Cercopithecinae DUPLICATION Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000154993.m.a.b #15 ENSGT00940000162892.a.a.a ENSGT00940000154723.b.m.b ENSGT00940000154993.m.a.a.a ##15 ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353 ENSGT00940000160499 #17 ENSGT00940000157293 ENSGT00940000159023 #18 ENSGT00940000159897 #19 ENSGT00390000004757.`b.a ENSGT00940000160381 #21 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #25 ENSGT00940000162390 ENSGT00940000159762 #26 ENSGT00940000159208.B #27 ENSGT00940000160076 #29 ENSGT00940000160668 #28 ENSGT00940000161022 #30 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.n ##31 ENSGT00940000161798 #33 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000154993.m.a.b #15 ENSGT00940000162892.a.a.a ENSGT00940000154723.b.m.b ENSGT00940000154993.m.a.a.a ##15 ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353 ENSGT00940000160499 #17 ENSGT00940000157293 ENSGT00940000159023 #18 ENSGT00940000159897 #19 ENSGT00390000004757.`b.a ENSGT00940000160381 #21 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 #25 ENSGT00940000162390 ENSGT00940000159762 #26 ENSGT00940000159208.B #27 ENSGT00940000160076 #29 ENSGT00940000160668 #28 ENSGT00940000161022 #30 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.n ##31 ENSGT00940000161798 #33 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00910000147736 Macaca ANCESTRAL SPECIES 9 ENSGT00530000064839 #13 ENSGT00940000160997 #14 ENSGT00940000154993.m.a.a.b.b ##15 ENSGT00940000154993.m.b.a.b ##15 ENSGT00940000154993.m.a.a.a ##15 ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353 ENSGT00940000160499 #17 ENSGT00940000157293 ENSGT00940000159023 #18 ENSGT00940000159897 #19 ENSGT00940000160381 #21 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.k #25 ENSGT00940000162390 ENSGT00940000159762 #26 ENSGT00940000159208.B #27 ENSGT00940000160076 #29 ENSGT00940000160668 #28 ENSGT00940000161022 #30 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.m.b #31 ENSGT00940000161798 #33 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00910000147736 Macaca_a ANCESTRAL SPECIES 9 ENSGT00890000139566 #8 ENSGT00940000160293 #9 ENSGT00390000002471 #10 ENSGT00940000163287 #11 ENSGT00950000183123.h.b #12 ENSGT00530000064839 #13 ENSGT00940000160997 #14 ENSGT00940000154993.m.a.b #15 ENSGT00940000162353 ENSGT00940000160499 #17 ENSGT00940000159023 #18 ENSGT00940000159897 #19 ENSGT00940000160381 #21 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.k #25 ENSGT00940000159762 #26 ENSGT00940000159208.B #27 ENSGT00940000160668 #28 ENSGT00940000160076 #29 ENSGT00940000161022 #30 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.m.b #31 ENSGT00940000161798 #33 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 ENSGT00940000159200 #37 ENSGT00940000160991 Rhesus MODERN SPECIES 14 RNF5 (ENSMMUG00000018438) #7 AGER (ENSMMUG00000018442) #8 PBX2 (ENSMMUG00000018456) #9 GPSM3 (ENSMMUG00000018459) #10 NOTCH4 (ENSMMUG00000018461) #11 ENSMMUG00000029402 #12 TSBP1 (ENSMMUG00000018425) #13 MAMU-DRA (ENSMMUG00000039082) #14 MAMU-DRB1 (ENSMMUG00000029799) #15 ENSMMUG00000054826 #16 MAMU-DOB (ENSMMUG00000011293) #17 PSMB8 (ENSMMUG00000011301) #18 PSMB9 (ENSMMUG00000011304) #19 ENSMMUG00000063291 #20 MAMU-DMB (ENSMMUG00000022626) #21 BRD2 (ENSMMUG00000023138) #22 MAMU-DOA (ENSMMUG00000015734) #23 ENSMMUG00000041095 #24 ENSMMUG00000019371 #25 COL11A2 (ENSMMUG00000003850) #26 RXRB (ENSMMUG00000003858) #27 HSD17B8 (ENSMMUG00000003861) #28 SLC39A7 (ENSMMUG00000003859) #29 RING1 (ENSMMUG00000003863) #30 ENSMMUG00000003867 #31 VPS52 (ENSMMUG00000003864) #32 B3GALT4 (ENSMMUG00000064507) #33 WDR46 (ENSMMUG00000003869) #34 PFDN6 (ENSMMUG00000003871) #35 RGL2 (ENSMMUG00000003872) #36 TAPBP (ENSMMUG00000003875) #37 Crab-eating macaque MODERN SPECIES 14 ENSMFAG00000033054 #11 ENSMFAG00000049929 ENSMFAG00000033140 #13 HLA-DRA (ENSMFAG00000032157) #14 ENSMFAG00000058962 ##15 HLA-DRB5 (ENSMFAG00000000676) #15 ENSMFAG00000054107 HLA-DQA1 (ENSMFAG00000002949) HLA-DOB (ENSMFAG00000003652) TAP2 (ENSMFAG00000037139) #17 TAP1 (ENSMFAG00000041369) #18 PSMB9 (ENSMFAG00000038128) #19 HLA-DMB (ENSMFAG00000004018) #21 HLA-DMA (ENSMFAG00000042109) ENSMFAG00000060572 BRD2 (ENSMFAG00000037520) #22 HLA-DOA (ENSMFAG00000058905) #23 RXRB (ENSMFAG00000003583) #27 HSD17B8 (ENSMFAG00000037332) #28 SLC39A7 (ENSMFAG00000038848) #29 RING1 (ENSMFAG00000002610) #30 COL11A2 (ENSMFAG00000017491) #26 RPS18 (ENSMFAG00000032199) ##31 B3GALT4 (ENSMFAG00000041942) #33 WDR46 (ENSMFAG00000000475) #34 PFDN6 (ENSMFAG00000041216) #35 RGL2 (ENSMFAG00000039597) #36 TAPBP (ENSMFAG00000000942) #37 ZBTB22 (ENSMFAG00000011344) DAXX (ENSMFAG00000038728) ENSMFAG00000058856 Pig-tailed macaque MODERN SPECIES 528 ENSMNEG00000020869 ##15 ENSMNEG00000018617 ENSMNEG00000044119 ##15 HLA-DQA1 (ENSMNEG00000038603) HLA-DQB1 (ENSMNEG00000027969) HLA-DOB (ENSMNEG00000043598) TAP2 (ENSMNEG00000041413) #17 PSMB8 (ENSMNEG00000044942) TAP1 (ENSMNEG00000041518) #18 PSMB9 (ENSMNEG00000038721) #19 ENSMNEG00000036723 #20 ENSMNEG00000035658 HLA-DMB (ENSMNEG00000044507) #21 HLA-DMA (ENSMNEG00000032904) ENSMNEG00000039758 BRD2 (ENSMNEG00000030743) #22 HLA-DOA (ENSMNEG00000008508) #23 HLA-DPA1 (ENSMNEG00000040889) #25 HLA-DPB1 (ENSMNEG00000029725) ENSMNEG00000010287 COL11A2 (ENSMNEG00000022236) #26 RXRB (ENSMNEG00000034252) #27 SLC39A7 (ENSMNEG00000034647) #29 HSD17B8 (ENSMNEG00000036244) #28 RING1 (ENSMNEG00000042339) #30 VPS52 (ENSMNEG00000038741) #32 ENSMNEG00000045500 #31 WDR46 (ENSMNEG00000034609) #34 PFDN6 (ENSMNEG00000030272) #35 RGL2 (ENSMNEG00000039053) #36 ENSMNEG00000013214 Cercopithecinae_b ANCESTRAL SPECIES 18 ENSGT00530000064866 ENSGT00940000153251.b.a ENSGT00390000015391 ENSGT00940000155046.t ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353.h ENSGT00940000160499 #17 ENSGT00940000157293 ENSGT00940000159023 #18 ENSGT00940000159897 #19 ENSGT00390000004757.`b.a ENSGT00940000160381 #21 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.n #25 ENSGT00940000162498.m #25 ENSGT00940000162390 ENSGT00940000159762 #26 ENSGT00940000159208.B #27 ENSGT00940000160076 #29 ENSGT00940000160668 #28 ENSGT00940000161022 #30 ENSGT00390000008815 #32 ENSGT00390000012691.c.b.n ##31 ENSGT00940000161798 #33 ENSGT00390000007075 #34 ENSGT00390000010512 #35 ENSGT00940000161403 #36 Cercopithecinae_d ANCESTRAL SPECIES 197 ENSGT00940000162892.a.a.b ENSGT00940000154723.b.m.a ENSGT00940000162353.h ENSGT00940000160499 #17 ENSGT00940000157293 ENSGT00940000159023 #18 ENSGT00940000159897 #19 ENSGT00390000004757.`b.a ENSGT00940000160381 #21 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.n #25 ENSGT00940000162390 Drill MODERN SPECIES 1605 HLA-DOB (ENSMLEG00000044332) TAP2 (ENSMLEG00000040111) #17 PSMB8 (ENSMLEG00000028732) TAP1 (ENSMLEG00000042023) #18 PSMB9 (ENSMLEG00000009919) #19 ENSMLEG00000033307 HLA-DMB (ENSMLEG00000032921) #21 HLA-DMA (ENSMLEG00000039758) ENSMLEG00000035779 ENSMLEG00000042296 #22 HLA-DOA (ENSMLEG00000037836) #23 ENSMLEG00000035946 #25 Sooty mangabey MODERN SPECIES 451 HLA-DQA1 (ENSCATG00000012156) HLA-DQB1 (ENSCATG00000030073) ENSCATG00000036138 TAP2 (ENSCATG00000038838) #17 PSMB8 (ENSCATG00000024878) TAP1 (ENSCATG00000033980) #18 PSMB9 (ENSCATG00000041856) #19 ENSCATG00000037243 HLA-DMB (ENSCATG00000024024) #21 HLA-DMA (ENSCATG00000030669) ENSCATG00000037729 ENSCATG00000034965 #22 HLA-DOA (ENSCATG00000035917) #23 ENSCATG00000024393 #25 HLA-DPB1 (ENSCATG00000038170) Olive baboon MODERN SPECIES 16 CDSN (ENSPANG00000047914) PSORS1C2 (ENSPANG00000024487) ENSPANG00000049186 CCHCR1 (ENSPANG00000017010) TCF19 (ENSPANG00000024035) ENSPANG00000007627 ENSPANG00000044498 HLA-DOB (ENSPANG00000016388) TAP2 (ENSPANG00000015103) #17 PSMB8 (ENSPANG00000016588) TAP1 (ENSPANG00000024178) #18 PSMB9 (ENSPANG00000033974) #19 HLA-DMB (ENSPANG00000019593) #21 HLA-DMA (ENSPANG00000026492) ENSPANG00000035618 BRD2 (ENSPANG00000019626) #22 HLA-DOA (ENSPANG00000031879) #23 HLA-DPA1 (ENSPANG00000018967) #25 HLA-DPB1 (ENSPANG00000005764) COL11A2 (ENSPANG00000009194) #26 RXRB (ENSPANG00000018527) #27 SLC39A7 (ENSPANG00000023633) #29 HSD17B8 (ENSPANG00000023634) #28 RING1 (ENSPANG00000023635) #30 VPS52 (ENSPANG00000026491) #32 RPS18 (ENSPANG00000029306) ##31 B3GALT4 (ENSPANG00000040674) #33 WDR46 (ENSPANG00000009193) #34 PFDN6 (ENSPANG00000025458) #35 RGL2 (ENSPANG00000023572) #36 TAPBP (ENSPANG00000022348) #37 Vervet Monkey MODERN SPECIES 8 AGER (ENSCSAG00000009312) #8 PBX2 (ENSCSAG00000009322) #9 GPSM3 (ENSCSAG00000009326) #10 NOTCH4 (ENSCSAG00000009351) #11 HLA-DRA (ENSCSAG00000009368) #14 ENSCSAG00000009375 HLA-DRB1 (ENSCSAG00000009383) ##15 HLA-DQA1 (ENSCSAG00000009389) HLA-DQB1 (ENSCSAG00000009394) HLA-DOB (ENSCSAG00000009402) PSMB8 (ENSCSAG00000009409) TAP1 (ENSCSAG00000009417) #18 PSMB9 (ENSCSAG00000009427) #19 HLA-DMB (ENSCSAG00000009430) #21 HLA-DMA (ENSCSAG00000009436) BRD2 (ENSCSAG00000009445) #22 HLA-DOA (ENSCSAG00000009452) #23 ENSCSAG00000009455 #25 ENSCSAG00000009461 COL11A2 (ENSCSAG00000009488) #26 RXRB (ENSCSAG00000009510) #27 SLC39A7 (ENSCSAG00000009519) #29 HSD17B8 (ENSCSAG00000009530) #28 RING1 (ENSCSAG00000009538) #30 VPS52 (ENSCSAG00000009546) #32 B3GALT4 (ENSCSAG00000019308) #33 WDR46 (ENSCSAG00000009552) #34 PFDN6 (ENSCSAG00000009556) #35 RGL2 (ENSCSAG00000009562) #36 TAPBP (ENSCSAG00000009568) #37 ZBTB22 (ENSCSAG00000019307) Cercopithecinae ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a ##22 Cercopithecinae_d DUPLICATION Cercopithecinae_d ANCESTRAL SPECIES 68 ENSGT00390000004799 ENSGT00390000018900 ENSGT00940000153165.a.b.a ENSGT00940000164696 ENSGT00940000164691.a.b ENSGT00940000164793 ENSGT00940000154251.A.b.a.b.a ENSGT00950000183206.b.c.a.b.a.a ENSGT00940000161967 ENSGT00940000162415 ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000158134.A ENSGT00940000162666 ENSGT00940000162246 ENSGT01090000259995.b.b.b ENSGT00940000153385.b.a.b.qc.a.a ##22 ENSGT01090000259995.b.b.a.b.o ENSGT01090000259995.b.b.a.a.b.o.a.b ENSGT01090000259995.b.b.a.a.b.p.a Drill MODERN SPECIES 279 TRIM58 (ENSMLEG00000030196) OR2AJ1 (ENSMLEG00000005755) ENSMLEG00000031562 ##22 ENSMLEG00000011380 ENSMLEG00000037918 ENSMLEG00000027254 Sooty mangabey MODERN SPECIES 301 ENSCATG00000030246 ZNF124 (ENSCATG00000035310) ENSCATG00000038074 ENSCATG00000005868 ZNF496 (ENSCATG00000031929) NLRP3 (ENSCATG00000029371) OR2B11 (ENSCATG00000043410) GCSAML (ENSCATG00000030752) OR13G1 (ENSCATG00000043354) TRIM58 (ENSCATG00000038759) ENSCATG00000030481 ENSCATG00000039502 ##22 ENSCATG00000034652 ENSCATG00000017262 ENSCATG00000015507 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a.b ##22 Sooty mangabey MODERN SPECIES 333 SMTNL1 (ENSCATG00000009203) TIMM10 (ENSCATG00000030369) SLC43A1 (ENSCATG00000036597) RTN4RL2 (ENSCATG00000029746) SLC43A3 (ENSCATG00000031268) PRG2 (ENSCATG00000039658) PRG3 (ENSCATG00000011827) P2RX3 (ENSCATG00000028693) SSRP1 (ENSCATG00000041377) TNKS1BP1 (ENSCATG00000037546) APLNR (ENSCATG00000019437) LRRC55 (ENSCATG00000010960) ENSCATG00000013388 OR9G4 (ENSCATG00000019474) ENSCATG00000019867 ENSCATG00000031014 ##22 OR5M9 (ENSCATG00000020470) OR8J1 (ENSCATG00000014575) OR8K1 (ENSCATG00000018484) ENSCATG00000029525 ENSCATG00000018722 OR5I1 (ENSCATG00000016816) OR4S2 (ENSCATG00000018258) ENSCATG00000039191 OR4A8 (ENSCATG00000000891) Cercopithecinae ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.pc ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.pc ##22 Macaca ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.pc ##22 Macaca_a ANCESTRAL SPECIES 1 ENSGT00940000157246 ENSGT01030000234542.b.b.a.a.a.b.u ENSGT01060000248581.A.b.l ENSGT00940000164421.c ENSGT01100000263561.C.d.a.a ENSGT01100000263561.C.d.a.b.a ENSGT00940000164421.d ENSGT01060000248581.A.b.k ENSGT00940000154646.C.n.a ENSGT00940000161507 ENSGT00940000158718 ENSGT00940000161423 ENSGT00940000159979 ENSGT00530000063777.a.a.a ENSGT00530000063777.a.a.b ENSGT00940000153385.b.a.b.pc ##22 ENSGT00940000162790.a ENSGT00940000162086 ENSGT00940000160234 ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT00940000162852.a ENSGT00940000162117 ENSGT00390000003207.a ENSGT00940000159972 ENSGT00940000162084 ENSGT00940000153523.j ENSGT00950000183216.d ENSGT00940000153523.i.b ENSGT00940000162597 ENSGT00940000163161 Crab-eating macaque MODERN SPECIES 10 RAB8A (ENSMFAG00000035674) ENSMFAG00000042469 ENSMFAG00000018623 CYP4F11 (ENSMFAG00000039188) OR10H5 (ENSMFAG00000054868) ENSMFAG00000054713 CYP4F57 (ENSMFAG00000045394) ENSMFAG00000052137 ENSMFAG00000053879 CYP4F22 (ENSMFAG00000043198) PGLYRP2 (ENSMFAG00000024296) WIZ (ENSMFAG00000039361) ENSMFAG00000051652 AKAP8L (ENSMFAG00000045237) AKAP8 (ENSMFAG00000042432) ENSMFAG00000030806 ##22 EPHX3 (ENSMFAG00000001020) ILVBL (ENSMFAG00000030909) SYDE1 (ENSMFAG00000037133) OR1I1 (ENSMFAG00000049100) CASP14 (ENSMFAG00000045231) CCDC105 (ENSMFAG00000039156) SLC1A6 (ENSMFAG00000003076) OR7C2 (ENSMFAG00000034243) ENSMFAG00000057232 ENSMFAG00000047405 ENSMFAG00000058125 ZNF333 (ENSMFAG00000035483) ADGRE2 (ENSMFAG00000038126) CLEC17A (ENSMFAG00000043558) NDUFB7 (ENSMFAG00000043529)