Tetrapoda ANCESTRAL SPECIES 6 ENSGT00940000160319 ENSGT00940000164225 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350 #28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 ENSGT00940000155282 ENSGT00940000160335 Amniota ANCESTRAL SPECIES 6 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a #28 ENSGT00940000167249 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Mammalia ANCESTRAL SPECIES 6 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.b ##28 ENSGT00390000005727.a.b #27 ENSGT00940000167249 ENSGT00390000006350.m.a #28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 Theria ANCESTRAL SPECIES 5 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.b ##28 ENSGT00390000005727.a.b #27 ENSGT00940000167249 ENSGT00390000006350.m.a #28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 Eutheria ANCESTRAL SPECIES 10 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.b ##28 ENSGT00390000005727.a.b.a.b #27 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 Boreoeutheria ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.b.a.b ##28 ENSGT00390000005727.a.b.a.b #27 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 Euarchontoglires ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.b.b ##28 ENSGT01050000244956.b.c.a ##26 ENSGT00390000006350.m.b ##28 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 Primates ANCESTRAL SPECIES 13 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a ##26 ENSGT00390000006350.m.b ##28 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.a.b #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Strepsirrhini ANCESTRAL SPECIES 10 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a ##26 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00390000005727.a.b.a.b #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Lemuriformes ANCESTRAL SPECIES 5 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.b #26 ENSGT00390000006350.m.a.c.b.a.b ##28 ENSGT01050000244956.b.c.a ##26 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.a.b #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 Mouse lemur MODERN SPECIES 30 ENSMICG00000003372 #7 PPIL3 (ENSMICG00000003367) #8 CLK1 (ENSMICG00000003361) #9 BZW1 (ENSMICG00000003355) #10 ENSMICG00000033651 #11 ENSMICG00000027664 #12 AOX1 (ENSMICG00000005718) #13 SGO2 (ENSMICG00000033463) #14 ENSMICG00000003963 #15 SPATS2L (ENSMICG00000003956) #16 MAIP1 (ENSMICG00000044985) #17 TYW5 (ENSMICG00000046098) #18 C2orf69 (ENSMICG00000035511) #19 ENSMICG00000026608 #20 ENSMICG00000037134 #21 SATB2 (ENSMICG00000009378) #22 PLCL1 (ENSMICG00000011854) #23 BOLL (ENSMICG00000011845) #24 RFTN2 (ENSMICG00000028117) #25 ENSMICG00000037985 #26 HSPD1 (ENSMICG00000028600) #27 HSPE1 (ENSMICG00000046768) #28 COQ10B (ENSMICG00000013910) #29 SF3B1 (ENSMICG00000013879) #30 ANKRD44 (ENSMICG00000013853) #31 PGAP1 (ENSMICG00000013824) #32 C2orf66 (ENSMICG00000043136) #33 GTF3C3 (ENSMICG00000013800) #34 CCDC150 (ENSMICG00000013761) #35 HECW2 (ENSMICG00000013727) #36 STK17B (ENSMICG00000013716) #37 Lemuriformes_a ANCESTRAL SPECIES 15 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a ##26 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.a.b #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Coquerels sifaka MODERN SPECIES 94 NDUFB3 (ENSPCOG00000020529) HYCC2 (ENSPCOG00000014611) ORC2 (ENSPCOG00000021783) NIF3L1 (ENSPCOG00000018022) #7 PPIL3 (ENSPCOG00000028235) #8 CLK1 (ENSPCOG00000018180) #9 ENSPCOG00000015831 #10 ENSPCOG00000015215 #11 ENSPCOG00000027597 #12 AOX1 (ENSPCOG00000021840) #13 ENSPCOG00000024135 #14 SPATS2L (ENSPCOG00000015945) #16 MAIP1 (ENSPCOG00000008943) #17 C2orf69 (ENSPCOG00000006950) #19 FTCDNL1 (ENSPCOG00000019867) #20 ENSPCOG00000014379 #22 Greater bamboo lemur MODERN SPECIES 225 MAK (ENSPSMG00000025468) TMEM14C (ENSPSMG00000025455) C6orf52 (ENSPSMG00000025442) ENSPSMG00000025433 GCNT2 (ENSPSMG00000025432) HNRNPA1L3 (ENSPSMG00000025423) AOX1 (ENSPSMG00000025393) #13 SGO2 (ENSPSMG00000025322) #14 KCTD18 (ENSPSMG00000025316) #15 SPATS2L (ENSPSMG00000025292) #16 MAIP1 (ENSPSMG00000025245) #17 TYW5 (ENSPSMG00000025236) #18 C2orf69 (ENSPSMG00000025231) #19 FTCDNL1 (ENSPSMG00000025226) #20 SATB2 (ENSPSMG00000025213) #22 PLCL1 (ENSPSMG00000025179) #23 BOLL (ENSPSMG00000025166) #24 MARS2 (ENSPSMG00000025148) RFTN2 (ENSPSMG00000025142) #25 ENSPSMG00000025134 #26 ENSPSMG00000025114 ##28 ENSPSMG00000025102 #27 COQ10B (ENSPSMG00000025082) #29 SF3B1 (ENSPSMG00000025061) #30 ANKRD44 (ENSPSMG00000025023) #31 PGAP1 (ENSPSMG00000024985) #32 GTF3C3 (ENSPSMG00000024937) #34 CCDC150 (ENSPSMG00000024921) #35 HECW2 (ENSPSMG00000024894) #36 STK17B (ENSPSMG00000024880) #37 Bushbaby MODERN SPECIES 128 HYCC2 (ENSOGAG00000012336) ORC2 (ENSOGAG00000012329) NIF3L1 (ENSOGAG00000025311) #7 PPIL3 (ENSOGAG00000007087) #8 CLK1 (ENSOGAG00000012328) #9 BZW1 (ENSOGAG00000012326) #10 AOX2 (ENSOGAG00000025249) #11 AOX4 (ENSOGAG00000030158) #12 AOX1 (ENSOGAG00000006066) #13 SGO2 (ENSOGAG00000006064) #14 KCTD18 (ENSOGAG00000012335) #15 SPATS2L (ENSOGAG00000012331) #16 MAIP1 (ENSOGAG00000006965) #17 C2orf69 (ENSOGAG00000028317) #19 ENSOGAG00000027028 #20 SATB2 (ENSOGAG00000006949) #22 Haplorrhini ANCESTRAL SPECIES 10 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.a.b #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Simiiformes ANCESTRAL SPECIES 15 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a ##26 ENSGT00390000006350.m.a.c.a.mb #28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Catarrhini ANCESTRAL SPECIES 16 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.a.mb #28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Hominoidea ANCESTRAL SPECIES 15 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.a.mb.a.a #28 ENSGT00390000005727.a.b.a.b.c.b.a #27 ENSGT00390000006350.m.a.c.a.mb.b #28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Hominidae ANCESTRAL SPECIES 17 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.a.mb.a.a #28 ENSGT00390000005727.a.b.a.b.c.b.a #27 ENSGT00390000006350.m.a.c.a.mb.b #28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.a.mb.a.a #28 ENSGT00390000006350.m.a.c.a.mb.b #28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00940000157455.i.b ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Gorilla MODERN SPECIES 15 HYCC2 (ENSGGOG00000039554) ORC2 (ENSGGOG00000014070) NIF3L1 (ENSGGOG00000014060) #7 PPIL3 (ENSGGOG00000022268) #8 CLK1 (ENSGGOG00000016192) #9 BZW1 (ENSGGOG00000016296) #10 AOX1 (ENSGGOG00000006140) #13 SGO2 (ENSGGOG00000038921) #14 KCTD18 (ENSGGOG00000014079) #15 SPATS2L (ENSGGOG00000005917) #16 MAIP1 (ENSGGOG00000005661) #17 TYW5 (ENSGGOG00000041719) #18 C2orf69 (ENSGGOG00000005649) #19 FTCDNL1 (ENSGGOG00000040488) #20 ENSGGOG00000044011 SATB2 (ENSGGOG00000014123) #22 PLCL1 (ENSGGOG00000001959) #23 BOLL (ENSGGOG00000013594) #24 MARS2 (ENSGGOG00000034895) RFTN2 (ENSGGOG00000009318) #25 MOB4 (ENSGGOG00000036779) ##26 HSPE1 (ENSGGOG00000027944) #28 HSPD1 (ENSGGOG00000008267) #27 COQ10B (ENSGGOG00000039158) #29 SF3B1 (ENSGGOG00000009264) #30 ENSGGOG00000038007 ANKRD44 (ENSGGOG00000014558) #31 PGAP1 (ENSGGOG00000001785) #32 C2orf66 (ENSGGOG00000038009) #33 GTF3C3 (ENSGGOG00000011787) #34 CCDC150 (ENSGGOG00000010004) #35 Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.a.mb.a.a #28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00940000157455.i.b ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Human MODERN SPECIES 11 NDUFB3 (ENSG00000119013) HYCC2 (ENSG00000155744) ORC2 (ENSG00000115942) NIF3L1 (ENSG00000196290) #7 PPIL3 (ENSG00000240344) #8 CLK1 (ENSG00000013441) #9 BZW1 (ENSG00000082153) #10 AOX1 (ENSG00000138356) #13 SGO2 (ENSG00000163535) #14 KCTD18 (ENSG00000155729) #15 SPATS2L (ENSG00000196141) #16 MAIP1 (ENSG00000162972) #17 TYW5 (ENSG00000162971) #18 C2orf69 (ENSG00000178074) #19 FTCDNL1 (ENSG00000226124) #20 SATB2 (ENSG00000119042) #22 PLCL1 (ENSG00000115896) #23 BOLL (ENSG00000152430) #24 MARS2 (ENSG00000247626) RFTN2 (ENSG00000162944) #25 MOB4 (ENSG00000115540) ##26 HSPE1-MOB4 (ENSG00000270757) HSPE1 (ENSG00000115541) #28 HSPD1 (ENSG00000144381) #27 COQ10B (ENSG00000115520) #29 SF3B1 (ENSG00000115524) #30 ANKRD44 (ENSG00000065413) #31 PGAP1 (ENSG00000197121) #32 C2orf66 (ENSG00000187944) #33 GTF3C3 (ENSG00000119041) #34 CCDC150 (ENSG00000144395) #35 Pan ANCESTRAL SPECIES 12 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.a.mb.a.a #28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00940000157455.i.b ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Chimpanzee MODERN SPECIES 15 ORC2 (ENSPTRG00000012795) NIF3L1 (ENSPTRG00000012794) #7 PPIL3 (ENSPTRG00000012793) #8 CLK1 (ENSPTRG00000012792) #9 BZW1 (ENSPTRG00000012791) #10 ENSPTRG00000044647 #11 AOX1 (ENSPTRG00000012790) #13 SGO2 (ENSPTRG00000022953) #14 KCTD18 (ENSPTRG00000012787) #15 SPATS2L (ENSPTRG00000012785) #16 MAIP1 (ENSPTRG00000012784) #17 TYW5 (ENSPTRG00000012783) #18 C2orf69 (ENSPTRG00000012782) #19 FTCDNL1 (ENSPTRG00000047502) #20 ENSPTRG00000050460 SATB2 (ENSPTRG00000012779) #22 PLCL1 (ENSPTRG00000012778) #23 BOLL (ENSPTRG00000012777) #24 MARS2 (ENSPTRG00000047853) RFTN2 (ENSPTRG00000012776) #25 MOB4 (ENSPTRG00000012775) ##26 HSPE1 (ENSPTRG00000012774) #28 HSPD1 (ENSPTRG00000044665) #27 COQ10B (ENSPTRG00000012772) #29 SF3B1 (ENSPTRG00000012771) #30 ENSPTRG00000049270 ANKRD44 (ENSPTRG00000012770) #31 PGAP1 (ENSPTRG00000012769) #32 C2BH2orf66 (ENSPTRG00000012768) #33 GTF3C3 (ENSPTRG00000012767) #34 CCDC150 (ENSPTRG00000012765) #35 Bonobo MODERN SPECIES 15 ORC2 (ENSPPAG00000030211) NIF3L1 (ENSPPAG00000043491) #7 PPIL3 (ENSPPAG00000039183) #8 CLK1 (ENSPPAG00000036957) #9 BZW1 (ENSPPAG00000027971) #10 ENSPPAG00000030893 #11 AOX1 (ENSPPAG00000000241) #13 SGO2 (ENSPPAG00000000061) #14 KCTD18 (ENSPPAG00000038865) #15 SPATS2L (ENSPPAG00000036160) #16 MAIP1 (ENSPPAG00000026692) #17 TYW5 (ENSPPAG00000027150) #18 C2orf69 (ENSPPAG00000035529) #19 FTCDNL1 (ENSPPAG00000020283) #20 ENSPPAG00000039843 SATB2 (ENSPPAG00000044026) #22 PLCL1 (ENSPPAG00000042453) #23 BOLL (ENSPPAG00000033757) #24 MARS2 (ENSPPAG00000007220) RFTN2 (ENSPPAG00000026815) #25 MOB4 (ENSPPAG00000044023) ##26 ENSPPAG00000023895 ##28 HSPD1 (ENSPPAG00000038858) #27 COQ10B (ENSPPAG00000010452) #29 SF3B1 (ENSPPAG00000035007) #30 ENSPPAG00000043776 ENSPPAG00000042224 ANKRD44 (ENSPPAG00000033556) #31 PGAP1 (ENSPPAG00000039254) #32 C2orf66 (ENSPPAG00000029492) #33 GTF3C3 (ENSPPAG00000002745) #34 Orangutan MODERN SPECIES 15 NDUFB3 (ENSPPYG00000013065) HYCC2 (ENSPPYG00000029836) ORC2 (ENSPPYG00000013064) NIF3L1 (ENSPPYG00000013063) #7 ENSPPYG00000013062 CLK1 (ENSPPYG00000013061) #9 BZW1 (ENSPPYG00000035986) #10 AOX1 (ENSPPYG00000013058) #13 SGO2 (ENSPPYG00000013057) #14 KCTD18 (ENSPPYG00000030650) #15 SPATS2L (ENSPPYG00000013055) #16 MAIP1 (ENSPPYG00000035692) #17 TYW5 (ENSPPYG00000033416) #18 C2orf69 (ENSPPYG00000013054) #19 FTCDNL1 (ENSPPYG00000033061) #20 SATB2 (ENSPPYG00000013052) #22 PLCL1 (ENSPPYG00000039108) #23 BOLL (ENSPPYG00000037688) #24 MARS2 (ENSPPYG00000013049) ENSPPYG00000041557 RFTN2 (ENSPPYG00000013048) #25 MOB4 (ENSPPYG00000013047) ##26 HSPE1 (ENSPPYG00000025876) #28 HSPD1 (ENSPPYG00000013046) #27 COQ10B (ENSPPYG00000039065) #29 SF3B1 (ENSPPYG00000013044) #30 ANKRD44 (ENSPPYG00000013043) #31 PGAP1 (ENSPPYG00000013042) #32 C2orf66 (ENSPPYG00000037735) #33 GTF3C3 (ENSPPYG00000013040) #34 CCDC150 (ENSPPYG00000013039) #35 Gibbon MODERN SPECIES 14 HYCC2 (ENSNLEG00000006941) ORC2 (ENSNLEG00000006938) NIF3L1 (ENSNLEG00000006935) #7 PPIL3 (ENSNLEG00000034236) #8 CLK1 (ENSNLEG00000032526) #9 BZW1 (ENSNLEG00000006929) #10 ENSNLEG00000029066 #11 AOX1 (ENSNLEG00000006920) #13 SGO2 (ENSNLEG00000006913) #14 KCTD18 (ENSNLEG00000006912) #15 SPATS2L (ENSNLEG00000006905) #16 MAIP1 (ENSNLEG00000029234) #17 TYW5 (ENSNLEG00000031551) #18 C2orf69 (ENSNLEG00000031645) #19 FTCDNL1 (ENSNLEG00000029410) #20 SATB2 (ENSNLEG00000006893) #22 PLCL1 (ENSNLEG00000006890) #23 BOLL (ENSNLEG00000006885) #24 MARS2 (ENSNLEG00000018752) RFTN2 (ENSNLEG00000006883) #25 MOB4 (ENSNLEG00000006881) ##26 ENSNLEG00000030370 ##28 ENSNLEG00000006874 #27 ENSNLEG00000029205 COQ10B (ENSNLEG00000006871) #29 SF3B1 (ENSNLEG00000006861) #30 ANKRD44 (ENSNLEG00000006855) #31 PGAP1 (ENSNLEG00000006849) #32 C2orf66 (ENSNLEG00000006848) #33 GTF3C3 (ENSNLEG00000006837) #34 ENSNLEG00000006833 #35 Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00950000183743 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.b.a.b ##28 ENSGT00390000006350.m.a.c.a.mb #28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #31 ENSGT00390000016484 #32 Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00950000183743 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.b.a.b.a ##28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 Vervet Monkey MODERN SPECIES 1 HYCC2 (ENSCSAG00000010815) ORC2 (ENSCSAG00000010834) NIF3L1 (ENSCSAG00000010842) #7 PPIL3 (ENSCSAG00000010852) #8 CLK1 (ENSCSAG00000010924) #9 BZW1 (ENSCSAG00000010957) #10 ENSCSAG00000011187 #11 AOX1 (ENSCSAG00000011276) #13 SGO2 (ENSCSAG00000011303) #14 KCTD18 (ENSCSAG00000011318) #15 SPATS2L (ENSCSAG00000011326) #16 MAIP1 (ENSCSAG00000011334) #17 TYW5 (ENSCSAG00000011351) #18 C2orf69 (ENSCSAG00000011358) #19 FTCDNL1 (ENSCSAG00000011372) #20 SATB2 (ENSCSAG00000011380) #22 PLCL1 (ENSCSAG00000011391) #23 BOLL (ENSCSAG00000011399) #24 MARS2 (ENSCSAG00000018765) RFTN2 (ENSCSAG00000011411) #25 MOB4 (ENSCSAG00000011421) ##26 ENSCSAG00000011427 ##28 HSPD1 (ENSCSAG00000011463) #27 COQ10B (ENSCSAG00000011483) #29 SF3B1 (ENSCSAG00000011505) #30 ENSCSAG00000011517 ANKRD44 (ENSCSAG00000011536) #31 PGAP1 (ENSCSAG00000011561) #32 C2orf66 (ENSCSAG00000011573) #33 GTF3C3 (ENSCSAG00000011582) #34 CCDC150 (ENSCSAG00000011637) #35 Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00950000183743 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.b.a.b.a ##28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 Macaca ANCESTRAL SPECIES 15 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.b.a.b.a ##28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #31 ENSGT00390000016484 #32 Pig-tailed macaque MODERN SPECIES 409 NIF3L1 (ENSMNEG00000040987) #7 PPIL3 (ENSMNEG00000032202) #8 CLK1 (ENSMNEG00000031266) #9 BZW1 (ENSMNEG00000043638) #10 ENSMNEG00000045434 #11 ENSMNEG00000034841 #12 AOX1 (ENSMNEG00000024714) #13 SGO2 (ENSMNEG00000035682) #14 KCTD18 (ENSMNEG00000038609) #15 SPATS2L (ENSMNEG00000016309) #16 MAIP1 (ENSMNEG00000028494) #17 TYW5 (ENSMNEG00000030303) #18 C2orf69 (ENSMNEG00000035266) #19 FTCDNL1 (ENSMNEG00000037918) #20 ENSMNEG00000040066 SATB2 (ENSMNEG00000043012) #22 PLCL1 (ENSMNEG00000019208) #23 BOLL (ENSMNEG00000033015) #24 MARS2 (ENSMNEG00000019593) RFTN2 (ENSMNEG00000033769) #25 ENSMNEG00000033689 MOB4 (ENSMNEG00000033188) ##26 ENSMNEG00000039279 ##28 ENSMNEG00000043358 COQ10B (ENSMNEG00000032409) #29 SF3B1 (ENSMNEG00000042333) #30 ENSMNEG00000036998 ANKRD44 (ENSMNEG00000043273) #31 ENSMNEG00000045145 PGAP1 (ENSMNEG00000033082) #32 C2orf66 (ENSMNEG00000038376) #33 Macaca_a ANCESTRAL SPECIES 17 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.b.a.b.a ##28 ENSGT00390000005727.a.b.a.b.c.a.a.e #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00940000153941.a.a.h ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 Crab-eating macaque MODERN SPECIES 3 HYCC2 (ENSMFAG00000032144) ORC2 (ENSMFAG00000040620) NIF3L1 (ENSMFAG00000003012) #7 PPIL3 (ENSMFAG00000038708) #8 CLK1 (ENSMFAG00000030719) #9 BZW1 (ENSMFAG00000020809) #10 ENSMFAG00000034555 #11 AOX1 (ENSMFAG00000036889) #13 SGO2 (ENSMFAG00000041855) #14 KCTD18 (ENSMFAG00000037300) #15 SPATS2L (ENSMFAG00000003450) #16 MAIP1 (ENSMFAG00000045074) #17 TYW5 (ENSMFAG00000004016) #18 C2orf69 (ENSMFAG00000032268) #19 ENSMFAG00000038094 #20 SATB2 (ENSMFAG00000035983) #22 PLCL1 (ENSMFAG00000038838) #23 BOLL (ENSMFAG00000030962) #24 MARS2 (ENSMFAG00000012275) ENSMFAG00000003051 RFTN2 (ENSMFAG00000003082) #25 ENSMFAG00000035530 ##26 ENSMFAG00000045023 ##28 ENSMFAG00000033000 #27 COQ10B (ENSMFAG00000017910) #29 ENSMFAG00000045829 SF3B1 (ENSMFAG00000036680) #30 ENSMFAG00000057968 ENSMFAG00000057322 ANKRD44 (ENSMFAG00000032694) #31 PGAP1 (ENSMFAG00000029122) #32 Rhesus MODERN SPECIES 3 ORC2 (ENSMMUG00000014460) NIF3L1 (ENSMMUG00000006639) #7 PPIL3 (ENSMMUG00000006638) CLK1 (ENSMMUG00000006640) #9 BZW1 (ENSMMUG00000022202) #10 AOX2 (ENSMMUG00000005835) #11 AOX4 (ENSMMUG00000047974) #12 AOX1 (ENSMMUG00000021931) #13 SGO2 (ENSMMUG00000052913) #14 KCTD18 (ENSMMUG00000008102) #15 SPATS2L (ENSMMUG00000008101) #16 MAIP1 (ENSMMUG00000023168) #17 TYW5 (ENSMMUG00000023167) #18 C12H2orf69 (ENSMMUG00000041535) #19 FTCDNL1 (ENSMMUG00000031310) #20 SATB2 (ENSMMUG00000046254) #22 ENSMMUG00000059853 PLCL1 (ENSMMUG00000012822) #23 BOLL (ENSMMUG00000023811) #24 MARS2 (ENSMMUG00000023810) RFTN2 (ENSMMUG00000023809) #25 HSPE1 (ENSMMUG00000016547) ##26 HSPD1 (ENSMMUG00000010489) #27 COQ10B (ENSMMUG00000056418) #29 ENSMMUG00000058328 SF3B1 (ENSMMUG00000022430) #30 ANKRD44 (ENSMMUG00000022425) #31 PGAP1 (ENSMMUG00000043369) #32 C2H2orf66 (ENSMMUG00000054516) #33 GTF3C3 (ENSMMUG00000008643) #34 CCDC150 (ENSMMUG00000015970) #35 Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00950000183743 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.b.a.b.a ##28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00940000153941.a.a.h ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00940000157455.i.b ENSGT00950000182908.D #31 ENSGT00390000016484 #32 Olive baboon MODERN SPECIES 1 ORC2 (ENSPANG00000034347) NIF3L1 (ENSPANG00000025493) #7 ENSPANG00000009683 CLK1 (ENSPANG00000015580) #9 BZW1 (ENSPANG00000016459) #10 AOX2 (ENSPANG00000016460) #11 AOX4 (ENSPANG00000024540) #12 AOX1 (ENSPANG00000015933) #13 SGO2 (ENSPANG00000021922) #14 KCTD18 (ENSPANG00000021439) #15 SPATS2L (ENSPANG00000008482) #16 TYW5 (ENSPANG00000009235) #18 C2orf69 (ENSPANG00000040521) #19 ENSPANG00000044612 #20 ENSPANG00000031615 #20 SATB2 (ENSPANG00000011212) #22 ENSPANG00000050725 PLCL1 (ENSPANG00000000848) #23 BOLL (ENSPANG00000009570) #24 ENSPANG00000042310 MARS2 (ENSPANG00000016544) RFTN2 (ENSPANG00000009899) #25 MOB4 (ENSPANG00000016215) ##26 ENSPANG00000046137 ##28 ENSPANG00000029555 #27 COQ10B (ENSPANG00000006879) #29 ENSPANG00000037062 SF3B1 (ENSPANG00000013417) #30 ENSPANG00000016748 ENSPANG00000037191 ENSPANG00000048684 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00950000183743 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.b.a.b.a ##28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00940000153941.a.a.h ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00940000157455.i.b ENSGT00950000182908.D #31 ENSGT00390000016484 #32 Drill MODERN SPECIES 457 PPIL3 (ENSMLEG00000039054) #8 CLK1 (ENSMLEG00000029735) #9 BZW1 (ENSMLEG00000018894) #10 ENSMLEG00000016360 #11 ENSMLEG00000013006 #12 AOX1 (ENSMLEG00000039204) #13 SGO2 (ENSMLEG00000039520) #14 KCTD18 (ENSMLEG00000042319) #15 SPATS2L (ENSMLEG00000037145) #16 ENSMLEG00000036074 MAIP1 (ENSMLEG00000041626) #17 TYW5 (ENSMLEG00000038351) #18 C2orf69 (ENSMLEG00000015699) #19 FTCDNL1 (ENSMLEG00000042066) #20 ENSMLEG00000042892 SATB2 (ENSMLEG00000037435) #22 PLCL1 (ENSMLEG00000042517) #23 Sooty mangabey MODERN SPECIES 570 NIF3L1 (ENSCATG00000030966) #7 PPIL3 (ENSCATG00000031187) #8 CLK1 (ENSCATG00000030802) #9 BZW1 (ENSCATG00000032512) #10 ENSCATG00000019918 #11 ENSCATG00000042053 #12 AOX1 (ENSCATG00000033826) #13 SGO2 (ENSCATG00000027226) #14 KCTD18 (ENSCATG00000044706) #15 SPATS2L (ENSCATG00000008807) #16 MAIP1 (ENSCATG00000036858) #17 TYW5 (ENSCATG00000033078) #18 C2orf69 (ENSCATG00000031233) #19 FTCDNL1 (ENSCATG00000018934) #20 ENSCATG00000044312 SATB2 (ENSCATG00000017161) #22 PLCL1 (ENSCATG00000014153) #23 BOLL (ENSCATG00000004430) #24 MARS2 (ENSCATG00000001827) GLUD2 (ENSCATG00000044639) RFTN2 (ENSCATG00000031580) #25 MOB4 (ENSCATG00000002964) ##26 ENSCATG00000022859 ##28 HSPD1 (ENSCATG00000044175) #27 COQ10B (ENSCATG00000031857) #29 ENSCATG00000031238 SF3B1 (ENSCATG00000035735) #30 ENSCATG00000040754 ENSCATG00000039142 ANKRD44 (ENSCATG00000034086) #31 PGAP1 (ENSCATG00000041899) #32 Rhinopithecus ANCESTRAL SPECIES 83 ENSGT00940000163579 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00950000183743 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a.a ##26 ENSGT00390000006350.m.a.c.a.mb #28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367.w #29 ENSGT00390000018393 #30 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 Black snub-nosed monkey MODERN SPECIES 1955 MAIP1 (ENSRBIG00000010133) #17 TYW5 (ENSRBIG00000039190) #18 C2orf69 (ENSRBIG00000038270) #19 ENSRBIG00000040998 #20 SATB2 (ENSRBIG00000026956) #22 PLCL1 (ENSRBIG00000030591) #23 Golden snub-nosed monkey MODERN SPECIES 676 ENSRROG00000029517 CLK1 (ENSRROG00000035273) #9 BZW1 (ENSRROG00000044305) #10 ENSRROG00000043595 #11 ENSRROG00000034026 #12 AOX1 (ENSRROG00000043118) #13 SGO2 (ENSRROG00000037302) #14 KCTD18 (ENSRROG00000043788) #15 SPATS2L (ENSRROG00000041208) #16 ENSRROG00000043858 ENSRROG00000040812 #17 TYW5 (ENSRROG00000033012) #18 C2orf69 (ENSRROG00000028208) #19 FTCDNL1 (ENSRROG00000042811) #20 ENSRROG00000032256 SATB2 (ENSRROG00000044735) #22 Platyrrhini ANCESTRAL SPECIES 9 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234.c #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a ##26 ENSGT00390000006350.m.b.b ##28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Cebidae ANCESTRAL SPECIES 11 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234.c #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a ##26 ENSGT00390000006350.m.a.c.b.a.a ##28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Cebidae_a ANCESTRAL SPECIES 16 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234.c #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.c.a ##26 ENSGT00390000006350.m.a.c.b.a.a ##28 ENSGT00390000005727.a.b.a.b.c.a.a #27 ENSGT00940000155367 #29 ENSGT00950000183198.c.a.a.b ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Bolivian squirrel monkey MODERN SPECIES 56 HYCC2 (ENSSBOG00000033197) ENSSBOG00000025751 NIF3L1 (ENSSBOG00000034561) #7 ENSSBOG00000028593 CLK1 (ENSSBOG00000031614) #9 BZW1 (ENSSBOG00000020710) #10 ENSSBOG00000034034 #11 AOX1 (ENSSBOG00000032424) #13 SGO2 (ENSSBOG00000035222) #14 KCTD18 (ENSSBOG00000031520) #15 SPATS2L (ENSSBOG00000031853) #16 MAIP1 (ENSSBOG00000033061) #17 TYW5 (ENSSBOG00000020625) #18 C2orf69 (ENSSBOG00000031239) #19 FTCDNL1 (ENSSBOG00000021980) #20 SATB2 (ENSSBOG00000028702) #22 ENSSBOG00000007950 PLCL1 (ENSSBOG00000033477) #23 BOLL (ENSSBOG00000027161) #24 MARS2 (ENSSBOG00000016226) RFTN2 (ENSSBOG00000031373) #25 MOB4 (ENSSBOG00000023092) ##26 ENSSBOG00000024433 ENSSBOG00000027158 ##28 HSPD1 (ENSSBOG00000034003) #27 COQ10B (ENSSBOG00000021591) #29 ENSSBOG00000024424 SF3B1 (ENSSBOG00000020080) #30 ANKRD44 (ENSSBOG00000020670) #31 PGAP1 (ENSSBOG00000019868) #32 C2orf66 (ENSSBOG00000021609) #33 Capuchin MODERN SPECIES 178 FAM126B (ENSCCAG00000029565) ORC2 (ENSCCAG00000000270) NIF3L1 (ENSCCAG00000020100) #7 PPIL3 (ENSCCAG00000019393) #8 CLK1 (ENSCCAG00000021387) #9 BZW1 (ENSCCAG00000012616) #10 ENSCCAG00000028426 #11 AOX1 (ENSCCAG00000025414) #13 SGO2 (ENSCCAG00000032369) #14 KCTD18 (ENSCCAG00000023011) #15 SPATS2L (ENSCCAG00000033886) #16 MAIP1 (ENSCCAG00000012313) #17 TYW5 (ENSCCAG00000030363) #18 C2orf69 (ENSCCAG00000025235) #19 ENSCCAG00000027889 #20 SATB2 (ENSCCAG00000028159) #22 PLCL1 (ENSCCAG00000008545) #23 BOLL (ENSCCAG00000026623) #24 MARS2 (ENSCCAG00000019937) ENSCCAG00000037834 RFTN2 (ENSCCAG00000034642) #25 MOB4 (ENSCCAG00000026299) ##26 ENSCCAG00000018271 ##28 ENSCCAG00000028857 #27 Marmoset MODERN SPECIES 18 CLK1 (ENSCJAG00000004319) #9 BZW1 (ENSCJAG00000004267) #10 ENSCJAG00000033419 #11 AOX1 (ENSCJAG00000004230) #13 SGO2 (ENSCJAG00000004216) #14 KCTD18 (ENSCJAG00000031173) #15 ENSCJAG00000085721 SPATS2L (ENSCJAG00000004173) #16 ENSCJAG00000083755 MAIP1 (ENSCJAG00000037075) #17 TYW5 (ENSCJAG00000004155) #18 C2orf69 (ENSCJAG00000004149) #19 ENSCJAG00000044172 #20 ENSCJAG00000078875 ENSCJAG00000082819 SATB2 (ENSCJAG00000004111) #22 ENSCJAG00000055486 ENSCJAG00000085382 PLCL1 (ENSCJAG00000004100) #23 ENSCJAG00000070051 BOLL (ENSCJAG00000004092) #24 MARS2 (ENSCJAG00000022885) ENSCJAG00000077720 RFTN2 (ENSCJAG00000058836) #25 MOB4 (ENSCJAG00000045626) ##26 ENSCJAG00000084245 ENSCJAG00000041512 ##28 HSPD1 (ENSCJAG00000003990) #27 COQ10B (ENSCJAG00000039085) #29 SF3B1 (ENSCJAG00000003902) #30 ANKRD44 (ENSCJAG00000003803) #31 Mas night monkey MODERN SPECIES 492 CLK1 (ENSANAG00000027111) #9 BZW1 (ENSANAG00000021489) #10 ENSANAG00000023906 #11 AOX1 (ENSANAG00000025069) #13 SGO2 (ENSANAG00000030373) #14 KCTD18 (ENSANAG00000023292) #15 SPATS2L (ENSANAG00000029380) #16 MAIP1 (ENSANAG00000031625) #17 TYW5 (ENSANAG00000024108) #18 C2orf69 (ENSANAG00000022030) #19 ENSANAG00000023820 #20 SATB2 (ENSANAG00000024206) #22 PLCL1 (ENSANAG00000022909) #23 BOLL (ENSANAG00000031449) #24 ENSANAG00000027174 Tarsier MODERN SPECIES 4981 SATB2 (ENSTSYG00000002539) #22 LYG2 (ENSTSYG00000028650) ENSTSYG00000029768 TXNDC9 (ENSTSYG00000033216) EIF5B (ENSTSYG00000011850) REV1 (ENSTSYG00000011917) AFF3 (ENSTSYG00000029683) Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Tree shrew MODERN SPECIES 795 SATB2 (ENSTBEG00000002443) #22 Glires ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Lagomorpha ANCESTRAL SPECIES 13 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.a.b #27 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Rabbit MODERN SPECIES 18 PPIL3 (ENSOCUG00000010661) #8 CLK1 (ENSOCUG00000010653) #9 ENSOCUG00000010647 #10 ENSOCUG00000026480 #11 ENSOCUG00000024593 #12 ENSOCUG00000035654 #12 AOX1 (ENSOCUG00000013971) #13 ENSOCUG00000000547 #14 ENSOCUG00000037416 #14 KCTD18 (ENSOCUG00000011556) #15 SPATS2L (ENSOCUG00000011549) #16 ENSOCUG00000017946 #17 ENSOCUG00000035705 #18 ENSOCUG00000016464 #18 C2orf69 (ENSOCUG00000016473) #19 SATB2 (ENSOCUG00000009700) #22 PLCL1 (ENSOCUG00000013978) #23 BOLL (ENSOCUG00000013979) #24 MARS2 (ENSOCUG00000017798) RFTN2 (ENSOCUG00000003993) #25 ENSOCUG00000005712 ##26 HSPE1 (ENSOCUG00000010360) #28 HSPD1 (ENSOCUG00000012736) #27 COQ10B (ENSOCUG00000012735) #29 ENSOCUG00000000205 ENSOCUG00000029492 #30 ENSOCUG00000012722 #30 ANKRD44 (ENSOCUG00000009183) #31 PGAP1 (ENSOCUG00000002192) #32 C2orf66 (ENSOCUG00000028999) #33 GTF3C3 (ENSOCUG00000000463) #34 Pika MODERN SPECIES 573 MAIP1 (ENSOPRG00000004142) #17 TYW5 (ENSOPRG00000004133) #18 C2orf69 (ENSOPRG00000004115) #19 SATB2 (ENSOPRG00000003979) #22 Rodentia ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Rodentia_B ANCESTRAL SPECIES 12 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Kangaroo rat MODERN SPECIES 320 ENSDORG00000024018 Hycc2 (ENSDORG00000029531) Orc2 (ENSDORG00000007391) Nif3l1 (ENSDORG00000007390) #7 Ppil3 (ENSDORG00000007389) #8 Clk1 (ENSDORG00000007388) #9 Bzw1 (ENSDORG00000029865) #10 Aox2 (ENSDORG00000026718) #11 Aox4 (ENSDORG00000026668) #12 Aox3 (ENSDORG00000025305) #12 Aox1 (ENSDORG00000004358) #13 Kctd18 (ENSDORG00000007817) #15 Spats2l (ENSDORG00000007816) #16 Maip1 (ENSDORG00000012569) #17 Tyw5 (ENSDORG00000012567) #18 Satb2 (ENSDORG00000001292) #22 Plcl1 (ENSDORG00000000485) #23 Boll (ENSDORG00000010791) #24 Mars2 (ENSDORG00000010789) Rftn2 (ENSDORG00000008999) #25 Mob4 (ENSDORG00000023241) ##26 ENSDORG00000011071 ##28 Hspd1 (ENSDORG00000011069) #27 Coq10b (ENSDORG00000025804) #29 Sf3b1 (ENSDORG00000002399) #30 ENSDORG00000029693 #31 ENSDORG00000024945 Pgap1 (ENSDORG00000000406) #32 Gtf3c3 (ENSDORG00000000403) #34 Hecw2 (ENSDORG00000014759) #36 Stk17b (ENSDORG00000029601) #37 Myomorpha ANCESTRAL SPECIES 10 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Lesser Egyptian jerboa MODERN SPECIES 52 ENSJJAG00000013473 Clk1 (ENSJJAG00000024354) #9 Bzw1 (ENSJJAG00000022065) #10 Aox2 (ENSJJAG00000011668) #11 Aox4 (ENSJJAG00000017799) #12 Aox1 (ENSJJAG00000019598) #13 ENSJJAG00000015058 #14 Kctd18 (ENSJJAG00000016069) #15 Spats2l (ENSJJAG00000019268) #16 ENSJJAG00000010933 ENSJJAG00000012063 Maip1 (ENSJJAG00000023816) #17 Tyw5 (ENSJJAG00000019361) #18 1700066M21Rik (ENSJJAG00000019976) #19 ENSJJAG00000023987 Satb2 (ENSJJAG00000019883) #22 ENSJJAG00000012932 Plcl1 (ENSJJAG00000024297) #23 Boll (ENSJJAG00000015508) #24 Mars2 (ENSJJAG00000023940) Rftn2 (ENSJJAG00000002223) #25 ENSJJAG00000009865 ##26 ENSJJAG00000012025 #28 ENSJJAG00000016713 ##27 Coq10b (ENSJJAG00000020646) #29 Sf3b1 (ENSJJAG00000010903) #30 ENSJJAG00000018305 Ankrd44 (ENSJJAG00000016107) #31 Pgap1 (ENSJJAG00000009924) #32 Gtf3c3 (ENSJJAG00000004649) #34 Hecw2 (ENSJJAG00000022806) #36 Muroidea ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Upper Galilee mountains blind mole rat MODERN SPECIES 417 ENSNGAG00000023509 ENSNGAG00000022183 #7 Ppil3 (ENSNGAG00000014999) #8 ENSNGAG00000010384 #9 Bzw1 (ENSNGAG00000014200) #10 Aox2 (ENSNGAG00000021935) #11 Aox4 (ENSNGAG00000001220) #12 Aox3 (ENSNGAG00000019159) #12 Aox1 (ENSNGAG00000018103) #13 ENSNGAG00000017175 #14 Kctd18 (ENSNGAG00000011886) #15 Spats2l (ENSNGAG00000009131) #16 Maip1 (ENSNGAG00000013388) #17 Tyw5 (ENSNGAG00000022701) #18 1700066M21Rik (ENSNGAG00000015731) #19 Satb2 (ENSNGAG00000023604) #22 Plcl1 (ENSNGAG00000017912) #23 ENSNGAG00000014596 #24 Muroidea_A ANCESTRAL SPECIES 19 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Murinae ANCESTRAL SPECIES 9 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Mus ANCESTRAL SPECIES 5 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b.m.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Mus_A ANCESTRAL SPECIES 5 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b.m.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493.c #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a.y.b #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929.b #34 Mus_B ANCESTRAL SPECIES 7 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b.p #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b.m.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493.c #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a.y.b.a.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929.b #34 Mus_C ANCESTRAL SPECIES 1 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b.p #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b.m.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493.c #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a.y.b.a.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929.b #34 ENSGT00390000005285 #35 spretus MODERN SPECIES Hycc2 (MGP_SPRETEiJ_G0014973) Orc2 (MGP_SPRETEiJ_G0014972) Nif3l1 (MGP_SPRETEiJ_G0014971) #7 Ppil3 (MGP_SPRETEiJ_G0014970) #8 Clk1 (MGP_SPRETEiJ_G0014969) #9 Bzw1 (MGP_SPRETEiJ_G0014968) #10 Aox2 (MGP_SPRETEiJ_G0014967) #11 Aox4 (MGP_SPRETEiJ_G0014966) #12 Aox3 (MGP_SPRETEiJ_G0014965) #12 Aox1 (MGP_SPRETEiJ_G0014964) #13 Sgo2a (MGP_SPRETEiJ_G0014963) #14 Kctd18 (MGP_SPRETEiJ_G0014962) #15 Spats2l (MGP_SPRETEiJ_G0014961) #16 Maip1 (MGP_SPRETEiJ_G0014960) #17 Tyw5 (MGP_SPRETEiJ_G0014959) #18 Satb2 (MGP_SPRETEiJ_G0014957) #22 Hsfy2 (MGP_SPRETEiJ_G0014956) Plcl1 (MGP_SPRETEiJ_G0014955) #23 MGP_SPRETEiJ_G0014954 #24 Mars2 (MGP_SPRETEiJ_G0014953) Rftn2 (MGP_SPRETEiJ_G0014952) #25 Mob4 (MGP_SPRETEiJ_G0014951) ##26 MGP_SPRETEiJ_G0014950 #28 MGP_SPRETEiJ_G0014949 ##27 MGP_SPRETEiJ_G0014948 #29 Sf3b1 (MGP_SPRETEiJ_G0014947) #30 Ankrd44 (MGP_SPRETEiJ_G0014946) #31 MGP_SPRETEiJ_G0014945 #32 Gtf3c3 (MGP_SPRETEiJ_G0014944) #34 Ccdc150 (MGP_SPRETEiJ_G0014943) #35 Hecw2 (MGP_SPRETEiJ_G0014942) #36 Steppe mouse MODERN SPECIES 84 Maip1 (ENSMSIG00000012877) #17 Tyw5 (ENSMSIG00000012899) #18 1700066M21Rik (ENSMSIG00000012910) #19 Satb2 (ENSMSIG00000012940) #22 Hsfy2 (ENSMSIG00000013021) Mouse MODERN SPECIES Orc2 (ENSMUSG00000026037) Nif3l1 (ENSMUSG00000026036) #7 Ppil3 (ENSMUSG00000026035) #8 Clk1 (ENSMUSG00000026034) #9 Bzw1 (ENSMUSG00000051223) #10 Aox2 (ENSMUSG00000079554) #11 Aox4 (ENSMUSG00000038242) #12 Aox3 (ENSMUSG00000064294) #12 Aox1 (ENSMUSG00000063558) #13 Sgo2a (ENSMUSG00000026039) #14 Kctd18 (ENSMUSG00000054770) #15 Spats2l (ENSMUSG00000038305) #16 Maip1 (ENSMUSG00000025971) #17 Tyw5 (ENSMUSG00000048495) #18 1700066M21Rik (ENSMUSG00000038323) #19 Satb2 (ENSMUSG00000038331) #22 Hsfy2 (ENSMUSG00000045336) Plcl1 (ENSMUSG00000038349) #23 Boll (ENSMUSG00000025977) #24 Mars2 (ENSMUSG00000046994) Rftn2 (ENSMUSG00000025978) #25 Mob4 (ENSMUSG00000025979) ##26 Hspe1 (ENSMUSG00000073676) #28 Hspd1 (ENSMUSG00000025980) ##27 Coq10b (ENSMUSG00000025981) #29 Sf3b1 (ENSMUSG00000025982) #30 Ankrd44 (ENSMUSG00000052331) #31 Pgap1 (ENSMUSG00000073678) #32 Gm34066 (ENSMUSG00000109809) #33 Gtf3c3 (ENSMUSG00000041303) #34 Ccdc150 (ENSMUSG00000025983) #35 Ryukyu mouse MODERN SPECIES Nif3l1 (MGP_CAROLIEiJ_G0014165) #7 Ppil3 (MGP_CAROLIEiJ_G0014164) #8 Clk1 (MGP_CAROLIEiJ_G0014163) #9 Bzw1 (MGP_CAROLIEiJ_G0014162) #10 Aox2 (MGP_CAROLIEiJ_G0014161) #11 Aox4 (MGP_CAROLIEiJ_G0014160) #12 Aox3 (MGP_CAROLIEiJ_G0014159) #12 Aox1 (MGP_CAROLIEiJ_G0014158) #13 MGP_CAROLIEiJ_G0014157 #14 MGP_CAROLIEiJ_G0014156 #14 Kctd18 (MGP_CAROLIEiJ_G0014155) #15 Spats2l (MGP_CAROLIEiJ_G0014154) #16 Maip1 (MGP_CAROLIEiJ_G0014153) #17 Tyw5 (MGP_CAROLIEiJ_G0014152) #18 1700066M21Rik (MGP_CAROLIEiJ_G0014151) #19 Satb2 (MGP_CAROLIEiJ_G0014150) #22 Hsfy2 (MGP_CAROLIEiJ_G0014149) Plcl1 (MGP_CAROLIEiJ_G0014148) #23 Mars2 (MGP_CAROLIEiJ_G0014147) Rftn2 (MGP_CAROLIEiJ_G0014146) #25 Mob4 (MGP_CAROLIEiJ_G0014145) ##26 MGP_CAROLIEiJ_G0014144 #28 Hspd1 (MGP_CAROLIEiJ_G0014143) ##27 Coq10b (MGP_CAROLIEiJ_G0014142) #29 Sf3b1 (MGP_CAROLIEiJ_G0014141) #30 Ankrd44 (MGP_CAROLIEiJ_G0014140) #31 Pgap1 (MGP_CAROLIEiJ_G0014139) #32 MGP_CAROLIEiJ_G0014138 #34 Ccdc150 (MGP_CAROLIEiJ_G0014137) #35 Hecw2 (MGP_CAROLIEiJ_G0014136) #36 Stk17b (MGP_CAROLIEiJ_G0014135) #37 Shrew mouse MODERN SPECIES 18 Hycc2 (MGP_PahariEiJ_G0027405) Orc2 (MGP_PahariEiJ_G0027404) Nif3l1 (MGP_PahariEiJ_G0027403) #7 Ppil3 (MGP_PahariEiJ_G0027402) #8 Clk1 (MGP_PahariEiJ_G0027401) #9 Bzw1 (MGP_PahariEiJ_G0027400) #10 Aox4 (MGP_PahariEiJ_G0027399) #12 Aox3 (MGP_PahariEiJ_G0027398) #12 Aox1 (MGP_PahariEiJ_G0027397) #13 Sgo2a (MGP_PahariEiJ_G0027396) #14 Kctd18 (MGP_PahariEiJ_G0027395) #15 Spats2l (MGP_PahariEiJ_G0027394) #16 Maip1 (MGP_PahariEiJ_G0027393) #17 Tyw5 (MGP_PahariEiJ_G0027392) #18 1700066M21Rik (MGP_PahariEiJ_G0027391) #19 Satb2 (MGP_PahariEiJ_G0027390) #22 Hsfy2 (MGP_PahariEiJ_G0027389) Plcl1 (MGP_PahariEiJ_G0027388) #23 Boll (MGP_PahariEiJ_G0027387) #24 Mars2 (MGP_PahariEiJ_G0027386) Rftn2 (MGP_PahariEiJ_G0027385) #25 MGP_PahariEiJ_G0027384 ##26 MGP_PahariEiJ_G0027383 #28 MGP_PahariEiJ_G0027382 ##27 Coq10b (MGP_PahariEiJ_G0027381) #29 Ankrd44 (MGP_PahariEiJ_G0027379) #31 Pgap1 (MGP_PahariEiJ_G0027378) #32 Gtf3c3 (MGP_PahariEiJ_G0027377) #34 Ccdc150 (MGP_PahariEiJ_G0027376) #35 Hecw2 (MGP_PahariEiJ_G0027375) #36 Stk17b (MGP_PahariEiJ_G0027374) #37 Rat MODERN SPECIES 19 Orc2 (ENSRNOG00000012558) Nif3l1 (ENSRNOG00000013446) #7 Ppil3 (ENSRNOG00000013636) Clk1 (ENSRNOG00000025768) #9 Bzw1 (ENSRNOG00000013977) #10 Aox2 (ENSRNOG00000033923) #11 ENSRNOG00000068995 Aox3 (ENSRNOG00000014555) #12 Aox1 (ENSRNOG00000015354) #13 Sgo2 (ENSRNOG00000027035) #14 Kctd18 (ENSRNOG00000027091) #15 Spats2l (ENSRNOG00000016012) #16 Maip1 (ENSRNOG00000015983) #17 Tyw5 (ENSRNOG00000010100) #18 RGD1306941 (ENSRNOG00000010185) #19 Satb2 (ENSRNOG00000010188) #22 Hsfy2 (ENSRNOG00000038569) Plcl1 (ENSRNOG00000032659) #23 Boll (ENSRNOG00000054379) #24 Mars2 (ENSRNOG00000065339) AABR07067762.1 (ENSRNOG00000055383) Rftn2 (ENSRNOG00000015594) #25 Mob4 (ENSRNOG00000014980) ##26 Hspe1 (ENSRNOG00000051624) #28 Hspd1 (ENSRNOG00000014525) ##27 Coq10b (ENSRNOG00000014456) #29 Sf3b1 (ENSRNOG00000013516) #30 Tmem258b (ENSRNOG00000032740) Ankrd44 (ENSRNOG00000021384) #31 Pgap1 (ENSRNOG00000013388) #32 LOC686030 (ENSRNOG00000067303) #33 Cricetidae ANCESTRAL SPECIES 19 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b.w.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Cricetinae ANCESTRAL SPECIES 3 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.b ##28 ENSGT00390000005727.a.b.b.w.a ##27 ENSGT00390000005727.a.b.b.w.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Chinese hamster chok1gshd MODERN SPECIES 1 Orc2 (ENSCGRG00001016911) ENSCGRG00001018137 #7 Ppil3 (ENSCGRG00001021470) #8 Clk1 (ENSCGRG00001018410) #9 Bzw1 (ENSCGRG00001017178) #10 Aox2 (ENSCGRG00001017735) #11 Aox4 (ENSCGRG00001016089) #12 Aox3 (ENSCGRG00001016559) #12 Aox1 (ENSCGRG00001018485) #13 ENSCGRG00001016045 #14 Kctd18 (ENSCGRG00001016666) #15 Spats2l (ENSCGRG00001019123) #16 Maip1 (ENSCGRG00001018639) #17 Tyw5 (ENSCGRG00001015297) #18 1700066M21Rik (ENSCGRG00001016585) #19 Satb2 (ENSCGRG00001019669) #22 Hsfy2 (ENSCGRG00001009926) ENSCGRG00001010393 Plcl1 (ENSCGRG00001015676) #23 ENSCGRG00001009537 Boll (ENSCGRG00001020168) #24 Mars2 (ENSCGRG00001010364) Rftn2 (ENSCGRG00001017788) #25 Mob4 (ENSCGRG00001024203) ##26 ENSCGRG00001015345 ##28 HSPD1 (ENSCGRG00001021126) ##27 Coq10b (ENSCGRG00001015271) #29 Sf3b1 (ENSCGRG00001016990) #30 Ankrd44 (ENSCGRG00001018584) #31 Pgap1 (ENSCGRG00001016707) #32 Gtf3c3 (ENSCGRG00001014543) #34 Golden Hamster MODERN SPECIES 723 Aox1 (ENSMAUG00000014270) #13 ENSMAUG00000000248 #14 Kctd18 (ENSMAUG00000019856) #15 Spats2l (ENSMAUG00000016921) #16 Maip1 (ENSMAUG00000007424) #17 Tyw5 (ENSMAUG00000009449) #18 1700066M21Rik (ENSMAUG00000017438) #19 Satb2 (ENSMAUG00000008545) #22 Plcl1 (ENSMAUG00000003415) #23 Boll (ENSMAUG00000008224) #24 Mars2 (ENSMAUG00000017224) Rftn2 (ENSMAUG00000014348) #25 ENSMAUG00000007042 ##26 ENSMAUG00000017789 ##27 Coq10b (ENSMAUG00000010644) #29 Sf3b1 (ENSMAUG00000009071) #30 Ankrd44 (ENSMAUG00000019633) #31 Pgap1 (ENSMAUG00000018155) #32 Gtf3c3 (ENSMAUG00000018770) #34 Ccdc150 (ENSMAUG00000015624) #35 Hecw2 (ENSMAUG00000011882) #36 Stk17b (ENSMAUG00000018862) #37 ENSMAUG00000020218 Cricetidae_B ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT00390000006350.m.a.c.a.`b #28 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a.ab #28 ENSGT00390000005727.a.b.b.w.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 Prairie vole MODERN SPECIES 91 Hycc2 (ENSMOCG00000012367) Orc2 (ENSMOCG00000016158) Nif3l1 (ENSMOCG00000012327) #7 ENSMOCG00000013096 #8 ENSMOCG00000005608 #9 Bzw1 (ENSMOCG00000008375) #10 Aox2 (ENSMOCG00000018237) #11 Aox4 (ENSMOCG00000015766) #12 Aox1 (ENSMOCG00000001195) #13 ENSMOCG00000012099 #14 Kctd18 (ENSMOCG00000018835) #15 Spats2l (ENSMOCG00000006136) #16 Maip1 (ENSMOCG00000008182) #17 Tyw5 (ENSMOCG00000018540) #18 1700066M21Rik (ENSMOCG00000018970) #19 ENSMOCG00000005756 #22 Hsfy2 (ENSMOCG00000013974) Plcl1 (ENSMOCG00000014862) #23 Boll (ENSMOCG00000022824) #24 Mars2 (ENSMOCG00000006676) Rftn2 (ENSMOCG00000020060) #25 ENSMOCG00000000253 #28 Mob4 (ENSMOCG00000020652) ##26 ENSMOCG00000002787 ##27 Coq10b (ENSMOCG00000012636) #29 Sf3b1 (ENSMOCG00000000455) #30 ENSMOCG00000021330 #31 Pgap1 (ENSMOCG00000013936) #32 Gtf3c3 (ENSMOCG00000019654) #34 Ccdc150 (ENSMOCG00000001399) #35 Hecw2 (ENSMOCG00000012140) #36 Northern American deer mouse MODERN SPECIES 4 Hycc2 (ENSPEMG00000014604) Orc2 (ENSPEMG00000010035) Nif3l1 (ENSPEMG00000023040) #7 Ppil3 (ENSPEMG00000011585) #8 Clk1 (ENSPEMG00000022508) #9 ENSPEMG00000013940 #10 Aox2 (ENSPEMG00000022861) #11 ENSPEMG00000027085 #12 Aox1 (ENSPEMG00000000656) #13 ENSPEMG00000020091 #14 Kctd18 (ENSPEMG00000028635) #15 Spats2l (ENSPEMG00000020003) #16 Maip1 (ENSPEMG00000015287) #17 Tyw5 (ENSPEMG00000009506) #18 1700066M21Rik (ENSPEMG00000001657) #19 Satb2 (ENSPEMG00000013811) #22 Hsfy2 (ENSPEMG00000029057) Plcl1 (ENSPEMG00000001849) #23 ENSPEMG00000024520 Boll (ENSPEMG00000018168) #24 Mars2 (ENSPEMG00000008377) Rftn2 (ENSPEMG00000000048) #25 Mob4 (ENSPEMG00000017361) ##26 ENSPEMG00000029712 ENSPEMG00000010504 #28 Hspd1 (ENSPEMG00000015411) ##27 Coq10b (ENSPEMG00000005817) #29 Sf3b1 (ENSPEMG00000010699) #30 Ankrd44 (ENSPEMG00000016873) #31 Pgap1 (ENSPEMG00000008939) #32 ENSPEMG00000024521 Rodentia_A ANCESTRAL SPECIES 13 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00390000006350.m.a.c.b.b ##28 ENSGT00390000005727.a.b.a.b #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Sciuridae ANCESTRAL SPECIES 10 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00390000005727.a.b.a.b #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 Marmotini ANCESTRAL SPECIES 2 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b.v #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000012178.g.a.a ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a.v #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 ENSGT00940000155466 #36 Marmotini_b ANCESTRAL SPECIES 91 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000012178.g.a.a ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.a.v #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 ENSGT00940000155466 #36 Squirrel MODERN SPECIES 106 SATB2 (ENSSTOG00000024964) #22 PLCL1 (ENSSTOG00000026164) #23 BOLL (ENSSTOG00000003536) #24 MARS2 (ENSSTOG00000015451) RFTN2 (ENSSTOG00000015446) #25 MOB4 (ENSSTOG00000021024) ##26 ENSSTOG00000031333 #28 ENSSTOG00000028470 ##27 COQ10B (ENSSTOG00000011048) #29 SF3B1 (ENSSTOG00000011034) #30 ANKRD44 (ENSSTOG00000012130) #31 PGAP1 (ENSSTOG00000010633) #32 GTF3C3 (ENSSTOG00000011894) #34 ENSSTOG00000014552 #35 HECW2 (ENSSTOG00000015188) #36 STK17B (ENSSTOG00000020599) #37 Arctic ground squirrel MODERN SPECIES 210 ENSUPAG00010015923 #12 AOX1 (ENSUPAG00010015861) #13 SGO2 (ENSUPAG00010015843) #14 KCTD18 (ENSUPAG00010015819) #15 SPATS2L (ENSUPAG00010015777) #16 MAIP1 (ENSUPAG00010015760) #17 TYW5 (ENSUPAG00010015739) #18 C2orf69 (ENSUPAG00010015730) #19 FTCDNL1 (ENSUPAG00010015721) #20 ENSUPAG00010015718 SATB2 (ENSUPAG00010015643) #22 PLCL1 (ENSUPAG00010015612) #23 BOLL (ENSUPAG00010015589) #24 MARS2 (ENSUPAG00010015585) RFTN2 (ENSUPAG00010015580) #25 ENSUPAG00010015569 ##28 ENSUPAG00010015563 ##27 COQ10B (ENSUPAG00010015540) #29 SF3B1 (ENSUPAG00010015518) #30 Alpin marmot MODERN SPECIES 8 PPIL3 (ENSMMMG00000012069) #8 CLK1 (ENSMMMG00000012051) #9 ENSMMMG00000012026 #10 ENSMMMG00000011976 #11 ENSMMMG00000011959 ENSMMMG00000011912 #12 AOX1 (ENSMMMG00000011886) #13 ENSMMMG00000011877 #14 KCTD18 (ENSMMMG00000011839) #15 SPATS2L (ENSMMMG00000011689) #16 MAIP1 (ENSMMMG00000011679) #17 TYW5 (ENSMMMG00000011668) #18 C2orf69 (ENSMMMG00000011660) #19 FTCDNL1 (ENSMMMG00000011655) #20 ENSMMMG00000011650 SATB2 (ENSMMMG00000011551) #22 ENSMMMG00000011481 PLCL1 (ENSMMMG00000011429) #23 BOLL (ENSMMMG00000011354) #24 MARS2 (ENSMMMG00000011347) RFTN2 (ENSMMMG00000011220) #25 ENSMMMG00000011174 ##26 ENSMMMG00000011161 #28 ENSMMMG00000011138 #27 ENSMMMG00000011101 #29 SF3B1 (ENSMMMG00000011081) #30 ANKRD44 (ENSMMMG00000010980) #31 PGAP1 (ENSMMMG00000010912) #32 GTF3C3 (ENSMMMG00000010874) #34 ENSMMMG00000010858 #35 ENSMMMG00000010842 Eurasian red squirrel MODERN SPECIES 12 NIF3L1 (ENSSVLG00005004091) #7 PPIL3 (ENSSVLG00005004070) #8 CLK1 (ENSSVLG00005004020) #9 BZW1 (ENSSVLG00005003945) #10 ENSSVLG00005003845 #11 ENSSVLG00005003767 #12 AOX1 (ENSSVLG00005003683) #13 SGO2 (ENSSVLG00005003633) #14 ENSSVLG00005003604 #15 SPATS2L (ENSSVLG00005003512) #16 MAIP1 (ENSSVLG00005003433) #17 TYW5 (ENSSVLG00005003405) #18 C2orf69 (ENSSVLG00005003387) #19 FTCDNL1 (ENSSVLG00005003343) #20 ENSSVLG00005003317 SATB2 (ENSSVLG00005003278) #22 PLCL1 (ENSSVLG00005003227) #23 ENSSVLG00005003207 BOLL (ENSSVLG00005003123) #24 MARS2 (ENSSVLG00005003085) RFTN2 (ENSSVLG00005003057) #25 MOB4 (ENSSVLG00005002989) ##26 HSPE1 (ENSSVLG00005002940) #28 ENSSVLG00005002895 #27 ENSSVLG00005002862 #29 SF3B1 (ENSSVLG00005002801) #30 ANKRD44 (ENSSVLG00005002705) #31 PGAP1 (ENSSVLG00005002564) #32 C2orf66 (ENSSVLG00005002524) #33 ENSSVLG00005002519 GTF3C3 (ENSSVLG00005002487) #34 Hystricomorpha ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.b.b ##28 ENSGT00390000005727.a.b.a.b #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 ENSGT00940000155466 #36 Hystricomorpha_a ANCESTRAL SPECIES 17 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.b.b ##28 ENSGT00390000005727.a.b.a.b #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 ENSGT00940000155466 #36 Hystricomorpha_b ANCESTRAL SPECIES 24 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.d ##26 ENSGT00390000006350.m.a.c.b.b.a.b ##28 ENSGT00390000005727.a.b.a.b #27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 Degu MODERN SPECIES 66 ENSODEG00000007860 ORC2 (ENSODEG00000008853) NIF3L1 (ENSODEG00000008894) #7 PPIL3 (ENSODEG00000007592) #8 CLK1 (ENSODEG00000009021) #9 ENSODEG00000019563 ENSODEG00000008411 #10 ENSODEG00000008135 #11 ENSODEG00000011138 #12 AOX1 (ENSODEG00000012914) #13 ENSODEG00000009211 #15 SPATS2L (ENSODEG00000009851) #16 MAIP1 (ENSODEG00000008914) #17 TYW5 (ENSODEG00000009836) #18 C2orf69 (ENSODEG00000008700) #19 SATB2 (ENSODEG00000008383) #22 PLCL1 (ENSODEG00000008918) #23 BOLL (ENSODEG00000008471) #24 RFTN2 (ENSODEG00000008704) #25 MOB4 (ENSODEG00000009609) ##26 ENSODEG00000019874 ENSODEG00000011397 ##28 ENSODEG00000009026 #27 COQ10B (ENSODEG00000008396) #29 ENSODEG00000011153 #30 ENSODEG00000019820 ENSODEG00000008898 #31 ENSODEG00000008698 ENSODEG00000009525 PGAP1 (ENSODEG00000009932) #32 ENSODEG00000009843 #34 Long-tailed chinchilla MODERN SPECIES 110 HYCC2 (ENSCLAG00000011177) ORC2 (ENSCLAG00000013209) NIF3L1 (ENSCLAG00000013524) #7 PPIL3 (ENSCLAG00000014050) #8 CLK1 (ENSCLAG00000011455) #9 BZW1 (ENSCLAG00000012079) #10 ENSCLAG00000011199 #11 ENSCLAG00000014402 #12 AOX1 (ENSCLAG00000011481) #13 ENSCLAG00000012456 #14 ENSCLAG00000014377 #15 SPATS2L (ENSCLAG00000013167) #16 MAIP1 (ENSCLAG00000011913) #17 TYW5 (ENSCLAG00000012009) #18 C2orf69 (ENSCLAG00000012813) #19 SATB2 (ENSCLAG00000016994) #22 PLCL1 (ENSCLAG00000016098) #23 BOLL (ENSCLAG00000017375) #24 MARS2 (ENSCLAG00000010386) RFTN2 (ENSCLAG00000009821) #25 MOB4 (ENSCLAG00000010086) ##26 ENSCLAG00000010686 ##28 HSPD1 (ENSCLAG00000011541) #27 COQ10B (ENSCLAG00000017377) #29 SF3B1 (ENSCLAG00000014767) #30 ANKRD44 (ENSCLAG00000015396) #31 PGAP1 (ENSCLAG00000011838) #32 GTF3C3 (ENSCLAG00000009827) #34 CCDC150 (ENSCLAG00000012365) #35 HECW2 (ENSCLAG00000011628) #36 STK17B (ENSCLAG00000012520) #37 Guinea pig MODERN SPECIES 104 HYCC2 (ENSCPOG00000010108) ORC2 (ENSCPOG00000004552) NIF3L1 (ENSCPOG00000008572) #7 PPIL3 (ENSCPOG00000008570) #8 CLK1 (ENSCPOG00000027067) #9 ENSCPOG00000010449 #10 ENSCPOG00000019962 #11 ENSCPOG00000033032 #12 Aox1 (ENSCPOG00000025955) #13 ENSCPOG00000002722 #14 ENSCPOG00000012077 #15 SPATS2L (ENSCPOG00000003190) #16 MAIP1 (ENSCPOG00000003800) #17 TYW5 (ENSCPOG00000035856) #18 C2orf69 (ENSCPOG00000009934) #19 SATB2 (ENSCPOG00000015198) #22 PLCL1 (ENSCPOG00000011478) #23 BOLL (ENSCPOG00000000390) #24 MARS2 (ENSCPOG00000025973) RFTN2 (ENSCPOG00000010463) #25 MOB4 (ENSCPOG00000012746) ##26 ENSCPOG00000027474 ##28 HSPD1 (ENSCPOG00000002588) #27 COQ10B (ENSCPOG00000002673) #29 SF3B1 (ENSCPOG00000009353) #30 ANKRD44 (ENSCPOG00000026494) #31 PGAP1 (ENSCPOG00000003177) #32 GTF3C3 (ENSCPOG00000006643) #34 CCDC150 (ENSCPOG00000031267) #35 ENSCPOG00000040067 HECW2 (ENSCPOG00000008908) #36 Naked mole-rat female MODERN SPECIES 22 PPIL3 (ENSHGLG00000035729) #8 Clk1 (ENSHGLG00000011322) #9 BZW1 (ENSHGLG00000011961) #10 ENSHGLG00000012205 #11 Aox4 (ENSHGLG00000012471) #12 AOX1 (ENSHGLG00000012876) #13 SGO2 (ENSHGLG00000015359) #14 ENSHGLG00000047532 ENSHGLG00000015370 #15 SPATS2L (ENSHGLG00000015420) #16 ENSHGLG00000017615 ##37 MAIP1 (ENSHGLG00000017548) #17 TYW5 (ENSHGLG00000017557) #18 C2orf69 (ENSHGLG00000040936) #19 ENSHGLG00000020697 SATB2 (ENSHGLG00000015892) #22 ENSHGLG00000043283 PLCL1 (ENSHGLG00000015970) #23 BOLL (ENSHGLG00000017562) #24 MARS2 (ENSHGLG00000049320) RFTN2 (ENSHGLG00000017636) #25 MOB4 (ENSHGLG00000050196) ##26 ENSHGLG00000042669 ##28 HSPD1 (ENSHGLG00000007927) #27 ENSHGLG00000038699 #29 ENSHGLG00000008285 #30 ANKRD44 (ENSHGLG00000008625) #31 ENSHGLG00000049153 ENSHGLG00000040344 ENSHGLG00000008965 #32 ENSHGLG00000042696 Laurasiatheria ANCESTRAL SPECIES 12 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000008096.B #22 Common shrew MODERN SPECIES 1424 SATB2 (ENSSARG00000014343) #22 Hedgehog MODERN SPECIES 2008 SATB2 (ENSEEUG00000014569) #22 Laurasiatheria_a ANCESTRAL SPECIES 16 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Artiodactyla ANCESTRAL SPECIES 13 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Suina ANCESTRAL SPECIES 3 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.b.a.b ##28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Pig MODERN SPECIES 6 ORC2 (ENSSSCG00000016098) NIF3L1 (ENSSSCG00000039654) #7 PPIL3 (ENSSSCG00000016096) #8 CLK1 (ENSSSCG00000016095) #9 BZW1 (ENSSSCG00000016094) #10 ENSSSCG00000016093 #11 ENSSSCG00000040051 #12 AOX1 (ENSSSCG00000029606) #13 SGO2 (ENSSSCG00000016092) #14 ENSSSCG00000016091 #15 SPATS2L (ENSSSCG00000016090) #16 MAIP1 (ENSSSCG00000036676) #17 TYW5 (ENSSSCG00000016087) #18 C2orf69 (ENSSSCG00000016086) #19 ENSSSCG00000016085 #20 SATB2 (ENSSSCG00000021657) #22 ENSSSCG00000041534 PLCL1 (ENSSSCG00000016083) #23 ENSSSCG00000061867 BOLL (ENSSSCG00000016082) #24 MARS2 (ENSSSCG00000034494) RFTN2 (ENSSSCG00000037483) #25 MOBKL3 (ENSSSCG00000016079) #26 HSPE1 (ENSSSCG00000016078) ##28 HSPD1 (ENSSSCG00000016077) ##27 COQ10B (ENSSSCG00000016076) #29 ENSSSCG00000063544 #30 ENSSSCG00000016075 #30 ENSSSCG00000051570 ANKRD44 (ENSSSCG00000016074) #31 PGAP1 (ENSSSCG00000016073) #32 Chacoan peccary MODERN SPECIES 91 ORC2 (ENSCWAG00000010595) NIF3L1 (ENSCWAG00000010511) #7 PPIL3 (ENSCWAG00000010443) #8 CLK1 (ENSCWAG00000010341) #9 BZW1 (ENSCWAG00000009955) #10 ENSCWAG00000009721 #11 ENSCWAG00000009483 #12 AOX1 (ENSCWAG00000009210) #13 SGO2 (ENSCWAG00000009111) #14 KCTD18 (ENSCWAG00000009030) #15 SPATS2L (ENSCWAG00000008608) #16 MAIP1 (ENSCWAG00000008554) #17 TYW5 (ENSCWAG00000008494) #18 C2orf69 (ENSCWAG00000008457) #19 FTCDNL1 (ENSCWAG00000008365) #20 SATB2 (ENSCWAG00000008150) #22 PLCL1 (ENSCWAG00000007994) #23 ENSCWAG00000007948 #24 Artiodactyla_a ANCESTRAL SPECIES 13 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 Artiodactyla_b ANCESTRAL SPECIES 12 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 Cetacea ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b.i.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00390000012561.b.i.a #10 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 Odontoceti ANCESTRAL SPECIES 13 ENSGT00940000159152.d.d ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b.i.b #10 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 Odontoceti_a ANCESTRAL SPECIES 10 ENSGT00940000159152.d.d ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b.i.b #10 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Odontoceti_b ANCESTRAL SPECIES 12 ENSGT00940000159152.d.d ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b.i.b #10 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000154631.c.b ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Monodontidae ANCESTRAL SPECIES 10 ENSGT00940000159152.d.d ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b.i.b #10 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000154631.c.b ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Beluga whale MODERN SPECIES 84 ENSDLEG00000017782 FAM126B (ENSDLEG00000017730) ORC2 (ENSDLEG00000017685) NIF3L1 (ENSDLEG00000017669) #7 PPIL3 (ENSDLEG00000017637) #8 CLK1 (ENSDLEG00000017601) #9 ENSDLEG00000017537 #10 AOX1 (ENSDLEG00000017388) #13 SGO2 (ENSDLEG00000017351) #14 KCTD18 (ENSDLEG00000017330) #15 SPATS2L (ENSDLEG00000017277) #16 MAIP1 (ENSDLEG00000017256) #17 TYW5 (ENSDLEG00000017244) #18 CUNH2orf69 (ENSDLEG00000017234) #19 ENSDLEG00000017202 #20 SATB2 (ENSDLEG00000017180) #22 ENSDLEG00000017147 PLCL1 (ENSDLEG00000017124) #23 ENSDLEG00000017113 ENSDLEG00000017109 BOLL (ENSDLEG00000017047) #24 MARS2 (ENSDLEG00000017031) RFTN2 (ENSDLEG00000017004) #25 HSPE1 (ENSDLEG00000016991) #26 ENSDLEG00000016973 #28 HSPD1 (ENSDLEG00000016961) ##27 COQ10B (ENSDLEG00000016950) #29 SF3B1 (ENSDLEG00000016863) #30 ANKRD44 (ENSDLEG00000016735) #31 PGAP1 (ENSDLEG00000016703) #32 GTF3C3 (ENSDLEG00000016677) #34 Narwhal MODERN SPECIES 302 ENSMMNG00015008710 ORC2 (ENSMMNG00015008727) NIF3L1 (ENSMMNG00015008742) #7 PPIL3 (ENSMMNG00015008752) #8 CLK1 (ENSMMNG00015008783) #9 ENSMMNG00015008840 #10 AOX1 (ENSMMNG00015008883) #13 ENSMMNG00015008917 #14 ENSMMNG00015008923 #14 KCTD18 (ENSMMNG00015008930) #15 SPATS2L (ENSMMNG00015008966) #16 MAIP1 (ENSMMNG00015009034) #17 TYW5 (ENSMMNG00015009041) #18 C2orf69 (ENSMMNG00015009051) #19 FTCDNL1 (ENSMMNG00015009064) #20 SATB2 (ENSMMNG00015009088) #22 ENSMMNG00015009121 PLCL1 (ENSMMNG00015009132) #23 ENSMMNG00015009146 MARS2 (ENSMMNG00015009149) RFTN2 (ENSMMNG00015009156) #25 ENSMMNG00015005118 MOB4 (ENSMMNG00015005131) #26 ENSMMNG00015005152 #28 ENSMMNG00015005160 ##27 COQ10B (ENSMMNG00015005170) #29 SF3B1 (ENSMMNG00015005194) #30 ANKRD44 (ENSMMNG00015005236) #31 PGAP1 (ENSMMNG00015005302) #32 C2orf66 (ENSMMNG00015005331) #33 GTF3C3 (ENSMMNG00015005350) #34 Vaquita MODERN SPECIES 18 ENSPSNG00000017913 ENSPSNG00000017952 ORC2 (ENSPSNG00000017971) NIF3L1 (ENSPSNG00000018036) #7 PPIL3 (ENSPSNG00000018105) #8 CLK1 (ENSPSNG00000018159) #9 ENSPSNG00000018409 #10 AOX1 (ENSPSNG00000018708) #13 SGO2 (ENSPSNG00000018985) #14 KCTD18 (ENSPSNG00000019019) #15 SPATS2L (ENSPSNG00000019081) #16 MAIP1 (ENSPSNG00000019254) #17 TYW5 (ENSPSNG00000019307) #18 C2orf69 (ENSPSNG00000019348) #19 ENSPSNG00000019397 #20 SATB2 (ENSPSNG00000019498) #22 ENSPSNG00000019635 PLCL1 (ENSPSNG00000019688) #23 ENSPSNG00000019773 BOLL (ENSPSNG00000019819) #24 MARS2 (ENSPSNG00000020001) RFTN2 (ENSPSNG00000020023) #25 MOB4 (ENSPSNG00000020101) #26 HSPD1 (ENSPSNG00000020243) ##27 ENSPSNG00000020315 ##28 COQ10B (ENSPSNG00000020376) #29 SF3B1 (ENSPSNG00000020453) #30 ANKRD44 (ENSPSNG00000020570) #31 PGAP1 (ENSPSNG00000020691) #32 C2orf66 (ENSPSNG00000020837) #33 GTF3C3 (ENSPSNG00000002123) #34 Dolphin MODERN SPECIES 16 SATB2 (ENSTTRG00000001254) #22 Sperm whale MODERN SPECIES 11 ENSPCTG00005001851 FAM126B (ENSPCTG00005001830) ORC2 (ENSPCTG00005001802) NIF3L1 (ENSPCTG00005001774) #7 PPIL3 (ENSPCTG00005001749) #8 CLK1 (ENSPCTG00005001575) #9 BZW1 (ENSPCTG00005001498) #10 AOX1 (ENSPCTG00005001418) #13 SGO2 (ENSPCTG00005001385) #14 KCTD18 (ENSPCTG00005001363) #15 SPATS2L (ENSPCTG00005001213) #16 MAIP1 (ENSPCTG00005001167) #17 TYW5 (ENSPCTG00005001148) #18 C2H2orf69 (ENSPCTG00005001135) #19 ENSPCTG00005001114 #20 SATB2 (ENSPCTG00005001020) #22 PLCL1 (ENSPCTG00005000965) #23 BOLL (ENSPCTG00005000834) #24 MARS2 (ENSPCTG00005000802) RFTN2 (ENSPCTG00005000782) #25 MOB4 (ENSPCTG00005000750) #26 HSPE1 (ENSPCTG00005000700) #28 HSPD1 (ENSPCTG00005000653) ##27 COQ10B (ENSPCTG00005000606) #29 SF3B1 (ENSPCTG00005000567) #30 ANKRD44 (ENSPCTG00005000458) #31 PGAP1 (ENSPCTG00005000363) #32 C2orf66 (ENSPCTG00005000282) #33 GTF3C3 (ENSPCTG00005000262) #34 ENSPCTG00005000238 #35 ENSPCTG00005000224 Blue whale MODERN SPECIES 18 ORC2 (ENSBMSG00010003997) NIF3L1 (ENSBMSG00010003954) #7 PPIL3 (ENSBMSG00010003923) #8 CLK1 (ENSBMSG00010003860) #9 ENSBMSG00010003785 #10 ENSBMSG00010003674 #11 AOX1 (ENSBMSG00010003482) #13 ENSBMSG00010003395 #14 ENSBMSG00010003382 #14 KCTD18 (ENSBMSG00010003365) #15 SPATS2L (ENSBMSG00010003251) #16 MAIP1 (ENSBMSG00010003193) #17 TYW5 (ENSBMSG00010003179) #18 C2orf69 (ENSBMSG00010003167) #19 FTCDNL1 (ENSBMSG00010003148) #20 SATB2 (ENSBMSG00010003076) #22 PLCL1 (ENSBMSG00010002964) #23 BOLL (ENSBMSG00010002886) #24 MARS2 (ENSBMSG00010002857) RFTN2 (ENSBMSG00010002848) #25 MOB4 (ENSBMSG00010002811) #26 ENSBMSG00010002778 #28 HSPD1 (ENSBMSG00010002754) ##27 COQ10B (ENSBMSG00010002718) #29 SF3B1 (ENSBMSG00010002624) #30 ENSBMSG00010002564 ANKRD44 (ENSBMSG00010002506) #31 PGAP1 (ENSBMSG00010002370) #32 C2orf66 (ENSBMSG00010002279) #33 GTF3C3 (ENSBMSG00010002241) #34 CCDC150 (ENSBMSG00010002134) #35 Pecora ANCESTRAL SPECIES 16 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 Percora_a ANCESTRAL SPECIES 5 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367.t #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 Bovidae ANCESTRAL SPECIES 8 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367.t #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 Bovinae ANCESTRAL SPECIES 5 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367.t #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 Bos ANCESTRAL SPECIES 6 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.g #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367.t #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Bos_a ANCESTRAL SPECIES 4 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.g #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367.t #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Wild yak MODERN SPECIES 690 AOX1 (ENSBMUG00000000894) #13 SGO2 (ENSBMUG00000000973) #14 KCTD18 (ENSBMUG00000001001) #15 SPATS2L (ENSBMUG00000001103) #16 MAIP1 (ENSBMUG00000001172) #17 TYW5 (ENSBMUG00000001180) #18 C2orf69 (ENSBMUG00000001195) #19 FTCDNL1 (ENSBMUG00000001215) #20 SATB2 (ENSBMUG00000001288) #22 PLCL1 (ENSBMUG00000001392) #23 Domestic yak MODERN SPECIES 11 NIF3L1 (ENSBGRG00000022968) #7 ENSBGRG00000023065 CLK1 (ENSBGRG00000023102) #9 BZW1 (ENSBGRG00000023222) #10 ENSBGRG00000023761 #11 ENSBGRG00000026310 #12 ENSBGRG00000026671 AOX1 (ENSBGRG00000026674) #13 SGO2 (ENSBGRG00000026677) #14 KCTD18 (ENSBGRG00000026680) #15 SPATS2L (ENSBGRG00000026684) #16 MAIP1 (ENSBGRG00000026693) #17 TYW5 (ENSBGRG00000026697) #18 C2orf69 (ENSBGRG00000026703) #19 FTCDNL1 (ENSBGRG00000026708) #20 SATB2 (ENSBGRG00000026716) #22 ENSBGRG00000000192 PLCL1 (ENSBGRG00000000210) #23 BOLL (ENSBGRG00000000262) #24 MARS2 (ENSBGRG00000000375) RFTN2 (ENSBGRG00000000406) #25 ENSBGRG00000000487 #26 HSPE1 (ENSBGRG00000000521) #28 HSPD1 (ENSBGRG00000000539) ##27 COQ10B (ENSBGRG00000000566) #29 SF3B1 (ENSBGRG00000000604) #30 ANKRD44 (ENSBGRG00000000733) #31 PGAP1 (ENSBGRG00000000882) #32 C2orf66 (ENSBGRG00000001016) #33 GTF3C3 (ENSBGRG00000001029) #34 ENSBGRG00000001058 Bos_b ANCESTRAL SPECIES 3 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.g #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b.a ##27 ENSGT00940000155367.t #29 ENSGT00390000018393 #30 ENSGT00940000162534.b ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Cow MODERN SPECIES 11 PPIL3 (ENSBTAG00000005416) CLK1 (ENSBTAG00000005408) #9 BZW1 (ENSBTAG00000006049) #10 AOX2 (ENSBTAG00000026812) #11 AOX4 (ENSBTAG00000038878) #12 ENSBTAG00000047849 AOX1 (ENSBTAG00000009725) #13 SGO2 (ENSBTAG00000031579) #14 KCTD18 (ENSBTAG00000002272) #15 SPATS2L (ENSBTAG00000016092) #16 ENSBTAG00000024003 MAIP1 (ENSBTAG00000019231) #17 TYW5 (ENSBTAG00000019232) #18 C2H2orf69 (ENSBTAG00000009952) #19 ENSBTAG00000031595 #20 SATB2 (ENSBTAG00000016334) #22 PLCL1 (ENSBTAG00000007635) #23 BOLL (ENSBTAG00000031614) #24 MARS2 (ENSBTAG00000002056) RFTN2 (ENSBTAG00000007652) #25 MOB4 (ENSBTAG00000019116) #26 HSPE1 (ENSBTAG00000012589) #28 HSPD1 (ENSBTAG00000012586) ##27 COQ10B (ENSBTAG00000004659) #29 SF3B1 (ENSBTAG00000008915) #30 ENSBTAG00000012171 ANKRD44 (ENSBTAG00000031696) #31 PGAP1 (ENSBTAG00000020416) #32 GTF3C3 (ENSBTAG00000007779) #34 CCDC150 (ENSBTAG00000017695) #35 HECW2 (ENSBTAG00000020696) #36 Hybrid Bos Indicus MODERN SPECIES 11 NIF3L1 (ENSBIXG00005031554) #7 PPIL3 (ENSBIXG00005031553) #8 CLK1 (ENSBIXG00005031552) #9 BZW1 (ENSBIXG00005031551) #10 ENSBIXG00005031550 #11 ENSBIXG00005030534 #12 AOX1 (ENSBIXG00005008599) #13 SGO2 (ENSBIXG00005008643) #14 KCTD18 (ENSBIXG00005005902) #15 ENSBIXG00005008660 SPATS2L (ENSBIXG00005008726) #16 MAIP1 (ENSBIXG00005008787) #17 TYW5 (ENSBIXG00005008805) #18 C2orf69 (ENSBIXG00005008818) #19 FTCDNL1 (ENSBIXG00005008837) #20 SATB2 (ENSBIXG00005008954) #22 PLCL1 (ENSBIXG00005009092) #23 ENSBIXG00005009140 BOLL (ENSBIXG00005009209) #24 MARS2 (ENSBIXG00005009234) RFTN2 (ENSBIXG00005009241) #25 MOB4 (ENSBIXG00005009278) #26 ENSBIXG00005009301 #28 ENSBIXG00005009345 ##27 COQ10B (ENSBIXG00005009394) #29 SF3B1 (ENSBIXG00005000503) #30 ENSBIXG00005009496 ANKRD44 (ENSBIXG00005009540) #31 PGAP1 (ENSBIXG00005009684) #32 C2orf66 (ENSBIXG00005009722) #33 GTF3C3 (ENSBIXG00005005945) #34 American bison MODERN SPECIES 3330 CLK1 (ENSBBBG00000002583) #9 BZW1 (ENSBBBG00000013019) #10 ENSBBBG00000013042 #11 ENSBBBG00000013095 #12 ENSBBBG00000002631 AOX1 (ENSBBBG00000013130) #13 ENSBBBG00000013142 #14 ENSBBBG00000013146 #14 KCTD18 (ENSBBBG00000013155) #15 ENSBBBG00000013159 SPATS2L (ENSBBBG00000013236) #16 MAIP1 (ENSBBBG00000001643) #17 TYW5 (ENSBBBG00000013257) #18 C2orf69 (ENSBBBG00000002681) #19 FTCDNL1 (ENSBBBG00000008285) #20 SATB2 (ENSBBBG00000013343) #22 PLCL1 (ENSBBBG00000002738) #23 BOLL (ENSBBBG00000013412) #24 MARS2 (ENSBBBG00000013415) RFTN2 (ENSBBBG00000002765) #25 MOB4 (ENSBBBG00000013501) #26 ENSBBBG00000013516 ##28 HSPD1 (ENSBBBG00000013534) ##27 ENSBBBG00000007252 #29 ENSBBBG00000013596 #30 ENSBBBG00000013601 ANKRD44 (ENSBBBG00000013667) #31 PGAP1 (ENSBBBG00000013723) #32 C2orf66 (ENSBBBG00000013730) #33 GTF3C3 (ENSBBBG00000002934) #34 ENSBBBG00000013757 #35 Caprinae ANCESTRAL SPECIES 5 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493.h #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b.e #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367.s #29 ENSGT00940000155367.t #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Rambouillet Sheep MODERN SPECIES 11 NIF3L1 (ENSOARG00020016593) #7 PPIL3 (ENSOARG00020016501) #8 CLK1 (ENSOARG00020016395) #9 BZW1 (ENSOARG00020015764) #10 ENSOARG00020015365 #11 ENSOARG00020015282 ENSOARG00020015070 #12 AOX1 (ENSOARG00020014833) #13 ENSOARG00020014683 #15 ENSOARG00020014668 SPATS2L (ENSOARG00020014270) #16 MAIP1 (ENSOARG00020014186) #17 TYW5 (ENSOARG00020014145) #18 C2orf69 (ENSOARG00020014115) #19 FTCDNL1 (ENSOARG00020013918) #20 SATB2 (ENSOARG00020013534) #22 ENSOARG00020013422 ENSOARG00020013393 ENSOARG00020013380 ENSOARG00020013353 ENSOARG00020013326 ENSOARG00020013287 BOLL (ENSOARG00020012643) #24 MARS2 (ENSOARG00020012596) RFTN2 (ENSOARG00020012524) #25 ENSOARG00020012334 #26 HSP10 (ENSOARG00020012227) #28 ENSOARG00020012172 ##27 COQ10B (ENSOARG00020011999) #29 SF3B1 (ENSOARG00020011806) #30 ANKRD44 (ENSOARG00020010197) #31 Goat MODERN SPECIES 11 NIF3L1 (ENSCHIG00000009478) #7 PPIL3 (ENSCHIG00000019642) #8 CLK1 (ENSCHIG00000018314) #9 BZW1 (ENSCHIG00000019964) #10 ENSCHIG00000020570 #11 ENSCHIG00000013677 #12 ENSCHIG00000019390 AOX1 (ENSCHIG00000013439) #13 SGO2 (ENSCHIG00000013638) #14 KCTD18 (ENSCHIG00000022753) #15 SPATS2L (ENSCHIG00000026377) #16 MAIP1 (ENSCHIG00000007507) #17 ENSCHIG00000017324 #18 ENSCHIG00000011016 #19 FTCDNL1 (ENSCHIG00000022126) #20 SATB2 (ENSCHIG00000022376) #22 PLCL1 (ENSCHIG00000013331) #23 ENSCHIG00000011685 ENSCHIG00000021317 BOLL (ENSCHIG00000024995) #24 MARS2 (ENSCHIG00000016548) RFTN2 (ENSCHIG00000012903) #25 ENSCHIG00000026973 #26 HSPE1 (ENSCHIG00000009467) #28 HSPD1 (ENSCHIG00000004382) ##27 ENSCHIG00000020913 #29 SF3B1 (ENSCHIG00000015226) #30 ANKRD44 (ENSCHIG00000017665) #31 ENSCHIG00000012550 PGAP1 (ENSCHIG00000018177) #32 GTF3C3 (ENSCHIG00000016485) #34 Siberian musk deer MODERN SPECIES 351 PPIL3 (ENSMMSG00000024329) #8 CLK1 (ENSMMSG00000024326) #9 ENSMMSG00000024321 #10 ENSMMSG00000024314 #11 ENSMMSG00000013161 #12 ENSMMSG00000012463 AOX1 (ENSMMSG00000012371) #13 SGO2 (ENSMMSG00000012334) #14 KCTD18 (ENSMMSG00000012309) #15 SPATS2L (ENSMMSG00000011944) #16 MAIP1 (ENSMMSG00000011886) #17 TYW5 (ENSMMSG00000011859) #18 C2orf69 (ENSMMSG00000011836) #19 ENSMMSG00000011819 ENSMMSG00000011780 #20 SATB2 (ENSMMSG00000011682) #22 Yarkand deer MODERN SPECIES 31 ENSCHYG00000004999 BZW1 (ENSCHYG00000009251) #10 ENSCHYG00000009654 #11 ENSCHYG00000009851 #12 ENSCHYG00000010410 ENSCHYG00000010452 AOX1 (ENSCHYG00000010517) #13 SGO2 (ENSCHYG00000011236) #14 KCTD18 (ENSCHYG00000011325) #15 SPATS2L (ENSCHYG00000011390) #16 ENSCHYG00000011736 MAIP1 (ENSCHYG00000011759) #17 TYW5 (ENSCHYG00000011850) #18 C2orf69 (ENSCHYG00000011903) #19 ENSCHYG00000011965 #20 SATB2 (ENSCHYG00000012100) #22 ENSCHYG00000012371 PLCL1 (ENSCHYG00000012427) #23 BOLL (ENSCHYG00000012765) #24 MARS2 (ENSCHYG00000013177) RFTN2 (ENSCHYG00000013201) #25 MOB4 (ENSCHYG00000013303) #26 ENSCHYG00000013442 ##28 ENSCHYG00000013593 ##27 ENSCHYG00000013673 #29 SF3B1 (ENSCHYG00000013853) #30 ANKRD44 (ENSCHYG00000014222) #31 PGAP1 (ENSCHYG00000015550) #32 C2orf66 (ENSCHYG00000015983) #33 GTF3C3 (ENSCHYG00000016098) #34 CCDC150 (ENSCHYG00000016506) #35 Camelidae ANCESTRAL SPECIES 58 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000006350.m.a.c.b.a.b ##28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Arabian camel MODERN SPECIES 31 PPIL3 (ENSCDRG00005007234) #8 CLK1 (ENSCDRG00005007272) #9 BZW1 (ENSCDRG00005008038) #10 ENSCDRG00005008482 #11 ENSCDRG00005008740 #12 AOX1 (ENSCDRG00005009121) #13 ENSCDRG00005009409 #14 ENSCDRG00005009460 #14 KCTD18 (ENSCDRG00005009496) #15 SPATS2L (ENSCDRG00005009592) #16 ENSCDRG00005010296 MAIP1 (ENSCDRG00005010319) #17 TYW5 (ENSCDRG00005010376) #18 C2orf69 (ENSCDRG00005010427) #19 FTCDNL1 (ENSCDRG00005010462) #20 SATB2 (ENSCDRG00005010563) #22 PLCL1 (ENSCDRG00005010932) #23 BOLL (ENSCDRG00005011111) #24 MARS2 (ENSCDRG00005011548) RFTN2 (ENSCDRG00005011566) #25 MOB4 (ENSCDRG00005011619) #26 HSPE1 (ENSCDRG00005011802) #28 HSPD1 (ENSCDRG00005011897) ##27 COQ10B (ENSCDRG00005012028) #29 ENSCDRG00005012185 SF3B1 (ENSCDRG00005012215) #30 ANKRD44 (ENSCDRG00005012443) #31 PGAP1 (ENSCDRG00005012687) #32 C2orf66 (ENSCDRG00005012843) #33 GTF3C3 (ENSCDRG00005012878) #34 CCDC150 (ENSCDRG00005012991) #35 Alpaca MODERN SPECIES 63 MAIP1 (ENSVPAG00000007005) #17 TYW5 (ENSVPAG00000007004) #18 C2orf69 (ENSVPAG00000007002) #19 SATB2 (ENSVPAG00000007001) #22 Laurasiatheria_b ANCESTRAL SPECIES 16 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Carnivora ANCESTRAL SPECIES 17 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Caniformia ANCESTRAL SPECIES 14 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.b ##28 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Caniformia_b ANCESTRAL SPECIES 13 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00390000004856.w.b ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Ursidae ANCESTRAL SPECIES 7 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b.f #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00390000004856.w.b ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393.p #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Ursus ANCESTRAL SPECIES 4 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b.f #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00940000154276.kb.a.b ENSGT00390000004856.w.b ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393.p #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 American black bear MODERN SPECIES 846 ENSUAMG00000028250 #20 SATB2 (ENSUAMG00000028249) #22 Polar bear MODERN SPECIES 142 ORC2 (ENSUMAG00000021479) PPIL3 (ENSUMAG00000021460) #8 NIF3L1 (ENSUMAG00000021455) #7 CLK1 (ENSUMAG00000021445) #9 BZW1 (ENSUMAG00000021441) #10 ENSUMAG00000021399 #11 ENSUMAG00000021134 #12 AOX1 (ENSUMAG00000021073) #13 SGO2 (ENSUMAG00000021068) #14 KCTD18 (ENSUMAG00000021066) #15 SPATS2L (ENSUMAG00000021060) #16 MAIP1 (ENSUMAG00000021043) #17 TYW5 (ENSUMAG00000021039) #18 C2orf69 (ENSUMAG00000021037) #19 FTCDNL1 (ENSUMAG00000021033) #20 SATB2 (ENSUMAG00000021003) #22 PLCL1 (ENSUMAG00000020984) #23 ENSUMAG00000020978 ENSUMAG00000020976 BOLL (ENSUMAG00000020969) #24 MARS2 (ENSUMAG00000020961) RFTN2 (ENSUMAG00000020958) #25 MOB4 (ENSUMAG00000020955) #26 HSPE1 (ENSUMAG00000020954) #28 HSPD1 (ENSUMAG00000020952) ##27 COQ10B (ENSUMAG00000020949) #29 SF3B1 (ENSUMAG00000020945) #30 ANKRD44 (ENSUMAG00000020937) #31 PGAP1 (ENSUMAG00000020815) #32 GTF3C3 (ENSUMAG00000020787) #34 CCDC150 (ENSUMAG00000020726) #35 Giant Panda MODERN SPECIES 11 ORC2 (ENSAMEG00000005940) NIF3L1 (ENSAMEG00000005921) #7 PPIL3 (ENSAMEG00000005917) #8 CLK1 (ENSAMEG00000005887) #9 BZW1 (ENSAMEG00000005859) #10 AOX2 (ENSAMEG00000005633) #11 AOX4 (ENSAMEG00000005561) #12 AOX1 (ENSAMEG00000005445) #13 SGO2 (ENSAMEG00000005435) #14 KCTD18 (ENSAMEG00000005423) #15 SPATS2L (ENSAMEG00000005405) #16 MAIP1 (ENSAMEG00000005390) #17 TYW5 (ENSAMEG00000005386) #18 C2orf69 (ENSAMEG00000005381) #19 ENSAMEG00000023460 SATB2 (ENSAMEG00000005350) #22 ENSAMEG00000019732 PLCL1 (ENSAMEG00000013707) #23 BOLL (ENSAMEG00000013712) #24 MARS2 (ENSAMEG00000019748) RFTN2 (ENSAMEG00000013737) #25 MOB4 (ENSAMEG00000013751) #26 ENSAMEG00000013769 ##28 HSPD1 (ENSAMEG00000013770) ##27 COQ10B (ENSAMEG00000013802) #29 SF3B1 (ENSAMEG00000013809) #30 ANKRD44 (ENSAMEG00000013836) #31 PGAP1 (ENSAMEG00000013887) #32 C2orf66 (ENSAMEG00000013924) #33 GTF3C3 (ENSAMEG00000013925) #34 CCDC150 (ENSAMEG00000013946) #35 Mustelinae ANCESTRAL SPECIES 44 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000163579 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.b.a.a ##28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 American mink MODERN SPECIES 40 NIF3L (ENSNVIG00000008895) #7 ENSNVIG00000008933 ENSNVIG00000008938 #9 ENSNVIG00000008952 #9 BZW1 (ENSNVIG00000008992) #10 ENSNVIG00000009087 #11 ENSNVIG00000009216 #12 AOX1 (ENSNVIG00000009846) #13 SGO2 (ENSNVIG00000009949) #14 KCTD18 (ENSNVIG00000009981) #15 SPATS2L (ENSNVIG00000010010) #16 MAIP1 (ENSNVIG00000010220) #17 TYW5 (ENSNVIG00000010238) #18 C2orf69 (ENSNVIG00000010249) #19 ENSNVIG00000010260 #20 SATB2 (ENSNVIG00000010289) #22 PLCL1 (ENSNVIG00000010416) #23 ENSNVIG00000010433 BOLL (ENSNVIG00000010444) #24 MARS2 (ENSNVIG00000010510) RFTN2 (ENSNVIG00000010521) #25 PHOCN (ENSNVIG00000010530) #26 ENSNVIG00000010568 ##28 ENSNVIG00000010575 ##27 COQ10B (ENSNVIG00000010606) #29 SF3B1 (ENSNVIG00000010631) #30 ANKRD44 (ENSNVIG00000010686) #31 PGAP1 (ENSNVIG00000010723) #32 C2orf66 (ENSNVIG00000010821) #33 GTF3C3 (ENSNVIG00000010824) #34 CCDC150 (ENSNVIG00000010849) #35 Ferret MODERN SPECIES 333 SGO2 (ENSMPUG00000008053) #14 KCTD18 (ENSMPUG00000008044) #15 SPATS2L (ENSMPUG00000008030) #16 MAIP1 (ENSMPUG00000008001) #17 TYW5 (ENSMPUG00000007993) #18 C2orf69 (ENSMPUG00000007987) #19 ENSMPUG00000007983 SATB2 (ENSMPUG00000007972) #22 PLCL1 (ENSMPUG00000007965) #23 BOLL (ENSMPUG00000007922) #24 MARS2 (ENSMPUG00000019823) ENSMPUG00000019822 RFTN2 (ENSMPUG00000007918) #25 MOB4 (ENSMPUG00000007910) #26 ENSMPUG00000007818 ##27 COQ10B (ENSMPUG00000007810) #29 SF3B1 (ENSMPUG00000007799) #30 ANKRD44 (ENSMPUG00000007785) #31 PGAP1 (ENSMPUG00000007770) #32 GTF3C3 (ENSMPUG00000007764) #34 CCDC150 (ENSMPUG00000007750) #35 HECW2 (ENSMPUG00000007553) #36 STK17B (ENSMPUG00000007548) #37 Canidae ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01070000254992 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.b ##28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Canis_lupus ANCESTRAL SPECIES 32 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b.c #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000182922.a.a.a.b.a.a.b ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT01070000254992 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.b ##28 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Dingo MODERN SPECIES 398 HYCC2 (ENSCAFG00020003567) ORC2 (ENSCAFG00020003630) NIF3L1 (ENSCAFG00020004364) #7 PPIL3 (ENSCAFG00020004369) #8 CLK1 (ENSCAFG00020004400) #9 ENSCAFG00020004433 #10 ENSCAFG00020004462 #11 ENSCAFG00020004494 #12 ENSCAFG00020004535 SGO2 (ENSCAFG00020004540) #14 KCTD18 (ENSCAFG00020004542) #15 SPATS2L (ENSCAFG00020004547) #16 MAIP1 (ENSCAFG00020004558) #17 ENSCAFG00020004570 #18 C2orf69 (ENSCAFG00020004572) #19 SATB2 (ENSCAFG00020004584) #22 PLCL1 (ENSCAFG00020004643) #23 ENSCAFG00020004654 BOLL (ENSCAFG00020004659) #24 MARS2 (ENSCAFG00020004676) RFTN2 (ENSCAFG00020004690) #25 MOB4 (ENSCAFG00020004694) #26 ENSCAFG00020004700 ##28 HSPD1 (ENSCAFG00020004710) ##27 ENSCAFG00020004741 COQ10B (ENSCAFG00020004745) #29 SF3B1 (ENSCAFG00020004750) #30 ANKRD44 (ENSCAFG00020004766) #31 PGAP1 (ENSCAFG00020004924) #32 GTF3C3 (ENSCAFG00020004945) #34 CCDC150 (ENSCAFG00020004958) #35 Dog MODERN SPECIES 30 ORC2 (ENSCAFG00845029735) NIF3L1 (ENSCAFG00845029603) #7 PPIL3 (ENSCAFG00845029569) #8 CLK1 (ENSCAFG00845029455) #9 ENSCAFG00845029244 #10 AOX2 (ENSCAFG00845029172) #11 AOX4 (ENSCAFG00845028797) #12 RPL21 (ENSCAFG00845028706) SGO2 (ENSCAFG00845028523) #14 KCTD18 (ENSCAFG00845028480) #15 ENSCAFG00845028453 SPATS2L (ENSCAFG00845028292) #16 MAIP1 (ENSCAFG00845028191) #17 TYW5 (ENSCAFG00845028098) #18 C2orf69 (ENSCAFG00845028048) #19 SATB2 (ENSCAFG00845027789) #22 PLCL1 (ENSCAFG00845027611) #23 BOLL (ENSCAFG00845027465) #24 MARS2 (ENSCAFG00845027432) RFTN2 (ENSCAFG00845027373) #25 ENSCAFG00845027301 HSPE1 (ENSCAFG00845027216) #26 HSPD1 (ENSCAFG00845027075) ##27 SF3B1 (ENSCAFG00845026632) #30 COQ10B (ENSCAFG00845026337) #29 ENSCAFG00845026214 ANKRD44 (ENSCAFG00845025354) #31 PGAP1 (ENSCAFG00845024751) #32 C2orf66 (ENSCAFG00845024629) #33 GTF3C3 (ENSCAFG00845024524) #34 CCDC150 (ENSCAFG00845023218) #35 Red fox MODERN SPECIES 41 ORC2 (ENSVVUG00000018996) NIF3L1 (ENSVVUG00000019010) #7 PPIL3 (ENSVVUG00000019021) #8 CLK1 (ENSVVUG00000019051) #9 ENSVVUG00000019055 BZW1 (ENSVVUG00000019058) #10 ENSVVUG00000019458 #11 ENSVVUG00000025395 #12 SGO2 (ENSVVUG00000025845) #14 KCTD18 (ENSVVUG00000025846) #15 ENSVVUG00000025847 SPATS2L (ENSVVUG00000025851) #16 MAIP1 (ENSVVUG00000025867) #17 TYW5 (ENSVVUG00000025871) #18 C2orf69 (ENSVVUG00000025875) #19 SATB2 (ENSVVUG00000025880) #22 ENSVVUG00000025893 PLCL1 (ENSVVUG00000025896) #23 ENSVVUG00000025899 BOLL (ENSVVUG00000025901) #24 MARS2 (ENSVVUG00000025921) RFTN2 (ENSVVUG00000025925) #25 MOB4 (ENSVVUG00000025930) #26 ENSVVUG00000025937 ##28 HSPD1 (ENSVVUG00000025940) ##27 COQ10B (ENSVVUG00000025944) #29 SF3B1 (ENSVVUG00000025948) #30 ANKRD44 (ENSVVUG00000025957) #31 PGAP1 (ENSVVUG00000025981) #32 GTF3C3 (ENSVVUG00000025988) #34 CCDC150 (ENSVVUG00000025997) #35 Felidae ANCESTRAL SPECIES 15 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00940000154107.b #14 ENSGT00530000064234.k #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00390000004856.w.b ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367.o #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 Panthera ANCESTRAL SPECIES 9 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00940000154107.b #14 ENSGT00530000064234.k #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00390000004856.w.b ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367.o #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Panthera_a ANCESTRAL SPECIES 6 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00940000154107.b #14 ENSGT00530000064234.k #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00390000004856.w.b ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367.o #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 lion MODERN SPECIES 8 NDUFB3 (ENSPLOG00000015772) HYCC2 (ENSPLOG00000015803) ORC2 (ENSPLOG00000015970) NIF3L1 (ENSPLOG00000016032) #7 PPIL3 (ENSPLOG00000016086) #8 CLK1 (ENSPLOG00000016118) #9 BZW1 (ENSPLOG00000016320) #10 ENSPLOG00000016579 #11 SGO2 (ENSPLOG00000016840) #14 KCTD18 (ENSPLOG00000016872) #15 SPATS2L (ENSPLOG00000016944) #16 MAIP1 (ENSPLOG00000010863) #17 TYW5 (ENSPLOG00000010891) #18 C2orf69 (ENSPLOG00000010947) #19 FTCDNL1 (ENSPLOG00000010989) #20 SATB2 (ENSPLOG00000011078) #22 PLCL1 (ENSPLOG00000011340) #23 ENSPLOG00000011407 BOLL (ENSPLOG00000011460) #24 MARS2 (ENSPLOG00000011689) RFTN2 (ENSPLOG00000011715) #25 MOB4 (ENSPLOG00000011894) #26 ENSPLOG00000012097 #28 HSPD1 (ENSPLOG00000012200) ##27 ENSPLOG00000012317 #29 ENSPLOG00000012415 SF3B1 (ENSPLOG00000012481) #30 ANKRD44 (ENSPLOG00000012744) #31 PGAP1 (ENSPLOG00000012908) #32 GTF3C3 (ENSPLOG00000013217) #34 CCDC150 (ENSPLOG00000013330) #35 leopard MODERN SPECIES 115 HYCC2 (ENSPPRG00000010091) ORC2 (ENSPPRG00000010416) NIF3L1 (ENSPPRG00000011329) #7 PPIL3 (ENSPPRG00000011604) #8 CLK1 (ENSPPRG00000018038) #9 BZW1 (ENSPPRG00000021144) #10 ENSPPRG00000001179 #11 ENSPPRG00000002911 #12 SGO2 (ENSPPRG00000003606) #14 KCTD18 (ENSPPRG00000003708) #15 SPATS2L (ENSPPRG00000005755) #16 MAIP1 (ENSPPRG00000005920) #17 TYW5 (ENSPPRG00000005974) #18 C2orf69 (ENSPPRG00000006014) #19 FTCDNL1 (ENSPPRG00000006344) #20 SATB2 (ENSPPRG00000006763) #22 ENSPPRG00000006827 ENSPPRG00000018398 PLCL1 (ENSPPRG00000006990) #23 BOLL (ENSPPRG00000007352) #24 MARS2 (ENSPPRG00000018464) RFTN2 (ENSPPRG00000007473) #25 ENSPPRG00000007733 #28 MOB4 (ENSPPRG00000008095) #26 ENSPPRG00000008279 ##27 ENSPPRG00000018513 ENSPPRG00000008688 #29 SF3B1 (ENSPPRG00000009090) #30 ANKRD44 (ENSPPRG00000009896) #31 PGAP1 (ENSPPRG00000010301) #32 C2orf66 (ENSPPRG00000010325) #33 Tiger MODERN SPECIES 481 ENSPTIG00000017025 #15 SPATS2L (ENSPTIG00000009880) #16 MAIP1 (ENSPTIG00000007574) #17 TYW5 (ENSPTIG00000005502) #18 C2orf69 (ENSPTIG00000004162) #19 FTCDNL1 (ENSPTIG00000019386) #20 SATB2 (ENSPTIG00000015066) #22 PLCL1 (ENSPTIG00000013578) #23 BOLL (ENSPTIG00000011925) #24 RFTN2 (ENSPTIG00000010229) #25 MOB4 (ENSPTIG00000008517) #26 HSPE1 (ENSPTIG00000007777) #28 HSPD1 (ENSPTIG00000006760) ##27 ENSPTIG00000004508 #29 SF3B1 (ENSPTIG00000021557) #30 ANKRD44 (ENSPTIG00000018232) #31 PGAP1 (ENSPTIG00000013798) #32 C2orf66 (ENSPTIG00000013318) #33 GTF3C3 (ENSPTIG00000011830) #34 CCDC150 (ENSPTIG00000010300) #35 ENSPTIG00000007344 HECW2 (ENSPTIG00000004499) #36 Laurasiatheria_c ANCESTRAL SPECIES 18 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 Chiroptera ANCESTRAL SPECIES 11 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.b ##28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367.r #29 ENSGT00390000018393 #30 ENSGT00950000182908.D.f #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Megabat MODERN SPECIES 173 SATB2 (ENSPVAG00000012029) #22 Microchiroptera ANCESTRAL SPECIES 15 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.d ##28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367.r #29 ENSGT00390000018393 #30 ENSGT00950000182908.D.f #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 Greater horseshoe bat MODERN SPECIES 26 ORC2 (ENSRFEG00010017722) NIF3L1 (ENSRFEG00010017775) #7 PPIL3 (ENSRFEG00010017851) #8 CLK1 (ENSRFEG00010017933) #9 BZW1 (ENSRFEG00010018183) #10 ENSRFEG00010018448 #11 ENSRFEG00010019480 #12 AOX1 (ENSRFEG00010021989) #13 SGO2 (ENSRFEG00010022000) #14 KCTD18 (ENSRFEG00010022002) #15 SPATS2L (ENSRFEG00010022016) #16 MAIP1 (ENSRFEG00010022032) #17 TYW5 (ENSRFEG00010022036) #18 C2orf69 (ENSRFEG00010022039) #19 FTCDNL1 (ENSRFEG00010022040) #20 SATB2 (ENSRFEG00010022046) #22 PLCL1 (ENSRFEG00010022056) #23 BOLL (ENSRFEG00010022065) #24 MARS2 (ENSRFEG00010022069) RFTN2 (ENSRFEG00010022072) #25 ENSRFEG00010022073 MOB4 (ENSRFEG00010022077) #26 ENSRFEG00010022080 ##28 HSPD1 (ENSRFEG00010022083) ##27 ENSRFEG00010022086 #29 SF3B1 (ENSRFEG00010022087) #30 ANKRD44 (ENSRFEG00010022091) #31 PGAP1 (ENSRFEG00010022103) #32 GTF3C3 (ENSRFEG00010022114) #34 CCDC150 (ENSRFEG00010022122) #35 HECW2 (ENSRFEG00010022130) #36 Microbat MODERN SPECIES 940 ORC2 (ENSMLUG00000001662) NIF3L1 (ENSMLUG00000001658) #7 PPIL3 (ENSMLUG00000013189) #8 CLK1 (ENSMLUG00000000344) #9 BZW1 (ENSMLUG00000001653) #10 ENSMLUG00000022412 #11 ENSMLUG00000027760 #12 AOX1 (ENSMLUG00000016684) #13 SGO2 (ENSMLUG00000004245) #14 KCTD18 (ENSMLUG00000006605) #15 SPATS2L (ENSMLUG00000006594) #16 MAIP1 (ENSMLUG00000015960) #17 TYW5 (ENSMLUG00000015955) #18 C2orf69 (ENSMLUG00000026751) #19 ENSMLUG00000011411 #20 SATB2 (ENSMLUG00000001554) #22 PLCL1 (ENSMLUG00000002677) #23 BOLL (ENSMLUG00000004999) #24 RFTN2 (ENSMLUG00000004991) #25 MOB4 (ENSMLUG00000004971) #26 ENSMLUG00000000883 HSPE1 (ENSMLUG00000000878) ##28 ENSMLUG00000000871 ##27 COQ10B (ENSMLUG00000000865) #29 SF3B1 (ENSMLUG00000000840) #30 ENSMLUG00000005254 ANKRD44 (ENSMLUG00000010842) #31 PGAP1 (ENSMLUG00000010784) #32 GTF3C3 (ENSMLUG00000024692) #34 CCDC150 (ENSMLUG00000001986) #35 HECW2 (ENSMLUG00000007654) #36 Equus ANCESTRAL SPECIES 18 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b.b #13 ENSGT00950000183114.a.b.b.f.b.a #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00390000005254.i.a.b ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Donkey MODERN SPECIES 24 NIF3L1 (ENSEASG00005001400) #7 CLK1 (ENSEASG00005000996) #9 BZW1 (ENSEASG00005000922) #10 ENSEASG00005021400 #11 ENSEASG00005028089 #12 ENSEASG00005029204 #11 ENSEASG00005024840 #13 ENSEASG00005027058 #13 SGO2 (ENSEASG00005024538) #14 KCTD18 (ENSEASG00005020042) #15 SPATS2L (ENSEASG00005020050) #16 MAIP1 (ENSEASG00005020067) #17 TYW5 (ENSEASG00005026976) #18 C2orf69 (ENSEASG00005031146) #19 ENSEASG00005020080 #20 ENSEASG00005029514 #22 PLCL1 (ENSEASG00005020113) #23 ENSEASG00005020114 BOLL (ENSEASG00005020122) #24 MARS2 (ENSEASG00005020133) RFTN2 (ENSEASG00005020136) #25 MOB4 (ENSEASG00005020142) #26 HSPE1 (ENSEASG00005034821) #28 ENSEASG00005020152 ##27 COQ10B (ENSEASG00005032559) #29 SF3B1 (ENSEASG00005020159) #30 ENSEASG00005020167 ANKRD44 (ENSEASG00005020169) #31 PGAP1 (ENSEASG00005020202) #32 C2orf66 (ENSEASG00005029887) #33 GTF3C3 (ENSEASG00005020250) #34 Horse MODERN SPECIES 9 CLK1 (ENSECAG00000015355) #9 BZW1 (ENSECAG00000011768) #10 ENSECAG00000015199 #11 AOX4 (ENSECAG00000024701) #12 ENSECAG00000032497 #12 ENSECAG00000058396 ENSECAG00000007830 #13 ENSECAG00000018147 #13 SGO2 (ENSECAG00000006038) #14 KCTD18 (ENSECAG00000001039) #15 SPATS2L (ENSECAG00000018564) #16 MAIP1 (ENSECAG00000050073) #17 TYW5 (ENSECAG00000014128) #18 C18H2orf69 (ENSECAG00000014107) #19 ENSECAG00000013663 #20 SATB2 (ENSECAG00000010043) #22 ENSECAG00000058569 BOLL (ENSECAG00000040654) #24 PLCL1 (ENSECAG00000007274) #23 MARS2 (ENSECAG00000004931) RFTN2 (ENSECAG00000021296) #25 MOB4 (ENSECAG00000015560) #26 ENSECAG00000055696 ENSECAG00000049872 ##28 HSPD1 (ENSECAG00000008968) ##27 COQ10B (ENSECAG00000006436) #29 SF3B1 (ENSECAG00000021657) #30 ENSECAG00000034847 ANKRD44 (ENSECAG00000008835) #31 PGAP1 (ENSECAG00000019980) #32 C2orf66 (ENSECAG00000058124) #33 Atlantogenata ANCESTRAL SPECIES 9 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Xenarthra ANCESTRAL SPECIES 28 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 Sloth MODERN SPECIES 1727 SATB2 (ENSCHOG00000012005) #22 Armadillo MODERN SPECIES 1606 ENSDNOG00000007984 ORC2 (ENSDNOG00000001397) NIF3L1 (ENSDNOG00000042985) #7 PPIL3 (ENSDNOG00000039120) #8 CLK1 (ENSDNOG00000007543) #9 ENSDNOG00000044684 #11 ENSDNOG00000045945 #12 AOX1 (ENSDNOG00000017910) #13 SGO2 (ENSDNOG00000041594) #14 KCTD18 (ENSDNOG00000033036) #15 SPATS2L (ENSDNOG00000011539) #16 MAIP1 (ENSDNOG00000031166) #17 TYW5 (ENSDNOG00000016467) #18 C2orf69 (ENSDNOG00000031567) #19 ENSDNOG00000031405 #20 SATB2 (ENSDNOG00000001292) #22 ENSDNOG00000039662 EGLN2 (ENSDNOG00000044897) RAB4B (ENSDNOG00000035069) MIA (ENSDNOG00000025220) ENSDNOG00000018717 ACTMAP (ENSDNOG00000034966) ITPKC (ENSDNOG00000040932) COQ8B (ENSDNOG00000000156) NUMBL (ENSDNOG00000000154) LTBP4 (ENSDNOG00000045716) SHKBP1 (ENSDNOG00000007810) ENSDNOG00000046051 Afrotheria ANCESTRAL SPECIES 1 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000163579 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Afrotheria_a ANCESTRAL SPECIES 1 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000163579 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.f.a.b #11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.c.a #28 ENSGT00390000005727.a.b.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Elephant MODERN SPECIES 301 ORC2 (ENSLAFG00000022430) NIF3L1 (ENSLAFG00000009897) #7 ENSLAFG00000009894 CLK1 (ENSLAFG00000009891) #9 BZW1 (ENSLAFG00000009883) #10 ENSLAFG00000026161 #11 ENSLAFG00000028503 #12 AOX1 (ENSLAFG00000007070) #13 SGO2 (ENSLAFG00000028451) #14 KCTD18 (ENSLAFG00000003281) #15 SPATS2L (ENSLAFG00000001437) #16 MAIP1 (ENSLAFG00000011639) #17 TYW5 (ENSLAFG00000018708) #18 C2orf69 (ENSLAFG00000018707) #19 ENSLAFG00000030925 #20 SATB2 (ENSLAFG00000002924) #22 PLCL1 (ENSLAFG00000016349) #23 BOLL (ENSLAFG00000010956) #24 MARS2 (ENSLAFG00000030667) RFTN2 (ENSLAFG00000000141) #25 MOB4 (ENSLAFG00000008054) #26 ENSLAFG00000000057 #28 HSPD1 (ENSLAFG00000000053) ##27 COQ10B (ENSLAFG00000000052) #29 SF3B1 (ENSLAFG00000001956) #30 ANKRD44 (ENSLAFG00000002537) #31 PGAP1 (ENSLAFG00000022372) #32 GTF3C3 (ENSLAFG00000001792) #34 CCDC150 (ENSLAFG00000008819) #35 HECW2 (ENSLAFG00000011976) #36 STK17B (ENSLAFG00000011972) #37 Hyrax MODERN SPECIES 1548 SATB2 (ENSPCAG00000012822) #22 Tenrec MODERN SPECIES 1907 SATB2 (ENSETEG00000013425) #22 Marsupialia ANCESTRAL SPECIES 5 ENSGT01050000244869.a.a.a.b.a.a.a.a.a ENSGT01050000244869.a.a.a.b.a.a.a.b.a ENSGT00940000162662 ENSGT01050000244869.a.a.a.b.a.b.d ENSGT01050000244869.a.a.a.b.a.b.c ENSGT01050000244869.a.a.a.b.a.a.a.b.b ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a #28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Marsupialia_b ANCESTRAL SPECIES 3 ENSGT01050000244869.a.a.a.b.a.a.a.a.a ENSGT01050000244869.a.a.a.b.a.a.a.b.a ENSGT00940000162662 ENSGT01050000244869.a.a.a.b.a.b.d ENSGT01050000244869.a.a.a.b.a.b.c ENSGT01050000244869.a.a.a.b.a.a.b.c ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a #28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Diprotodontia ANCESTRAL SPECIES 11 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a #28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 Diprotodontia_a ANCESTRAL SPECIES 9 ENSGT00950000183114.a.b.b.f.a.a #12 ENSGT00950000183114.a.b.b.f.b #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00550000075136 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.m.a.b #28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00390000015052.j.b koala MODERN SPECIES 52 SATB2 (ENSPCIG00000011693) #22 ENSPCIG00000014254 PLCL1 (ENSPCIG00000015570) #23 ENSPCIG00000010605 #24 MARS2 (ENSPCIG00000010610) RFTN2 (ENSPCIG00000010611) #25 ENSPCIG00000010617 #26 ENSPCIG00000010634 #28 HSPD1 (ENSPCIG00000010636) ##27 COQ10B (ENSPCIG00000010639) #29 ENSPCIG00000032633 SF3B1 (ENSPCIG00000010642) #30 ANKRD44 (ENSPCIG00000010651) #31 PGAP1 (ENSPCIG00000010659) #32 GTF3C3 (ENSPCIG00000010674) #34 ENSPCIG00000010684 #35 Common wonbat MODERN SPECIES 1018 ENSVURG00010015914 ENSVURG00010015949 ENSVURG00010016231 ENSVURG00010016251 ENSVURG00010016261 ENSVURG00010016266 ENSVURG00010016286 ENSVURG00010016392 ENSVURG00010016490 KCTD18 (ENSVURG00010016512) #15 SPATS2L (ENSVURG00010016539) #16 MAIP1 (ENSVURG00010016655) #17 TYW5 (ENSVURG00010016662) #18 C2orf69 (ENSVURG00010016673) #19 ENSVURG00010016695 #20 SATB2 (ENSVURG00010016725) #22 ENSVURG00010016787 ENSVURG00010016799 ENSVURG00010016811 PLCL1 (ENSVURG00010016821) #23 BOLL (ENSVURG00010016845) #24 MARS2 (ENSVURG00010016927) RFTN2 (ENSVURG00010016931) #25 MOB4 (ENSVURG00010016938) #26 ENSVURG00010016957 #28 HSPD1 (ENSVURG00010016966) ##27 COQ10B (ENSVURG00010016979) #29 SF3B1 (ENSVURG00010016994) #30 ANKRD44 (ENSVURG00010017027) #31 PGAP1 (ENSVURG00010017062) #32 C2orf66 (ENSVURG00010017088) #33 Wallaby MODERN SPECIES 2771 ENSMEUG00000005161 #22 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000028897 ENSSHAG00000001437 ENSSHAG00000017209 ENSSHAG00000017107 ENSSHAG00000017063 ENSSHAG00000016877 #12 ENSSHAG00000016703 #12 ENSSHAG00000016525 #13 ENSSHAG00000024050 #14 KCTD18 (ENSSHAG00000016332) #15 SPATS2L (ENSSHAG00000016122) #16 MAIP1 (ENSSHAG00000014443) #17 TYW5 (ENSSHAG00000014351) #18 C2orf69 (ENSSHAG00000014333) #19 FTCDNL1 (ENSSHAG00000013838) #20 SATB2 (ENSSHAG00000011077) #22 PLCL1 (ENSSHAG00000018454) #23 BOLL (ENSSHAG00000018057) #24 RFTN2 (ENSSHAG00000017876) #25 MARS2 (ENSSHAG00000017980) MOB4 (ENSSHAG00000017821) #26 HSPE1 (ENSSHAG00000017770) #28 HSPD1 (ENSSHAG00000017750) ##27 COQ10B (ENSSHAG00000017719) #29 SF3B1 (ENSSHAG00000017564) #30 ANKRD44 (ENSSHAG00000016824) #31 PGAP1 (ENSSHAG00000016631) #32 C2orf66 (ENSSHAG00000029653) #33 GTF3C3 (ENSSHAG00000016483) #34 CCDC150 (ENSSHAG00000016389) #35 HECW2 (ENSSHAG00000015049) #36 Opossum MODERN SPECIES 3 ENSMODG00000045687 ENSMODG00000037855 ENSMODG00000048837 ENSMODG00000024581 ENSMODG00000051203 AOX4 (ENSMODG00000028424) #12 ENSMODG00000041712 #12 AOX1 (ENSMODG00000012485) #13 ENSMODG00000012421 #14 KCTD18 (ENSMODG00000012419) #15 SPATS2L (ENSMODG00000012413) #16 MAIP1 (ENSMODG00000012389) #17 TYW5 (ENSMODG00000012381) #18 C2orf69 (ENSMODG00000012380) #19 ENSMODG00000024601 #20 SATB2 (ENSMODG00000012352) #22 PLCL1 (ENSMODG00000012331) #23 BOLL (ENSMODG00000012323) #24 MARS2 (ENSMODG00000024604) RFTN2 (ENSMODG00000012311) #25 MOB4 (ENSMODG00000012305) #26 HSPE1 (ENSMODG00000012295) ##28 ENSMODG00000012289 ##27 COQ10B (ENSMODG00000012281) #29 SF3B1 (ENSMODG00000012275) #30 ENSMODG00000012241 ANKRD44 (ENSMODG00000012238) #31 PGAP1 (ENSMODG00000012214) #32 C2orf66 (ENSMODG00000028631) #33 GTF3C3 (ENSMODG00000012196) #34 CCDC150 (ENSMODG00000012183) #35 Platypus MODERN SPECIES 18 ENSOANG00000003495 ENSOANG00000045194 NDUFB3 (ENSOANG00000036170) HYCC2 (ENSOANG00000044954) ORC2 (ENSOANG00000010096) NIF3L1 (ENSOANG00000010095) #7 ENSOANG00000008065 CLK1 (ENSOANG00000012539) #9 BZW1 (ENSOANG00000010824) #10 ENSOANG00000049296 #12 ENSOANG00000044935 #14 ENSOANG00000045688 #16 ENSOANG00000036911 #17 TYW5 (ENSOANG00000040342) #18 ENSOANG00000002096 #19 SATB2 (ENSOANG00000039784) #22 PLCL1 (ENSOANG00000044001) #23 BOLL (ENSOANG00000019928) #24 RFTN2 (ENSOANG00000020014) #25 MOB4 (ENSOANG00000044127) #26 ENSOANG00000008195 ENSOANG00000010415 ##28 HSPD1 (ENSOANG00000010414) ##27 COQ10B (ENSOANG00000043506) #29 SF3B1 (ENSOANG00000045106) #30 ANKRD44 (ENSOANG00000040430) #31 PGAP1 (ENSOANG00000038233) #32 GTF3C3 (ENSOANG00000043590) #34 ENSOANG00000050849 #35 HECW2 (ENSOANG00000042120) #36 STK17B (ENSOANG00000047876) #37 Sauria ANCESTRAL SPECIES 32 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 Archelosauria ANCESTRAL SPECIES 8 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 Cryptodira ANCESTRAL SPECIES 5 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 Testudinoidea ANCESTRAL SPECIES 11 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a.r #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 Emydidae ANCESTRAL SPECIES 4 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a.q #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 Three-toed box turtle MODERN SPECIES 25 NDUFB3 (ENSTMTG00000009826) HYCC2 (ENSTMTG00000009797) ORC2 (ENSTMTG00000009760) NIF3L1 (ENSTMTG00000009742) #7 PPIL3 (ENSTMTG00000009721) #8 CLK1 (ENSTMTG00000009691) #9 BZW1 (ENSTMTG00000009663) #10 ENSTMTG00000009541 #13 ENSTMTG00000009481 #13 KCTD18 (ENSTMTG00000009452) #15 SPATS2L (ENSTMTG00000009400) #16 MAIP1 (ENSTMTG00000009374) #17 TYW5 (ENSTMTG00000009344) #18 C2orf69 (ENSTMTG00000009340) #19 FTCDNL1 (ENSTMTG00000009322) #20 SATB2 (ENSTMTG00000009198) #22 PLCL1 (ENSTMTG00000009159) #23 ENSTMTG00000009149 BOLL (ENSTMTG00000009098) #24 RFTN2 (ENSTMTG00000009012) #25 MOB4 (ENSTMTG00000008969) #26 HSPE1 (ENSTMTG00000008952) ##28 HSPD1 (ENSTMTG00000008938) ##27 COQ10B (ENSTMTG00000008923) #29 SF3B1 (ENSTMTG00000008886) #30 ANKRD44 (ENSTMTG00000006527) #31 PGAP1 (ENSTMTG00000006286) #32 GTF3C3 (ENSTMTG00000006246) #34 CCDC150 (ENSTMTG00000006052) #35 HECW2 (ENSTMTG00000005911) #36 STK17B (ENSTMTG00000005873) #37 painted turtle MODERN SPECIES 2 NDUFB3 (ENSCPBG00000011726) HYCC2 (ENSCPBG00000011729) ORC2 (ENSCPBG00000011736) NIF3L1 (ENSCPBG00000011743) #7 PPIL3 (ENSCPBG00000011745) #8 CLK1 (ENSCPBG00000011747) #9 BZW1 (ENSCPBG00000011755) #10 ENSCPBG00000011762 #13 ENSCPBG00000011787 #13 KCTD18 (ENSCPBG00000011796) #15 SPATS2L (ENSCPBG00000011805) #16 MAIP1 (ENSCPBG00000011829) #17 TYW5 (ENSCPBG00000011833) #18 C2orf69 (ENSCPBG00000011840) #19 FTCDNL1 (ENSCPBG00000011843) #20 ENSCPBG00000011848 #22 Testudinidae ANCESTRAL SPECIES 8 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00530000064234.o #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00960000192086 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a.r #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 Goode s thornscrub tortoise MODERN SPECIES 2 HYCC2 (ENSGEVG00005013408) ORC2 (ENSGEVG00005013508) NIF3L1 (ENSGEVG00005013708) #7 PPIL3 (ENSGEVG00005013737) #8 CLK1 (ENSGEVG00005013766) #9 BZW1 (ENSGEVG00005013813) #10 ENSGEVG00005013897 #13 ENSGEVG00005014463 #13 KCTD18 (ENSGEVG00005014582) #15 SPATS2L (ENSGEVG00005014623) #16 MAIP1 (ENSGEVG00005014681) #17 TYW5 (ENSGEVG00005014741) #18 C2orf69 (ENSGEVG00005014762) #19 ENSGEVG00005014793 FTCDNL1 (ENSGEVG00005014851) #20 SATB2 (ENSGEVG00005014931) #22 PLCL1 (ENSGEVG00005015176) #23 ENSGEVG00005015268 BOLL (ENSGEVG00005015320) #24 RFTN2 (ENSGEVG00005015347) #25 MOB4 (ENSGEVG00005015382) #26 ENSGEVG00005015406 ##28 HSPD1 (ENSGEVG00005015419) ##27 COQ10B (ENSGEVG00005015431) #29 SF3B1 (ENSGEVG00005015452) #30 ANKRD44 (ENSGEVG00005015491) #31 PGAP1 (ENSGEVG00005009499) #32 GTF3C3 (ENSGEVG00005010993) #34 CCDC150 (ENSGEVG00005011659) #35 HECW2 (ENSGEVG00005011769) #36 STK17B (ENSGEVG00005012035) #37 Abingdon island giant tortoise MODERN SPECIES 1768 MAIP1 (ENSCABG00000002848) #17 TYW5 (ENSCABG00000002845) #18 C2orf69 (ENSCABG00000002844) #19 ENSCABG00000002842 FTCDNL1 (ENSCABG00000002840) #20 SATB2 (ENSCABG00000002838) #22 PLCL1 (ENSCABG00000002834) #23 Chinese turtle MODERN SPECIES 677 HYCC2 (ENSPSIG00000004753) ORC2 (ENSPSIG00000004159) NIF3L1 (ENSPSIG00000004085) #7 PPIL3 (ENSPSIG00000003967) #8 CLK1 (ENSPSIG00000003762) #9 BZW1 (ENSPSIG00000003613) #10 ENSPSIG00000003574 #13 ENSPSIG00000003565 #13 ENSPSIG00000003550 ENSPSIG00000018142 #13 ENSPSIG00000018140 #14 KCTD18 (ENSPSIG00000018125) #15 ENSPSIG00000018117 #16 TYW5 (ENSPSIG00000018111) #18 C2orf69 (ENSPSIG00000001193) #19 SATB2 (ENSPSIG00000018044) #22 PLCL1 (ENSPSIG00000018022) #23 BOLL (ENSPSIG00000018004) #24 RFTN2 (ENSPSIG00000017989) #25 MOB4 (ENSPSIG00000017978) #26 HSPE1 (ENSPSIG00000017974) ##28 HSPD1 (ENSPSIG00000017889) ##27 COQ10B (ENSPSIG00000017692) #29 SF3B1 (ENSPSIG00000017222) #30 ANKRD44 (ENSPSIG00000015936) #31 C2orf66 (ENSPSIG00000015930) #33 GTF3C3 (ENSPSIG00000015691) #34 CCDC150 (ENSPSIG00000015196) #35 HECW2 (ENSPSIG00000013756) #36 STK17B (ENSPSIG00000013683) #37 ENSPSIG00000013666 Archosauria ANCESTRAL SPECIES 6 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b.j.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 Aves ANCESTRAL SPECIES 8 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b.j.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 Neognathae ANCESTRAL SPECIES 6 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b.j.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 Neognathae_b ANCESTRAL SPECIES 7 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b.j.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 Passeriformes ANCESTRAL SPECIES 6 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000163579 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b.j.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 ENSGT00940000161744 Great tit MODERN SPECIES 27 ENSPMJG00000018178 CASP10 (ENSPMJG00000018177) CFLAR (ENSPMJG00000018176) NDUFB3 (ENSPMJG00000018175) HYCC2 (ENSPMJG00000018174) ORC2 (ENSPMJG00000018173) NIF3L1 (ENSPMJG00000018172) #7 ENSPMJG00000018171 BZW1 (ENSPMJG00000018170) #10 AOX1 (ENSPMJG00000004145) #13 ENSPMJG00000004063 SPATS2L (ENSPMJG00000004053) #16 MAIP1 (ENSPMJG00000004020) #17 TYW5 (ENSPMJG00000004013) #18 C2orf69 (ENSPMJG00000004011) #19 SATB2 (ENSPMJG00000004001) #22 PLCL1 (ENSPMJG00000003985) #23 BOLL (ENSPMJG00000003966) #24 RFTN2 (ENSPMJG00000003955) #25 MOB4 (ENSPMJG00000003952) #26 HSPE1 (ENSPMJG00000003948) ##28 HSPD1 (ENSPMJG00000003936) ##27 COQ10B (ENSPMJG00000003934) #29 SF3B1 (ENSPMJG00000003918) #30 ANKRD44 (ENSPMJG00000003248) #31 PGAP1 (ENSPMJG00000003000) #32 GTF3C3 (ENSPMJG00000000637) #34 HECW2 (ENSPMJG00000000591) #36 STK17B (ENSPMJG00000000570) #37 ENSPMJG00000000562 SLC39A10 (ENSPMJG00000000557) Passeriformes_d ANCESTRAL SPECIES 8 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b.j.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D.c #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 ENSGT00940000161744 Flycatcher MODERN SPECIES 26 CFLAR (ENSFALG00000004136) NDUFB3 (ENSFALG00000004140) HYCC2 (ENSFALG00000004144) ENSFALG00000028144 NIF3L1 (ENSFALG00000024500) #7 PPIL3 (ENSFALG00000023399) #8 BZW1 (ENSFALG00000027684) #10 AOX1 (ENSFALG00000004179) #13 ENSFALG00000025029 #14 KCTD18 (ENSFALG00000004224) #15 SPATS2L (ENSFALG00000004226) #16 MAIP1 (ENSFALG00000026216) #17 TYW5 (ENSFALG00000026401) #18 C2orf69 (ENSFALG00000028312) #19 ENSFALG00000025773 SATB2 (ENSFALG00000004242) #22 PLCL1 (ENSFALG00000004251) #23 BOLL (ENSFALG00000004255) #24 RFTN2 (ENSFALG00000004261) #25 MOB4 (ENSFALG00000004266) #26 HSPE1 (ENSFALG00000025157) ##28 HSPD1 (ENSFALG00000004272) ##27 COQ10B (ENSFALG00000004277) #29 SF3B1 (ENSFALG00000004281) #30 ENSFALG00000004286 #31 PGAP1 (ENSFALG00000004291) #32 C2orf66 (ENSFALG00000004295) #33 GTF3C3 (ENSFALG00000004303) #34 HECW2 (ENSFALG00000004319) #36 STK17B (ENSFALG00000004323) #37 ENSFALG00000004327 Passeriformes_g ANCESTRAL SPECIES 9 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b.j.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D.c #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 ENSGT00940000161744 Passeroidea ANCESTRAL SPECIES 8 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b.j.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D.c #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 ENSGT00940000161744 Zebra finch MODERN SPECIES 29 CASP10 (ENSTGUG00000010306) CFLAR (ENSTGUG00000010309) NDUFB3 (ENSTGUG00000027597) HYCC2 (ENSTGUG00000023035) BZW1 (ENSTGUG00000010398) #10 ORC2 (ENSTGUG00000010352) NIF3L1 (ENSTGUG00000010385) #7 PPIL3 (ENSTGUG00000010395) #8 AOX1 (ENSTGUG00000010409) #13 ENSTGUG00000010459 #14 ENSTGUG00000024909 #15 SPATS2L (ENSTGUG00000010462) #16 MAIP1 (ENSTGUG00000010466) #17 TYW5 (ENSTGUG00000010474) #18 C2orf69 (ENSTGUG00000028654) #19 SATB2 (ENSTGUG00000010480) #22 PLCL1 (ENSTGUG00000010492) #23 BOLL (ENSTGUG00000010496) #24 RFTN2 (ENSTGUG00000010512) #25 MOB4 (ENSTGUG00000027293) #26 HSPE1 (ENSTGUG00000020798) ##28 HSPD1 (ENSTGUG00000010538) ##27 COQ10B (ENSTGUG00000010549) #29 SF3B1 (ENSTGUG00000010553) #30 ANKRD44 (ENSTGUG00000010567) #31 PGAP1 (ENSTGUG00000010613) #32 C2orf66 (ENSTGUG00000010629) #33 GTF3C3 (ENSTGUG00000010631) #34 HECW2 (ENSTGUG00000010653) #36 STK17B (ENSTGUG00000010679) #37 SLC39A10 (ENSTGUG00000010699) Common canary MODERN SPECIES 8 ENSSCAG00000002679 CASP10 (ENSSCAG00000002684) CFLAR (ENSSCAG00000002692) NDUFB3 (ENSSCAG00000002696) HYCC2 (ENSSCAG00000002703) ORC2 (ENSSCAG00000002715) NIF3L1 (ENSSCAG00000002725) #7 PPIL3 (ENSSCAG00000002731) #8 BZW1 (ENSSCAG00000002739) #10 AOX1 (ENSSCAG00000002748) #13 ENSSCAG00000002760 #14 SPATS2L (ENSSCAG00000002770) #16 MAIP1 (ENSSCAG00000002783) #17 TYW5 (ENSSCAG00000002800) #18 C2orf69 (ENSSCAG00000002803) #19 SATB2 (ENSSCAG00000002810) #22 PLCL1 (ENSSCAG00000002820) #23 BOLL (ENSSCAG00000002826) #24 RFTN2 (ENSSCAG00000002834) #25 MOB4 (ENSSCAG00000002843) #26 HSPE1 (ENSSCAG00000002849) ##28 HSPD1 (ENSSCAG00000002857) ##27 COQ10B (ENSSCAG00000002862) #29 SF3B1 (ENSSCAG00000002869) #30 ANKRD44 (ENSSCAG00000002900) #31 PGAP1 (ENSSCAG00000002970) #32 GTF3C3 (ENSSCAG00000003067) #34 HECW2 (ENSSCAG00000003082) #36 STK17B (ENSSCAG00000003100) #37 ENSSCAG00000003138 SLC39A10 (ENSSCAG00000003118) Medium ground finch MODERN SPECIES 1 CASP8 (ENSGFOG00000000120) ENSGFOG00000000126 CASP10 (ENSGFOG00000000131) CFLAR (ENSGFOG00000000133) NDUFB3 (ENSGFOG00000000135) HYCC2 (ENSGFOG00000000137) ORC2 (ENSGFOG00000000142) NIF3L1 (ENSGFOG00000000152) #7 PPIL3 (ENSGFOG00000000157) #8 BZW1 (ENSGFOG00000000164) #10 AOX1 (ENSGFOG00000000189) #13 SPATS2L (ENSGFOG00000000276) #16 MAIP1 (ENSGFOG00000000285) #17 TYW5 (ENSGFOG00000000292) #18 C2orf69 (ENSGFOG00000000297) #19 SATB2 (ENSGFOG00000000304) #22 PLCL1 (ENSGFOG00000000319) #23 BOLL (ENSGFOG00000000330) #24 RFTN2 (ENSGFOG00000000339) #25 MOB4 (ENSGFOG00000000351) #26 HSPE1 (ENSGFOG00000000358) ##28 HSPD1 (ENSGFOG00000000363) ##27 COQ10B (ENSGFOG00000000371) #29 SF3B1 (ENSGFOG00000000377) #30 ANKRD44 (ENSGFOG00000000465) #31 PGAP1 (ENSGFOG00000001016) #32 C2orf66 (ENSGFOG00000001182) #33 GTF3C3 (ENSGFOG00000001187) #34 HECW2 (ENSGFOG00000001246) #36 STK17B (ENSGFOG00000001718) #37 ENSGFOG00000001726 Neognathae_c ANCESTRAL SPECIES 9 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 ENSGT00940000155282 Kakapo MODERN SPECIES 22 CASP10 (ENSSHBG00005021045) NDUFB3 (ENSSHBG00005021043) HYCC2 (ENSSHBG00005021042) ORC2 (ENSSHBG00005021041) NIF3L1 (ENSSHBG00005021038) #7 PPIL3 (ENSSHBG00005021034) #8 CLK1 (ENSSHBG00005021033) #9 BZW1 (ENSSHBG00005021029) #10 ENSSHBG00005020922 #13 ENSSHBG00005019636 #13 KCTD18 (ENSSHBG00005019425) #15 SPATS2L (ENSSHBG00005019422) #16 MAIP1 (ENSSHBG00005019417) #17 TYW5 (ENSSHBG00005019414) #18 C2orf69 (ENSSHBG00005019413) #19 SATB2 (ENSSHBG00005019410) #22 PLCL1 (ENSSHBG00005019405) #23 BOLL (ENSSHBG00005019392) #24 RFTN2 (ENSSHBG00005019386) #25 MOB4 (ENSSHBG00005019383) #26 HSPE1 (ENSSHBG00005019379) ##28 HSPD1 (ENSSHBG00005019373) ##27 COQ10B (ENSSHBG00005019365) #29 SF3B1 (ENSSHBG00005019352) #30 ANKRD44 (ENSSHBG00005018394) #31 PGAP1 (ENSSHBG00005018304) #32 GTF3C3 (ENSSHBG00005018293) #34 ENSSHBG00005018286 ENSSHBG00005018282 HECW2 (ENSSHBG00005018269) #36 STK17B (ENSSHBG00005018259) #37 Golden eagle MODERN SPECIES 22 CFLAR (ENSACCG00020002739) NDUFB3 (ENSACCG00020002722) HYCC2 (ENSACCG00020002702) ORC2 (ENSACCG00020002685) NIF3L1 (ENSACCG00020002663) #7 ENSACCG00020002651 CLK1 (ENSACCG00020002621) #9 BZW1 (ENSACCG00020002605) #10 ENSACCG00020002563 #13 ENSACCG00020002495 #13 KCTD18 (ENSACCG00020002434) #15 SPATS2L (ENSACCG00020002416) #16 MAIP1 (ENSACCG00020002401) #17 TYW5 (ENSACCG00020002393) #18 C2orf69 (ENSACCG00020002380) #19 SATB2 (ENSACCG00020002371) #22 PLCL1 (ENSACCG00020002350) #23 BOLL (ENSACCG00020002330) #24 RFTN2 (ENSACCG00020002295) #25 MOB4 (ENSACCG00020002267) #26 HSPE1 (ENSACCG00020002252) ##28 HSPD1 (ENSACCG00020002238) ##27 COQ10B (ENSACCG00020002215) #29 SF3B1 (ENSACCG00020002196) #30 ANKRD44 (ENSACCG00020002129) #31 PGAP1 (ENSACCG00020002045) #32 GTF3C3 (ENSACCG00020001980) #34 ENSACCG00020001942 #35 HECW2 (ENSACCG00020001818) #36 STK17B (ENSACCG00020001688) #37 ENSACCG00020001679 Galloanserae ANCESTRAL SPECIES 7 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b.j.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 ENSGT00940000161744 Anatidae ANCESTRAL SPECIES 10 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT01090000261922 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 ENSGT00940000155282 Pink-footed goose MODERN SPECIES 18 ENSABRG00000008007 MAIP1 (ENSABRG00000008014) #17 TYW5 (ENSABRG00000008024) #18 C2orf69 (ENSABRG00000008031) #19 SATB2 (ENSABRG00000008058) #22 PLCL1 (ENSABRG00000008112) #23 BOLL (ENSABRG00000008146) #24 RFTN2 (ENSABRG00000008189) #25 MOB4 (ENSABRG00000008210) #26 ENSABRG00000008219 HSPE1 (ENSABRG00000008221) ##28 HSPD1 (ENSABRG00000008240) ##27 COQ10B (ENSABRG00000008578) #29 SF3B1 (ENSABRG00000008654) #30 ANKRD44 (ENSABRG00000009757) #31 PGAP1 (ENSABRG00000012531) #32 GTF3C3 (ENSABRG00000012719) #34 HECW2 (ENSABRG00000012968) #36 STK17B (ENSABRG00000013421) #37 DNAH7 (ENSABRG00000013699) Duck MODERN SPECIES 25 CASP8 (ENSAPLG00000014872) ENSAPLG00000015210 CASP10 (ENSAPLG00000015244) CFLAR (ENSAPLG00000015311) NDUFB3 (ENSAPLG00000015508) HYCC2 (ENSAPLG00000015610) NIF3L1 (ENSAPLG00000015875) #7 PPIL3 (ENSAPLG00000015961) #8 CLK1 (ENSAPLG00000016010) #9 BZW1 (ENSAPLG00000016194) #10 AOX1 (ENSAPLG00000008708) #13 SPATS2L (ENSAPLG00000008552) #16 MAIP1 (ENSAPLG00000008514) #17 TYW5 (ENSAPLG00000008413) #18 C2orf69 (ENSAPLG00000000922) #19 SATB2 (ENSAPLG00000008131) #22 PLCL1 (ENSAPLG00000006530) #23 BOLL (ENSAPLG00000006193) #24 RFTN2 (ENSAPLG00000005755) #25 MOB4 (ENSAPLG00000019077) #26 SF3B1 (ENSAPLG00000003993) #30 ANKRD44 (ENSAPLG00000002803) #31 PGAP1 (ENSAPLG00000001884) #32 GTF3C3 (ENSAPLG00000016020) #34 ENSAPLG00000015999 HECW2 (ENSAPLG00000015383) #36 STK17B (ENSAPLG00000015076) #37 ENSAPLG00000022933 ENSAPLG00000026608 ENSAPLG00000015074 ENSAPLG00000013720 Phasianidae ANCESTRAL SPECIES 8 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b.j.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 ENSGT00940000161744 Phasianidae_b ANCESTRAL SPECIES 8 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b.j.a #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000009468 #33 ENSGT00390000016929 #34 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 ENSGT00940000161744 Chicken MODERN SPECIES 36 NDUFB3 (ENSGALG00010024869) HYCC2 (ENSGALG00010024845) ORC2 (ENSGALG00010024830) NIF3L1 (ENSGALG00010024811) #7 PPIL3 (ENSGALG00010024807) #8 CLK1 (ENSGALG00010024803) #9 BZW1 (ENSGALG00010024792) #10 AOX2 (ENSGALG00010024771) #13 AOX1 (ENSGALG00010024731) #13 ENSGALG00010024213 #14 KCTD18 (ENSGALG00010024207) #15 SPATS2L (ENSGALG00010024075) #16 MAIP1 (ENSGALG00010024020) #17 TYW5 (ENSGALG00010023968) #18 C2orf69 (ENSGALG00010023884) #19 SATB2 (ENSGALG00010023831) #22 PLCL1 (ENSGALG00010015218) #23 BOLL (ENSGALG00010015152) #24 RFTN2 (ENSGALG00010015133) #25 MOB4 (ENSGALG00010015100) #26 HSPE1 (ENSGALG00010015092) ##28 HSPD1 (ENSGALG00010015069) ##27 COQ10B (ENSGALG00010015043) #29 SF3B1 (ENSGALG00010010748) #30 ANKRD44 (ENSGALG00010010988) #31 PGAP1 (ENSGALG00010010973) #32 C7H2ORF66 (ENSGALG00010010961) #33 GTF3C3 (ENSGALG00010010955) #34 HECW2 (ENSGALG00010010928) #36 STK17B (ENSGALG00010010908) #37 ENSGALG00010010895 Turkey MODERN SPECIES 27 HYCC2 (ENSMGAG00000007746) ORC2 (ENSMGAG00000007673) NIF3L1 (ENSMGAG00000007653) #7 PPIL3 (ENSMGAG00000007648) #8 CLK1 (ENSMGAG00000007598) #9 BZW1 (ENSMGAG00000007562) #10 ENSMGAG00000020945 #13 AOX1 (ENSMGAG00000007252) #13 ENSMGAG00000007247 #14 ENSMGAG00000007215 #15 ENSMGAG00000021622 #15 SPATS2L (ENSMGAG00000007229) #16 MAIP1 (ENSMGAG00000007211) #17 TYW5 (ENSMGAG00000007194) #18 C2orf69 (ENSMGAG00000007191) #19 SATB2 (ENSMGAG00000007173) #22 ENSMGAG00000007167 #23 BOLL (ENSMGAG00000020859) #24 RFTN2 (ENSMGAG00000007142) #25 MOB4 (ENSMGAG00000007119) #26 HSPE1 (ENSMGAG00000007107) ##28 HSPD1 (ENSMGAG00000007073) ##27 COQ10B (ENSMGAG00000007063) #29 SF3B1 (ENSMGAG00000007017) #30 ANKRD44 (ENSMGAG00000006933) #31 PGAP1 (ENSMGAG00000006871) #32 C2orf66 (ENSMGAG00000006869) #33 GTF3C3 (ENSMGAG00000006840) #34 HECW2 (ENSMGAG00000006790) #36 STK17B (ENSMGAG00000016466) #37 ENSMGAG00000006729 Japanese quail MODERN SPECIES 25 ENSCJPG00005015243 CFLAR (ENSCJPG00005015242) NDUFB3 (ENSCJPG00005015241) HYCC2 (ENSCJPG00005015237) ORC2 (ENSCJPG00005015236) PPIL3 (ENSCJPG00005015235) #8 NIF3L1 (ENSCJPG00005015111) #7 CLK1 (ENSCJPG00005015110) #9 BZW1 (ENSCJPG00005015109) #10 AOX1 (ENSCJPG00005014163) #13 KCTD18 (ENSCJPG00005014162) #15 SPATS2L (ENSCJPG00005014161) #16 ENSCJPG00005014159 #17 TYW5 (ENSCJPG00005014158) #18 C2orf69 (ENSCJPG00005014157) #19 SATB2 (ENSCJPG00005014156) #22 PLCL1 (ENSCJPG00005014151) #23 BOLL (ENSCJPG00005014150) #24 RFTN2 (ENSCJPG00005014149) #25 MOB4 (ENSCJPG00005014148) #26 ENSCJPG00005014146 COL6A3 (ENSCJPG00005014145) MLPH (ENSCJPG00005014101) PRLH (ENSCJPG00005014089) RAB17 (ENSCJPG00005014087) LRRFIP1 (ENSCJPG00005014059) RAMP1 (ENSCJPG00005014050) UBE2F (ENSCJPG00005014047) ENSCJPG00005014041 ENSCJPG00005014038 MREG (ENSCJPG00005014036) African ostrich MODERN SPECIES 190 TYW5 (ENSSCUG00000001155) #18 C2orf69 (ENSSCUG00000001156) #19 SATB2 (ENSSCUG00000001157) #22 PLCL1 (ENSSCUG00000001166) #23 BOLL (ENSSCUG00000001167) #24 RFTN2 (ENSSCUG00000001170) #25 MOB4 (ENSSCUG00000001173) #26 HSPE1 (ENSSCUG00000001176) ##28 HSPD1 (ENSSCUG00000001178) ##27 COQ10B (ENSSCUG00000001180) #29 SF3B1 (ENSSCUG00000001181) #30 ANKRD44 (ENSSCUG00000001187) #31 PGAP1 (ENSSCUG00000001197) #32 C2orf66 (ENSSCUG00000001199) #33 GTF3C3 (ENSSCUG00000001201) #34 CCDC150 (ENSSCUG00000001205) #35 HECW2 (ENSSCUG00000001213) #36 STK17B (ENSSCUG00000001218) #37 Australian saltwater crocodile MODERN SPECIES 66 ORC2 (ENSCPRG00005008409) NIF3L1 (ENSCPRG00005008503) #7 PPIL3 (ENSCPRG00005008579) #8 CLK1 (ENSCPRG00005008601) #9 BZW1 (ENSCPRG00005008656) #10 ENSCPRG00005008919 #13 ENSCPRG00005009153 #13 ENSCPRG00005009165 #13 ENSCPRG00005009184 #13 ENSCPRG00005009193 #13 KCTD18 (ENSCPRG00005009197) #15 SPATS2L (ENSCPRG00005009201) #16 TYW5 (ENSCPRG00005009213) #18 C2orf69 (ENSCPRG00005009215) #19 FTCDNL1 (ENSCPRG00005009218) #20 SATB2 (ENSCPRG00005009227) #22 ENSCPRG00005009240 PLCL1 (ENSCPRG00005009250) #23 BOLL (ENSCPRG00005009258) #24 RFTN2 (ENSCPRG00005009261) #25 MOB4 (ENSCPRG00005009263) #26 ENSCPRG00005009267 ##28 HSPD1 (ENSCPRG00005009268) ##27 COQ10B (ENSCPRG00005009291) #29 SF3B1 (ENSCPRG00005009298) #30 ANKRD44 (ENSCPRG00005009315) #31 PGAP1 (ENSCPRG00005009330) #32 GTF3C3 (ENSCPRG00005009426) #34 CCDC150 (ENSCPRG00005009675) #35 HECW2 (ENSCPRG00005009692) #36 STK17B (ENSCPRG00005009733) #37 Lepidosauria ANCESTRAL SPECIES 7 ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b #14 ENSGT00390000004840 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 ENSGT00940000155466 #36 Episquamata ANCESTRAL SPECIES ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b #14 ENSGT00390000004840 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 ENSGT00940000155466 #36 Laterata ANCESTRAL SPECIES 42 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000153189.B #8 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT01030000235401 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 Common wall lizard MODERN SPECIES ORC2 (ENSPMRG00000002871) NIF3L1 (ENSPMRG00000002889) #7 PPIL3 (ENSPMRG00000002900) #8 CLK1 (ENSPMRG00000002909) #9 BZW1 (ENSPMRG00000002917) #10 ENSPMRG00000003375 #13 ENSPMRG00000005111 ENSPMRG00000005124 #13 KCTD18 (ENSPMRG00000005144) #15 SPATS2L (ENSPMRG00000005149) #16 ENSPMRG00000005158 MAIP1 (ENSPMRG00000005161) #17 TYW5 (ENSPMRG00000005165) #18 C2orf69 (ENSPMRG00000005171) #19 FTCDNL1 (ENSPMRG00000005176) #20 SATB2 (ENSPMRG00000005180) #22 ENSPMRG00000005184 PLCL1 (ENSPMRG00000005188) #23 BOLL (ENSPMRG00000005191) #24 RFTN2 (ENSPMRG00000005194) #25 MOB4 (ENSPMRG00000005201) #26 ENSPMRG00000005210 ##28 ENSPMRG00000005220 ##27 COQ10B (ENSPMRG00000005252) #29 SF3B1 (ENSPMRG00000005261) #30 ANKRD44 (ENSPMRG00000005384) #31 PGAP1 (ENSPMRG00000006002) #32 GTF3C3 (ENSPMRG00000006178) #34 ENSPMRG00000006458 #35 MPP4 (ENSPMRG00000006532) ALS2 (ENSPMRG00000006747) Argentine black and white tegu MODERN SPECIES 12 ORC2 (ENSSMRG00000020017) NIF3L1 (ENSSMRG00000020018) #7 PPIL3 (ENSSMRG00000020020) #8 MKS1 (ENSSMRG00000020026) ENSSMRG00000020027 CLK1 (ENSSMRG00000020029) #9 BZW1 (ENSSMRG00000020030) #10 ENSSMRG00000020046 #13 ENSSMRG00000020241 #13 KCTD18 (ENSSMRG00000020242) #15 SPATS2L (ENSSMRG00000020243) #16 MAIP1 (ENSSMRG00000020245) #17 TYW5 (ENSSMRG00000020247) #18 C2orf69 (ENSSMRG00000020249) #19 FTCDNL1 (ENSSMRG00000020252) #20 SATB2 (ENSSMRG00000020256) #22 ENSSMRG00000020259 PLCL1 (ENSSMRG00000020260) #23 ENSSMRG00000020262 ENSSMRG00000020263 #24 RFTN2 (ENSSMRG00000020265) #25 MOB4 (ENSSMRG00000020267) #26 HSPE1 (ENSSMRG00000020269) ##28 HSPD1 (ENSSMRG00000020273) ##27 COQ10B (ENSSMRG00000020275) #29 SF3B1 (ENSSMRG00000020276) #30 ANKRD44 (ENSSMRG00000020279) #31 PGAP1 (ENSSMRG00000020281) #32 CFLAR (ENSSMRG00000020283) ENSSMRG00000020284 TRAK2 (ENSSMRG00000020286) Toxicofera ANCESTRAL SPECIES ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000163579 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00950000183114.a.b.b.c.a #13 ENSGT00940000154107.b #14 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 Lizard MODERN SPECIES 957 CREB1 (ENSACAG00000009672) METTL21A (ENSACAG00000009731) ENSACAG00000009752 ENSACAG00000040464 ENSACAG00000009794 PLEKHM3 (ENSACAG00000009797) ENSACAG00000000254 C2orf69 (ENSACAG00000011226) #19 ENSACAG00000034897 ENSACAG00000029096 #20 SATB2 (ENSACAG00000009821) #22 Elapidae ANCESTRAL SPECIES ENSGT00530000064199.k ENSGT00530000064199.l ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000163579 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393 #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 ENSGT00940000155466 #36 ENSGT00940000154014.b.b #37 Indian cobra DUPLICATION Indian cobra MODERN SPECIES CFLAR (ENSNNAG00000009607) NDUFB3 (ENSNNAG00000009702) HYCC2 (ENSNNAG00000009742) ORC2 (ENSNNAG00000009852) NIF3L1 (ENSNNAG00000009910) #7 ENSNNAG00000009941 CLK1 (ENSNNAG00000009956) #9 BZW1 (ENSNNAG00000010016) #10 AOX1 (ENSNNAG00000010279) #13 KCTD18 (ENSNNAG00000014023) #15 SPATS2L (ENSNNAG00000014040) #16 MAIP1 (ENSNNAG00000014058) #17 TYW5 (ENSNNAG00000014077) #18 C2orf69 (ENSNNAG00000006692) #19 ENSNNAG00000006700 #22 ENSNNAG00000006717 #22 PLCL1 (ENSNNAG00000006743) #23 BOLL (ENSNNAG00000006909) #24 RFTN2 (ENSNNAG00000006926) #25 MOB4 (ENSNNAG00000006969) #26 HSPE1 (ENSNNAG00000006995) ##28 HSPD1 (ENSNNAG00000007012) ##27 COQ10B (ENSNNAG00000007040) #29 SF3B1 (ENSNNAG00000007064) #30 ANKRD44 (ENSNNAG00000007131) #31 PGAP1 (ENSNNAG00000007275) #32 GTF3C3 (ENSNNAG00000007525) #34 CCDC150 (ENSNNAG00000007636) #35 HECW2 (ENSNNAG00000007893) #36 STK17B (ENSNNAG00000008143) #37 ENSNNAG00000008194 Indian cobra MODERN SPECIES CASP10 (ENSNNAG00000009584) CFLAR (ENSNNAG00000009607) NDUFB3 (ENSNNAG00000009702) HYCC2 (ENSNNAG00000009742) ORC2 (ENSNNAG00000009852) NIF3L1 (ENSNNAG00000009910) #7 ENSNNAG00000009941 CLK1 (ENSNNAG00000009956) #9 BZW1 (ENSNNAG00000010016) #10 AOX1 (ENSNNAG00000010279) #13 KCTD18 (ENSNNAG00000014023) #15 SPATS2L (ENSNNAG00000014040) #16 MAIP1 (ENSNNAG00000014058) #17 TYW5 (ENSNNAG00000014077) #18 C2orf69 (ENSNNAG00000006692) #19 ENSNNAG00000006700 #22 ENSNNAG00000006717 #22 PLCL1 (ENSNNAG00000006743) #23 BOLL (ENSNNAG00000006909) #24 RFTN2 (ENSNNAG00000006926) #25 MOB4 (ENSNNAG00000006969) #26 HSPE1 (ENSNNAG00000006995) ##28 HSPD1 (ENSNNAG00000007012) ##27 COQ10B (ENSNNAG00000007040) #29 SF3B1 (ENSNNAG00000007064) #30 ANKRD44 (ENSNNAG00000007131) #31 PGAP1 (ENSNNAG00000007275) #32 GTF3C3 (ENSNNAG00000007525) #34 CCDC150 (ENSNNAG00000007636) #35 HECW2 (ENSNNAG00000007893) #36 STK17B (ENSNNAG00000008143) #37 Elapidae_a ANCESTRAL SPECIES 5 ENSGT00530000064199.k ENSGT00530000064199.l ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000163579 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393.e #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 ENSGT00940000155466.g #36 ENSGT00940000154014.b.b #37 Blue-lipped sea krait MODERN SPECIES 579 SATB2 (ENSLLTG00000006991) #22 Acanthophiinae ANCESTRAL SPECIES 7 ENSGT00530000064199.k ENSGT00530000064199.l ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 #7 ENSGT00940000163579 ENSGT00940000159722 #9 ENSGT00390000012561.b #10 ENSGT00950000183114.a.b.b.c.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 ENSGT00530000063480.a #24 ENSGT00530000063609.a #25 ENSGT01050000244956.b #26 ENSGT00390000006350.n ##28 ENSGT00390000005727.b ##27 ENSGT00940000155367 #29 ENSGT00390000018393.e #30 ENSGT00950000182908.D #31 ENSGT00390000016484 #32 ENSGT00390000016929 #34 ENSGT00390000005285 #35 ENSGT00940000167666 ENSGT00940000155466.g #36 ENSGT00940000154014.b.b #37 Eastern brown snake MODERN SPECIES 7 ENSPTXG00000002638 ENSPTXG00000002639 NDUFB3 (ENSPTXG00000002643) HYCC2 (ENSPTXG00000002649) ORC2 (ENSPTXG00000002651) NIF3L1 (ENSPTXG00000002654) #7 ENSPTXG00000002657 CLK1 (ENSPTXG00000002661) #9 BZW1 (ENSPTXG00000002667) #10 AOX1 (ENSPTXG00000002704) #13 KCTD18 (ENSPTXG00000004060) #15 SPATS2L (ENSPTXG00000004073) #16 MAIP1 (ENSPTXG00000004416) #17 TYW5 (ENSPTXG00000004418) #18 C2orf69 (ENSPTXG00000004419) #19 ENSPTXG00000004420 #22 ENSPTXG00000004422 PLCL1 (ENSPTXG00000004423) #23 BOLL (ENSPTXG00000004425) #24 RFTN2 (ENSPTXG00000004427) #25 MOB4 (ENSPTXG00000004429) #26 HSPE1 (ENSPTXG00000004431) ##28 HSPD1 (ENSPTXG00000004432) ##27 COQ10B (ENSPTXG00000004434) #29 SF3B1 (ENSPTXG00000004437) #30 ANKRD44 (ENSPTXG00000004451) #31 PGAP1 (ENSPTXG00000006428) #32 GTF3C3 (ENSPTXG00000006430) #34 ENSPTXG00000006456 #35 ENSPTXG00000006457 HECW2 (ENSPTXG00000006458) #36 Mainland tiger snake MODERN SPECIES 21 ENSNSUG00000013078 ENSNSUG00000013079 NDUFB3 (ENSNSUG00000013082) HYCC2 (ENSNSUG00000013085) ORC2 (ENSNSUG00000013192) NIF3L1 (ENSNSUG00000013193) #7 ENSNSUG00000013194 CLK1 (ENSNSUG00000013195) #9 BZW1 (ENSNSUG00000013196) #10 AOX1 (ENSNSUG00000013197) #13 KCTD18 (ENSNSUG00000013750) #15 SPATS2L (ENSNSUG00000013759) #16 MAIP1 (ENSNSUG00000013760) #17 TYW5 (ENSNSUG00000013761) #18 C2orf69 (ENSNSUG00000013762) #19 SATB2 (ENSNSUG00000013763) #22 PLCL1 (ENSNSUG00000013764) #23 BOLL (ENSNSUG00000013765) #24 RFTN2 (ENSNSUG00000013801) #25 MOB4 (ENSNSUG00000013835) #26 HSPE1 (ENSNSUG00000013836) ##28 HSPD1 (ENSNSUG00000013837) ##27 COQ10B (ENSNSUG00000013838) #29 SF3B1 (ENSNSUG00000013840) #30 ANKRD44 (ENSNSUG00000013841) #31 PGAP1 (ENSNSUG00000013842) #32 GTF3C3 (ENSNSUG00000013843) #34 ENSNSUG00000013869 #35 HECW2 (ENSNSUG00000013870) #36 STK17B (ENSNSUG00000013871) #37 DNAH7 (ENSNSUG00000013876) tuatara MODERN SPECIES 1814 ORC2 (ENSSPUG00000003152) NIF3L1 (ENSSPUG00000003130) #7 PPIL3 (ENSSPUG00000003113) #8 CLK1 (ENSSPUG00000003057) #9 BZW1 (ENSSPUG00000003041) #10 ENSSPUG00000002295 #13 ENSSPUG00000001860 #13 ENSSPUG00000001654 #13 KCTD18 (ENSSPUG00000001600) #15 ENSSPUG00000001587 SPATS2L (ENSSPUG00000001564) #16 MAIP1 (ENSSPUG00000001474) #17 TYW5 (ENSSPUG00000001453) #18 C2orf69 (ENSSPUG00000001446) #19 FTCDNL1 (ENSSPUG00000001397) #20 SATB2 (ENSSPUG00000001263) #22 Anura ANCESTRAL SPECIES 303 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #17 ENSGT00940000158493 #18 ENSGT00390000005550 #19 ENSGT00390000005581.b #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #23 Frog MODERN SPECIES 9 bmpr2 (ENSXETG00000022074) fam117b (ENSXETG00000022076) wdr12 (ENSXETG00000022077) carf (ENSXETG00000031604) nbeal1 (ENSXETG00000022086) dnah7 (ENSXETG00000022093) slc39a10 (ENSXETG00000022134) aox1 (ENSXETG00000034468) ##13 ENSXETG00000039500 #13 aox1 (ENSXETG00000022155) ##13 spats2l (ENSXETG00000041119) #16 tyw5 (ENSXETG00000031428) #18 maip1 (ENSXETG00000025128) #17 c2orf69 (ENSXETG00000018287) #19 XB5818974 [provisional] (ENSXETG00000018288) #20 satb2 (ENSXETG00000035931) #22 plcl1 (ENSXETG00000032204) #23 ENSXETG00000045773 ENSXETG00000031296 tmem237 (ENSXETG00000027500) flacc1 (ENSXETG00000035925) trak2 (ENSXETG00000032904) casc3 (ENSXETG00000004143) casp8 (ENSXETG00000032748) ENSXETG00000041051 resf1 (ENSXETG00000004145) cflar (ENSXETG00000033867) bzw1 (ENSXETG00000030733) #10 orc2 (ENSXETG00000004151) c9orf64 (ENSXETG00000030274) c9orf64 (ENSXETG00000004152) Leishan spiny toad MODERN SPECIES 10 C9orf64 (ENSLLEG00000021144) ENSLLEG00000021218 ENSLLEG00000021462 #10 ENSLLEG00000021830 ##13 ENSLLEG00000022457 ##13 ENSLLEG00000022845 ##13 ENSLLEG00000024214 #13 ENSLLEG00000024411 ##13 KCTD18 (ENSLLEG00000024654) #15 ENSLLEG00000024716 #16 ENSLLEG00000024809 #17 TYW5 (ENSLLEG00000024861) #18 C2orf69 (ENSLLEG00000024970) #19 ENSLLEG00000024996 #20 ENSLLEG00000025021 SATB2 (ENSLLEG00000025046) #22 PLCL1 (ENSLLEG00000025184) #23 MAP3K13 (ENSLLEG00000025313) TMEM41A (ENSLLEG00000025433) EHHADH (ENSLLEG00000025485) C3orf70 (ENSLLEG00000025562) VPS8 (ENSLLEG00000025606) DBR1 (ENSLLEG00000025945) ENSLLEG00000026077 ENSLLEG00000026233 ARMC8 (ENSLLEG00000026719) ENSLLEG00000027635 ADPRH (ENSLLEG00000005739) ENSLLEG00000005810 LRRC3 (ENSLLEG00000005820) ENSLLEG00000005849