 (ENSSBOG00000032562) NHERF4 (ENSSBOG00000020660) NLRX1 (ENSSBOG00000031476) ABCG4 (ENSSBOG00000028262) HINFP (ENSSBOG00000023355) C2CD2L (ENSSBOG00000026161) DPAGT1 (ENSSBOG00000025987) H2AX (ENSSBOG00000013319) ENSSBOG00000032506 HMBS (ENSSBOG00000021275) VPS11 (ENSSBOG00000034904) HYOU1 (ENSSBOG00000025611) SLC37A4 (ENSSBOG00000034980) Strepsirrhini ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Lemuriformes ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Mouse lemur MODERN SPECIES 28 ENSMICG00000027119 GOPC (ENSMICG00000037737) DCBLD1 (ENSMICG00000007818) ROS1 (ENSMICG00000007792) VGLL2 (ENSMICG00000007779) RFX6 (ENSMICG00000044294) ENSMICG00000038117 GPRC6A (ENSMICG00000047395) FAM162B (ENSMICG00000032976) KPNA5 (ENSMICG00000037900) ZUP1 (ENSMICG00000013671) RSPH4A (ENSMICG00000032048) ENSMICG00000044337 ENSMICG00000032724 ENSMICG00000048082 ENSMICG00000046073 ##22 HACE1 (ENSMICG00000002280) LIN28B (ENSMICG00000047923) BVES (ENSMICG00000041560) POPDC3 (ENSMICG00000045084) PREP (ENSMICG00000000906) PRDM1 (ENSMICG00000010329) ATG5 (ENSMICG00000010334) CRYBG1 (ENSMICG00000030885) RTN4IP1 (ENSMICG00000015741) QRSL1 (ENSMICG00000015754) ENSMICG00000029426 ENSMICG00000011517 ENSMICG00000004137 BEND3 (ENSMICG00000043137) PDSS2 (ENSMICG00000032777) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Glires ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Sciuridae ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Marmotini ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Marmotini_b ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Squirrel MODERN SPECIES 98 PGM2L1 (ENSSTOG00000012379) #9 KCNE3 (ENSSTOG00000012391) #10 LIPT2 (ENSSTOG00000026720) #11 POLD3 (ENSSTOG00000000455) CHRDL2 (ENSSTOG00000000457) #13 RNF169 (ENSSTOG00000000462) #14 ENSSTOG00000034261 XRRA1 (ENSSTOG00000000466) #15 SPCS2 (ENSSTOG00000012647) #16 NEU3 (ENSSTOG00000012649) #17 ENSSTOG00000020894 OR2AT4 (ENSSTOG00000030885) #18 SLCO2B1 (ENSSTOG00000012655) #19 TPBGL (ENSSTOG00000027127) #20 ARRB1 (ENSSTOG00000004545) #21 ENSSTOG00000028813 ##22 KLHL35 (ENSSTOG00000027931) #24 GDPD5 (ENSSTOG00000004596) #25 SERPINH1 (ENSSTOG00000027738) #26 ENSSTOG00000015949 #27 ENSSTOG00000024696 MOGAT2 (ENSSTOG00000012010) #28 DGAT2 (ENSSTOG00000012018) #29 UVRAG (ENSSTOG00000016316) #30 WNT11 (ENSSTOG00000029064) #31 EMSY (ENSSTOG00000001193) #33 ENSSTOG00000027244 LRRC32 (ENSSTOG00000007128) #34 ENSSTOG00000023620 TSKU (ENSSTOG00000021957) #35 ACER3 (ENSSTOG00000002656) #36 Rodentia_B ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Myomorpha ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Lesser Egyptian jerboa MODERN SPECIES 49 Gpnmb (ENSJJAG00000016316) Nupl2 (ENSJJAG00000016370) Klhl7 (ENSJJAG00000020404) Hycc1 (ENSJJAG00000010769) Tomm7 (ENSJJAG00000015481) ENSJJAG00000012041 Rapgef5 (ENSJJAG00000011120) Cdca7l (ENSJJAG00000019084) Dnah11 (ENSJJAG00000016436) Sp4 (ENSJJAG00000005918) ENSJJAG00000007215 Abcb5 (ENSJJAG00000012546) Itgb8 (ENSJJAG00000010258) ENSJJAG00000022523 Macc1 (ENSJJAG00000011164) ENSJJAG00000018343 ##22 Tmem196 (ENSJJAG00000016048) Polr1f (ENSJJAG00000015887) ENSJJAG00000002041 ENSJJAG00000007778 ENSJJAG00000022475 Snx13 (ENSJJAG00000023704) ENSJJAG00000008319 Agr3 (ENSJJAG00000017440) Agr2 (ENSJJAG00000008799) Tspan13 (ENSJJAG00000009446) Bzw2 (ENSJJAG00000016668) Ankmy2 (ENSJJAG00000021161) ENSJJAG00000023577 Sostdc1 (ENSJJAG00000010091) Crppa (ENSJJAG00000012526) Muroidea ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Murinae ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Rat MODERN SPECIES Pgm2l1 (ENSRNOG00000017079) #9 Lipt2 (ENSRNOG00000016906) #11 Pold3 (ENSRNOG00000018411) Chrdl2 (ENSRNOG00000018394) #13 Rnf169 (ENSRNOG00000026408) #14 Xrra1 (ENSRNOG00000026503) #15 Spcs2 (ENSRNOG00000018164) #16 AABR07004876.1 (ENSRNOG00000018083) Or2at1 (ENSRNOG00000018078) Neu3 (ENSRNOG00000018106) #17 Olr36 (ENSRNOG00000068594) Olr35 (ENSRNOG00000030788) #18 Slco2b1 (ENSRNOG00000017976) #19 Tpbgl (ENSRNOG00000017922) #20 Arrb1 (ENSRNOG00000030404) #21 Rps3 (ENSRNOG00000017418) ##22 Klhl35 (ENSRNOG00000017365) #24 Gdpd5 (ENSRNOG00000036859) #25 Serpinh1 (ENSRNOG00000016831) #26 Map6 (ENSRNOG00000027204) #27 Mogat2 (ENSRNOG00000027228) #28 Dgat2 (ENSRNOG00000016573) #29 Uvrag (ENSRNOG00000016206) #30 RGD1561870 (ENSRNOG00000042782) Wnt11 (ENSRNOG00000015982) #31 Thap12 (ENSRNOG00000053923) #32 Emsy (ENSRNOG00000015560) #33 Lrrc32 (ENSRNOG00000015310) #34 Gucy2e (ENSRNOG00000015058) Tsku (ENSRNOG00000027784) #35 ENSRNOG00000065313 Mus ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Mus_A ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Mus_B ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Mus_C ANCESTRAL SPECIES ENSGT00390000008610.a.a ##22 Steppe mouse MODERN SPECIES 1244 ENSMSIG00000007879 ENSMSIG00000007892 ##22 Platypus MODERN SPECIES 12 C2CD3 (ENSOANG00000007736) UCP3 (ENSOANG00000007738) ENSOANG00000007210 DNAJB13 (ENSOANG00000044879) PAAF1 (ENSOANG00000013904) COA4 (ENSOANG00000013905) MRPL48 (ENSOANG00000013906) ENSOANG00000037519 ENSOANG00000048151 FAM168A (ENSOANG00000035982) RELT (ENSOANG00000045470) ARHGEF17 (ENSOANG00000029019) P2RY2 (ENSOANG00000014477) ENSOANG00000045391 FCHSD2 (ENSOANG00000008170) ENSOANG00000044114 ##22 GDPD5 (ENSOANG00000019968) #25 SERPINH1 (ENSOANG00000012755) #26 ENSOANG00000045504 #27 MOGAT2 (ENSOANG00000009381) #28 DGAT2 (ENSOANG00000014557) #29 UVRAG (ENSOANG00000014556) #30 WNT11 (ENSOANG00000049556) #31 THAP12 (ENSOANG00000000831) #32 EMSY (ENSOANG00000013569) #33 LRRC32 (ENSOANG00000047117) #34 ENSOANG00000001116 ENSOANG00000040240 #35 ACER3 (ENSOANG00000001122) #36 B3GNT6 (ENSOANG00000044430) #37 CAPN5 (ENSOANG00000041577) Euteleostomi ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Amniota ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Mammalia ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Theria ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Eutheria ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Pecora ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Percora_a ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Bovidae ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Bovinae ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Bos ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Bos_a ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Domestic yak MODERN SPECIES 43 ENSBGRG00000018268 ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Ovalentaria ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Cichlidae ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Nile tilapia MODERN SPECIES 5 ENSONIG00000001188 ENSONIG00000031328 ENSONIG00000001197 PARL (ENSONIG00000001201) cldn15lb (ENSONIG00000035101) chp2 (ENSONIG00000001207) dlc (ENSONIG00000001208) timm50 (ENSONIG00000001216) ENSONIG00000034990 ENSONIG00000042086 si:cabz01090165.1 (ENSONIG00000001256) ENSONIG00000031201 ENSONIG00000001259 ENSONIG00000041791 ENSONIG00000001261 ENSONIG00000001263 ##22 KCTD14 (ENSONIG00000001268) ENSONIG00000030254 INTS4 (ENSONIG00000001272) aamdc (ENSONIG00000001280) eif3k (ENSONIG00000001283) zgc:85932 (ENSONIG00000001284) ACTN4 (ENSONIG00000001316) ENSONIG00000001337 slc8a2b (ENSONIG00000001345) srsf7a (ENSONIG00000001360) hnrnpl2 (ENSONIG00000036682) ENSONIG00000001370 med17 (ENSONIG00000001372) ENSONIG00000030086 ech1 (ENSONIG00000035109) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Carangaria ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Carangaria_A ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Seriola ANCESTRAL SPECIES ENSGT00390000008610.b ##22 Yellowtail amberjack MODERN SPECIES 722 ENSSLDG00000007403 ##22 Elephant shark MODERN SPECIES 1503 vps36 (ENSCMIG00000018414) ENSCMIG00000018411 NEK3 (ENSCMIG00000018407) ENSCMIG00000018404 ENSCMIG00000018403 ENSCMIG00000018399 alg11 (ENSCMIG00000018394) ATP7B (ENSCMIG00000018356) ENSCMIG00000018341 GPR143 (ENSCMIG00000018335) ENSCMIG00000018261 anos1a (ENSCMIG00000018216) ENSCMIG00000018212 ENSCMIG00000018189 ENSCMIG00000018166 rps3 (ENSCMIG00000018142) #22 ARHGEF17 (ENSCMIG00000018121) ENSCMIG00000018106 FAM168A (ENSCMIG00000018103) plekhb1 (ENSCMIG00000018102) rab6a (ENSCMIG00000018069) mrpl48 (ENSCMIG00000018042) PAAF1 (ENSCMIG00000018036) dnajb13 (ENSCMIG00000018032) ENSCMIG00000018026 ucp2 (ENSCMIG00000018023) ENSCMIG00000018021 ENSCMIG00000018015 ENSCMIG00000018010 ppme1 (ENSCMIG00000018008) #7 P4HA3 (ENSCMIG00000018001) #8 Cyclostomata ANCESTRAL SPECIES ENSGT00390000008610 #22 Lamprey MODERN SPECIES 4925 rps3 (ENSPMAG00000007775) #22 Hagfish MODERN SPECIES 216 pou4f2 (ENSEBUG00000006469) kif3a (ENSEBUG00000016679) ENSEBUG00000003320 ENSEBUG00000011748 folr (ENSEBUG00000012723) ENSEBUG00000003298 ENSEBUG00000001480 ENSEBUG00000009282 rps3 (ENSEBUG00000003683) #22 ENSEBUG00000001372 ENSEBUG00000000567 ENSEBUG00000005673 ENSEBUG00000005859 ENSEBUG00000012601 ENSEBUG00000001909 ENSEBUG00000012127 hccsb (ENSEBUG00000000951) mrpl30 (ENSEBUG00000013592) ENSEBUG00000012859 rnpep (ENSEBUG00000010565) klhdc10 (ENSEBUG00000005871) ENSEBUG00000012712 ENSEBUG00000009108 ENSEBUG00000005176