Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000154993.m.b #9	ENSGT00940000154993.m.a.b #8	ENSGT00940000162892.a.a #11	ENSGT00940000154723.b.m.a #12	ENSGT00940000162892.a.b #13	ENSGT00940000154723.b.n #14	ENSGT00940000162353 #15	ENSGT00940000160499 #16	ENSGT00940000157293 #17	ENSGT00940000159023 #18	ENSGT00940000159897 #19	ENSGT00390000004757.`b.b.a.a.a	ENSGT00940000160381 #20	ENSGT00940000161157 #21	ENSGT00860000136081 #23	ENSGT00940000153385.b.a.b #22	ENSGT00940000162112 #24	ENSGT00940000162498 #25	ENSGT00940000162390 #26	ENSGT00940000159762 #27	ENSGT00940000159208.B #28	ENSGT00940000160076 #29	ENSGT00940000160668 #30	ENSGT00940000161022 #31	ENSGT00390000008815 #32	ENSGT00390000012691.c.b.m.a #33	ENSGT00940000161798	ENSGT00390000007075 #34	ENSGT00390000010512 #35	ENSGT00940000161403 #36	ENSGT00940000159200 #37
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000160997 #7	ENSGT00940000154993.m.a.a #10	ENSGT00940000162892.a.a #11	ENSGT00940000154723.b.m.a #12	ENSGT00940000162892.a.b #13	ENSGT00940000154723.b.n #14	ENSGT00940000162353 #15	ENSGT00940000160499 #16	ENSGT00940000157293 #17	ENSGT00940000159023 #18	ENSGT00940000159897 #19	ENSGT00390000004757.`b.b.a.a.a	ENSGT00940000160381 #20	ENSGT00940000161157 #21	ENSGT00860000136081 #23	ENSGT00940000153385.b.a.b #22	ENSGT00940000162112 #24	ENSGT00940000162498 #25	ENSGT00940000162390 #26	ENSGT00940000159762 #27	ENSGT00940000159208.B #28	ENSGT00940000160076 #29	ENSGT00940000160668 #30	ENSGT00940000161022 #31	ENSGT00390000008815 #32	ENSGT00390000012691.c.b.m.a #33	ENSGT00390000012691.c.b.n ##33	ENSGT00940000161798	ENSGT00390000007075 #34	ENSGT00390000010512 #35	ENSGT00940000161403 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000154993.m.a.b #8	ENSGT00940000154993.m.a.a #10	ENSGT00940000162892.a.a #11	ENSGT00940000154723.b.m.a #12	ENSGT00940000162892.a.b #13	ENSGT00940000154723.b.n #14	ENSGT00940000162353 #15	ENSGT00940000160499 #16	ENSGT00940000157293 #17	ENSGT00940000159023 #18	ENSGT00940000159897 #19	ENSGT00390000004757.`b.b.a.a.a	ENSGT00940000160381 #20	ENSGT00940000161157 #21	ENSGT00860000136081 #23	ENSGT00940000153385.b.a.b #22	ENSGT00940000162112 #24	ENSGT00940000162498 #25	ENSGT00940000162390 #26	ENSGT00940000159762 #27	ENSGT00940000159208.B #28	ENSGT00940000160076 #29	ENSGT00940000160668 #30	ENSGT00940000161022 #31	ENSGT00390000008815 #32	ENSGT00390000012691.c.b.m.a #33	ENSGT00390000012691.c.b.n ##33	ENSGT00940000161798	ENSGT00390000007075 #34	ENSGT00390000010512 #35	ENSGT00940000161403 #36
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000154993.m.a.b #8	ENSGT00940000154993.m.a.a #10	ENSGT00940000162892.a.a #11	ENSGT00940000154723.b.m.a #12	ENSGT00940000162892.a.b #13	ENSGT00940000154723.b.n #14	ENSGT00940000162353 #15	ENSGT00940000160499 #16	ENSGT00940000157293 #17	ENSGT00940000159023 #18	ENSGT00940000159897 #19	ENSGT00390000004757.`b.b.a.a.a	ENSGT00940000160381 #20	ENSGT00940000161157 #21	ENSGT00860000136081 #23	ENSGT00940000153385.b.a.b #22	ENSGT00940000162112 #24	ENSGT00940000162498 #25	ENSGT00940000162390 #26	ENSGT00940000159762 #27	ENSGT00940000159208.B #28	ENSGT00940000160076 #29	ENSGT00940000160668 #30	ENSGT00940000161022 #31	ENSGT00390000008815 #32	ENSGT00390000012691.c.b.m.a #33	ENSGT00390000012691.c.b.n ##33	ENSGT00940000161798	ENSGT00390000007075 #34	ENSGT00390000010512 #35	ENSGT00940000161403 #36
Pan	ANCESTRAL SPECIES	5	ENSGT00940000154993.m.b #9	ENSGT00940000154993.m.a.b #8	ENSGT00940000162892.a.a #11	ENSGT00940000154723.b.m.a #12	ENSGT00940000162892.a.b #13	ENSGT00940000154723.b.n #14	ENSGT00940000162353 #15	ENSGT00940000160499 #16	ENSGT00940000157293 #17	ENSGT00940000159023 #18	ENSGT00940000159897 #19	ENSGT00390000004757.`b.b.a.a.a	ENSGT00940000160381 #20	ENSGT00940000161157 #21	ENSGT00860000136081 #23	ENSGT00940000153385.b.a.b #22	ENSGT00940000162112 #24	ENSGT00940000162498 #25	ENSGT00940000162390 #26	ENSGT00940000159762 #27	ENSGT00940000159208.B #28	ENSGT00940000160076 #29	ENSGT00940000160668 #30	ENSGT00940000161022 #31	ENSGT00390000008815 #32	ENSGT00390000012691.c.b.m.a #33	ENSGT00940000161798	ENSGT00390000007075 #34	ENSGT00390000010512 #35	ENSGT00940000161403 #36	ENSGT00940000159200 #37
Chimpanzee	MODERN SPECIES	19	PATR-DRA (ENSPTRG00000018016) #7	PATR-DRB5 (ENSPTRG00000023735) #8	ENSPTRG00000051243 #9	PATR-DQB1 (ENSPTRG00000018001) #10	HLA-DQA1 (ENSPTRG00000018017) #11	HLA-DQB1 (ENSPTRG00000018018) #12	HLA-DQA2 (ENSPTRG00000034186) #13	HLA-DQB2 (ENSPTRG00000023404) #14	PATR-DOB (ENSPTRG00000018020) #15	TAP2 (ENSPTRG00000018021) #16	PSMB8 (ENSPTRG00000018022) #17	TAP1 (ENSPTRG00000018023) #18	PSMB9 (ENSPTRG00000018024) #19	PATR-DMB (ENSPTRG00000018025) #20	ENSPTRG00000018026 #21	BRD2 (ENSPTRG00000042676) #22	ENSPTRG00000018027 #23	HLA-DOA (ENSPTRG00000018028) #24	HLA-DPA1 (ENSPTRG00000018029) #25	HLA-DPB1 (ENSPTRG00000018030) #26	COL11A2 (ENSPTRG00000018033) #27	RXRB (ENSPTRG00000018034) #28	SLC39A7 (ENSPTRG00000018035) #29	HSD17B8 (ENSPTRG00000018036) #30	RING1 (ENSPTRG00000018037) #31	VPS52 (ENSPTRG00000018038) #32	RPS18 (ENSPTRG00000018039) #33	WDR46 (ENSPTRG00000018040) #34	PFDN6 (ENSPTRG00000018041) #35	RGL2 (ENSPTRG00000018042) #36	TAPBP (ENSPTRG00000018043) #37
Bonobo	MODERN SPECIES	19	ENSPPAG00000036652 #9	ENSPPAG00000039594 #8	ENSPPAG00000019881 #11	HLA-DQB1 (ENSPPAG00000041275) #12	HLA-DQA2 (ENSPPAG00000038014) #13	HLA-DQB2 (ENSPPAG00000041341) #14	HLA-DOB (ENSPPAG00000027428) #15	TAP2 (ENSPPAG00000033938) #16	PSMB8 (ENSPPAG00000042377) #17	TAP1 (ENSPPAG00000029436) #18	PSMB9 (ENSPPAG00000038623) #19	ENSPPAG00000033020	HLA-DMB (ENSPPAG00000037856) #20	HLA-DMA (ENSPPAG00000041639) #21	ENSPPAG00000027710 #23	BRD2 (ENSPPAG00000016843) #22	HLA-DOA (ENSPPAG00000036361) #24	HLA-DPA1 (ENSPPAG00000031863) #25	HLA-DPB1 (ENSPPAG00000041449) #26	COL11A2 (ENSPPAG00000013099) #27	RXRB (ENSPPAG00000038590) #28	SLC39A7 (ENSPPAG00000028225) #29	HSD17B8 (ENSPPAG00000032286) #30	RING1 (ENSPPAG00000001290) #31	VPS52 (ENSPPAG00000039628) #32	RPS18 (ENSPPAG00000037432) #33	B3GALT4 (ENSPPAG00000040442)	WDR46 (ENSPPAG00000029606) #34	PFDN6 (ENSPPAG00000026096) #35	RGL2 (ENSPPAG00000030717) #36	TAPBP (ENSPPAG00000024524) #37
Human	MODERN SPECIES	18	HLA-DRB5 (ENSG00000198502) #8	HLA-DRB1 (ENSG00000196126) #10	HLA-DQA1 (ENSG00000196735) #11	HLA-DQB1 (ENSG00000179344) #12	HLA-DQA2 (ENSG00000237541) #13	HLA-DQB2 (ENSG00000232629) #14	HLA-DOB (ENSG00000241106) #15	ENSG00000250264	TAP2 (ENSG00000204267) #16	PSMB8 (ENSG00000204264) #17	PSMB9 (ENSG00000240065) #19	TAP1 (ENSG00000168394) #18	HLA-DMB (ENSG00000242574) #20	ENSG00000248993	HLA-DMA (ENSG00000204257) #21	BRD2 (ENSG00000204256) #22	HLA-DOA (ENSG00000204252) #24	HLA-DPA1 (ENSG00000231389) #25	HLA-DPB1 (ENSG00000223865) #26	COL11A2 (ENSG00000204248) #27	RXRB (ENSG00000204231) #28	SLC39A7 (ENSG00000112473) #29	HSD17B8 (ENSG00000204228) #30	RING1 (ENSG00000204227) #31	VPS52 (ENSG00000223501) #32	RPS18 (ENSG00000231500) ##33	B3GALT4 (ENSG00000235863)	WDR46 (ENSG00000227057) #34	PFDN6 (ENSG00000204220) #35	RGL2 (ENSG00000237441) #36	TAPBP (ENSG00000231925) #37
Gorilla	MODERN SPECIES	19	BTNL2 (ENSGGOG00000009855)	HLA-DRA (ENSGGOG00000009861) #7	HLA-DRB5 (ENSGGOG00000037929) #8	ENSGGOG00000000700 #9	HLA-DQA1 (ENSGGOG00000013538) #11	HLA-DQB1 (ENSGGOG00000004252) #12	ENSGGOG00000037744 #13	HLA-DQB2 (ENSGGOG00000014413) #14	HLA-DOB (ENSGGOG00000043194) #15	TAP2 (ENSGGOG00000010941) #16	PSMB8 (ENSGGOG00000010953) #17	TAP1 (ENSGGOG00000010958) #18	PSMB9 (ENSGGOG00000010965) #19	HLA-DMB (ENSGGOG00000022404) #20	ENSGGOG00000005835 #21	BRD2 (ENSGGOG00000043461) #22	ENSGGOG00000005838 #23	HLA-DOA (ENSGGOG00000010653) #24	HLA-DPA1 (ENSGGOG00000013625) #25	HLA-DPB1 (ENSGGOG00000013630) #26	COL11A2 (ENSGGOG00000009799) #27	RXRB (ENSGGOG00000009823) #28	SLC39A7 (ENSGGOG00000009830) #29	HSD17B8 (ENSGGOG00000009838) #30	RING1 (ENSGGOG00000009842) #31	VPS52 (ENSGGOG00000006565) #32	RPS18 (ENSGGOG00000006571) #33	WDR46 (ENSGGOG00000006578) #34	PFDN6 (ENSGGOG00000006583) #35	RGL2 (ENSGGOG00000006585) #36	TAPBP (ENSGGOG00000006593) #37
Orangutan	MODERN SPECIES	19	TSBP1 (ENSPPYG00000016489)	BTNL2 (ENSPPYG00000017215)	HLA-DRA (ENSPPYG00000017234) #7	HLA-DRB1 (ENSPPYG00000016490) #10	ENSPPYG00000017216 #9	HLA-DQA2 (ENSPPYG00000017219) #13	HLA-DQB2 (ENSPPYG00000017220) #14	HLA-DOB (ENSPPYG00000017221) #15	TAP2 (ENSPPYG00000017222) #16	PSMB8 (ENSPPYG00000017223) #17	TAP1 (ENSPPYG00000017224) #18	PSMB9 (ENSPPYG00000017225) #19	HLA-DMB (ENSPPYG00000017226) #20	ENSPPYG00000017227 #21	ENSPPYG00000031820 #23	BRD2 (ENSPPYG00000017228) #22	HLA-DOA (ENSPPYG00000016495) #24	ENSPPYG00000029571 #26	HLA-DPA1 (ENSPPYG00000017229) #25	COL11A2 (ENSPPYG00000017238) #27	RXRB (ENSPPYG00000017239) #28	SLC39A7 (ENSPPYG00000017240) #29	HSD17B8 (ENSPPYG00000017241) #30	RING1 (ENSPPYG00000017242) #31	VPS52 (ENSPPYG00000017243) #32	ENSPPYG00000025953 ##33	B3GALT4 (ENSPPYG00000017244)	WDR46 (ENSPPYG00000017245) #34	PFDN6 (ENSPPYG00000038269) #35	RGL2 (ENSPPYG00000017247) #36	TAPBP (ENSPPYG00000017248) #37
Gibbon	MODERN SPECIES	10	HLA-DRA (ENSNLEG00000006686) #7	ENSNLEG00000032832 #9	HLA-DQA1 (ENSNLEG00000032515) #11	HLA-DQB1 (ENSNLEG00000006693) #12	HLA-DQA2 (ENSNLEG00000027015) #13	HLA-DQB2 (ENSNLEG00000006713) #14	HLA-DOB (ENSNLEG00000027543) #15	TAP2 (ENSNLEG00000006714) #16	PSMB8 (ENSNLEG00000006733) #17	TAP1 (ENSNLEG00000006738) #18	PSMB9 (ENSNLEG00000006757) #19	ENSNLEG00000032895	HLA-DMB (ENSNLEG00000006770) #20	HLA-DMA (ENSNLEG00000006775) #21	ENSNLEG00000032110 #23	BRD2 (ENSNLEG00000006782) #22	ENSNLEG00000031675 #24	HLA-DPA1 (ENSNLEG00000034417) #25	HLA-DPB1 (ENSNLEG00000006801) #26	ENSNLEG00000030023 #27	RXRB (ENSNLEG00000006809) #28	SLC39A7 (ENSNLEG00000006815) #29	HSD17B8 (ENSNLEG00000006824) #30	RING1 (ENSNLEG00000006830) #31	VPS52 (ENSNLEG00000006832) #32	RPS18 (ENSNLEG00000006840) #33	B3GALT4 (ENSNLEG00000006841)	ENSNLEG00000006842 #34	PFDN6 (ENSNLEG00000034338) #35	RGL2 (ENSNLEG00000006847) #36	ENSNLEG00000006852 #37