Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000154993.m.a.b ENSGT00940000162892.a.a.a ENSGT00940000154723.b.m.b ENSGT00940000154993.m.a.a.a ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353 #14 ENSGT00940000160499 #15 ENSGT00940000157293 #16 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #26 ENSGT00940000159208.B #27 ENSGT00940000160076 #28 ENSGT00940000160668 #29 ENSGT00940000161022 #30 ENSGT00390000008815 #31 ENSGT00390000012691.c.b.n #32 ENSGT00940000161798 #33 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000154993.m.a.b ENSGT00940000162892.a.a.a ENSGT00940000154723.b.m.b ENSGT00940000154993.m.a.a.a ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353 #14 ENSGT00940000160499 #15 ENSGT00940000157293 #16 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #24 ENSGT00940000162390 #25 ENSGT00940000159762 #26 ENSGT00940000159208.B #27 ENSGT00940000160076 #28 ENSGT00940000160668 #29 ENSGT00940000161022 #30 ENSGT00390000008815 #31 ENSGT00390000012691.c.b.n #32 ENSGT00940000161798 #33 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00910000147736 Cercopithecinae_b ANCESTRAL SPECIES 18 ENSGT00530000064866 ENSGT00940000153251.b.a #10 ENSGT00390000015391 #11 ENSGT00940000155046.t ##12 ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353.h #14 ENSGT00940000160499 #15 ENSGT00940000157293 #16 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.n ##24 ENSGT00940000162498.m #24 ENSGT00940000162390 #25 ENSGT00940000159762 #26 ENSGT00940000159208.B #27 ENSGT00940000160076 #28 ENSGT00940000160668 #29 ENSGT00940000161022 #30 ENSGT00390000008815 #31 ENSGT00390000012691.c.b.n #32 ENSGT00940000161798 #33 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 Olive baboon MODERN SPECIES 16 CDSN (ENSPANG00000047914) #7 PSORS1C2 (ENSPANG00000024487) #8 ENSPANG00000049186 #9 CCHCR1 (ENSPANG00000017010) #10 TCF19 (ENSPANG00000024035) #11 ENSPANG00000007627 #12 ENSPANG00000044498 #13 HLA-DOB (ENSPANG00000016388) #14 TAP2 (ENSPANG00000015103) #15 PSMB8 (ENSPANG00000016588) #16 TAP1 (ENSPANG00000024178) #17 PSMB9 (ENSPANG00000033974) #18 HLA-DMB (ENSPANG00000019593) #19 HLA-DMA (ENSPANG00000026492) #20 ENSPANG00000035618 #21 BRD2 (ENSPANG00000019626) #22 HLA-DOA (ENSPANG00000031879) #23 HLA-DPA1 (ENSPANG00000018967) #24 HLA-DPB1 (ENSPANG00000005764) #25 COL11A2 (ENSPANG00000009194) #26 RXRB (ENSPANG00000018527) #27 SLC39A7 (ENSPANG00000023633) #28 HSD17B8 (ENSPANG00000023634) #29 RING1 (ENSPANG00000023635) #30 VPS52 (ENSPANG00000026491) #31 RPS18 (ENSPANG00000029306) #32 B3GALT4 (ENSPANG00000040674) #33 WDR46 (ENSPANG00000009193) #34 PFDN6 (ENSPANG00000025458) #35 RGL2 (ENSPANG00000023572) #36 TAPBP (ENSPANG00000022348) #37 Cercopithecinae_d ANCESTRAL SPECIES 197 ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353.h #14 ENSGT00940000160499 #15 ENSGT00940000157293 #16 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.n ##24 ENSGT00940000162390 #25 Drill MODERN SPECIES 1605 HLA-DOB (ENSMLEG00000044332) #14 TAP2 (ENSMLEG00000040111) #15 PSMB8 (ENSMLEG00000028732) #16 TAP1 (ENSMLEG00000042023) #17 PSMB9 (ENSMLEG00000009919) #18 ENSMLEG00000033307 HLA-DMB (ENSMLEG00000032921) #19 HLA-DMA (ENSMLEG00000039758) #20 ENSMLEG00000035779 #21 ENSMLEG00000042296 #22 HLA-DOA (ENSMLEG00000037836) #23 ENSMLEG00000035946 ##24 Sooty mangabey MODERN SPECIES 451 HLA-DQA1 (ENSCATG00000012156) HLA-DQB1 (ENSCATG00000030073) ENSCATG00000036138 #14 TAP2 (ENSCATG00000038838) #15 PSMB8 (ENSCATG00000024878) #16 TAP1 (ENSCATG00000033980) #17 PSMB9 (ENSCATG00000041856) #18 ENSCATG00000037243 HLA-DMB (ENSCATG00000024024) #19 HLA-DMA (ENSCATG00000030669) #20 ENSCATG00000037729 #21 ENSCATG00000034965 #22 HLA-DOA (ENSCATG00000035917) #23 ENSCATG00000024393 ##24 HLA-DPB1 (ENSCATG00000038170) #25 Macaca ANCESTRAL SPECIES 9 ENSGT00530000064839 ENSGT00940000160997 ENSGT00940000154993.m.a.a.b.b ENSGT00940000154993.m.b.a.b ENSGT00940000154993.m.a.a.a ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353 #14 ENSGT00940000160499 #15 ENSGT00940000157293 #16 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.k #24 ENSGT00940000162390 #25 ENSGT00940000159762 #26 ENSGT00940000159208.B #27 ENSGT00940000160076 #28 ENSGT00940000160668 #29 ENSGT00940000161022 #30 ENSGT00390000008815 #31 ENSGT00390000012691.c.b.m.b ##32 ENSGT00940000161798 #33 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00910000147736 Pig-tailed macaque MODERN SPECIES 528 ENSMNEG00000020869 ENSMNEG00000018617 ENSMNEG00000044119 HLA-DQA1 (ENSMNEG00000038603) HLA-DQB1 (ENSMNEG00000027969) HLA-DOB (ENSMNEG00000043598) #14 TAP2 (ENSMNEG00000041413) #15 PSMB8 (ENSMNEG00000044942) #16 TAP1 (ENSMNEG00000041518) #17 PSMB9 (ENSMNEG00000038721) #18 ENSMNEG00000036723 ENSMNEG00000035658 HLA-DMB (ENSMNEG00000044507) #19 HLA-DMA (ENSMNEG00000032904) #20 ENSMNEG00000039758 #21 BRD2 (ENSMNEG00000030743) #22 HLA-DOA (ENSMNEG00000008508) #23 HLA-DPA1 (ENSMNEG00000040889) #24 HLA-DPB1 (ENSMNEG00000029725) #25 ENSMNEG00000010287 #25 COL11A2 (ENSMNEG00000022236) #26 RXRB (ENSMNEG00000034252) #27 SLC39A7 (ENSMNEG00000034647) #28 HSD17B8 (ENSMNEG00000036244) #29 RING1 (ENSMNEG00000042339) #30 VPS52 (ENSMNEG00000038741) #31 ENSMNEG00000045500 ##32 WDR46 (ENSMNEG00000034609) #34 PFDN6 (ENSMNEG00000030272) #35 RGL2 (ENSMNEG00000039053) #36 ENSMNEG00000013214 Macaca_a ANCESTRAL SPECIES 9 ENSGT00890000139566 ENSGT00940000160293 ENSGT00390000002471 ENSGT00940000163287 ENSGT00950000183123.h.b ENSGT00530000064839 ENSGT00940000160997 ENSGT00940000154993.m.a.b ENSGT00940000162353 #14 ENSGT00940000160499 #15 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.k #24 ENSGT00940000159762 #26 ENSGT00940000159208.B #27 ENSGT00940000160668 #29 ENSGT00940000160076 #28 ENSGT00940000161022 #30 ENSGT00390000008815 #31 ENSGT00390000012691.c.b.m.b ##32 ENSGT00940000161798 #33 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 ENSGT00940000160991 Crab-eating macaque MODERN SPECIES 14 ENSMFAG00000033054 ENSMFAG00000049929 ENSMFAG00000033140 HLA-DRA (ENSMFAG00000032157) ENSMFAG00000058962 HLA-DRB5 (ENSMFAG00000000676) ENSMFAG00000054107 HLA-DQA1 (ENSMFAG00000002949) HLA-DOB (ENSMFAG00000003652) #14 TAP2 (ENSMFAG00000037139) #15 TAP1 (ENSMFAG00000041369) #17 PSMB9 (ENSMFAG00000038128) #18 HLA-DMB (ENSMFAG00000004018) #19 HLA-DMA (ENSMFAG00000042109) #20 ENSMFAG00000060572 #21 BRD2 (ENSMFAG00000037520) #22 HLA-DOA (ENSMFAG00000058905) #23 RXRB (ENSMFAG00000003583) #27 HSD17B8 (ENSMFAG00000037332) #29 SLC39A7 (ENSMFAG00000038848) #28 RING1 (ENSMFAG00000002610) #30 COL11A2 (ENSMFAG00000017491) #26 RPS18 (ENSMFAG00000032199) #32 B3GALT4 (ENSMFAG00000041942) #33 WDR46 (ENSMFAG00000000475) #34 PFDN6 (ENSMFAG00000041216) #35 RGL2 (ENSMFAG00000039597) #36 TAPBP (ENSMFAG00000000942) #37 ZBTB22 (ENSMFAG00000011344) DAXX (ENSMFAG00000038728) ENSMFAG00000058856 Rhesus MODERN SPECIES 14 RNF5 (ENSMMUG00000018438) AGER (ENSMMUG00000018442) PBX2 (ENSMMUG00000018456) GPSM3 (ENSMMUG00000018459) NOTCH4 (ENSMMUG00000018461) ENSMMUG00000029402 TSBP1 (ENSMMUG00000018425) MAMU-DRA (ENSMMUG00000039082) MAMU-DRB1 (ENSMMUG00000029799) ENSMMUG00000054826 MAMU-DOB (ENSMMUG00000011293) #15 PSMB8 (ENSMMUG00000011301) #17 PSMB9 (ENSMMUG00000011304) #18 ENSMMUG00000063291 MAMU-DMB (ENSMMUG00000022626) #19 BRD2 (ENSMMUG00000023138) #22 MAMU-DOA (ENSMMUG00000015734) #23 ENSMMUG00000041095 ENSMMUG00000019371 #24 COL11A2 (ENSMMUG00000003850) #26 RXRB (ENSMMUG00000003858) #27 HSD17B8 (ENSMMUG00000003861) #29 SLC39A7 (ENSMMUG00000003859) #28 RING1 (ENSMMUG00000003863) #30 ENSMMUG00000003867 ##32 VPS52 (ENSMMUG00000003864) #31 B3GALT4 (ENSMMUG00000064507) #33 WDR46 (ENSMMUG00000003869) #34 PFDN6 (ENSMMUG00000003871) #35 RGL2 (ENSMMUG00000003872) #36 TAPBP (ENSMMUG00000003875) #37 Vervet Monkey MODERN SPECIES 8 AGER (ENSCSAG00000009312) PBX2 (ENSCSAG00000009322) GPSM3 (ENSCSAG00000009326) NOTCH4 (ENSCSAG00000009351) HLA-DRA (ENSCSAG00000009368) ENSCSAG00000009375 HLA-DRB1 (ENSCSAG00000009383) HLA-DQA1 (ENSCSAG00000009389) HLA-DQB1 (ENSCSAG00000009394) HLA-DOB (ENSCSAG00000009402) #14 PSMB8 (ENSCSAG00000009409) #16 TAP1 (ENSCSAG00000009417) #17 PSMB9 (ENSCSAG00000009427) #18 HLA-DMB (ENSCSAG00000009430) #19 HLA-DMA (ENSCSAG00000009436) #20 BRD2 (ENSCSAG00000009445) #22 HLA-DOA (ENSCSAG00000009452) #23 ENSCSAG00000009455 #24 ENSCSAG00000009461 #25 COL11A2 (ENSCSAG00000009488) #26 RXRB (ENSCSAG00000009510) #27 SLC39A7 (ENSCSAG00000009519) #28 HSD17B8 (ENSCSAG00000009530) #29 RING1 (ENSCSAG00000009538) #30 VPS52 (ENSCSAG00000009546) #31 B3GALT4 (ENSCSAG00000019308) #33 WDR46 (ENSCSAG00000009552) #34 PFDN6 (ENSCSAG00000009556) #35 RGL2 (ENSCSAG00000009562) #36 TAPBP (ENSCSAG00000009568) #37 ZBTB22 (ENSCSAG00000019307) Cercopithecinae ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a ##22 Cercopithecinae_d DUPLICATION Cercopithecinae_d ANCESTRAL SPECIES 68 ENSGT00390000004799 ENSGT00390000018900 ENSGT00940000153165.a.b.a ENSGT00940000164696 ENSGT00940000164691.a.b ENSGT00940000164793 ENSGT00940000154251.A.b.a.b.a ENSGT00950000183206.b.c.a.b.a.a ENSGT00940000161967 ENSGT00940000162415 ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000158134.A ENSGT00940000162666 ENSGT00940000162246 ENSGT01090000259995.b.b.b ENSGT00940000153385.b.a.b.qc.a.a ##22 ENSGT01090000259995.b.b.a.b.o ENSGT01090000259995.b.b.a.a.b.o.a.b ENSGT01090000259995.b.b.a.a.b.p.a Drill MODERN SPECIES 279 TRIM58 (ENSMLEG00000030196) OR2AJ1 (ENSMLEG00000005755) ENSMLEG00000031562 ##22 ENSMLEG00000011380 ENSMLEG00000037918 ENSMLEG00000027254 Sooty mangabey MODERN SPECIES 301 ENSCATG00000030246 ZNF124 (ENSCATG00000035310) ENSCATG00000038074 ENSCATG00000005868 ZNF496 (ENSCATG00000031929) NLRP3 (ENSCATG00000029371) OR2B11 (ENSCATG00000043410) GCSAML (ENSCATG00000030752) OR13G1 (ENSCATG00000043354) TRIM58 (ENSCATG00000038759) ENSCATG00000030481 ENSCATG00000039502 ##22 ENSCATG00000034652 ENSCATG00000017262 ENSCATG00000015507 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a.b ##22 Sooty mangabey MODERN SPECIES 333 SMTNL1 (ENSCATG00000009203) TIMM10 (ENSCATG00000030369) SLC43A1 (ENSCATG00000036597) RTN4RL2 (ENSCATG00000029746) SLC43A3 (ENSCATG00000031268) PRG2 (ENSCATG00000039658) PRG3 (ENSCATG00000011827) P2RX3 (ENSCATG00000028693) SSRP1 (ENSCATG00000041377) TNKS1BP1 (ENSCATG00000037546) APLNR (ENSCATG00000019437) LRRC55 (ENSCATG00000010960) ENSCATG00000013388 OR9G4 (ENSCATG00000019474) ENSCATG00000019867 ENSCATG00000031014 ##22 OR5M9 (ENSCATG00000020470) OR8J1 (ENSCATG00000014575) OR8K1 (ENSCATG00000018484) ENSCATG00000029525 ENSCATG00000018722 OR5I1 (ENSCATG00000016816) OR4S2 (ENSCATG00000018258) ENSCATG00000039191 OR4A8 (ENSCATG00000000891)