Catarrhini ANCESTRAL SPECIES 5 ENSGT00940000154993.m.b ##11 ENSGT00940000154993.m.a.b #12 ENSGT00940000162892.a.a #14 ENSGT00940000154723.b.m.a ENSGT00940000162892.a.b ##14 ENSGT00940000154723.b.n ENSGT00940000162353 #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 ENSGT00940000162390 ENSGT00940000159762 #28 ENSGT00940000159208.B #24 ENSGT00940000160076 #26 ENSGT00940000160668 #25 ENSGT00940000161022 #27 ENSGT00390000008815 ENSGT00390000012691.c.b.n #29 ENSGT00940000161798 #30 ENSGT00390000007075 #31 ENSGT00390000010512 #32 ENSGT00940000161403 #33 ENSGT00940000159200 #34 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000154993.m.b ##11 ENSGT00940000154993.m.a.b #12 ENSGT00940000162892.a.a.a #14 ENSGT00940000154723.b.m.b ENSGT00940000162892.a.a.b ##14 ENSGT00940000154723.b.m.a ENSGT00940000162353 #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 ENSGT00940000162390 ENSGT00940000159762 #28 ENSGT00940000159208.B #24 ENSGT00940000160076 #26 ENSGT00940000160668 #25 ENSGT00940000161022 #27 ENSGT00390000008815 ENSGT00390000012691.c.b.n #29 ENSGT00940000161798 #30 ENSGT00390000007075 #31 ENSGT00390000010512 #32 ENSGT00940000161403 #33 ENSGT00940000159200 #34 Cercopithecinae DUPLICATION Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000154993.m.a.b #12 ENSGT00940000162892.a.a.a #14 ENSGT00940000154723.b.m.b ENSGT00940000154993.m.a.a.a ##11 ENSGT00940000162892.a.a.b ##14 ENSGT00940000154723.b.m.a ENSGT00940000162353 #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 ENSGT00940000162390 ENSGT00940000159762 #28 ENSGT00940000159208.B #24 ENSGT00940000160076 #26 ENSGT00940000160668 #25 ENSGT00940000161022 #27 ENSGT00390000008815 ENSGT00390000012691.c.b.n #29 ENSGT00940000161798 #30 ENSGT00390000007075 #31 ENSGT00390000010512 #32 ENSGT00940000161403 #33 ENSGT00940000159200 #34 Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000154993.m.a.b #12 ENSGT00940000162892.a.a.a #14 ENSGT00940000154723.b.m.b ENSGT00940000154993.m.a.a.a ##11 ENSGT00940000162892.a.a.b ##14 ENSGT00940000154723.b.m.a ENSGT00940000162353 #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 ENSGT00940000162390 ENSGT00940000159762 #28 ENSGT00940000159208.B #24 ENSGT00940000160076 #26 ENSGT00940000160668 #25 ENSGT00940000161022 #27 ENSGT00390000008815 ENSGT00390000012691.c.b.n #29 ENSGT00940000161798 #30 ENSGT00390000007075 #31 ENSGT00390000010512 #32 ENSGT00940000161403 #33 ENSGT00910000147736 Macaca ANCESTRAL SPECIES 9 ENSGT00530000064839 #9 ENSGT00940000160997 #10 ENSGT00940000154993.m.a.a.b.b ##11 ENSGT00940000154993.m.b.a.b ##11 ENSGT00940000154993.m.a.a.a ##11 ENSGT00940000162892.a.a.b ##14 ENSGT00940000154723.b.m.a ENSGT00940000162353 #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.k ENSGT00940000162390 ENSGT00940000159762 #28 ENSGT00940000159208.B #24 ENSGT00940000160076 #26 ENSGT00940000160668 #25 ENSGT00940000161022 #27 ENSGT00390000008815 ENSGT00390000012691.c.b.m.b ##29 ENSGT00940000161798 #30 ENSGT00390000007075 #31 ENSGT00390000010512 #32 ENSGT00940000161403 #33 ENSGT00910000147736 Macaca_a ANCESTRAL SPECIES 9 ENSGT00890000139566 ENSGT00940000160293 ENSGT00390000002471 ENSGT00940000163287 #7 ENSGT00950000183123.h.b ENSGT00530000064839 #9 ENSGT00940000160997 #10 ENSGT00940000154993.m.a.b #12 ENSGT00940000162353 #15 ENSGT00940000160499 #16 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.k ENSGT00940000159762 #28 ENSGT00940000159208.B #24 ENSGT00940000160668 #25 ENSGT00940000160076 #26 ENSGT00940000161022 #27 ENSGT00390000008815 ENSGT00390000012691.c.b.m.b ##29 ENSGT00940000161798 #30 ENSGT00390000007075 #31 ENSGT00390000010512 #32 ENSGT00940000161403 #33 ENSGT00940000159200 #34 ENSGT00940000160991 #35 Crab-eating macaque MODERN SPECIES 14 ENSMFAG00000033054 #7 ENSMFAG00000049929 #8 ENSMFAG00000033140 #9 HLA-DRA (ENSMFAG00000032157) #10 ENSMFAG00000058962 #11 HLA-DRB5 (ENSMFAG00000000676) #12 ENSMFAG00000054107 #13 HLA-DQA1 (ENSMFAG00000002949) #14 HLA-DOB (ENSMFAG00000003652) #15 TAP2 (ENSMFAG00000037139) #16 TAP1 (ENSMFAG00000041369) #17 PSMB9 (ENSMFAG00000038128) #18 HLA-DMB (ENSMFAG00000004018) #19 HLA-DMA (ENSMFAG00000042109) #20 ENSMFAG00000060572 #21 BRD2 (ENSMFAG00000037520) #22 HLA-DOA (ENSMFAG00000058905) #23 RXRB (ENSMFAG00000003583) #24 HSD17B8 (ENSMFAG00000037332) #25 SLC39A7 (ENSMFAG00000038848) #26 RING1 (ENSMFAG00000002610) #27 COL11A2 (ENSMFAG00000017491) #28 RPS18 (ENSMFAG00000032199) #29 B3GALT4 (ENSMFAG00000041942) #30 WDR46 (ENSMFAG00000000475) #31 PFDN6 (ENSMFAG00000041216) #32 RGL2 (ENSMFAG00000039597) #33 TAPBP (ENSMFAG00000000942) #34 ZBTB22 (ENSMFAG00000011344) #35 DAXX (ENSMFAG00000038728) #36 ENSMFAG00000058856 #37 Rhesus MODERN SPECIES 14 RNF5 (ENSMMUG00000018438) AGER (ENSMMUG00000018442) PBX2 (ENSMMUG00000018456) GPSM3 (ENSMMUG00000018459) NOTCH4 (ENSMMUG00000018461) #7 ENSMMUG00000029402 TSBP1 (ENSMMUG00000018425) #9 MAMU-DRA (ENSMMUG00000039082) #10 MAMU-DRB1 (ENSMMUG00000029799) #12 ENSMMUG00000054826 MAMU-DOB (ENSMMUG00000011293) #16 PSMB8 (ENSMMUG00000011301) #17 PSMB9 (ENSMMUG00000011304) #18 ENSMMUG00000063291 MAMU-DMB (ENSMMUG00000022626) #19 BRD2 (ENSMMUG00000023138) #22 MAMU-DOA (ENSMMUG00000015734) #23 ENSMMUG00000041095 ENSMMUG00000019371 COL11A2 (ENSMMUG00000003850) #28 RXRB (ENSMMUG00000003858) #24 HSD17B8 (ENSMMUG00000003861) #25 SLC39A7 (ENSMMUG00000003859) #26 RING1 (ENSMMUG00000003863) #27 ENSMMUG00000003867 ##29 VPS52 (ENSMMUG00000003864) B3GALT4 (ENSMMUG00000064507) #30 WDR46 (ENSMMUG00000003869) #31 PFDN6 (ENSMMUG00000003871) #32 RGL2 (ENSMMUG00000003872) #33 TAPBP (ENSMMUG00000003875) #34 Pig-tailed macaque MODERN SPECIES 528 ENSMNEG00000020869 #11 ENSMNEG00000018617 ENSMNEG00000044119 ##11 HLA-DQA1 (ENSMNEG00000038603) ##14 HLA-DQB1 (ENSMNEG00000027969) HLA-DOB (ENSMNEG00000043598) #15 TAP2 (ENSMNEG00000041413) #16 PSMB8 (ENSMNEG00000044942) TAP1 (ENSMNEG00000041518) #17 PSMB9 (ENSMNEG00000038721) #18 ENSMNEG00000036723 ENSMNEG00000035658 HLA-DMB (ENSMNEG00000044507) #19 HLA-DMA (ENSMNEG00000032904) #20 ENSMNEG00000039758 #21 BRD2 (ENSMNEG00000030743) #22 HLA-DOA (ENSMNEG00000008508) #23 HLA-DPA1 (ENSMNEG00000040889) HLA-DPB1 (ENSMNEG00000029725) ENSMNEG00000010287 COL11A2 (ENSMNEG00000022236) #28 RXRB (ENSMNEG00000034252) #24 SLC39A7 (ENSMNEG00000034647) #26 HSD17B8 (ENSMNEG00000036244) #25 RING1 (ENSMNEG00000042339) #27 VPS52 (ENSMNEG00000038741) ENSMNEG00000045500 ##29 WDR46 (ENSMNEG00000034609) #31 PFDN6 (ENSMNEG00000030272) #32 RGL2 (ENSMNEG00000039053) #33 ENSMNEG00000013214 Cercopithecinae_b ANCESTRAL SPECIES 18 ENSGT00530000064866 ENSGT00940000153251.b.a ENSGT00390000015391 ENSGT00940000155046.t ENSGT00940000162892.a.a.b ##14 ENSGT00940000154723.b.m.a ENSGT00940000162353.h #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.n ENSGT00940000162498.m ENSGT00940000162390 ENSGT00940000159762 #28 ENSGT00940000159208.B #24 ENSGT00940000160076 #26 ENSGT00940000160668 #25 ENSGT00940000161022 #27 ENSGT00390000008815 ENSGT00390000012691.c.b.n #29 ENSGT00940000161798 #30 ENSGT00390000007075 #31 ENSGT00390000010512 #32 ENSGT00940000161403 #33 Cercopithecinae_d ANCESTRAL SPECIES 197 ENSGT00940000162892.a.a.b ##14 ENSGT00940000154723.b.m.a ENSGT00940000162353.h #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.qc.b #22 ENSGT00940000162112 #23 ENSGT00940000162498.n ENSGT00940000162390 Drill MODERN SPECIES 1605 HLA-DOB (ENSMLEG00000044332) #15 TAP2 (ENSMLEG00000040111) #16 PSMB8 (ENSMLEG00000028732) TAP1 (ENSMLEG00000042023) #17 PSMB9 (ENSMLEG00000009919) #18 ENSMLEG00000033307 HLA-DMB (ENSMLEG00000032921) #19 HLA-DMA (ENSMLEG00000039758) #20 ENSMLEG00000035779 #21 ENSMLEG00000042296 #22 HLA-DOA (ENSMLEG00000037836) #23 ENSMLEG00000035946 Sooty mangabey MODERN SPECIES 451 HLA-DQA1 (ENSCATG00000012156) ##14 HLA-DQB1 (ENSCATG00000030073) ENSCATG00000036138 #15 TAP2 (ENSCATG00000038838) #16 PSMB8 (ENSCATG00000024878) TAP1 (ENSCATG00000033980) #17 PSMB9 (ENSCATG00000041856) #18 ENSCATG00000037243 HLA-DMB (ENSCATG00000024024) #19 HLA-DMA (ENSCATG00000030669) #20 ENSCATG00000037729 #21 ENSCATG00000034965 #22 HLA-DOA (ENSCATG00000035917) #23 ENSCATG00000024393 HLA-DPB1 (ENSCATG00000038170) Olive baboon MODERN SPECIES 16 CDSN (ENSPANG00000047914) PSORS1C2 (ENSPANG00000024487) ENSPANG00000049186 CCHCR1 (ENSPANG00000017010) TCF19 (ENSPANG00000024035) ENSPANG00000007627 ENSPANG00000044498 HLA-DOB (ENSPANG00000016388) #15 TAP2 (ENSPANG00000015103) #16 PSMB8 (ENSPANG00000016588) TAP1 (ENSPANG00000024178) #17 PSMB9 (ENSPANG00000033974) #18 HLA-DMB (ENSPANG00000019593) #19 HLA-DMA (ENSPANG00000026492) #20 ENSPANG00000035618 #21 BRD2 (ENSPANG00000019626) #22 HLA-DOA (ENSPANG00000031879) #23 HLA-DPA1 (ENSPANG00000018967) HLA-DPB1 (ENSPANG00000005764) COL11A2 (ENSPANG00000009194) #28 RXRB (ENSPANG00000018527) #24 SLC39A7 (ENSPANG00000023633) #26 HSD17B8 (ENSPANG00000023634) #25 RING1 (ENSPANG00000023635) #27 VPS52 (ENSPANG00000026491) RPS18 (ENSPANG00000029306) #29 B3GALT4 (ENSPANG00000040674) #30 WDR46 (ENSPANG00000009193) #31 PFDN6 (ENSPANG00000025458) #32 RGL2 (ENSPANG00000023572) #33 TAPBP (ENSPANG00000022348) #34 Vervet Monkey MODERN SPECIES 8 AGER (ENSCSAG00000009312) PBX2 (ENSCSAG00000009322) GPSM3 (ENSCSAG00000009326) NOTCH4 (ENSCSAG00000009351) #7 HLA-DRA (ENSCSAG00000009368) #10 ENSCSAG00000009375 HLA-DRB1 (ENSCSAG00000009383) ##11 HLA-DQA1 (ENSCSAG00000009389) #14 HLA-DQB1 (ENSCSAG00000009394) HLA-DOB (ENSCSAG00000009402) #15 PSMB8 (ENSCSAG00000009409) TAP1 (ENSCSAG00000009417) #17 PSMB9 (ENSCSAG00000009427) #18 HLA-DMB (ENSCSAG00000009430) #19 HLA-DMA (ENSCSAG00000009436) #20 BRD2 (ENSCSAG00000009445) #22 HLA-DOA (ENSCSAG00000009452) #23 ENSCSAG00000009455 ENSCSAG00000009461 COL11A2 (ENSCSAG00000009488) #28 RXRB (ENSCSAG00000009510) #24 SLC39A7 (ENSCSAG00000009519) #26 HSD17B8 (ENSCSAG00000009530) #25 RING1 (ENSCSAG00000009538) #27 VPS52 (ENSCSAG00000009546) B3GALT4 (ENSCSAG00000019308) #30 WDR46 (ENSCSAG00000009552) #31 PFDN6 (ENSCSAG00000009556) #32 RGL2 (ENSCSAG00000009562) #33 TAPBP (ENSCSAG00000009568) #34 ZBTB22 (ENSCSAG00000019307) #35 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a ##22 Cercopithecinae_d DUPLICATION Cercopithecinae_d ANCESTRAL SPECIES 68 ENSGT00390000004799 ENSGT00390000018900 ENSGT00940000153165.a.b.a ENSGT00940000164696 ENSGT00940000164691.a.b ENSGT00940000164793 ENSGT00940000154251.A.b.a.b.a ENSGT00950000183206.b.c.a.b.a.a ENSGT00940000161967 ENSGT00940000162415 ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000158134.A ENSGT00940000162666 ENSGT00940000162246 ENSGT01090000259995.b.b.b ENSGT00940000153385.b.a.b.qc.a.a ##22 ENSGT01090000259995.b.b.a.b.o ENSGT01090000259995.b.b.a.a.b.o.a.b ENSGT01090000259995.b.b.a.a.b.p.a Drill MODERN SPECIES 279 TRIM58 (ENSMLEG00000030196) OR2AJ1 (ENSMLEG00000005755) ENSMLEG00000031562 ##22 ENSMLEG00000011380 ENSMLEG00000037918 ENSMLEG00000027254 Sooty mangabey MODERN SPECIES 301 ENSCATG00000030246 ZNF124 (ENSCATG00000035310) ENSCATG00000038074 ENSCATG00000005868 ZNF496 (ENSCATG00000031929) NLRP3 (ENSCATG00000029371) OR2B11 (ENSCATG00000043410) GCSAML (ENSCATG00000030752) OR13G1 (ENSCATG00000043354) TRIM58 (ENSCATG00000038759) ENSCATG00000030481 ENSCATG00000039502 ##22 ENSCATG00000034652 ENSCATG00000017262 ENSCATG00000015507 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.qc.a.b ##22 Sooty mangabey MODERN SPECIES 333 SMTNL1 (ENSCATG00000009203) TIMM10 (ENSCATG00000030369) SLC43A1 (ENSCATG00000036597) RTN4RL2 (ENSCATG00000029746) SLC43A3 (ENSCATG00000031268) PRG2 (ENSCATG00000039658) PRG3 (ENSCATG00000011827) P2RX3 (ENSCATG00000028693) SSRP1 (ENSCATG00000041377) TNKS1BP1 (ENSCATG00000037546) APLNR (ENSCATG00000019437) LRRC55 (ENSCATG00000010960) ENSCATG00000013388 OR9G4 (ENSCATG00000019474) ENSCATG00000019867 ENSCATG00000031014 ##22 OR5M9 (ENSCATG00000020470) OR8J1 (ENSCATG00000014575) OR8K1 (ENSCATG00000018484) ENSCATG00000029525 ENSCATG00000018722 OR5I1 (ENSCATG00000016816) OR4S2 (ENSCATG00000018258) ENSCATG00000039191 OR4A8 (ENSCATG00000000891) Cercopithecinae ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.pc ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.pc ##22 Macaca ANCESTRAL SPECIES ENSGT00940000153385.b.a.b.pc ##22 Macaca_a ANCESTRAL SPECIES 1 ENSGT00940000157246 ENSGT01030000234542.b.b.a.a.a.b.u ENSGT01060000248581.A.b.l ENSGT00940000164421.c ENSGT01100000263561.C.d.a.a ENSGT01100000263561.C.d.a.b.a ENSGT00940000164421.d ENSGT01060000248581.A.b.k ENSGT00940000154646.C.n.a ENSGT00940000161507 ENSGT00940000158718 ENSGT00940000161423 ENSGT00940000159979 ENSGT00530000063777.a.a.a ENSGT00530000063777.a.a.b ENSGT00940000153385.b.a.b.pc ##22 ENSGT00940000162790.a ENSGT00940000162086 ENSGT00940000160234 ENSGT00940000158035 ENSGT01030000234635.a.a.a.b ENSGT00940000162852.a ENSGT00940000162117 ENSGT00390000003207.a ENSGT00940000159972 ENSGT00940000162084 ENSGT00940000153523.j ENSGT00950000183216.d ENSGT00940000153523.i.b ENSGT00940000162597 ENSGT00940000163161 Crab-eating macaque MODERN SPECIES 10 RAB8A (ENSMFAG00000035674) ENSMFAG00000042469 ENSMFAG00000018623 CYP4F11 (ENSMFAG00000039188) OR10H5 (ENSMFAG00000054868) ENSMFAG00000054713 CYP4F57 (ENSMFAG00000045394) ENSMFAG00000052137 ENSMFAG00000053879 CYP4F22 (ENSMFAG00000043198) PGLYRP2 (ENSMFAG00000024296) WIZ (ENSMFAG00000039361) ENSMFAG00000051652 AKAP8L (ENSMFAG00000045237) AKAP8 (ENSMFAG00000042432) ENSMFAG00000030806 ##22 EPHX3 (ENSMFAG00000001020) ILVBL (ENSMFAG00000030909) SYDE1 (ENSMFAG00000037133) OR1I1 (ENSMFAG00000049100) CASP14 (ENSMFAG00000045231) CCDC105 (ENSMFAG00000039156) SLC1A6 (ENSMFAG00000003076) OR7C2 (ENSMFAG00000034243) ENSMFAG00000057232 ENSMFAG00000047405 ENSMFAG00000058125 ZNF333 (ENSMFAG00000035483) ADGRE2 (ENSMFAG00000038126) CLEC17A (ENSMFAG00000043558) NDUFB7 (ENSMFAG00000043529) Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 177 ENSGT00940000154993.m.a.a ##11 ENSGT00940000154993.m.b ##11 ENSGT00940000154993.m.a.b #12 ENSGT00940000162892.a.a.a #14 ENSGT00940000154723.b.m.b ENSGT00940000154723.b.n ENSGT00940000162353 #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.a.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b.nc #22 ENSGT00940000162112 #23 Golden snub-nosed monkey MODERN SPECIES 1416 TAP2 (ENSRROG00000033497) #16 PSMB8 (ENSRROG00000019326) TAP1 (ENSRROG00000021353) #17 PSMB9 (ENSRROG00000005028) #18 ENSRROG00000012955 HLA-DMB (ENSRROG00000039771) #19 HLA-DMA (ENSRROG00000037828) #20 ENSRROG00000034857 #21 ENSRROG00000012557 #22 HLA-DOA (ENSRROG00000000054) #23 Black snub-nosed monkey MODERN SPECIES 1396 HLA-DQA1 (ENSRBIG00000031838) #14 ENSRBIG00000031872 HLA-DOB (ENSRBIG00000039119) #15 TAP2 (ENSRBIG00000042752) #16 PSMB8 (ENSRBIG00000032621) TAP1 (ENSRBIG00000038729) #17 PSMB9 (ENSRBIG00000042419) #18 ENSRBIG00000031206 HLA-DMB (ENSRBIG00000031730) #19 HLA-DMA (ENSRBIG00000027897) #20 ENSRBIG00000033102 #21 ENSRBIG00000044329 #22 HLA-DOA (ENSRBIG00000041291) #23 Rhinopithecus ANCESTRAL SPECIES 229 ENSGT01010000222336.a.a.a.ob.a.a.o ENSGT00940000153052.c.b.a.a.a.a.a.a.b.b.b ENSGT00390000000083.a ENSGT00390000013207 ENSGT00940000153385.b.a.b.oc #22 ENSGT00940000156005 ENSGT00940000156891 ENSGT00940000158751 ENSGT00730000111019 ENSGT00390000016097 ENSGT00390000009546.a ENSGT00910000147388 ENSGT00860000135749 ENSGT00940000159153 ENSGT00940000157159 ENSGT00940000155944 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000157417 ENSGT00940000158243 ENSGT00940000161472 Black snub-nosed monkey MODERN SPECIES 713 ENSRBIG00000023969 ENSRBIG00000031681 RIOX1 (ENSRBIG00000017859) HEATR4 (ENSRBIG00000041847) ENSRBIG00000015372 #22 NUMB (ENSRBIG00000043156) PAPLN (ENSRBIG00000033248) PSEN1 (ENSRBIG00000019293) RBM25 (ENSRBIG00000039904) ZFYVE1 (ENSRBIG00000036107) DCAF4 (ENSRBIG00000041818) ENSRBIG00000040543 ENSRBIG00000038609 DPF3 (ENSRBIG00000021314) RGS6 (ENSRBIG00000038422) SIPA1L1 (ENSRBIG00000013622) ENSRBIG00000033864 PCNX1 (ENSRBIG00000027567) MAP3K9 (ENSRBIG00000031048) TTC9 (ENSRBIG00000041695) Golden snub-nosed monkey MODERN SPECIES 797 ENSRROG00000036776 ENSRROG00000039724 RIOX1 (ENSRROG00000010218) HEATR4 (ENSRROG00000040469) ENSRROG00000035725 #22 NUMB (ENSRROG00000039499) PAPLN (ENSRROG00000032324) PSEN1 (ENSRROG00000023023) RBM25 (ENSRROG00000035556) ENSRROG00000028901 ZFYVE1 (ENSRROG00000037742) DCAF4 (ENSRROG00000035960) ENSRROG00000044529 ENSRROG00000045287 DPF3 (ENSRROG00000039384) RGS6 (ENSRROG00000040751) Hominoidea ANCESTRAL SPECIES 4 ENSGT00940000154993.m.b ##11 ENSGT00940000154993.m.a.b #12 ENSGT00940000162892.a.a #14 ENSGT00940000154723.b.m.a ENSGT00940000162892.a.b ##14 ENSGT00940000154723.b.n ENSGT00940000162353 #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.b.a.a.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 ENSGT00940000162390 ENSGT00940000159762 #28 ENSGT00940000159208.B #24 ENSGT00940000160076 #26 ENSGT00940000160668 #25 ENSGT00940000161022 #27 ENSGT00390000008815 ENSGT00390000012691.c.b.m.a ##29 ENSGT00940000161798 #30 ENSGT00390000007075 #31 ENSGT00390000010512 #32 ENSGT00940000161403 #33 ENSGT00940000159200 #34 Hominidae ANCESTRAL SPECIES 5 ENSGT00940000160997 #10 ENSGT00940000154993.m.a.a ##11 ENSGT00940000162892.a.a #14 ENSGT00940000154723.b.m.a ENSGT00940000162892.a.b ##14 ENSGT00940000154723.b.n ENSGT00940000162353 #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.b.a.a.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 ENSGT00940000162390 ENSGT00940000159762 #28 ENSGT00940000159208.B #24 ENSGT00940000160076 #26 ENSGT00940000160668 #25 ENSGT00940000161022 #27 ENSGT00390000008815 ENSGT00390000012691.c.b.m.a ##29 ENSGT00390000012691.c.b.n #29 ENSGT00940000161798 #30 ENSGT00390000007075 #31 ENSGT00390000010512 #32 ENSGT00940000161403 #33 Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00940000154993.m.a.b #12 ENSGT00940000154993.m.a.a ##11 ENSGT00940000162892.a.a #14 ENSGT00940000154723.b.m.a ENSGT00940000162892.a.b ##14 ENSGT00940000154723.b.n ENSGT00940000162353 #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.b.a.a.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 ENSGT00940000162390 ENSGT00940000159762 #28 ENSGT00940000159208.B #24 ENSGT00940000160076 #26 ENSGT00940000160668 #25 ENSGT00940000161022 #27 ENSGT00390000008815 ENSGT00390000012691.c.b.m.a ##29 ENSGT00390000012691.c.b.n #29 ENSGT00940000161798 #30 ENSGT00390000007075 #31 ENSGT00390000010512 #32 ENSGT00940000161403 #33 Gorilla MODERN SPECIES 19 BTNL2 (ENSGGOG00000009855) HLA-DRA (ENSGGOG00000009861) #10 HLA-DRB5 (ENSGGOG00000037929) #12 ENSGGOG00000000700 ##11 HLA-DQA1 (ENSGGOG00000013538) #14 HLA-DQB1 (ENSGGOG00000004252) ENSGGOG00000037744 ##14 HLA-DQB2 (ENSGGOG00000014413) HLA-DOB (ENSGGOG00000043194) #15 TAP2 (ENSGGOG00000010941) #16 PSMB8 (ENSGGOG00000010953) TAP1 (ENSGGOG00000010958) #17 PSMB9 (ENSGGOG00000010965) #18 HLA-DMB (ENSGGOG00000022404) #19 ENSGGOG00000005835 #20 BRD2 (ENSGGOG00000043461) #22 ENSGGOG00000005838 #21 HLA-DOA (ENSGGOG00000010653) #23 HLA-DPA1 (ENSGGOG00000013625) HLA-DPB1 (ENSGGOG00000013630) COL11A2 (ENSGGOG00000009799) #28 RXRB (ENSGGOG00000009823) #24 SLC39A7 (ENSGGOG00000009830) #26 HSD17B8 (ENSGGOG00000009838) #25 RING1 (ENSGGOG00000009842) #27 VPS52 (ENSGGOG00000006565) RPS18 (ENSGGOG00000006571) ##29 WDR46 (ENSGGOG00000006578) #31 PFDN6 (ENSGGOG00000006583) #32 RGL2 (ENSGGOG00000006585) #33 TAPBP (ENSGGOG00000006593) #34 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00940000154993.m.a.b #12 ENSGT00940000154993.m.a.a ##11 ENSGT00940000162892.a.a #14 ENSGT00940000154723.b.m.a ENSGT00940000162892.a.b ##14 ENSGT00940000154723.b.n ENSGT00940000162353 #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.b.a.a.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 ENSGT00940000162390 ENSGT00940000159762 #28 ENSGT00940000159208.B #24 ENSGT00940000160076 #26 ENSGT00940000160668 #25 ENSGT00940000161022 #27 ENSGT00390000008815 ENSGT00390000012691.c.b.m.a ##29 ENSGT00390000012691.c.b.n #29 ENSGT00940000161798 #30 ENSGT00390000007075 #31 ENSGT00390000010512 #32 ENSGT00940000161403 #33 Pan ANCESTRAL SPECIES 5 ENSGT00940000154993.m.b ##11 ENSGT00940000154993.m.a.b #12 ENSGT00940000162892.a.a #14 ENSGT00940000154723.b.m.a ENSGT00940000162892.a.b ##14 ENSGT00940000154723.b.n ENSGT00940000162353 #15 ENSGT00940000160499 #16 ENSGT00940000157293 ENSGT00940000159023 #17 ENSGT00940000159897 #18 ENSGT00390000004757.`b.b.a.a.a ENSGT00940000160381 #19 ENSGT00940000161157 #20 ENSGT00860000136081 #21 ENSGT00940000153385.b.a.b #22 ENSGT00940000162112 #23 ENSGT00940000162498 ENSGT00940000162390 ENSGT00940000159762 #28 ENSGT00940000159208.B #24 ENSGT00940000160076 #26 ENSGT00940000160668 #25 ENSGT00940000161022 #27 ENSGT00390000008815 ENSGT00390000012691.c.b.m.a ##29 ENSGT00940000161798 #30 ENSGT00390000007075 #31 ENSGT00390000010512 #32 ENSGT00940000161403 #33 ENSGT00940000159200 #34 Chimpanzee MODERN SPECIES 19 PATR-DRA (ENSPTRG00000018016) #10 PATR-DRB5 (ENSPTRG00000023735) #12 ENSPTRG00000051243 ##11 PATR-DQB1 (ENSPTRG00000018001) ##11 HLA-DQA1 (ENSPTRG00000018017) #14 HLA-DQB1 (ENSPTRG00000018018) HLA-DQA2 (ENSPTRG00000034186) ##14 HLA-DQB2 (ENSPTRG00000023404) PATR-DOB (ENSPTRG00000018020) #15 TAP2 (ENSPTRG00000018021) #16 PSMB8 (ENSPTRG00000018022) TAP1 (ENSPTRG00000018023) #17 PSMB9 (ENSPTRG00000018024) #18 PATR-DMB (ENSPTRG00000018025) #19 ENSPTRG00000018026 #20 BRD2 (ENSPTRG00000042676) #22 ENSPTRG00000018027 #21 HLA-DOA (ENSPTRG00000018028) #23 HLA-DPA1 (ENSPTRG00000018029) HLA-DPB1 (ENSPTRG00000018030) COL11A2 (ENSPTRG00000018033) #28 RXRB (ENSPTRG00000018034) #24 SLC39A7 (ENSPTRG00000018035) #26 HSD17B8 (ENSPTRG00000018036) #25 RING1 (ENSPTRG00000018037) #27 VPS52 (ENSPTRG00000018038) RPS18 (ENSPTRG00000018039) ##29 WDR46 (ENSPTRG00000018040) #31 PFDN6 (ENSPTRG00000018041) #32 RGL2 (ENSPTRG00000018042) #33 TAPBP (ENSPTRG00000018043) #34 Bonobo MODERN SPECIES 19 ENSPPAG00000036652 ##11 ENSPPAG00000039594 #12 ENSPPAG00000019881 #14 HLA-DQB1 (ENSPPAG00000041275) HLA-DQA2 (ENSPPAG00000038014) ##14 HLA-DQB2 (ENSPPAG00000041341) HLA-DOB (ENSPPAG00000027428) #15 TAP2 (ENSPPAG00000033938) #16 PSMB8 (ENSPPAG00000042377) TAP1 (ENSPPAG00000029436) #17 PSMB9 (ENSPPAG00000038623) #18 ENSPPAG00000033020 HLA-DMB (ENSPPAG00000037856) #19 HLA-DMA (ENSPPAG00000041639) #20 ENSPPAG00000027710 #21 BRD2 (ENSPPAG00000016843) #22 HLA-DOA (ENSPPAG00000036361) #23 HLA-DPA1 (ENSPPAG00000031863) HLA-DPB1 (ENSPPAG00000041449) COL11A2 (ENSPPAG00000013099) #28 RXRB (ENSPPAG00000038590) #24 SLC39A7 (ENSPPAG00000028225) #26 HSD17B8 (ENSPPAG00000032286) #25 RING1 (ENSPPAG00000001290) #27 VPS52 (ENSPPAG00000039628) RPS18 (ENSPPAG00000037432) ##29 B3GALT4 (ENSPPAG00000040442) #30 WDR46 (ENSPPAG00000029606) #31 PFDN6 (ENSPPAG00000026096) #32 RGL2 (ENSPPAG00000030717) #33 TAPBP (ENSPPAG00000024524) #34 Human MODERN SPECIES 18 HLA-DRB5 (ENSG00000198502) #12 HLA-DRB1 (ENSG00000196126) ##11 HLA-DQA1 (ENSG00000196735) #14 HLA-DQB1 (ENSG00000179344) HLA-DQA2 (ENSG00000237541) ##14 HLA-DQB2 (ENSG00000232629) HLA-DOB (ENSG00000241106) #15 ENSG00000250264 TAP2 (ENSG00000204267) #16 PSMB8 (ENSG00000204264) PSMB9 (ENSG00000240065) #18 TAP1 (ENSG00000168394) #17 HLA-DMB (ENSG00000242574) #19 ENSG00000248993 HLA-DMA (ENSG00000204257) #20 BRD2 (ENSG00000204256) #22 HLA-DOA (ENSG00000204252) #23 HLA-DPA1 (ENSG00000231389) HLA-DPB1 (ENSG00000223865) COL11A2 (ENSG00000204248) #28 RXRB (ENSG00000204231) #24 SLC39A7 (ENSG00000112473) #26 HSD17B8 (ENSG00000204228) #25 RING1 (ENSG00000204227) #27 VPS52 (ENSG00000223501) RPS18 (ENSG00000231500) #29 B3GALT4 (ENSG00000235863) #30 WDR46 (ENSG00000227057) #31 PFDN6 (ENSG00000204220) #32 RGL2 (ENSG00000237441) #33 TAPBP (ENSG00000231925) #34 Orangutan MODERN SPECIES 19 TSBP1 (ENSPPYG00000016489) #9 BTNL2 (ENSPPYG00000017215) HLA-DRA (ENSPPYG00000017234) #10 HLA-DRB1 (ENSPPYG00000016490) ##11 ENSPPYG00000017216 ##11 HLA-DQA2 (ENSPPYG00000017219) ##14 HLA-DQB2 (ENSPPYG00000017220) HLA-DOB (ENSPPYG00000017221) #15 TAP2 (ENSPPYG00000017222) #16 PSMB8 (ENSPPYG00000017223) TAP1 (ENSPPYG00000017224) #17 PSMB9 (ENSPPYG00000017225) #18 HLA-DMB (ENSPPYG00000017226) #19 ENSPPYG00000017227 #20 ENSPPYG00000031820 #21 BRD2 (ENSPPYG00000017228) #22 HLA-DOA (ENSPPYG00000016495) #23 ENSPPYG00000029571 HLA-DPA1 (ENSPPYG00000017229) COL11A2 (ENSPPYG00000017238) #28 RXRB (ENSPPYG00000017239) #24 SLC39A7 (ENSPPYG00000017240) #26 HSD17B8 (ENSPPYG00000017241) #25 RING1 (ENSPPYG00000017242) #27 VPS52 (ENSPPYG00000017243) ENSPPYG00000025953 ##29 B3GALT4 (ENSPPYG00000017244) #30 WDR46 (ENSPPYG00000017245) #31 PFDN6 (ENSPPYG00000038269) #32 RGL2 (ENSPPYG00000017247) #33 TAPBP (ENSPPYG00000017248) #34 Gibbon MODERN SPECIES 10 HLA-DRA (ENSNLEG00000006686) #10 ENSNLEG00000032832 ##11 HLA-DQA1 (ENSNLEG00000032515) #14 HLA-DQB1 (ENSNLEG00000006693) HLA-DQA2 (ENSNLEG00000027015) ##14 HLA-DQB2 (ENSNLEG00000006713) HLA-DOB (ENSNLEG00000027543) #15 TAP2 (ENSNLEG00000006714) #16 PSMB8 (ENSNLEG00000006733) TAP1 (ENSNLEG00000006738) #17 PSMB9 (ENSNLEG00000006757) #18 ENSNLEG00000032895 HLA-DMB (ENSNLEG00000006770) #19 HLA-DMA (ENSNLEG00000006775) #20 ENSNLEG00000032110 #21 BRD2 (ENSNLEG00000006782) #22 ENSNLEG00000031675 #23 HLA-DPA1 (ENSNLEG00000034417) HLA-DPB1 (ENSNLEG00000006801) ENSNLEG00000030023 #28 RXRB (ENSNLEG00000006809) #24 SLC39A7 (ENSNLEG00000006815) #26 HSD17B8 (ENSNLEG00000006824) #25 RING1 (ENSNLEG00000006830) #27 VPS52 (ENSNLEG00000006832) RPS18 (ENSNLEG00000006840) ##29 B3GALT4 (ENSNLEG00000006841) #30 ENSNLEG00000006842 #31 PFDN6 (ENSNLEG00000034338) #32 RGL2 (ENSNLEG00000006847) #33 ENSNLEG00000006852 #34