Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00940000154993.m.a.b ##9	ENSGT00940000162892.a.a.a ##10	ENSGT00940000154723.b.m.b ##11	ENSGT00940000154993.m.a.a.a #9	ENSGT00940000162892.a.a.b #10	ENSGT00940000154723.b.m.a #11	ENSGT00940000162353 #12	ENSGT00940000160499 #13	ENSGT00940000157293 #14	ENSGT00940000159023 #15	ENSGT00940000159897 #16	ENSGT00390000004757.`b.a #18	ENSGT00940000160381 #19	ENSGT00940000161157 #20	ENSGT00860000136081 #21	ENSGT00940000153385.b.a.b.qc.b #22	ENSGT00940000162112 #23	ENSGT00940000162498 #24	ENSGT00940000162390 #26	ENSGT00940000159762 #27	ENSGT00940000159208.B #28	ENSGT00940000160076 #29	ENSGT00940000160668 #30	ENSGT00940000161022 #31	ENSGT00390000008815 #32	ENSGT00390000012691.c.b.n ##33	ENSGT00940000161798	ENSGT00390000007075 #34	ENSGT00390000010512 #35	ENSGT00940000161403 #36	ENSGT00910000147736 #37
Macaca	ANCESTRAL SPECIES	9	ENSGT00530000064839	ENSGT00940000160997	ENSGT00940000154993.m.a.a.b.b ##9	ENSGT00940000154993.m.b.a.b ##9	ENSGT00940000154993.m.a.a.a #9	ENSGT00940000162892.a.a.b #10	ENSGT00940000154723.b.m.a #11	ENSGT00940000162353 #12	ENSGT00940000160499 #13	ENSGT00940000157293 #14	ENSGT00940000159023 #15	ENSGT00940000159897 #16	ENSGT00940000160381 #19	ENSGT00940000161157 #20	ENSGT00860000136081 #21	ENSGT00940000153385.b.a.b.qc.b #22	ENSGT00940000162112 #23	ENSGT00940000162498.k #24	ENSGT00940000162390 #26	ENSGT00940000159762 #27	ENSGT00940000159208.B #28	ENSGT00940000160076 #29	ENSGT00940000160668 #30	ENSGT00940000161022 #31	ENSGT00390000008815 #32	ENSGT00390000012691.c.b.m.b #33	ENSGT00940000161798	ENSGT00390000007075 #34	ENSGT00390000010512 #35	ENSGT00940000161403 #36	ENSGT00910000147736 #37
Pig-tailed macaque	MODERN SPECIES	528	ENSMNEG00000020869 #7	ENSMNEG00000018617 #8	ENSMNEG00000044119 #9	HLA-DQA1 (ENSMNEG00000038603) #10	HLA-DQB1 (ENSMNEG00000027969) #11	HLA-DOB (ENSMNEG00000043598) #12	TAP2 (ENSMNEG00000041413) #13	PSMB8 (ENSMNEG00000044942) #14	TAP1 (ENSMNEG00000041518) #15	PSMB9 (ENSMNEG00000038721) #16	ENSMNEG00000036723 #17	ENSMNEG00000035658 #18	HLA-DMB (ENSMNEG00000044507) #19	HLA-DMA (ENSMNEG00000032904) #20	ENSMNEG00000039758 #21	BRD2 (ENSMNEG00000030743) #22	HLA-DOA (ENSMNEG00000008508) #23	HLA-DPA1 (ENSMNEG00000040889) #24	HLA-DPB1 (ENSMNEG00000029725) #25	ENSMNEG00000010287 #26	COL11A2 (ENSMNEG00000022236) #27	RXRB (ENSMNEG00000034252) #28	SLC39A7 (ENSMNEG00000034647) #29	HSD17B8 (ENSMNEG00000036244) #30	RING1 (ENSMNEG00000042339) #31	VPS52 (ENSMNEG00000038741) #32	ENSMNEG00000045500 #33	WDR46 (ENSMNEG00000034609) #34	PFDN6 (ENSMNEG00000030272) #35	RGL2 (ENSMNEG00000039053) #36	ENSMNEG00000013214 #37
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00890000139566	ENSGT00940000160293	ENSGT00390000002471	ENSGT00940000163287	ENSGT00950000183123.h.b	ENSGT00530000064839	ENSGT00940000160997	ENSGT00940000154993.m.a.b ##9	ENSGT00940000162353 #12	ENSGT00940000160499 #13	ENSGT00940000159023 #15	ENSGT00940000159897 #16	ENSGT00940000160381 #19	ENSGT00940000161157 #20	ENSGT00860000136081 #21	ENSGT00940000153385.b.a.b.qc.b #22	ENSGT00940000162112 #23	ENSGT00940000162498.k #24	ENSGT00940000159762 #27	ENSGT00940000159208.B #28	ENSGT00940000160668 #30	ENSGT00940000160076 #29	ENSGT00940000161022 #31	ENSGT00390000008815 #32	ENSGT00390000012691.c.b.m.b #33	ENSGT00940000161798	ENSGT00390000007075 #34	ENSGT00390000010512 #35	ENSGT00940000161403 #36	ENSGT00940000159200	ENSGT00940000160991
Crab-eating macaque	MODERN SPECIES	14	ENSMFAG00000033054	ENSMFAG00000049929	ENSMFAG00000033140	HLA-DRA (ENSMFAG00000032157)	ENSMFAG00000058962 #7	HLA-DRB5 (ENSMFAG00000000676) ##9	ENSMFAG00000054107	HLA-DQA1 (ENSMFAG00000002949) ##10	HLA-DOB (ENSMFAG00000003652) #12	TAP2 (ENSMFAG00000037139) #13	TAP1 (ENSMFAG00000041369) #15	PSMB9 (ENSMFAG00000038128) #16	HLA-DMB (ENSMFAG00000004018) #19	HLA-DMA (ENSMFAG00000042109) #20	ENSMFAG00000060572 #21	BRD2 (ENSMFAG00000037520) #22	HLA-DOA (ENSMFAG00000058905) #23	RXRB (ENSMFAG00000003583) #28	HSD17B8 (ENSMFAG00000037332) #30	SLC39A7 (ENSMFAG00000038848) #29	RING1 (ENSMFAG00000002610) #31	COL11A2 (ENSMFAG00000017491) #27	RPS18 (ENSMFAG00000032199) ##33	B3GALT4 (ENSMFAG00000041942)	WDR46 (ENSMFAG00000000475) #34	PFDN6 (ENSMFAG00000041216) #35	RGL2 (ENSMFAG00000039597) #36	TAPBP (ENSMFAG00000000942)	ZBTB22 (ENSMFAG00000011344)	DAXX (ENSMFAG00000038728)	ENSMFAG00000058856
Rhesus	MODERN SPECIES	14	RNF5 (ENSMMUG00000018438)	AGER (ENSMMUG00000018442)	PBX2 (ENSMMUG00000018456)	GPSM3 (ENSMMUG00000018459)	NOTCH4 (ENSMMUG00000018461)	ENSMMUG00000029402	TSBP1 (ENSMMUG00000018425)	MAMU-DRA (ENSMMUG00000039082)	MAMU-DRB1 (ENSMMUG00000029799) ##9	ENSMMUG00000054826	MAMU-DOB (ENSMMUG00000011293) #13	PSMB8 (ENSMMUG00000011301) #15	PSMB9 (ENSMMUG00000011304) #16	ENSMMUG00000063291 #17	MAMU-DMB (ENSMMUG00000022626) #19	BRD2 (ENSMMUG00000023138) #22	MAMU-DOA (ENSMMUG00000015734) #23	ENSMMUG00000041095	ENSMMUG00000019371 #24	COL11A2 (ENSMMUG00000003850) #27	RXRB (ENSMMUG00000003858) #28	HSD17B8 (ENSMMUG00000003861) #30	SLC39A7 (ENSMMUG00000003859) #29	RING1 (ENSMMUG00000003863) #31	ENSMMUG00000003867 #33	VPS52 (ENSMMUG00000003864) #32	B3GALT4 (ENSMMUG00000064507)	WDR46 (ENSMMUG00000003869) #34	PFDN6 (ENSMMUG00000003871) #35	RGL2 (ENSMMUG00000003872) #36	TAPBP (ENSMMUG00000003875)
Cercopithecinae_b	ANCESTRAL SPECIES	18	ENSGT00530000064866	ENSGT00940000153251.b.a	ENSGT00390000015391	ENSGT00940000155046.t	ENSGT00940000162892.a.a.b #10	ENSGT00940000154723.b.m.a #11	ENSGT00940000162353.h #12	ENSGT00940000160499 #13	ENSGT00940000157293 #14	ENSGT00940000159023 #15	ENSGT00940000159897 #16	ENSGT00390000004757.`b.a #18	ENSGT00940000160381 #19	ENSGT00940000161157 #20	ENSGT00860000136081 #21	ENSGT00940000153385.b.a.b.qc.b #22	ENSGT00940000162112 #23	ENSGT00940000162498.n #24	ENSGT00940000162498.m #24	ENSGT00940000162390 #26	ENSGT00940000159762 #27	ENSGT00940000159208.B #28	ENSGT00940000160076 #29	ENSGT00940000160668 #30	ENSGT00940000161022 #31	ENSGT00390000008815 #32	ENSGT00390000012691.c.b.n ##33	ENSGT00940000161798	ENSGT00390000007075 #34	ENSGT00390000010512 #35	ENSGT00940000161403 #36
Cercopithecinae_d	ANCESTRAL SPECIES	197					ENSGT00940000162892.a.a.b #10	ENSGT00940000154723.b.m.a #11	ENSGT00940000162353.h #12	ENSGT00940000160499 #13	ENSGT00940000157293 #14	ENSGT00940000159023 #15	ENSGT00940000159897 #16	ENSGT00390000004757.`b.a #18	ENSGT00940000160381 #19	ENSGT00940000161157 #20	ENSGT00860000136081 #21	ENSGT00940000153385.b.a.b.qc.b #22	ENSGT00940000162112 #23	ENSGT00940000162498.n #24	ENSGT00940000162390 #26
Drill	MODERN SPECIES	1605							HLA-DOB (ENSMLEG00000044332) #12	TAP2 (ENSMLEG00000040111) #13	PSMB8 (ENSMLEG00000028732) #14	TAP1 (ENSMLEG00000042023) #15	PSMB9 (ENSMLEG00000009919) #16	ENSMLEG00000033307 #18	HLA-DMB (ENSMLEG00000032921) #19	HLA-DMA (ENSMLEG00000039758) #20	ENSMLEG00000035779 #21	ENSMLEG00000042296 #22	HLA-DOA (ENSMLEG00000037836) #23	ENSMLEG00000035946 #24
Sooty mangabey	MODERN SPECIES	451					HLA-DQA1 (ENSCATG00000012156) #10	HLA-DQB1 (ENSCATG00000030073) #11	ENSCATG00000036138 #12	TAP2 (ENSCATG00000038838) #13	PSMB8 (ENSCATG00000024878) #14	TAP1 (ENSCATG00000033980) #15	PSMB9 (ENSCATG00000041856) #16	ENSCATG00000037243 #18	HLA-DMB (ENSCATG00000024024) #19	HLA-DMA (ENSCATG00000030669) #20	ENSCATG00000037729 #21	ENSCATG00000034965 #22	HLA-DOA (ENSCATG00000035917) #23	ENSCATG00000024393 #24	HLA-DPB1 (ENSCATG00000038170) #26
Olive baboon	MODERN SPECIES	16	CDSN (ENSPANG00000047914)	PSORS1C2 (ENSPANG00000024487)	ENSPANG00000049186	CCHCR1 (ENSPANG00000017010)	TCF19 (ENSPANG00000024035)	ENSPANG00000007627	ENSPANG00000044498	HLA-DOB (ENSPANG00000016388) #12	TAP2 (ENSPANG00000015103) #13	PSMB8 (ENSPANG00000016588) #14	TAP1 (ENSPANG00000024178) #15	PSMB9 (ENSPANG00000033974) #16	HLA-DMB (ENSPANG00000019593) #19	HLA-DMA (ENSPANG00000026492) #20	ENSPANG00000035618 #21	BRD2 (ENSPANG00000019626) #22	HLA-DOA (ENSPANG00000031879) #23	HLA-DPA1 (ENSPANG00000018967) #24	HLA-DPB1 (ENSPANG00000005764) #26	COL11A2 (ENSPANG00000009194) #27	RXRB (ENSPANG00000018527) #28	SLC39A7 (ENSPANG00000023633) #29	HSD17B8 (ENSPANG00000023634) #30	RING1 (ENSPANG00000023635) #31	VPS52 (ENSPANG00000026491) #32	RPS18 (ENSPANG00000029306) ##33	B3GALT4 (ENSPANG00000040674)	WDR46 (ENSPANG00000009193) #34	PFDN6 (ENSPANG00000025458) #35	RGL2 (ENSPANG00000023572) #36	TAPBP (ENSPANG00000022348)