Euarchontoglires_A	ANCESTRAL SPECIES	23	ENSGT00940000162896	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000162490	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Glires	ANCESTRAL SPECIES	24	ENSGT00940000162896	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000162490	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Rodentia	ANCESTRAL SPECIES	12	ENSGT00940000162896	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000162490	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT00940000162896	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000162490	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Myomorpha	ANCESTRAL SPECIES	8			ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Muroidea	ANCESTRAL SPECIES	8	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00390000015821	ENSGT01030000234553.b.b.d.c.a	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00390000015821	ENSGT01030000234553.b.b.d.c.a	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00390000015821	ENSGT01030000234553.b.b.d.c.a.i	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Chinese hamster chok1gshd	MODERN SPECIES	212	Nt5c3 (ENSCGRG00001013618) #7	Fkbp9 (ENSCGRG00001021370) #8	Kbtbd2 (ENSCGRG00001019964) #9	Avl9 (ENSCGRG00001000531) #10	Lsm5 (ENSCGRG00001015461) #11	ENSCGRG00001003542 #12	Pde1c (ENSCGRG00001012049) #13	Ppp1r17 (ENSCGRG00001001116) #14	Itprid1 (ENSCGRG00001021683) #15	Neurod6 (ENSCGRG00001007780) #16	ENSCGRG00001019521 #17	Adcyap1r1 (ENSCGRG00001000657) #18	Ghrhr (ENSCGRG00001023797) #19	Aqp1 (ENSCGRG00001017485) #20	Mindy4 (ENSCGRG00001018063) #21	Inmt (ENSCGRG00001016187) #22	Crhr2 (ENSCGRG00001011128) #23	Gars (ENSCGRG00001020450) #24	Ggct (ENSCGRG00001000866) #25	Nod1 (ENSCGRG00001006286) #26	Znrf2 (ENSCGRG00001004725) #27	Mturn (ENSCGRG00001020710) #28	Plekha8 (ENSCGRG00001012359) #29	Fkbp14 (ENSCGRG00001009179) #30	Scrn1 (ENSCGRG00001001373) #31	Wipf3 (ENSCGRG00001013250) #32	Prr15 (ENSCGRG00001001455) #33	Chn2 (ENSCGRG00001019164) #34	Cpvl (ENSCGRG00001012752) #35	Tril (ENSCGRG00001006970) #36	Creb5 (ENSCGRG00001018702) #37
Golden Hamster	MODERN SPECIES	683											Ppp1r17 (ENSMAUG00000009624) #14	Neurod6 (ENSMAUG00000008758) #16	ENSMAUG00000010082	Adcyap1r1 (ENSMAUG00000009134) #18	Aqp1 (ENSMAUG00000016720) #20	Inmt (ENSMAUG00000000160) #22	Crhr2 (ENSMAUG00000015362) #23	Gars (ENSMAUG00000016852) #24	Ggct (ENSMAUG00000016279) #25	Nod1 (ENSMAUG00000000376) #26	ENSMAUG00000017402 #27	Mturn (ENSMAUG00000019125) #28	Plekha8 (ENSMAUG00000016565) #29	Fkbp14 (ENSMAUG00000019388) #30	Scrn1 (ENSMAUG00000000273) #31	Wipf3 (ENSMAUG00000018801) #32	Prr15 (ENSMAUG00000010712) #33	Chn2 (ENSMAUG00000000516) #34	Cpvl (ENSMAUG00000007253) #35	Tril (ENSMAUG00000016482) #36	Creb5 (ENSMAUG00000008771) #37
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00390000015821	ENSGT01030000234553.b.b.d.c.a	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Prairie vole	MODERN SPECIES	353	Vit (ENSMOCG00000017868)	ENSMOCG00000012236	Crim1 (ENSMOCG00000019306)	ENSMOCG00000009452 ##12	ENSMOCG00000016027	ENSMOCG00000002649 #10	Lsm5 (ENSMOCG00000012018) #11	Pde1c (ENSMOCG00000005504) #13	Ppp1r17 (ENSMOCG00000007423) #14	Itprid1 (ENSMOCG00000019267) #15	Neurod6 (ENSMOCG00000012184) #16	Adcyap1r1 (ENSMOCG00000006639) #18	Ghrhr (ENSMOCG00000001328) #19	Aqp1 (ENSMOCG00000016051) #20	Mindy4 (ENSMOCG00000006426) #21	Inmt (ENSMOCG00000015765) #22	Crhr2 (ENSMOCG00000019712) #23	Gars (ENSMOCG00000017680) #24	Ggct (ENSMOCG00000001055) #25	Nod1 (ENSMOCG00000022664) #26	ENSMOCG00000008922 #27	Mturn (ENSMOCG00000019319) #28	Hibadh (ENSMOCG00000020758)	Tax1bp1 (ENSMOCG00000011041)	Jazf1 (ENSMOCG00000019670)	Creb5 (ENSMOCG00000012076) #37	Tril (ENSMOCG00000001138) #36	Cpvl (ENSMOCG00000021500) #35	ENSMOCG00000002376	Chn2 (ENSMOCG00000020808) #34	ENSMOCG00000006975 ##12
Northern American deer mouse	MODERN SPECIES	16	Mmrn1 (ENSPEMG00000019338)	Ccser1 (ENSPEMG00000019701)	ENSPEMG00000015927 #9	Avl9 (ENSPEMG00000019324) #10	ENSPEMG00000019994 #11	Pde1c (ENSPEMG00000001699) #13	Ppp1r17 (ENSPEMG00000019366) #14	Itprid1 (ENSPEMG00000019451) #15	ENSPEMG00000024569	ENSPEMG00000030747	Neurod6 (ENSPEMG00000027820) #16	Adcyap1r1 (ENSPEMG00000020118) #18	Ghrhr (ENSPEMG00000019584) #19	Aqp1 (ENSPEMG00000025322) #20	Mindy4 (ENSPEMG00000019826) #21	Inmt (ENSPEMG00000019772) #22	Crhr2 (ENSPEMG00000019853) #23	Gars (ENSPEMG00000019930) #24	ENSPEMG00000029444	Ggct (ENSPEMG00000019318) #25	Nod1 (ENSPEMG00000019408) #26	ENSPEMG00000019334 #27	Mturn (ENSPEMG00000030724) #28	Plekha8 (ENSPEMG00000010696) #29	Fkbp14 (ENSPEMG00000024960) #30	Scrn1 (ENSPEMG00000029796) #31	Wipf3 (ENSPEMG00000024262) #32	Prr15 (ENSPEMG00000022428) #33	Chn2 (ENSPEMG00000021269) #34	Cpvl (ENSPEMG00000018828) #35	Tril (ENSPEMG00000014631) #36
Murinae	ANCESTRAL SPECIES	4	ENSGT01030000234553.b.b.d.c.a.o.b.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.a.a.b	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Mus	ANCESTRAL SPECIES	20	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.b.a.a.a	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Mus_A	ANCESTRAL SPECIES	7	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.b.a.a.a	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Mus_B	ANCESTRAL SPECIES	20	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.b.a.b	ENSGT01030000234553.b.b.d.c.a.o.b.a.a.a	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
Mus_C	ANCESTRAL SPECIES	19	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.b.a.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.b.a.b	ENSGT00390000012959.b #7	ENSGT00940000157125 #8	ENSGT00940000156069 #9	ENSGT00390000010255 #10	ENSGT00390000001455 #11	ENSGT00940000155331.A #13	ENSGT00390000005586 #14	ENSGT00940000161762 #15	ENSGT00940000159827 #16	ENSGT00940000157362 #18	ENSGT00940000159858 #19	ENSGT00940000157015 #20	ENSGT00940000159600 #21	ENSGT00390000011708.a.k.a #22	ENSGT00940000156795 #23	ENSGT00940000153759.a.a #24	ENSGT00500000044921.b #25	ENSGT00940000157845 #26	ENSGT00940000159017.a.a #27	ENSGT00500000045044 #28	ENSGT00940000157288 #29	ENSGT00940000157858 #30	ENSGT00390000013474.b.b #31	ENSGT00940000160267 #32	ENSGT00940000154534.b.b #33	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000159498 #35	ENSGT00940000161975 #36	ENSGT00940000156420 #37
spretus	MODERN SPECIES	15	MGP_SPRETEiJ_G0029429	MGP_SPRETEiJ_G0029428	Nt5c3 (MGP_SPRETEiJ_G0029427) #7	Fkbp9 (MGP_SPRETEiJ_G0029426) #8	Kbtbd2 (MGP_SPRETEiJ_G0029425) #9	Avl9 (MGP_SPRETEiJ_G0029424) #10	Lsm5 (MGP_SPRETEiJ_G0029423) #11	Pde1c (MGP_SPRETEiJ_G0029422) #13	Ppp1r17 (MGP_SPRETEiJ_G0029421) #14	Itprid1 (MGP_SPRETEiJ_G0029420) #15	Neurod6 (MGP_SPRETEiJ_G0029419) #16	Adcyap1r1 (MGP_SPRETEiJ_G0029418) #18	Ghrhr (MGP_SPRETEiJ_G0029417) #19	Aqp1 (MGP_SPRETEiJ_G0029416) #20	Mindy4 (MGP_SPRETEiJ_G0029415) #21	Inmt (MGP_SPRETEiJ_G0029414) #22	Crhr2 (MGP_SPRETEiJ_G0029413) #23	Gars (MGP_SPRETEiJ_G0029412) #24	Ggct (MGP_SPRETEiJ_G0029411) #25	Nod1 (MGP_SPRETEiJ_G0029410) #26	Znrf2 (MGP_SPRETEiJ_G0029409) #27	Mturn (MGP_SPRETEiJ_G0029408) #28	Plekha8 (MGP_SPRETEiJ_G0029407) #29	Scrn1 (MGP_SPRETEiJ_G0029405) #31	MGP_SPRETEiJ_G0029404 #32	Prr15 (MGP_SPRETEiJ_G0029403) #33	Chn2 (MGP_SPRETEiJ_G0029402) #34	Cpvl (MGP_SPRETEiJ_G0029401) #35	Tril (MGP_SPRETEiJ_G0029400) #36	Creb5 (MGP_SPRETEiJ_G0029399) #37	Jazf1 (MGP_SPRETEiJ_G0029398)
Steppe mouse	MODERN SPECIES	267								ENSMSIG00000020912 #13	Ppp1r17 (ENSMSIG00000020953) #14	Itprid1 (ENSMSIG00000020961) #15	Neurod6 (ENSMSIG00000020985) #16	Adcyap1r1 (ENSMSIG00000020999) #18	Ghrhr (ENSMSIG00000021833) #19	ENSMSIG00000021864 #20	Mindy4 (ENSMSIG00000021881) #21	Inmt (ENSMSIG00000021912) #22	Crhr2 (ENSMSIG00000021921) #23	Gars (ENSMSIG00000022024) #24	Ggct (ENSMSIG00000022090) #25	Nod1 (ENSMSIG00000022115) #26	ENSMSIG00000022143	ENSMSIG00000022149 #27	Mturn (ENSMSIG00000022171) #28	Plekha8 (ENSMSIG00000022218) #29	Fkbp14 (ENSMSIG00000022269) #30	Scrn1 (ENSMSIG00000022293) #31	Wipf3 (ENSMSIG00000022314) #32	ENSMSIG00000022372	Prr15 (ENSMSIG00000022378) #33	Chn2 (ENSMSIG00000022395) #34	Cpvl (ENSMSIG00000023569) #35
Mouse	MODERN SPECIES	15	Vmn1r5 (ENSMUSG00000090346)	Vmn1r4 (ENSMUSG00000071893)	Nt5c3 (ENSMUSG00000029780) #7	Fkbp9 (ENSMUSG00000029781) #8	Kbtbd2 (ENSMUSG00000059486) #9	Avl9 (ENSMUSG00000029787) #10	Lsm5 (ENSMUSG00000091625) #11	Pde1c (ENSMUSG00000004347) #13	Ppp1r17 (ENSMUSG00000002930) #14	Itprid1 (ENSMUSG00000037973) #15	Neurod6 (ENSMUSG00000037984) #16	Adcyap1r1 (ENSMUSG00000029778) #18	Ghrhr (ENSMUSG00000004654) #19	Aqp1 (ENSMUSG00000004655) #20	Mindy4 (ENSMUSG00000038022) #21	Inmt (ENSMUSG00000003477) #22	Crhr2 (ENSMUSG00000003476) #23	Gars (ENSMUSG00000029777) #24	Ggct (ENSMUSG00000002797) #25	Nod1 (ENSMUSG00000038058) #26	Znrf2 (ENSMUSG00000058446) #27	Mturn (ENSMUSG00000038065) #28	Plekha8 (ENSMUSG00000005225) #29	Fkbp14 (ENSMUSG00000038074) #30	Scrn1 (ENSMUSG00000019124) #31	Wipf3 (ENSMUSG00000086040) #32	Prr15 (ENSMUSG00000045725) #33	Chn2 (ENSMUSG00000004633) #34	Cpvl (ENSMUSG00000052955) #35	Tril (ENSMUSG00000043496) #36	Creb5 (ENSMUSG00000053007) #37
Ryukyu mouse	MODERN SPECIES	15	Vmn1r12 (MGP_CAROLIEiJ_G0028428)	Vmn1r11 (MGP_CAROLIEiJ_G0028427)	Nt5c3 (MGP_CAROLIEiJ_G0028425) #7	Fkbp9 (MGP_CAROLIEiJ_G0028424) #8	Kbtbd2 (MGP_CAROLIEiJ_G0028423) #9	Avl9 (MGP_CAROLIEiJ_G0028422) #10	Lsm5 (MGP_CAROLIEiJ_G0028421) #11	Pde1c (MGP_CAROLIEiJ_G0028420) #13	Ppp1r17 (MGP_CAROLIEiJ_G0028419) #14	Itprid1 (MGP_CAROLIEiJ_G0028418) #15	Neurod6 (MGP_CAROLIEiJ_G0028417) #16	Adcyap1r1 (MGP_CAROLIEiJ_G0028416) #18	Ghrhr (MGP_CAROLIEiJ_G0028415) #19	Aqp1 (MGP_CAROLIEiJ_G0028414) #20	Mindy4 (MGP_CAROLIEiJ_G0028413) #21	Inmt (MGP_CAROLIEiJ_G0028412) #22	Crhr2 (MGP_CAROLIEiJ_G0028411) #23	Gars (MGP_CAROLIEiJ_G0028410) #24	Ggct (MGP_CAROLIEiJ_G0028409) #25	Nod1 (MGP_CAROLIEiJ_G0028408) #26	Znrf2 (MGP_CAROLIEiJ_G0028407) #27	Mturn (MGP_CAROLIEiJ_G0028406) #28	Plekha8 (MGP_CAROLIEiJ_G0028405) #29	MGP_CAROLIEiJ_G0028404 #30	Scrn1 (MGP_CAROLIEiJ_G0028403) #31	Wipf3 (MGP_CAROLIEiJ_G0028402) #32	Prr15 (MGP_CAROLIEiJ_G0028401) #33	Chn2 (MGP_CAROLIEiJ_G0028400) #34	Cpvl (MGP_CAROLIEiJ_G0028399) #35	Tril (MGP_CAROLIEiJ_G0028398) #36	Creb5 (MGP_CAROLIEiJ_G0028397) #37
Shrew mouse	MODERN SPECIES	11	Vmn1r11 (MGP_PahariEiJ_G0022178)	MGP_PahariEiJ_G0022177	Nt5c3 (MGP_PahariEiJ_G0022175) #7	Fkbp9 (MGP_PahariEiJ_G0022174) #8	Kbtbd2 (MGP_PahariEiJ_G0022173) #9	Avl9 (MGP_PahariEiJ_G0022172) #10	Lsm5 (MGP_PahariEiJ_G0022171) #11	Pde1c (MGP_PahariEiJ_G0022170) #13	Ppp1r17 (MGP_PahariEiJ_G0022169) #14	Itprid1 (MGP_PahariEiJ_G0022168) #15	Neurod6 (MGP_PahariEiJ_G0022167) #16	Adcyap1r1 (MGP_PahariEiJ_G0022166) #18	Ghrhr (MGP_PahariEiJ_G0022165) #19	Aqp1 (MGP_PahariEiJ_G0022164) #20	Mindy4 (MGP_PahariEiJ_G0022163) #21	Inmt (MGP_PahariEiJ_G0022162) #22	Crhr2 (MGP_PahariEiJ_G0022161) #23	Gars (MGP_PahariEiJ_G0022160) #24	Ggct (MGP_PahariEiJ_G0022159) #25	Nod1 (MGP_PahariEiJ_G0022158) #26	Znrf2 (MGP_PahariEiJ_G0022157) #27	Mturn (MGP_PahariEiJ_G0022156) #28	Plekha8 (MGP_PahariEiJ_G0022155) #29	Fkbp14 (MGP_PahariEiJ_G0022154) #30	Scrn1 (MGP_PahariEiJ_G0022153) #31	Wipf3 (MGP_PahariEiJ_G0022152) #32	Prr15 (MGP_PahariEiJ_G0022151) #33	Chn2 (MGP_PahariEiJ_G0022150) #34	Cpvl (MGP_PahariEiJ_G0022149) #35	Tril (MGP_PahariEiJ_G0022148) #36	Creb5 (MGP_PahariEiJ_G0022147) #37
Rat	MODERN SPECIES	14	Vom1r65 (ENSRNOG00000057387)	Nt5c3a (ENSRNOG00000005981) #7	Fkbp9 (ENSRNOG00000005478) #8	Kbtbd2 (ENSRNOG00000013809) #9	Avl9 (ENSRNOG00000013314) #10	Lsm5 (ENSRNOG00000042126) #11	ENSRNOG00000069707 ##12	Pde1c (ENSRNOG00000012337) #13	Ppp1r17 (ENSRNOG00000012235) #14	Itprid1 (ENSRNOG00000012165) #15	Neurod6 (ENSRNOG00000026055) #16	Adcyap1r1 (ENSRNOG00000012098) #18	Ghrhr (ENSRNOG00000011808) #19	Aqp1 (ENSRNOG00000011648) #20	Mindy4 (ENSRNOG00000011530) #21	Inmt (ENSRNOG00000011250) #22	Crhr2 (ENSRNOG00000011145) #23	Gars1 (ENSRNOG00000011052) #24	AABR07060610.1 (ENSRNOG00000033748)	Ggct (ENSRNOG00000034084) #25	Nod1 (ENSRNOG00000010629) #26	Znrf2 (ENSRNOG00000049057) #27	ENSRNOG00000067229	Mturn (ENSRNOG00000010205) #28	Plekha8 (ENSRNOG00000009971) #29	Fkbp14 (ENSRNOG00000009886) #30	Scrn1 (ENSRNOG00000009636) #31	Wipf3 (ENSRNOG00000009571) #32	Prr15 (ENSRNOG00000009564) #33	Chn2 (ENSRNOG00000009411) #34	Cpvl (ENSRNOG00000009172) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	565	Nt5c3 (ENSNGAG00000003148) #7	Fkbp9 (ENSNGAG00000018799) #8	Kbtbd2 (ENSNGAG00000005350) #9	ENSNGAG00000018445	Avl9 (ENSNGAG00000001626) #10	ENSNGAG00000024142 #11	ENSNGAG00000010136	Pde1c (ENSNGAG00000012440) #13	Ppp1r17 (ENSNGAG00000024049) #14	Itprid1 (ENSNGAG00000015927) #15	Neurod6 (ENSNGAG00000002285) #16	Adcyap1r1 (ENSNGAG00000019071) #18	Ghrhr (ENSNGAG00000018741) #19	Aqp1 (ENSNGAG00000003825) #20	Mindy4 (ENSNGAG00000014680) #21	Inmt (ENSNGAG00000023808) #22	Crhr2 (ENSNGAG00000019386) #23	Gars (ENSNGAG00000021844) #24
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00940000156420 #37	ENSGT00940000161975 #36	ENSGT00940000159498 #35	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000154534.b.b #33	ENSGT00940000160267 #32	ENSGT00390000013474.b.b #31	ENSGT00940000157858 #30	ENSGT00940000157288 #29	ENSGT00500000045044 #28	ENSGT00940000159017.a.a #27	ENSGT00940000157845 #26	ENSGT00500000044921.b #25	ENSGT00940000153759.a.a #24	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a #22	ENSGT00940000159600 #21	ENSGT00940000157015 #20	ENSGT00940000159858 #19	ENSGT00940000157362 #18	ENSGT00940000159827 #16	ENSGT00940000161762 #15	ENSGT00390000005586 #14	ENSGT00940000155331.A #13	ENSGT00390000001455 #11	ENSGT00390000010255 #10	ENSGT00940000156069 #9	ENSGT00940000162490	ENSGT00940000157125 #8	ENSGT00390000012959.b #7	ENSGT00940000162896
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00940000156420 #37	ENSGT00940000161975 #36	ENSGT00940000159498 #35	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000154534.b.b #33	ENSGT00940000160267 #32	ENSGT00390000013474.b.b #31	ENSGT00940000157858 #30	ENSGT00940000157288 #29	ENSGT00500000045044 #28	ENSGT00940000159017.a.a #27	ENSGT00940000157845 #26	ENSGT00500000044921.b #25	ENSGT00940000153759.a.a #24	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a #22	ENSGT00940000159600 #21	ENSGT00940000157015 #20	ENSGT00940000159858 #19	ENSGT00940000157362 #18	ENSGT00940000159827 #16	ENSGT00940000161762 #15	ENSGT00390000005586 #14	ENSGT00940000155331.A #13	ENSGT00390000001455 #11	ENSGT00390000010255 #10	ENSGT00940000156069 #9	ENSGT00940000162490	ENSGT00940000157125 #8	ENSGT00390000012959.b #7	ENSGT00940000162896
Marmotini	ANCESTRAL SPECIES	37	ENSGT00940000161975 #36	ENSGT00940000159498 #35	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000154534.b.b #33	ENSGT00940000160267 #32	ENSGT00390000013474.b.b #31	ENSGT00940000157858 #30	ENSGT00940000157288 #29	ENSGT00500000045044 #28	ENSGT00940000159017.a.a #27	ENSGT00940000165512	ENSGT00940000157845 #26	ENSGT00500000044921.b #25	ENSGT00940000153759.a.a #24	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a #22	ENSGT00940000159600 #21	ENSGT00940000157015 #20	ENSGT00940000159858 #19	ENSGT00940000157362 #18	ENSGT00940000159827 #16	ENSGT00940000161762 #15	ENSGT00390000005586 #14	ENSGT00940000155331.A #13	ENSGT00390000001455.fb #11	ENSGT00390000010255 #10	ENSGT00940000156069 #9	ENSGT00940000162490	ENSGT00940000157125 #8	ENSGT00390000012959.b.q #7	ENSGT00390000000803
Marmotini_b	ANCESTRAL SPECIES	26	ENSGT00940000161975 #36	ENSGT00940000159498 #35	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000154534.b.b #33	ENSGT00940000160267 #32	ENSGT00390000013474.b.b #31	ENSGT00940000157858 #30	ENSGT00940000157288 #29	ENSGT00500000045044 #28	ENSGT00940000159017.a.a #27	ENSGT00940000165512	ENSGT00940000157845 #26	ENSGT00500000044921.b #25	ENSGT00940000153759.a.a #24	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a #22	ENSGT00940000159600 #21	ENSGT00940000157015 #20	ENSGT00940000159858 #19	ENSGT00940000157362 #18	ENSGT00940000159827 #16	ENSGT00940000161762 #15	ENSGT00390000005586 #14	ENSGT00940000155331.A #13	ENSGT00390000001455.fb #11	ENSGT00390000010255 #10	ENSGT00940000156069 #9	ENSGT00940000162490	ENSGT00940000157125 #8	ENSGT00390000012959.b.q #7	ENSGT00390000000803
Squirrel	MODERN SPECIES	78	CREB5 (ENSSTOG00000013279) #37	CPVL (ENSSTOG00000010505) #35	CHN2 (ENSSTOG00000002346) #34	PRR15 (ENSSTOG00000020339) #33	WIPF3 (ENSSTOG00000009012) #32	SCRN1 (ENSSTOG00000009029) #31	FKBP14 (ENSSTOG00000005235) #30	PLEKHA8 (ENSSTOG00000009052) #29	MTURN (ENSSTOG00000021099) #28	ENSSTOG00000034241	ENSSTOG00000033923 #27	NOD1 (ENSSTOG00000022644) #26	GGCT (ENSSTOG00000015484) #25	GARS1 (ENSSTOG00000015493) #24	CRHR2 (ENSSTOG00000015502) #23	INMT (ENSSTOG00000027441) #22	MINDY4 (ENSSTOG00000022279) #21	AQP1 (ENSSTOG00000015517) #20	GHRHR (ENSSTOG00000015519) #19	ADCYAP1R1 (ENSSTOG00000013243) #18	NEUROD6 (ENSSTOG00000002956) #16	ITPRID1 (ENSSTOG00000002962) #15	PPP1R17 (ENSSTOG00000002987) #14	PDE1C (ENSSTOG00000002994) #13	LSM5 (ENSSTOG00000012662) #11	AVL9 (ENSSTOG00000012669) #10	KBTBD2 (ENSSTOG00000012679) #9	ENSSTOG00000024497	FKBP9 (ENSSTOG00000019843) #8	ENSSTOG00000026363 #7	BBS9 (ENSSTOG00000009855)
Arctic ground squirrel	MODERN SPECIES	250						SCRN1 (ENSUPAG00010007165) #31	FKBP14 (ENSUPAG00010007179) #30	PLEKHA8 (ENSUPAG00010007195) #29	MTURN (ENSUPAG00010007219) #28	ZNRF2 (ENSUPAG00010007266) #27	ENSUPAG00010007281	NOD1 (ENSUPAG00010007290) #26	GGCT (ENSUPAG00010007357) #25	GARS1 (ENSUPAG00010007365) #24	CRHR2 (ENSUPAG00010007394) #23	INMT (ENSUPAG00010007565) #22	MINDY4 (ENSUPAG00010007571) #21	AQP1 (ENSUPAG00010007645) #20	GHRHR (ENSUPAG00010007648) #19	ADCYAP1R1 (ENSUPAG00010007676) #18	NEUROD6 (ENSUPAG00010008757) #16	ITPRID1 (ENSUPAG00010008761) #15	PPP1R17 (ENSUPAG00010008804) #14	PDE1C (ENSUPAG00010008833) #13	ENSUPAG00010010249 #11	AVL9 (ENSUPAG00010010280) #10	KBTBD2 (ENSUPAG00010010292) #9	ENSUPAG00010010304	FKBP9 (ENSUPAG00010010313) #8	NT5C3A (ENSUPAG00010010352) #7
Alpin marmot	MODERN SPECIES	26	CPVL (ENSMMMG00000006841) #35	CHN2 (ENSMMMG00000006900) #34	PRR15 (ENSMMMG00000007372) #33	WIPF3 (ENSMMMG00000007380) #32	SCRN1 (ENSMMMG00000007428) #31	FKBP14 (ENSMMMG00000007497) #30	ENSMMMG00000007508	PLEKHA8 (ENSMMMG00000007517) #29	MTURN (ENSMMMG00000007542) #28	ENSMMMG00000007598 #27	ENSMMMG00000007602	NOD1 (ENSMMMG00000007605) #26	GGCT (ENSMMMG00000007652) #25	GARS1 (ENSMMMG00000007668) #24	CRHR2 (ENSMMMG00000007864) #23	INMT (ENSMMMG00000008027) #22	MINDY4 (ENSMMMG00000008032) #21	AQP1 (ENSMMMG00000008060) #20	GHRHR (ENSMMMG00000008069) #19	ADCYAP1R1 (ENSMMMG00000008134) #18	NEUROD6 (ENSMMMG00000008704) #16	ITPRID1 (ENSMMMG00000008717) #15	PPP1R17 (ENSMMMG00000008766) #14	PDE1C (ENSMMMG00000008812) #13	ENSMMMG00000010773 #11	AVL9 (ENSMMMG00000010815) #10	KBTBD2 (ENSMMMG00000010841) #9	ENSMMMG00000010853	FKBP9 (ENSMMMG00000010860) #8	NT5C3A (ENSMMMG00000010876) #7	ENSMMMG00000010932
Eurasian red squirrel	MODERN SPECIES	17	TRIL (ENSSVLG00005013079) #36	CPVL (ENSSVLG00005013200) #35	CHN2 (ENSSVLG00005013621) #34	PRR15 (ENSSVLG00005013762) #33	WIPF3 (ENSSVLG00005013843) #32	SCRN1 (ENSSVLG00005013986) #31	FKBP14 (ENSSVLG00005014087) #30	PLEKHA8 (ENSSVLG00005014153) #29	MTURN (ENSSVLG00005014224) #28	ENSSVLG00005014275	ZNRF2 (ENSSVLG00005014320) #27	NOD1 (ENSSVLG00005014361) #26	GGCT (ENSSVLG00005014411) #25	GARS1 (ENSSVLG00005014500) #24	CRHR2 (ENSSVLG00005014654) #23	INMT (ENSSVLG00005015252) #22	MINDY4 (ENSSVLG00005015309) #21	AQP1 (ENSSVLG00005015339) #20	GHRHR (ENSSVLG00005015402) #19	ADCYAP1R1 (ENSSVLG00005015714) #18	NEUROD6 (ENSSVLG00005016325) #16	ITPRID1 (ENSSVLG00005016358) #15	PPP1R17 (ENSSVLG00005016581) #14	PDE1C (ENSSVLG00005016706) #13	ENSSVLG00005017324 #11	AVL9 (ENSSVLG00005017421) #10	KBTBD2 (ENSSVLG00005017556) #9	ENSSVLG00005017628	RP9 (ENSSVLG00005017672)	FKBP9 (ENSSVLG00005017766) #8	NT5C3A (ENSSVLG00005017848) #7
Hystricomorpha	ANCESTRAL SPECIES	14	ENSGT00940000161975 #36	ENSGT00940000159498 #35	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000154534.b.b #33	ENSGT00940000160267 #32	ENSGT00390000013474.b.b #31	ENSGT00940000157858 #30	ENSGT00940000157288 #29	ENSGT00500000045044 #28	ENSGT00460000041667	ENSGT00940000159017.a.a #27	ENSGT00940000157845 #26	ENSGT00500000044921.b #25	ENSGT00940000153759.a.a #24	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a #22	ENSGT00940000159600 #21	ENSGT00940000157015 #20	ENSGT00940000159858 #19	ENSGT00940000157362 #18	ENSGT00940000159827 #16	ENSGT00940000161762 #15	ENSGT00390000005586 #14	ENSGT00940000155331.A #13	ENSGT00390000007738	ENSGT00950000183133.f	ENSGT00390000005599	ENSGT00940000153272.a.b	ENSGT00390000002915	ENSGT00940000157992	ENSGT00390000001439.k
Naked mole-rat female	MODERN SPECIES	5	ENSHGLG00000017765	PRR15 (ENSHGLG00000047965) #33	SCRN1 (ENSHGLG00000008257) #31	FKBP14 (ENSHGLG00000006567) #30	ENSHGLG00000007305	PLEKHA8 (ENSHGLG00000005404) #29	ENSHGLG00000011844	MTURN (ENSHGLG00000044384) #28	ENSHGLG00000016122	ZNRF2 (ENSHGLG00000039084) #27	ENSHGLG00000032561	GGCT (ENSHGLG00000034422) #25	GARS1 (ENSHGLG00000016342) #24	CRHR2 (ENSHGLG00000018699) #23	ENSHGLG00000049417	INMT (ENSHGLG00000035929) #22	MINDY4 (ENSHGLG00000004247) #21	AQP1 (ENSHGLG00000045736) #20	ENSHGLG00000035477 #19	ADCYAP1R1 (ENSHGLG00000005424) #18	ENSHGLG00000048770	NEUROD6 (ENSHGLG00000049659) #16	ITPRID1 (ENSHGLG00000005782) #15	PPP1R17 (ENSHGLG00000046223) #14	ENSHGLG00000015158 #13	ENSHGLG00000041283	ENSHGLG00000048862	ENSHGLG00000045523	ENSHGLG00000009099	ENSHGLG00000010140	SLC35B4 (ENSHGLG00000045695)
Hystricomorpha_a	ANCESTRAL SPECIES	41	ENSGT00940000161975 #36	ENSGT00940000159498 #35	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000154534.b.b #33	ENSGT00940000160267 #32	ENSGT00390000013474.b.b #31	ENSGT00940000157858 #30	ENSGT00940000157288 #29	ENSGT00500000045044 #28	ENSGT00460000041667	ENSGT00940000159017.a.a #27	ENSGT00940000157845 #26	ENSGT00500000044921.b #25	ENSGT00940000153759.a.a #24	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a #22	ENSGT00940000159600 #21	ENSGT00940000157015 #20	ENSGT00940000159858 #19	ENSGT00940000157362 #18	ENSGT00940000159827 #16	ENSGT00940000161762 #15	ENSGT00390000005586 #14	ENSGT00940000155331.A #13	ENSGT00950000183133.f	ENSGT00390000005599	ENSGT00940000153272.a.b	ENSGT00390000002915	ENSGT00940000157992	ENSGT00390000001439.k	ENSGT00390000000903.a
Hystricomorpha_b	ANCESTRAL SPECIES	39	ENSGT00940000161975 #36	ENSGT00940000159498 #35	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000154534.b.b #33	ENSGT00940000160267 #32	ENSGT00390000013474.b.b #31	ENSGT00940000157858 #30	ENSGT00940000157288 #29	ENSGT00500000045044 #28	ENSGT00460000041667	ENSGT00940000159017.a.a #27	ENSGT00940000157845 #26	ENSGT00500000044921.b #25	ENSGT00940000153759.a.a #24	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a #22	ENSGT00940000159600 #21	ENSGT00940000157015 #20	ENSGT00940000159858 #19	ENSGT00940000157362 #18	ENSGT00940000159827 #16	ENSGT00940000161762 #15	ENSGT00390000005586 #14	ENSGT00940000155331.A #13	ENSGT00950000183133.f	ENSGT00390000005599	ENSGT00940000153272.a.b	ENSGT00390000002915	ENSGT00940000157992	ENSGT00390000001439.k	ENSGT00390000000903.a
Long-tailed chinchilla	MODERN SPECIES	117	TRIL (ENSCLAG00000018111) #36	CPVL (ENSCLAG00000009635) #35	CHN2 (ENSCLAG00000014307) #34	PRR15 (ENSCLAG00000010326) #33	WIPF3 (ENSCLAG00000011493) #32	SCRN1 (ENSCLAG00000010543) #31	FKBP14 (ENSCLAG00000010774) #30	PLEKHA8 (ENSCLAG00000011413) #29	MTURN (ENSCLAG00000011854) #28	ENSCLAG00000016063	ENSCLAG00000010973 #27	NOD1 (ENSCLAG00000011448) #26	GGCT (ENSCLAG00000012144) #25	GARS1 (ENSCLAG00000007985) #24	CRHR2 (ENSCLAG00000012401) #23	INMT (ENSCLAG00000016181) #22	MINDY4 (ENSCLAG00000013883) #21	AQP1 (ENSCLAG00000006088) #20	GHRHR (ENSCLAG00000006687) #19	ADCYAP1R1 (ENSCLAG00000006669) #18	NEUROD6 (ENSCLAG00000008613) #16	ITPRID1 (ENSCLAG00000010687) #15	PPP1R17 (ENSCLAG00000008585) #14	PDE1C (ENSCLAG00000014841) #13	ENSCLAG00000011912	ENSCLAG00000017748	GLYATL3 (ENSCLAG00000007498)	CENPQ (ENSCLAG00000008256)	AKR1B1 (ENSCLAG00000012329)	SLC35B4 (ENSCLAG00000014975)	LRGUK (ENSCLAG00000007385)
Degu	MODERN SPECIES	56	ENSODEG00000009470 #35	ENSODEG00000008241	CHN2 (ENSODEG00000008637) #34	PRR15 (ENSODEG00000019540) #33	ENSODEG00000019511	WIPF3 (ENSODEG00000007842) #32	SCRN1 (ENSODEG00000008733) #31	FKBP14 (ENSODEG00000009158) #30	PLEKHA8 (ENSODEG00000010642) #29	MTURN (ENSODEG00000008081) #28	ENSODEG00000009309 #27	NOD1 (ENSODEG00000008060) #26	GGCT (ENSODEG00000008799) #25	GARS1 (ENSODEG00000008246) #24	CRHR2 (ENSODEG00000013231) #23	INMT (ENSODEG00000009377) #22	MINDY4 (ENSODEG00000010027) #21	AQP1 (ENSODEG00000010019) #20	GHRHR (ENSODEG00000009472) #19	ADCYAP1R1 (ENSODEG00000008909) #18	NEUROD6 (ENSODEG00000011322) #16	ITPRID1 (ENSODEG00000010843) #15	PPP1R17 (ENSODEG00000008669) #14	PDE1C (ENSODEG00000009048) #13	ENSODEG00000009988	ENSODEG00000009286	ENSODEG00000010126	CENPQ (ENSODEG00000010568)	ENSODEG00000010302	SLC35B4 (ENSODEG00000009840)	LRGUK (ENSODEG00000008661)
Guinea pig	MODERN SPECIES	44	CHCHD3 (ENSCPOG00000030525)	EXOC4 (ENSCPOG00000036022)	LRGUK (ENSCPOG00000006764)	SLC35B4 (ENSCPOG00000005594)	AKR1B1 (ENSCPOG00000001285)	CENPQ (ENSCPOG00000008301)	GLYATL3 (ENSCPOG00000034672)	ENSCPOG00000026887	PDE1C (ENSCPOG00000001982) #13	PPP1R17 (ENSCPOG00000009777) #14	NEUROD6 (ENSCPOG00000006406) #16	ADCYAP1R1 (ENSCPOG00000006008) #18	GHRHR (ENSCPOG00000011400) #19	AQP1 (ENSCPOG00000011393) #20	MINDY4 (ENSCPOG00000011378) #21	ENSCPOG00000024339 #22	CRHR2 (ENSCPOG00000020502) #23	GARS1 (ENSCPOG00000007547) #24	GGCT (ENSCPOG00000024870) #25	NOD1 (ENSCPOG00000014360) #26	ENSCPOG00000027612 #27	MTURN (ENSCPOG00000031591) #28	PLEKHA8 (ENSCPOG00000005025) #29	FKBP14 (ENSCPOG00000040393) #30	SCRN1 (ENSCPOG00000006943) #31	WIPF3 (ENSCPOG00000006935) #32	CHN2 (ENSCPOG00000013533) #34	CPVL (ENSCPOG00000013406) #35	TRIL (ENSCPOG00000024604) #36	CREB5 (ENSCPOG00000013545) #37	JAZF1 (ENSCPOG00000034687)
Lagomorpha	ANCESTRAL SPECIES	39	ENSGT00390000003635	ENSGT00940000156420 #37	ENSGT00940000161975 #36	ENSGT00940000159498 #35	ENSGT01030000234635.a.b.a.a #34	ENSGT00940000154534.b.b #33	ENSGT00940000160267 #32	ENSGT00390000013474.b.b #31	ENSGT00940000157858 #30	ENSGT00940000157288 #29	ENSGT00940000159017.a.a #27	ENSGT00940000157845 #26	ENSGT00500000044921.b #25	ENSGT00940000153759.a.a #24	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a #22	ENSGT00940000159600 #21	ENSGT00940000157015 #20	ENSGT00940000159858 #19	ENSGT00940000157362 #18	ENSGT00940000159827 #16	ENSGT00940000161762 #15	ENSGT00390000005586 #14	ENSGT00940000155331.A #13	ENSGT00390000001455 #11	ENSGT00390000010255 #10	ENSGT00940000156069 #9	ENSGT00940000157125 #8	ENSGT00390000012959.b #7	ENSGT00940000162896	ENSGT00390000000803
Pika	MODERN SPECIES	36															CRHR2 (ENSOPRG00000006511) #23	INMT (ENSOPRG00000006520) #22	MINDY4 (ENSOPRG00000006523) #21	AQP1 (ENSOPRG00000006536) #20	GHRHR (ENSOPRG00000006538) #19	ADCYAP1R1 (ENSOPRG00000006552) #18	NEUROD6 (ENSOPRG00000006565) #16	ENSOPRG00000006578 #15	PPP1R17 (ENSOPRG00000006591) #14
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	1	CPVL (ENSOCUG00000016573) #35	ENSOCUG00000009401 #34	PRR15 (ENSOCUG00000009403) #33	WIPF3 (ENSOCUG00000000802) #32	SCRN1 (ENSOCUG00000000804) #31	FKBP14 (ENSOCUG00000000805) #30	PLEKHA8 (ENSOCUG00000000807) #29	ENSOCUG00000036408	ENSOCUG00000036913 #27	ENSOCUG00000039679 #27	NOD1 (ENSOCUG00000005277) #26	GGCT (ENSOCUG00000005280) #25	GARS1 (ENSOCUG00000005295) #24	CRHR2 (ENSOCUG00000024444) #23	ENSOCUG00000023063 #22	INMT (ENSOCUG00000024221) #22	MINDY4 (ENSOCUG00000006022) #21	ENSOCUG00000022666 #20	ADCYAP1R1 (ENSOCUG00000000120) #18	ITPRID1 (ENSOCUG00000009101) #15	PPP1R17 (ENSOCUG00000009110) #14	PDE1C (ENSOCUG00000009113) #13	ENSOCUG00000032361	ENSOCUG00000031371	ENSOCUG00000012951	ENSOCUG00000029043 #11	AVL9 (ENSOCUG00000012508) #10	KBTBD2 (ENSOCUG00000012525) #9	FKBP9 (ENSOCUG00000010668) #8	NT5C3A (ENSOCUG00000005016) #7	RP9 (ENSOCUG00000029333)
Rabbit	MODERN SPECIES	1	NT5C3A (ENSOCUG00000005016) #7	FKBP9 (ENSOCUG00000010668) #8	KBTBD2 (ENSOCUG00000012525) #9	AVL9 (ENSOCUG00000012508) #10	ENSOCUG00000029043 #11	ENSOCUG00000012951	ENSOCUG00000031371	ENSOCUG00000032361	PDE1C (ENSOCUG00000009113) #13	PPP1R17 (ENSOCUG00000009110) #14	ITPRID1 (ENSOCUG00000009101) #15	ADCYAP1R1 (ENSOCUG00000000120) #18	ENSOCUG00000022666 #20	MINDY4 (ENSOCUG00000006022) #21	INMT (ENSOCUG00000024221) #22	ENSOCUG00000023063 #22	CRHR2 (ENSOCUG00000024444) #23	GARS1 (ENSOCUG00000005295) #24	GGCT (ENSOCUG00000005280) #25	NOD1 (ENSOCUG00000005277) #26	ENSOCUG00000039679 #27	ENSOCUG00000036913 #27	ENSOCUG00000036408	PLEKHA8 (ENSOCUG00000000807) #29	FKBP14 (ENSOCUG00000000805) #30	SCRN1 (ENSOCUG00000000804) #31	WIPF3 (ENSOCUG00000000802) #32	PRR15 (ENSOCUG00000009403) #33	ENSOCUG00000009401 #34	CPVL (ENSOCUG00000016573) #35	ENSOCUG00000026897 #36