Primates ANCESTRAL SPECIES 5 ENSGT00530000064839 ENSGT00940000162079 ENSGT00940000162484 ENSGT00940000160997 ENSGT00940000154993 ENSGT00940000162892 ENSGT00940000154723.b ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Strepsirrhini ANCESTRAL SPECIES 7 ENSGT00940000162450 ENSGT00940000162079 ENSGT00940000162484 ENSGT00940000160997 ENSGT00940000154993 ENSGT00940000161821 ENSGT00940000154723.b ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Lemuriformes ANCESTRAL SPECIES 3 ENSGT00940000162079 ENSGT00940000162484 ENSGT00940000160997 ENSGT00940000154993 ENSGT00940000161821 ENSGT00940000162892 ENSGT00940000154723.b ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b #33 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 ENSGT00940000160991 Mouse lemur MODERN SPECIES 28 CYP21A2 (ENSMICG00000016652) #7 ENSMICG00000046247 #8 ENSMICG00000016667 #9 ATF6B (ENSMICG00000047519) #10 PRRT1 (ENSMICG00000032288) #11 PPT2 (ENSMICG00000001807) #12 EGFL8 (ENSMICG00000042415) #13 AGPAT1 (ENSMICG00000001813) #14 RNF5 (ENSMICG00000048108) #15 AGER (ENSMICG00000001823) #16 PBX2 (ENSMICG00000001829) #17 GPSM3 (ENSMICG00000026321) #18 NOTCH4 (ENSMICG00000001835) #19 HLA-DMB (ENSMICG00000043729) #20 HLA-DMA (ENSMICG00000010132) #21 BRD2 (ENSMICG00000003693) #22 HLA-DOA (ENSMICG00000047683) #23 HLA-DPA1 (ENSMICG00000003711) #24 HLA-DPB1 (ENSMICG00000030867) #25 ENSMICG00000001373 #26 COL11A2 (ENSMICG00000000879) #27 RXRB (ENSMICG00000000899) #28 SLC39A7 (ENSMICG00000000905) #29 HSD17B8 (ENSMICG00000000908) #30 RING1 (ENSMICG00000030050) #31 VPS52 (ENSMICG00000027900) #32 ENSMICG00000035485 #33 WDR46 (ENSMICG00000000916) #34 PFDN6 (ENSMICG00000000922) #35 RGL2 (ENSMICG00000000926) #36 TAPBP (ENSMICG00000042293) #37 Lemuriformes_a ANCESTRAL SPECIES 76 ENSGT00940000163287 #19 ENSGT00940000162079 ENSGT00940000162484 ENSGT00940000160997 ENSGT00940000154993 ENSGT00940000162892 ENSGT00940000154723.b ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 872 HLA-DQB1 (ENSPCOG00000014494) HLA-DOB (ENSPCOG00000022286) TAP2 (ENSPCOG00000014799) PSMB8 (ENSPCOG00000028091) TAP1 (ENSPCOG00000019389) PSMB9 (ENSPCOG00000017686) HLA-DMB (ENSPCOG00000018934) #20 HLA-DMA (ENSPCOG00000022072) #21 ENSPCOG00000016191 ENSPCOG00000018456 #22 ENSPCOG00000018880 HLA-DOA (ENSPCOG00000014372) #23 HLA-DPA1 (ENSPCOG00000015236) #24 Coquerels sifaka MODERN SPECIES 611 CPZ (ENSPCOG00000018885) TRMT44 (ENSPCOG00000028809) ACOX3 (ENSPCOG00000015967) HTRA3 (ENSPCOG00000015549) NANP (ENSPCOG00000022703) ENSPCOG00000014381 NINL (ENSPCOG00000019338) GINS1 (ENSPCOG00000016034) ABHD12 (ENSPCOG00000022073) PYGB (ENSPCOG00000021348) ENTPD6 (ENSPCOG00000022862) VSX1 (ENSPCOG00000013919) ACSS1 (ENSPCOG00000018745) APMAP (ENSPCOG00000023592) CST7 (ENSPCOG00000019725) ENSPCOG00000023905 #22 SYNDIG1 (ENSPCOG00000003880) ENSPCOG00000021349 Greater bamboo lemur MODERN SPECIES 650 ENSPSMG00000007220 ENSPSMG00000007226 HLA-DRA (ENSPSMG00000007272) ENSPSMG00000007912 ENSPSMG00000008349 HLA-DQB1 (ENSPSMG00000008743) HLA-DOB (ENSPSMG00000008851) TAP2 (ENSPSMG00000008940) PSMB8 (ENSPSMG00000009083) TAP1 (ENSPSMG00000009102) PSMB9 (ENSPSMG00000009117) HLA-DMB (ENSPSMG00000009134) #20 HLA-DMA (ENSPSMG00000009171) #21 BRD2 (ENSPSMG00000009223) #22 ENSPSMG00000009252 HLA-DOA (ENSPSMG00000009261) #23 HLA-DPA1 (ENSPSMG00000009402) #24 HLA-DPB1 (ENSPSMG00000009639) #25 ENSPSMG00000009792 #24 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 220 ENSOGAG00000015917 ENSOGAG00000033148 CYP4F115 (ENSOGAG00000011748) CYP4F113 (ENSOGAG00000007410) ENSOGAG00000028565 CYP4F112 (ENSOGAG00000031204) CYP4F111 (ENSOGAG00000002017) CYP4F3 (ENSOGAG00000032860) CYP4F22 (ENSOGAG00000030936) ENSOGAG00000024112 PGLYRP2 (ENSOGAG00000026199) RASAL3 (ENSOGAG00000033656) WIZ (ENSOGAG00000010952) AKAP8L (ENSOGAG00000010943) AKAP8 (ENSOGAG00000029564) ENSOGAG00000000840 #22 EPHX3 (ENSOGAG00000006687) NOTCH3 (ENSOGAG00000006680) ENSOGAG00000024942 ILVBL (ENSOGAG00000014020) SYDE1 (ENSOGAG00000014015) OR1I1 (ENSOGAG00000003203) CASP14 (ENSOGAG00000024750) CCDC105 (ENSOGAG00000011860) SLC1A6 (ENSOGAG00000029166) ENSOGAG00000033292 OR7C2 (ENSOGAG00000031212) ENSOGAG00000025389 ENSOGAG00000028478 ENSOGAG00000026639 Bushbaby MODERN SPECIES 146 ENSOGAG00000013069 ENSOGAG00000025050 BTNL2 (ENSOGAG00000008396) HLA-DRA (ENSOGAG00000008398) ENSOGAG00000009732 ENSOGAG00000030012 ENSOGAG00000008401 HLA-DQB1 (ENSOGAG00000005662) ENSOGAG00000031343 PSMB8 (ENSOGAG00000013830) TAP1 (ENSOGAG00000013836) PSMB9 (ENSOGAG00000013846) ENSOGAG00000013823 HLA-DMB (ENSOGAG00000032749) #20 HLA-DMA (ENSOGAG00000006029) #21 BRD2 (ENSOGAG00000006473) #22 HLA-DOA (ENSOGAG00000014685) #23 HLA-DPA1 (ENSOGAG00000006476) #24 ENSOGAG00000016138 #25 ENSOGAG00000034269 COL11A2 (ENSOGAG00000025975) #27 RXRB (ENSOGAG00000011689) #28 SLC39A7 (ENSOGAG00000030006) #29 HSD17B8 (ENSOGAG00000006214) #30 RING1 (ENSOGAG00000006220) #31 VPS52 (ENSOGAG00000006222) #32 RPS18 (ENSOGAG00000006225) #33 B3GALT4 (ENSOGAG00000006228) WDR46 (ENSOGAG00000006230) #34 ENSOGAG00000028341 #35 RGL2 (ENSOGAG00000003996) #36 Haplorrhini ANCESTRAL SPECIES 2 ENSGT00940000163287 #19 ENSGT00530000064839 ENSGT00940000162484 ENSGT00940000160997 ENSGT00940000154993 ENSGT00940000162892 ENSGT00940000154723.b ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Tarsier DUPLICATION Tarsier MODERN SPECIES 1195 BRD2 (ENSTSYG00000004390) #22 HLA-DOA (ENSTSYG00000005170) #23 HLA-DPA1 (ENSTSYG00000013384) #24 HLA-DPB1 (ENSTSYG00000009782) #25 COL11A2 (ENSTSYG00000027190) #27 RXRB (ENSTSYG00000033111) #28 SLC39A7 (ENSTSYG00000026087) #29 HSD17B8 (ENSTSYG00000029416) #30 RING1 (ENSTSYG00000036469) #31 VPS52 (ENSTSYG00000012493) #32 RPS18 (ENSTSYG00000012508) #33 WDR46 (ENSTSYG00000028390) #34 ENSTSYG00000037267 #35 ENSTSYG00000006290 TAPBP (ENSTSYG00000036113) #37 DAXX (ENSTSYG00000029920) Tarsier MODERN SPECIES 1411 CRHR2 (ENSTSYG00000001674) GARS (ENSTSYG00000008538) ENSTSYG00000025595 #22 GGCT (ENSTSYG00000001156) NOD1 (ENSTSYG00000001155) Simiiformes ANCESTRAL SPECIES 5 ENSGT00530000064839 ENSGT00940000162484 ENSGT00940000160997 ENSGT00940000154993.m.a.b ENSGT00940000162892.a.a ENSGT00940000154723.b ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES 2 ENSGT00940000154723.b.k ENSGT00940000154993.n ENSGT00940000162892.a.a.c ENSGT00940000154723.b.l.a.b ENSGT00940000162892.a.a.d ENSGT00940000154723.b.l.b ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b.lc #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022.b #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Cebidae ANCESTRAL SPECIES 5 ENSGT00940000154993.n.a ENSGT00940000162892.a.a.c ENSGT00940000154723.b.l.a.b ENSGT00940000162892.a.a.d ENSGT00940000154723.b.l.b ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b.lc #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022.b #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Cebidae_a ANCESTRAL SPECIES 25 ENSGT00940000154993.n.a.b ENSGT00940000162892.a.a.c ENSGT00940000154723.b.l.a.b ENSGT00940000162892.a.a.d ENSGT00940000154723.b.l.b ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b.lc #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022.b #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b #33 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 ENSGT00940000160991 Capuchin MODERN SPECIES 24 HLA-DRA (ENSCCAG00000027271) ENSCCAG00000033580 ENSCCAG00000024284 HLA-DRB1 (ENSCCAG00000025004) HLA-DQA2 (ENSCCAG00000023549) ENSCCAG00000025088 ENSCCAG00000023824 ENSCCAG00000028168 HLA-DOB (ENSCCAG00000034021) TAP2 (ENSCCAG00000035497) PSMB8 (ENSCCAG00000026335) TAP1 (ENSCCAG00000024218) PSMB9 (ENSCCAG00000036808) HLA-DMB (ENSCCAG00000030904) #20 HLA-DMA (ENSCCAG00000031122) #21 ENSCCAG00000016930 #22 HLA-DOA (ENSCCAG00000024211) #23 HLA-DPA1 (ENSCCAG00000035048) #24 HLA-DPB1 (ENSCCAG00000036491) #25 COL11A2 (ENSCCAG00000021086) #27 RXRB (ENSCCAG00000015878) #28 SLC39A7 (ENSCCAG00000021481) #29 HSD17B8 (ENSCCAG00000034063) #30 RING1 (ENSCCAG00000020672) #31 VPS52 (ENSCCAG00000029806) #32 RPS18 (ENSCCAG00000023639) #33 WDR46 (ENSCCAG00000029352) #34 PFDN6 (ENSCCAG00000027108) #35 RGL2 (ENSCCAG00000036457) #36 TAPBP (ENSCCAG00000030579) #37 ZBTB22 (ENSCCAG00000019414) Bolivian squirrel monkey MODERN SPECIES 49 DEFB110 (ENSSBOG00000019583) DEFB112 (ENSSBOG00000031354) TFAP2D (ENSSBOG00000033191) TFAP2B (ENSSBOG00000021734) ENSSBOG00000033280 PKHD1 (ENSSBOG00000026830) IL17A (ENSSBOG00000031117) IL17F (ENSSBOG00000022387) MCM3 (ENSSBOG00000019946) PAQR8 (ENSSBOG00000008561) EFHC1 (ENSSBOG00000023512) TRAM2 (ENSSBOG00000033153) HLA-DMB (ENSSBOG00000028499) #20 HLA-DMA (ENSSBOG00000020585) #21 ENSSBOG00000034712 ENSSBOG00000033070 #22 HLA-DOA (ENSSBOG00000022957) #23 HLA-DPA1 (ENSSBOG00000026139) #24 HLA-DPB1 (ENSSBOG00000023374) #25 COL11A2 (ENSSBOG00000030814) #27 RXRB (ENSSBOG00000028234) #28 SLC39A7 (ENSSBOG00000027575) #29 HSD17B8 (ENSSBOG00000033905) #30 ENSSBOG00000021715 #31 VPS52 (ENSSBOG00000034931) #32 ENSSBOG00000034369 ##33 WDR46 (ENSSBOG00000032568) #34 PFDN6 (ENSSBOG00000034801) #35 RGL2 (ENSSBOG00000031644) #36 TAPBP (ENSSBOG00000031122) #37 ZBTB22 (ENSSBOG00000018285) Marmoset MODERN SPECIES 16 ENSCJAG00000072632 ENSCJAG00000042232 ENSCJAG00000044447 ENSCJAG00000046350 ENSCJAG00000082318 ENSCJAG00000073641 ENSCJAG00000043141 ENSCJAG00000072040 ENSCJAG00000021548 ENSCJAG00000045515 HLA-DOB (ENSCJAG00000035217) TAP2 (ENSCJAG00000021550) TAP1 (ENSCJAG00000021552) PSMB9 (ENSCJAG00000021553) HLA-DMA (ENSCJAG00000021558) #21 ENSCJAG00000021566 #22 HLA-DOA (ENSCJAG00000021571) #23 HLA-DPA1 (ENSCJAG00000057301) #24 HLA-DPB1 (ENSCJAG00000021575) #25 COL11A2 (ENSCJAG00000021577) #27 RXRB (ENSCJAG00000021619) #28 SLC39A7 (ENSCJAG00000021622) #29 ENSCJAG00000021632 #30 RING1 (ENSCJAG00000081691) #31 VPS52 (ENSCJAG00000021644) #32 ENSCJAG00000021650 #33 B3GALT4 (ENSCJAG00000043225) WDR46 (ENSCJAG00000021659) #34 PFDN6 (ENSCJAG00000021665) #35 RGL2 (ENSCJAG00000021668) #36 TAPBP (ENSCJAG00000021675) #37 Mas night monkey MODERN SPECIES 1006 ENSANAG00000025439 ENSANAG00000023444 HLA-DQA2 (ENSANAG00000023973) HLA-DQB2 (ENSANAG00000025105) TAP2 (ENSANAG00000023266) PSMB8 (ENSANAG00000023214) TAP1 (ENSANAG00000025374) PSMB9 (ENSANAG00000018195) ENSANAG00000029686 HLA-DMB (ENSANAG00000031322) #20 HLA-DMA (ENSANAG00000024515) #21 ENSANAG00000022510 BRD2 (ENSANAG00000025054) #22 HLA-DOA (ENSANAG00000023738) #23 ENSANAG00000020251 ENSANAG00000021916 HLA-DPA1 (ENSANAG00000025586) #24 Platyrrhini ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.mc #22 Cebidae ANCESTRAL SPECIES 1 ENSGT00510000049371.a ENSGT00390000007658.h ENSGT00390000015471 ENSGT00390000008338 ENSGT00390000007464 ENSGT00390000008549 ENSGT00490000043472 ENSGT00940000159474 ENSGT00940000154674.i.b ENSGT00940000156450 ENSGT00940000156945 ENSGT00530000063460.A.a ENSGT00940000160126 ENSGT00940000160247 ENSGT00940000158038 ENSGT00940000153385.b.a.b.mc #22 ENSGT00390000007027 ENSGT00390000018245.d ENSGT00940000157721 ENSGT01000000214434.F ENSGT00940000159251 ENSGT00940000155417 ENSGT00390000008678 ENSGT00950000182916.a.b.a.a.a.a ENSGT00910000147158 ENSGT00940000157668.e ENSGT00940000155136 ENSGT00940000158468 ENSGT00910000144243.e ENSGT00940000156746 ENSGT00940000155661 Cebidae_a ANCESTRAL SPECIES ENSGT00510000049371.a ENSGT00390000007658.h ENSGT00390000015471 ENSGT00390000008338.i ENSGT00390000007464 ENSGT00390000008549 ENSGT00490000043472 ENSGT00940000159474 ENSGT00940000154674.i.b ENSGT00940000156450 ENSGT00940000156945 ENSGT00530000063460.A.a ENSGT00940000160126 ENSGT00940000160247 ENSGT00940000158038 ENSGT00940000153385.b.a.b.mc #22 ENSGT00390000007027 ENSGT00390000018245.d ENSGT00940000157721 ENSGT01000000214434.F ENSGT00940000159251 ENSGT00940000155417 ENSGT00390000008678 ENSGT00950000182916.a.b.a.a.a.a ENSGT00910000147158 ENSGT00940000157668.e ENSGT00940000155136 ENSGT00940000158468 ENSGT00910000144243.e.a ENSGT00940000156746 ENSGT00940000155661 Capuchin MODERN SPECIES 163 TTC22 (ENSCCAG00000033419) LEXM (ENSCCAG00000027952) ENSCCAG00000028192 TMEM61 (ENSCCAG00000024822) BSND (ENSCCAG00000021350) ENSCCAG00000030255 PCSK9 (ENSCCAG00000036131) USP24 (ENSCCAG00000027655) ENSCCAG00000022168 PLPP3 (ENSCCAG00000001330) PRKAA2 (ENSCCAG00000035336) FYB2 (ENSCCAG00000027589) C8A (ENSCCAG00000024662) C8B (ENSCCAG00000031384) DAB1 (ENSCCAG00000024787) ENSCCAG00000022246 #22 OMA1 (ENSCCAG00000022811) TACSTD2 (ENSCCAG00000032228) MYSM1 (ENSCCAG00000029058) FGGY (ENSCCAG00000033989) ENSCCAG00000025106 HOOK1 (ENSCCAG00000006471) CYP2J2 (ENSCCAG00000027549) C1orf87 (ENSCCAG00000027605) Bolivian squirrel monkey MODERN SPECIES 45 TTC4 (ENSSBOG00000032224) TTC22 (ENSSBOG00000026280) LEXM (ENSSBOG00000006931) DHCR24 (ENSSBOG00000025550) TMEM61 (ENSSBOG00000013875) BSND (ENSSBOG00000035713) PCSK9 (ENSSBOG00000029957) USP24 (ENSSBOG00000022906) ENSSBOG00000031773 PLPP3 (ENSSBOG00000021254) PRKAA2 (ENSSBOG00000036202) FYB2 (ENSSBOG00000024468) C8A (ENSSBOG00000023783) C8B (ENSSBOG00000034357) DAB1 (ENSSBOG00000030885) ENSSBOG00000024749 #22 OMA1 (ENSSBOG00000023199) TACSTD2 (ENSSBOG00000024148) MYSM1 (ENSSBOG00000031552) ENSSBOG00000029734 FGGY (ENSSBOG00000031213) HOOK1 (ENSSBOG00000032069) CYP2J2 (ENSSBOG00000033096) C1orf87 (ENSSBOG00000033425) ENSSBOG00000024205 NFIA (ENSSBOG00000030190) ENSSBOG00000028260 ENSSBOG00000028010 PATJ (ENSSBOG00000022857) KANK4 (ENSSBOG00000020644) USP1 (ENSSBOG00000020735) Marmoset MODERN SPECIES 19 TTC4 (ENSCJAG00000015611) TTC22 (ENSCJAG00000015639) LEXM (ENSCJAG00000015646) DHCR24 (ENSCJAG00000015653) TMEM61 (ENSCJAG00000015669) BSND (ENSCJAG00000042101) PCSK9 (ENSCJAG00000015682) USP24 (ENSCJAG00000015739) PLPP3 (ENSCJAG00000015880) ENSCJAG00000054878 PRKAA2 (ENSCJAG00000015889) FYB2 (ENSCJAG00000015907) C8A (ENSCJAG00000015926) C8B (ENSCJAG00000015932) DAB1 (ENSCJAG00000015941) ENSCJAG00000022997 #22 ENSCJAG00000070548 ENSCJAG00000084546 OMA1 (ENSCJAG00000016000) ENSCJAG00000074487 TACSTD2 (ENSCJAG00000016017) MYSM1 (ENSCJAG00000016020) FGGY (ENSCJAG00000016043) ENSCJAG00000022957 HOOK1 (ENSCJAG00000016077) CYP2J2 (ENSCJAG00000016130) C1orf87 (ENSCJAG00000016137) ENSCJAG00000053189 ENSCJAG00000022998 NFIA (ENSCJAG00000016165) ENSCJAG00000078946 Catarrhini ANCESTRAL SPECIES 5 ENSGT00940000154993.m.b ENSGT00940000154993.m.a.b ENSGT00940000162892.a.a ENSGT00940000154723.b.m.a ENSGT00940000162892.a.b ENSGT00940000154723.b.n ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.n #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Hominoidea ANCESTRAL SPECIES 4 ENSGT00940000154993.m.b ENSGT00940000154993.m.a.b ENSGT00940000162892.a.a ENSGT00940000154723.b.m.a ENSGT00940000162892.a.b ENSGT00940000154723.b.n ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.b.a.a.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.m.a #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Hominidae ANCESTRAL SPECIES 5 ENSGT00940000160997 ENSGT00940000154993.m.a.a ENSGT00940000162892.a.a ENSGT00940000154723.b.m.a ENSGT00940000162892.a.b ENSGT00940000154723.b.n ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.b.a.a.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.m.a #33 ENSGT00390000012691.c.b.n #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00940000154993.m.a.b ENSGT00940000154993.m.a.a ENSGT00940000162892.a.a ENSGT00940000154723.b.m.a ENSGT00940000162892.a.b ENSGT00940000154723.b.n ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.b.a.a.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.m.a #33 ENSGT00390000012691.c.b.n #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 Gorilla MODERN SPECIES 19 BTNL2 (ENSGGOG00000009855) HLA-DRA (ENSGGOG00000009861) HLA-DRB5 (ENSGGOG00000037929) ENSGGOG00000000700 HLA-DQA1 (ENSGGOG00000013538) HLA-DQB1 (ENSGGOG00000004252) ENSGGOG00000037744 HLA-DQB2 (ENSGGOG00000014413) HLA-DOB (ENSGGOG00000043194) TAP2 (ENSGGOG00000010941) PSMB8 (ENSGGOG00000010953) TAP1 (ENSGGOG00000010958) PSMB9 (ENSGGOG00000010965) HLA-DMB (ENSGGOG00000022404) #20 ENSGGOG00000005835 #21 BRD2 (ENSGGOG00000043461) #22 ENSGGOG00000005838 HLA-DOA (ENSGGOG00000010653) #23 HLA-DPA1 (ENSGGOG00000013625) #24 HLA-DPB1 (ENSGGOG00000013630) #25 COL11A2 (ENSGGOG00000009799) #27 RXRB (ENSGGOG00000009823) #28 SLC39A7 (ENSGGOG00000009830) #29 HSD17B8 (ENSGGOG00000009838) #30 RING1 (ENSGGOG00000009842) #31 VPS52 (ENSGGOG00000006565) #32 RPS18 (ENSGGOG00000006571) #33 WDR46 (ENSGGOG00000006578) #34 PFDN6 (ENSGGOG00000006583) #35 RGL2 (ENSGGOG00000006585) #36 TAPBP (ENSGGOG00000006593) #37 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00940000154993.m.a.b ENSGT00940000154993.m.a.a ENSGT00940000162892.a.a ENSGT00940000154723.b.m.a ENSGT00940000162892.a.b ENSGT00940000154723.b.n ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.b.a.a.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.m.a #33 ENSGT00390000012691.c.b.n #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 Pan ANCESTRAL SPECIES 5 ENSGT00940000154993.m.b ENSGT00940000154993.m.a.b ENSGT00940000162892.a.a ENSGT00940000154723.b.m.a ENSGT00940000162892.a.b ENSGT00940000154723.b.n ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.b.a.a.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.m.a #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Chimpanzee MODERN SPECIES 19 PATR-DRA (ENSPTRG00000018016) PATR-DRB5 (ENSPTRG00000023735) ENSPTRG00000051243 PATR-DQB1 (ENSPTRG00000018001) HLA-DQA1 (ENSPTRG00000018017) HLA-DQB1 (ENSPTRG00000018018) HLA-DQA2 (ENSPTRG00000034186) HLA-DQB2 (ENSPTRG00000023404) PATR-DOB (ENSPTRG00000018020) TAP2 (ENSPTRG00000018021) PSMB8 (ENSPTRG00000018022) TAP1 (ENSPTRG00000018023) PSMB9 (ENSPTRG00000018024) PATR-DMB (ENSPTRG00000018025) #20 ENSPTRG00000018026 #21 BRD2 (ENSPTRG00000042676) #22 ENSPTRG00000018027 HLA-DOA (ENSPTRG00000018028) #23 HLA-DPA1 (ENSPTRG00000018029) #24 HLA-DPB1 (ENSPTRG00000018030) #25 COL11A2 (ENSPTRG00000018033) #27 RXRB (ENSPTRG00000018034) #28 SLC39A7 (ENSPTRG00000018035) #29 HSD17B8 (ENSPTRG00000018036) #30 RING1 (ENSPTRG00000018037) #31 VPS52 (ENSPTRG00000018038) #32 RPS18 (ENSPTRG00000018039) #33 WDR46 (ENSPTRG00000018040) #34 PFDN6 (ENSPTRG00000018041) #35 RGL2 (ENSPTRG00000018042) #36 TAPBP (ENSPTRG00000018043) #37 Bonobo MODERN SPECIES 19 ENSPPAG00000036652 ENSPPAG00000039594 ENSPPAG00000019881 HLA-DQB1 (ENSPPAG00000041275) HLA-DQA2 (ENSPPAG00000038014) HLA-DQB2 (ENSPPAG00000041341) HLA-DOB (ENSPPAG00000027428) TAP2 (ENSPPAG00000033938) PSMB8 (ENSPPAG00000042377) TAP1 (ENSPPAG00000029436) PSMB9 (ENSPPAG00000038623) ENSPPAG00000033020 HLA-DMB (ENSPPAG00000037856) #20 HLA-DMA (ENSPPAG00000041639) #21 ENSPPAG00000027710 BRD2 (ENSPPAG00000016843) #22 HLA-DOA (ENSPPAG00000036361) #23 HLA-DPA1 (ENSPPAG00000031863) #24 HLA-DPB1 (ENSPPAG00000041449) #25 COL11A2 (ENSPPAG00000013099) #27 RXRB (ENSPPAG00000038590) #28 SLC39A7 (ENSPPAG00000028225) #29 HSD17B8 (ENSPPAG00000032286) #30 RING1 (ENSPPAG00000001290) #31 VPS52 (ENSPPAG00000039628) #32 RPS18 (ENSPPAG00000037432) #33 B3GALT4 (ENSPPAG00000040442) WDR46 (ENSPPAG00000029606) #34 PFDN6 (ENSPPAG00000026096) #35 RGL2 (ENSPPAG00000030717) #36 TAPBP (ENSPPAG00000024524) #37 Human MODERN SPECIES 18 HLA-DRB5 (ENSG00000198502) HLA-DRB1 (ENSG00000196126) HLA-DQA1 (ENSG00000196735) HLA-DQB1 (ENSG00000179344) HLA-DQA2 (ENSG00000237541) HLA-DQB2 (ENSG00000232629) HLA-DOB (ENSG00000241106) ENSG00000250264 TAP2 (ENSG00000204267) PSMB8 (ENSG00000204264) PSMB9 (ENSG00000240065) TAP1 (ENSG00000168394) HLA-DMB (ENSG00000242574) #20 ENSG00000248993 HLA-DMA (ENSG00000204257) #21 BRD2 (ENSG00000204256) #22 HLA-DOA (ENSG00000204252) #23 HLA-DPA1 (ENSG00000231389) #24 HLA-DPB1 (ENSG00000223865) #25 COL11A2 (ENSG00000204248) #27 RXRB (ENSG00000204231) #28 SLC39A7 (ENSG00000112473) #29 HSD17B8 (ENSG00000204228) #30 RING1 (ENSG00000204227) #31 VPS52 (ENSG00000223501) #32 RPS18 (ENSG00000231500) #33 B3GALT4 (ENSG00000235863) WDR46 (ENSG00000227057) #34 PFDN6 (ENSG00000204220) #35 RGL2 (ENSG00000237441) #36 TAPBP (ENSG00000231925) #37 Orangutan MODERN SPECIES 19 TSBP1 (ENSPPYG00000016489) BTNL2 (ENSPPYG00000017215) HLA-DRA (ENSPPYG00000017234) HLA-DRB1 (ENSPPYG00000016490) ENSPPYG00000017216 HLA-DQA2 (ENSPPYG00000017219) HLA-DQB2 (ENSPPYG00000017220) HLA-DOB (ENSPPYG00000017221) TAP2 (ENSPPYG00000017222) PSMB8 (ENSPPYG00000017223) TAP1 (ENSPPYG00000017224) PSMB9 (ENSPPYG00000017225) HLA-DMB (ENSPPYG00000017226) #20 ENSPPYG00000017227 #21 ENSPPYG00000031820 BRD2 (ENSPPYG00000017228) #22 HLA-DOA (ENSPPYG00000016495) #23 ENSPPYG00000029571 #25 HLA-DPA1 (ENSPPYG00000017229) #24 COL11A2 (ENSPPYG00000017238) #27 RXRB (ENSPPYG00000017239) #28 SLC39A7 (ENSPPYG00000017240) #29 HSD17B8 (ENSPPYG00000017241) #30 RING1 (ENSPPYG00000017242) #31 VPS52 (ENSPPYG00000017243) #32 ENSPPYG00000025953 ##33 B3GALT4 (ENSPPYG00000017244) WDR46 (ENSPPYG00000017245) #34 PFDN6 (ENSPPYG00000038269) #35 RGL2 (ENSPPYG00000017247) #36 TAPBP (ENSPPYG00000017248) #37 Gibbon MODERN SPECIES 10 HLA-DRA (ENSNLEG00000006686) ENSNLEG00000032832 HLA-DQA1 (ENSNLEG00000032515) HLA-DQB1 (ENSNLEG00000006693) HLA-DQA2 (ENSNLEG00000027015) HLA-DQB2 (ENSNLEG00000006713) HLA-DOB (ENSNLEG00000027543) TAP2 (ENSNLEG00000006714) PSMB8 (ENSNLEG00000006733) TAP1 (ENSNLEG00000006738) PSMB9 (ENSNLEG00000006757) ENSNLEG00000032895 HLA-DMB (ENSNLEG00000006770) #20 HLA-DMA (ENSNLEG00000006775) #21 ENSNLEG00000032110 BRD2 (ENSNLEG00000006782) #22 ENSNLEG00000031675 #23 HLA-DPA1 (ENSNLEG00000034417) #24 HLA-DPB1 (ENSNLEG00000006801) #25 ENSNLEG00000030023 #27 RXRB (ENSNLEG00000006809) #28 SLC39A7 (ENSNLEG00000006815) #29 HSD17B8 (ENSNLEG00000006824) #30 RING1 (ENSNLEG00000006830) #31 VPS52 (ENSNLEG00000006832) #32 RPS18 (ENSNLEG00000006840) #33 B3GALT4 (ENSNLEG00000006841) ENSNLEG00000006842 #34 PFDN6 (ENSNLEG00000034338) #35 RGL2 (ENSNLEG00000006847) #36 ENSNLEG00000006852 #37 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000154993.m.b ENSGT00940000154993.m.a.b ENSGT00940000162892.a.a.a ENSGT00940000154723.b.m.b ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.n #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 177 ENSGT00940000154993.m.a.a ENSGT00940000154993.m.b ENSGT00940000154993.m.a.b ENSGT00940000162892.a.a.a ENSGT00940000154723.b.m.b ENSGT00940000154723.b.n ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.a.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b.nc #22 ENSGT00940000162112 #23 Golden snub-nosed monkey MODERN SPECIES 1416 TAP2 (ENSRROG00000033497) PSMB8 (ENSRROG00000019326) TAP1 (ENSRROG00000021353) PSMB9 (ENSRROG00000005028) ENSRROG00000012955 HLA-DMB (ENSRROG00000039771) #20 HLA-DMA (ENSRROG00000037828) #21 ENSRROG00000034857 ENSRROG00000012557 #22 HLA-DOA (ENSRROG00000000054) #23 Black snub-nosed monkey MODERN SPECIES 1396 HLA-DQA1 (ENSRBIG00000031838) ENSRBIG00000031872 HLA-DOB (ENSRBIG00000039119) TAP2 (ENSRBIG00000042752) PSMB8 (ENSRBIG00000032621) TAP1 (ENSRBIG00000038729) PSMB9 (ENSRBIG00000042419) ENSRBIG00000031206 HLA-DMB (ENSRBIG00000031730) #20 HLA-DMA (ENSRBIG00000027897) #21 ENSRBIG00000033102 ENSRBIG00000044329 #22 HLA-DOA (ENSRBIG00000041291) #23 Rhinopithecus ANCESTRAL SPECIES 229 ENSGT01010000222336.a.a.a.ob.a.a.o ENSGT00940000153052.c.b.a.a.a.a.a.a.b.b.b ENSGT00390000000083.a ENSGT00390000013207 ENSGT00940000153385.b.a.b.oc #22 ENSGT00940000156005 ENSGT00940000156891 ENSGT00940000158751 ENSGT00730000111019 ENSGT00390000016097 ENSGT00390000009546.a ENSGT00910000147388 ENSGT00860000135749 ENSGT00940000159153 ENSGT00940000157159 ENSGT00940000155944 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000157417 ENSGT00940000158243 ENSGT00940000161472 Black snub-nosed monkey MODERN SPECIES 713 ENSRBIG00000023969 ENSRBIG00000031681 RIOX1 (ENSRBIG00000017859) HEATR4 (ENSRBIG00000041847) ENSRBIG00000015372 #22 NUMB (ENSRBIG00000043156) PAPLN (ENSRBIG00000033248) PSEN1 (ENSRBIG00000019293) RBM25 (ENSRBIG00000039904) ZFYVE1 (ENSRBIG00000036107) DCAF4 (ENSRBIG00000041818) ENSRBIG00000040543 ENSRBIG00000038609 DPF3 (ENSRBIG00000021314) RGS6 (ENSRBIG00000038422) SIPA1L1 (ENSRBIG00000013622) ENSRBIG00000033864 PCNX1 (ENSRBIG00000027567) MAP3K9 (ENSRBIG00000031048) TTC9 (ENSRBIG00000041695) Golden snub-nosed monkey MODERN SPECIES 797 ENSRROG00000036776 ENSRROG00000039724 RIOX1 (ENSRROG00000010218) HEATR4 (ENSRROG00000040469) ENSRROG00000035725 #22 NUMB (ENSRROG00000039499) PAPLN (ENSRROG00000032324) PSEN1 (ENSRROG00000023023) RBM25 (ENSRROG00000035556) ENSRROG00000028901 ZFYVE1 (ENSRROG00000037742) DCAF4 (ENSRROG00000035960) ENSRROG00000044529 ENSRROG00000045287 DPF3 (ENSRROG00000039384) RGS6 (ENSRROG00000040751) Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.pc #22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.pc #22 Macaca ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.pc #22 Macaca_a ANCESTRAL SPECIES 1 ENSGT00940000157246 ENSGT01030000234542.b.b.a.a.a.b.u ENSGT01060000248581.A.b.l ENSGT00940000164421.c ENSGT01100000263561.C.d.a.a ENSGT01100000263561.C.d.a.b.a ENSGT00940000164421.d ENSGT01060000248581.A.b.k ENSGT00940000154646.C.n.a ENSGT00940000161507 ENSGT00940000158718 ENSGT00940000161423 ENSGT00940000159979 ENSGT00530000063777.a.a.a ENSGT00530000063777.a.a.b ENSGT00940000153385.b.a.b.pc #22 ENSGT00940000162790.a ENSGT00940000162086 ENSGT00940000160234 ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT00940000162852.a ENSGT00940000162117 ENSGT00390000003207.a ENSGT00940000159972 ENSGT00940000162084 ENSGT00940000153523.j ENSGT00950000183216.d ENSGT00940000153523.i.b ENSGT00940000162597 ENSGT00940000163161 Crab-eating macaque MODERN SPECIES 10 RAB8A (ENSMFAG00000035674) ENSMFAG00000042469 ENSMFAG00000018623 CYP4F11 (ENSMFAG00000039188) OR10H5 (ENSMFAG00000054868) ENSMFAG00000054713 CYP4F57 (ENSMFAG00000045394) ENSMFAG00000052137 ENSMFAG00000053879 CYP4F22 (ENSMFAG00000043198) PGLYRP2 (ENSMFAG00000024296) WIZ (ENSMFAG00000039361) ENSMFAG00000051652 AKAP8L (ENSMFAG00000045237) AKAP8 (ENSMFAG00000042432) ENSMFAG00000030806 #22 EPHX3 (ENSMFAG00000001020) ILVBL (ENSMFAG00000030909) SYDE1 (ENSMFAG00000037133) OR1I1 (ENSMFAG00000049100) CASP14 (ENSMFAG00000045231) CCDC105 (ENSMFAG00000039156) SLC1A6 (ENSMFAG00000003076) OR7C2 (ENSMFAG00000034243) ENSMFAG00000057232 ENSMFAG00000047405 ENSMFAG00000058125 ZNF333 (ENSMFAG00000035483) ADGRE2 (ENSMFAG00000038126) CLEC17A (ENSMFAG00000043558) NDUFB7 (ENSMFAG00000043529) Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a #22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a #22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a #22 Cercopithecinae_d DUPLICATION Cercopithecinae_d ANCESTRAL SPECIES 68 ENSGT00390000004799 ENSGT00390000018900 ENSGT00940000153165.a.b.a ENSGT00940000164696 ENSGT00940000164691.a.b ENSGT00940000164793 ENSGT00940000154251.A.b.a.b.a ENSGT00950000183206.b.c.a.b.a.a ENSGT00940000161967 ENSGT00940000162415 ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000158134.A ENSGT00940000162666 ENSGT00940000162246 ENSGT01090000259995.b.b.b ENSGT00940000153385.b.a.b.qc.a.a #22 ENSGT01090000259995.b.b.a.b.o ENSGT01090000259995.b.b.a.a.b.o.a.b ENSGT01090000259995.b.b.a.a.b.p.a Drill MODERN SPECIES 279 TRIM58 (ENSMLEG00000030196) OR2AJ1 (ENSMLEG00000005755) ENSMLEG00000031562 #22 ENSMLEG00000011380 ENSMLEG00000037918 ENSMLEG00000027254 Sooty mangabey MODERN SPECIES 301 ENSCATG00000030246 ZNF124 (ENSCATG00000035310) ENSCATG00000038074 ENSCATG00000005868 ZNF496 (ENSCATG00000031929) NLRP3 (ENSCATG00000029371) OR2B11 (ENSCATG00000043410) GCSAML (ENSCATG00000030752) OR13G1 (ENSCATG00000043354) TRIM58 (ENSCATG00000038759) ENSCATG00000030481 ENSCATG00000039502 #22 ENSCATG00000034652 ENSCATG00000017262 ENSCATG00000015507 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a.b #22 Sooty mangabey MODERN SPECIES 333 SMTNL1 (ENSCATG00000009203) TIMM10 (ENSCATG00000030369) SLC43A1 (ENSCATG00000036597) RTN4RL2 (ENSCATG00000029746) SLC43A3 (ENSCATG00000031268) PRG2 (ENSCATG00000039658) PRG3 (ENSCATG00000011827) P2RX3 (ENSCATG00000028693) SSRP1 (ENSCATG00000041377) TNKS1BP1 (ENSCATG00000037546) APLNR (ENSCATG00000019437) LRRC55 (ENSCATG00000010960) ENSCATG00000013388 OR9G4 (ENSCATG00000019474) ENSCATG00000019867 ENSCATG00000031014 #22 OR5M9 (ENSCATG00000020470) OR8J1 (ENSCATG00000014575) OR8K1 (ENSCATG00000018484) ENSCATG00000029525 ENSCATG00000018722 OR5I1 (ENSCATG00000016816) OR4S2 (ENSCATG00000018258) ENSCATG00000039191 OR4A8 (ENSCATG00000000891) Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000154993.m.a.b ENSGT00940000162892.a.a.a ENSGT00940000154723.b.m.b ENSGT00940000154993.m.a.a.a ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.n #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Vervet Monkey MODERN SPECIES 8 AGER (ENSCSAG00000009312) #16 PBX2 (ENSCSAG00000009322) #17 GPSM3 (ENSCSAG00000009326) #18 NOTCH4 (ENSCSAG00000009351) #19 HLA-DRA (ENSCSAG00000009368) ENSCSAG00000009375 HLA-DRB1 (ENSCSAG00000009383) HLA-DQA1 (ENSCSAG00000009389) HLA-DQB1 (ENSCSAG00000009394) HLA-DOB (ENSCSAG00000009402) PSMB8 (ENSCSAG00000009409) TAP1 (ENSCSAG00000009417) PSMB9 (ENSCSAG00000009427) HLA-DMB (ENSCSAG00000009430) #20 HLA-DMA (ENSCSAG00000009436) #21 BRD2 (ENSCSAG00000009445) #22 HLA-DOA (ENSCSAG00000009452) #23 ENSCSAG00000009455 #24 ENSCSAG00000009461 #25 COL11A2 (ENSCSAG00000009488) #27 RXRB (ENSCSAG00000009510) #28 SLC39A7 (ENSCSAG00000009519) #29 HSD17B8 (ENSCSAG00000009530) #30 RING1 (ENSCSAG00000009538) #31 VPS52 (ENSCSAG00000009546) #32 B3GALT4 (ENSCSAG00000019308) WDR46 (ENSCSAG00000009552) #34 PFDN6 (ENSCSAG00000009556) #35 RGL2 (ENSCSAG00000009562) #36 TAPBP (ENSCSAG00000009568) #37 ZBTB22 (ENSCSAG00000019307) Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000154993.m.a.b ENSGT00940000162892.a.a.a ENSGT00940000154723.b.m.b ENSGT00940000154993.m.a.a.a ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.n #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00910000147736 Macaca ANCESTRAL SPECIES 9 ENSGT00530000064839 ENSGT00940000160997 ENSGT00940000154993.m.a.a.b.b ENSGT00940000154993.m.b.a.b ENSGT00940000154993.m.a.a.a ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.k #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.m.b #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00910000147736 Pig-tailed macaque MODERN SPECIES 528 ENSMNEG00000020869 ENSMNEG00000018617 ENSMNEG00000044119 HLA-DQA1 (ENSMNEG00000038603) HLA-DQB1 (ENSMNEG00000027969) HLA-DOB (ENSMNEG00000043598) TAP2 (ENSMNEG00000041413) PSMB8 (ENSMNEG00000044942) TAP1 (ENSMNEG00000041518) PSMB9 (ENSMNEG00000038721) ENSMNEG00000036723 ENSMNEG00000035658 HLA-DMB (ENSMNEG00000044507) #20 HLA-DMA (ENSMNEG00000032904) #21 ENSMNEG00000039758 BRD2 (ENSMNEG00000030743) #22 HLA-DOA (ENSMNEG00000008508) #23 HLA-DPA1 (ENSMNEG00000040889) #24 HLA-DPB1 (ENSMNEG00000029725) #25 ENSMNEG00000010287 #25 COL11A2 (ENSMNEG00000022236) #27 RXRB (ENSMNEG00000034252) #28 SLC39A7 (ENSMNEG00000034647) #29 HSD17B8 (ENSMNEG00000036244) #30 RING1 (ENSMNEG00000042339) #31 VPS52 (ENSMNEG00000038741) #32 ENSMNEG00000045500 #33 WDR46 (ENSMNEG00000034609) #34 PFDN6 (ENSMNEG00000030272) #35 RGL2 (ENSMNEG00000039053) #36 ENSMNEG00000013214 Macaca_a ANCESTRAL SPECIES 9 ENSGT00890000139566 #16 ENSGT00940000160293 #17 ENSGT00390000002471 #18 ENSGT00940000163287 #19 ENSGT00950000183123.h.b ENSGT00530000064839 ENSGT00940000160997 ENSGT00940000154993.m.a.b ENSGT00940000162353 ENSGT00940000160499 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.k #24 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160668 #30 ENSGT00940000160076 #29 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.m.b #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 ENSGT00940000160991 Crab-eating macaque MODERN SPECIES 14 ENSMFAG00000033054 #19 ENSMFAG00000049929 ENSMFAG00000033140 HLA-DRA (ENSMFAG00000032157) ENSMFAG00000058962 HLA-DRB5 (ENSMFAG00000000676) ENSMFAG00000054107 HLA-DQA1 (ENSMFAG00000002949) HLA-DOB (ENSMFAG00000003652) TAP2 (ENSMFAG00000037139) TAP1 (ENSMFAG00000041369) PSMB9 (ENSMFAG00000038128) HLA-DMB (ENSMFAG00000004018) #20 HLA-DMA (ENSMFAG00000042109) #21 ENSMFAG00000060572 BRD2 (ENSMFAG00000037520) #22 HLA-DOA (ENSMFAG00000058905) #23 RXRB (ENSMFAG00000003583) #28 HSD17B8 (ENSMFAG00000037332) #30 SLC39A7 (ENSMFAG00000038848) #29 RING1 (ENSMFAG00000002610) #31 COL11A2 (ENSMFAG00000017491) #27 RPS18 (ENSMFAG00000032199) #33 B3GALT4 (ENSMFAG00000041942) WDR46 (ENSMFAG00000000475) #34 PFDN6 (ENSMFAG00000041216) #35 RGL2 (ENSMFAG00000039597) #36 TAPBP (ENSMFAG00000000942) #37 ZBTB22 (ENSMFAG00000011344) DAXX (ENSMFAG00000038728) ENSMFAG00000058856 Rhesus MODERN SPECIES 14 RNF5 (ENSMMUG00000018438) #15 AGER (ENSMMUG00000018442) #16 PBX2 (ENSMMUG00000018456) #17 GPSM3 (ENSMMUG00000018459) #18 NOTCH4 (ENSMMUG00000018461) #19 ENSMMUG00000029402 TSBP1 (ENSMMUG00000018425) MAMU-DRA (ENSMMUG00000039082) MAMU-DRB1 (ENSMMUG00000029799) ENSMMUG00000054826 MAMU-DOB (ENSMMUG00000011293) PSMB8 (ENSMMUG00000011301) PSMB9 (ENSMMUG00000011304) ENSMMUG00000063291 MAMU-DMB (ENSMMUG00000022626) #20 BRD2 (ENSMMUG00000023138) #22 MAMU-DOA (ENSMMUG00000015734) #23 ENSMMUG00000041095 ENSMMUG00000019371 #24 COL11A2 (ENSMMUG00000003850) #27 RXRB (ENSMMUG00000003858) #28 HSD17B8 (ENSMMUG00000003861) #30 SLC39A7 (ENSMMUG00000003859) #29 RING1 (ENSMMUG00000003863) #31 ENSMMUG00000003867 #33 VPS52 (ENSMMUG00000003864) #32 B3GALT4 (ENSMMUG00000064507) WDR46 (ENSMMUG00000003869) #34 PFDN6 (ENSMMUG00000003871) #35 RGL2 (ENSMMUG00000003872) #36 TAPBP (ENSMMUG00000003875) #37 Cercopithecinae_b ANCESTRAL SPECIES 18 ENSGT00530000064866 ENSGT00940000153251.b.a ENSGT00390000015391 ENSGT00940000155046.t ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353.h ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.n #24 ENSGT00940000162498.m #24 ENSGT00940000162390 #25 ENSGT00940000159762 #27 ENSGT00940000159208.B #28 ENSGT00940000160076 #29 ENSGT00940000160668 #30 ENSGT00940000161022 #31 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.n #33 ENSGT00940000161798 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 Cercopithecinae_d ANCESTRAL SPECIES 197 ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353.h ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00390000004757.`b.a ENSGT00940000160381 #20 ENSGT00940000161157 #21 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.n #24 ENSGT00940000162390 #25 Drill MODERN SPECIES 1605 HLA-DOB (ENSMLEG00000044332) TAP2 (ENSMLEG00000040111) PSMB8 (ENSMLEG00000028732) TAP1 (ENSMLEG00000042023) PSMB9 (ENSMLEG00000009919) ENSMLEG00000033307 HLA-DMB (ENSMLEG00000032921) #20 HLA-DMA (ENSMLEG00000039758) #21 ENSMLEG00000035779 ENSMLEG00000042296 #22 HLA-DOA (ENSMLEG00000037836) #23 ENSMLEG00000035946 #24 Sooty mangabey MODERN SPECIES 451 HLA-DQA1 (ENSCATG00000012156) HLA-DQB1 (ENSCATG00000030073) ENSCATG00000036138 TAP2 (ENSCATG00000038838) PSMB8 (ENSCATG00000024878) TAP1 (ENSCATG00000033980) PSMB9 (ENSCATG00000041856) ENSCATG00000037243 HLA-DMB (ENSCATG00000024024) #20 HLA-DMA (ENSCATG00000030669) #21 ENSCATG00000037729 ENSCATG00000034965 #22 HLA-DOA (ENSCATG00000035917) #23 ENSCATG00000024393 #24 HLA-DPB1 (ENSCATG00000038170) #25 Olive baboon MODERN SPECIES 16 CDSN (ENSPANG00000047914) PSORS1C2 (ENSPANG00000024487) ENSPANG00000049186 CCHCR1 (ENSPANG00000017010) TCF19 (ENSPANG00000024035) ENSPANG00000007627 ENSPANG00000044498 HLA-DOB (ENSPANG00000016388) TAP2 (ENSPANG00000015103) PSMB8 (ENSPANG00000016588) TAP1 (ENSPANG00000024178) PSMB9 (ENSPANG00000033974) HLA-DMB (ENSPANG00000019593) #20 HLA-DMA (ENSPANG00000026492) #21 ENSPANG00000035618 BRD2 (ENSPANG00000019626) #22 HLA-DOA (ENSPANG00000031879) #23 HLA-DPA1 (ENSPANG00000018967) #24 HLA-DPB1 (ENSPANG00000005764) #25 COL11A2 (ENSPANG00000009194) #27 RXRB (ENSPANG00000018527) #28 SLC39A7 (ENSPANG00000023633) #29 HSD17B8 (ENSPANG00000023634) #30 RING1 (ENSPANG00000023635) #31 VPS52 (ENSPANG00000026491) #32 RPS18 (ENSPANG00000029306) #33 B3GALT4 (ENSPANG00000040674) WDR46 (ENSPANG00000009193) #34 PFDN6 (ENSPANG00000025458) #35 RGL2 (ENSPANG00000023572) #36 TAPBP (ENSPANG00000022348) #37