Sarcopterygii ANCESTRAL SPECIES 73 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350 #29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 ENSGT00940000155282 ENSGT00940000160335 Tetrapoda ANCESTRAL SPECIES 6 ENSGT00940000160319 ENSGT00940000164225 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b #12 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350 #29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 ENSGT00940000155282 ENSGT00940000160335 Amniota ANCESTRAL SPECIES 6 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a #29 ENSGT00940000167249 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Mammalia ANCESTRAL SPECIES 6 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.b ##29 ENSGT00390000005727.a.b #30 ENSGT00940000167249 ENSGT00390000006350.m.a #29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 Theria ANCESTRAL SPECIES 5 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.b ##29 ENSGT00390000005727.a.b #30 ENSGT00940000167249 ENSGT00390000006350.m.a #29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 Eutheria ANCESTRAL SPECIES 10 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.b #29 ENSGT00390000005727.a.b.a.b #30 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 Boreoeutheria ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.b.a.b ##29 ENSGT00390000005727.a.b.a.b #30 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 Euarchontoglires ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.b.b #29 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.b ##29 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Glires ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Rodentia ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Rodentia_A ANCESTRAL SPECIES 13 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00390000006350.m.a.c.b.b #29 ENSGT00390000005727.a.b.a.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Hystricomorpha ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.b.b #29 ENSGT00390000005727.a.b.a.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 Naked mole-rat female MODERN SPECIES 22 PPIL3 (ENSHGLG00000035729) #7 Clk1 (ENSHGLG00000011322) #8 BZW1 (ENSHGLG00000011961) #9 ENSHGLG00000012205 #10 Aox4 (ENSHGLG00000012471) #11 AOX1 (ENSHGLG00000012876) #12 SGO2 (ENSHGLG00000015359) #13 ENSHGLG00000047532 #14 ENSHGLG00000015370 #15 SPATS2L (ENSHGLG00000015420) #16 ENSHGLG00000017615 #17 MAIP1 (ENSHGLG00000017548) #18 TYW5 (ENSHGLG00000017557) #19 C2orf69 (ENSHGLG00000040936) #20 ENSHGLG00000020697 #21 SATB2 (ENSHGLG00000015892) #22 ENSHGLG00000043283 #23 PLCL1 (ENSHGLG00000015970) #24 BOLL (ENSHGLG00000017562) #25 MARS2 (ENSHGLG00000049320) #26 RFTN2 (ENSHGLG00000017636) #27 MOB4 (ENSHGLG00000050196) #28 ENSHGLG00000042669 #29 HSPD1 (ENSHGLG00000007927) #30 ENSHGLG00000038699 #31 ENSHGLG00000008285 #32 ANKRD44 (ENSHGLG00000008625) #33 ENSHGLG00000049153 #34 ENSHGLG00000040344 #35 ENSHGLG00000008965 #36 ENSHGLG00000042696 #37 Hystricomorpha_a ANCESTRAL SPECIES 17 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.b.b #29 ENSGT00390000005727.a.b.a.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 Hystricomorpha_b ANCESTRAL SPECIES 24 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.b.b.a.b #29 ENSGT00390000005727.a.b.a.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 Degu MODERN SPECIES 66 ENSODEG00000007860 ORC2 (ENSODEG00000008853) NIF3L1 (ENSODEG00000008894) PPIL3 (ENSODEG00000007592) #7 CLK1 (ENSODEG00000009021) #8 ENSODEG00000019563 ENSODEG00000008411 #9 ENSODEG00000008135 #10 ENSODEG00000011138 #11 AOX1 (ENSODEG00000012914) #12 ENSODEG00000009211 #15 SPATS2L (ENSODEG00000009851) #16 MAIP1 (ENSODEG00000008914) #18 TYW5 (ENSODEG00000009836) #19 C2orf69 (ENSODEG00000008700) #20 SATB2 (ENSODEG00000008383) #22 PLCL1 (ENSODEG00000008918) #24 BOLL (ENSODEG00000008471) #25 RFTN2 (ENSODEG00000008704) #27 MOB4 (ENSODEG00000009609) #28 ENSODEG00000019874 ENSODEG00000011397 #29 ENSODEG00000009026 #30 COQ10B (ENSODEG00000008396) #31 ENSODEG00000011153 #32 ENSODEG00000019820 ENSODEG00000008898 #33 ENSODEG00000008698 ENSODEG00000009525 PGAP1 (ENSODEG00000009932) #36 ENSODEG00000009843 Long-tailed chinchilla MODERN SPECIES 110 HYCC2 (ENSCLAG00000011177) ORC2 (ENSCLAG00000013209) NIF3L1 (ENSCLAG00000013524) PPIL3 (ENSCLAG00000014050) #7 CLK1 (ENSCLAG00000011455) #8 BZW1 (ENSCLAG00000012079) #9 ENSCLAG00000011199 #10 ENSCLAG00000014402 #11 AOX1 (ENSCLAG00000011481) #12 ENSCLAG00000012456 #13 ENSCLAG00000014377 #15 SPATS2L (ENSCLAG00000013167) #16 MAIP1 (ENSCLAG00000011913) #18 TYW5 (ENSCLAG00000012009) #19 C2orf69 (ENSCLAG00000012813) #20 SATB2 (ENSCLAG00000016994) #22 PLCL1 (ENSCLAG00000016098) #24 BOLL (ENSCLAG00000017375) #25 MARS2 (ENSCLAG00000010386) #26 RFTN2 (ENSCLAG00000009821) #27 MOB4 (ENSCLAG00000010086) #28 ENSCLAG00000010686 #29 HSPD1 (ENSCLAG00000011541) #30 COQ10B (ENSCLAG00000017377) #31 SF3B1 (ENSCLAG00000014767) #32 ANKRD44 (ENSCLAG00000015396) #33 PGAP1 (ENSCLAG00000011838) #36 GTF3C3 (ENSCLAG00000009827) CCDC150 (ENSCLAG00000012365) HECW2 (ENSCLAG00000011628) STK17B (ENSCLAG00000012520) ##17 Guinea pig MODERN SPECIES 104 HYCC2 (ENSCPOG00000010108) ORC2 (ENSCPOG00000004552) NIF3L1 (ENSCPOG00000008572) PPIL3 (ENSCPOG00000008570) #7 CLK1 (ENSCPOG00000027067) #8 ENSCPOG00000010449 #9 ENSCPOG00000019962 #10 ENSCPOG00000033032 #11 Aox1 (ENSCPOG00000025955) #12 ENSCPOG00000002722 #13 ENSCPOG00000012077 #15 SPATS2L (ENSCPOG00000003190) #16 MAIP1 (ENSCPOG00000003800) #18 TYW5 (ENSCPOG00000035856) #19 C2orf69 (ENSCPOG00000009934) #20 SATB2 (ENSCPOG00000015198) #22 PLCL1 (ENSCPOG00000011478) #24 BOLL (ENSCPOG00000000390) #25 MARS2 (ENSCPOG00000025973) #26 RFTN2 (ENSCPOG00000010463) #27 MOB4 (ENSCPOG00000012746) #28 ENSCPOG00000027474 #29 HSPD1 (ENSCPOG00000002588) #30 COQ10B (ENSCPOG00000002673) #31 SF3B1 (ENSCPOG00000009353) #32 ANKRD44 (ENSCPOG00000026494) #33 PGAP1 (ENSCPOG00000003177) #36 GTF3C3 (ENSCPOG00000006643) CCDC150 (ENSCPOG00000031267) ENSCPOG00000040067 HECW2 (ENSCPOG00000008908) Sciuridae ANCESTRAL SPECIES 10 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00390000005727.a.b.a.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Marmotini ANCESTRAL SPECIES 2 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b.v #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000012178.g.a.a ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a.v ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 Marmotini_b ANCESTRAL SPECIES 91 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000012178.g.a.a ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a.v ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 Squirrel MODERN SPECIES 106 SATB2 (ENSSTOG00000024964) #22 PLCL1 (ENSSTOG00000026164) #24 BOLL (ENSSTOG00000003536) #25 MARS2 (ENSSTOG00000015451) #26 RFTN2 (ENSSTOG00000015446) #27 MOB4 (ENSSTOG00000021024) #28 ENSSTOG00000031333 ##29 ENSSTOG00000028470 ##30 COQ10B (ENSSTOG00000011048) #31 SF3B1 (ENSSTOG00000011034) #32 ANKRD44 (ENSSTOG00000012130) #33 PGAP1 (ENSSTOG00000010633) #36 GTF3C3 (ENSSTOG00000011894) ENSSTOG00000014552 HECW2 (ENSSTOG00000015188) STK17B (ENSSTOG00000020599) ##17 Arctic ground squirrel MODERN SPECIES 210 ENSUPAG00010015923 #11 AOX1 (ENSUPAG00010015861) #12 SGO2 (ENSUPAG00010015843) #13 KCTD18 (ENSUPAG00010015819) #15 SPATS2L (ENSUPAG00010015777) #16 MAIP1 (ENSUPAG00010015760) #18 TYW5 (ENSUPAG00010015739) #19 C2orf69 (ENSUPAG00010015730) #20 FTCDNL1 (ENSUPAG00010015721) ENSUPAG00010015718 SATB2 (ENSUPAG00010015643) #22 PLCL1 (ENSUPAG00010015612) #24 BOLL (ENSUPAG00010015589) #25 MARS2 (ENSUPAG00010015585) #26 RFTN2 (ENSUPAG00010015580) #27 ENSUPAG00010015569 ##29 ENSUPAG00010015563 ##30 COQ10B (ENSUPAG00010015540) #31 SF3B1 (ENSUPAG00010015518) #32 Alpin marmot MODERN SPECIES 8 PPIL3 (ENSMMMG00000012069) #7 CLK1 (ENSMMMG00000012051) #8 ENSMMMG00000012026 #9 ENSMMMG00000011976 #10 ENSMMMG00000011959 ENSMMMG00000011912 #11 AOX1 (ENSMMMG00000011886) #12 ENSMMMG00000011877 #13 KCTD18 (ENSMMMG00000011839) #15 SPATS2L (ENSMMMG00000011689) #16 MAIP1 (ENSMMMG00000011679) #18 TYW5 (ENSMMMG00000011668) #19 C2orf69 (ENSMMMG00000011660) #20 FTCDNL1 (ENSMMMG00000011655) ENSMMMG00000011650 SATB2 (ENSMMMG00000011551) #22 ENSMMMG00000011481 PLCL1 (ENSMMMG00000011429) #24 BOLL (ENSMMMG00000011354) #25 MARS2 (ENSMMMG00000011347) #26 RFTN2 (ENSMMMG00000011220) #27 ENSMMMG00000011174 #28 ENSMMMG00000011161 ##29 ENSMMMG00000011138 #30 ENSMMMG00000011101 #31 SF3B1 (ENSMMMG00000011081) #32 ANKRD44 (ENSMMMG00000010980) #33 PGAP1 (ENSMMMG00000010912) #36 GTF3C3 (ENSMMMG00000010874) ENSMMMG00000010858 ENSMMMG00000010842 Eurasian red squirrel MODERN SPECIES 12 NIF3L1 (ENSSVLG00005004091) PPIL3 (ENSSVLG00005004070) #7 CLK1 (ENSSVLG00005004020) #8 BZW1 (ENSSVLG00005003945) #9 ENSSVLG00005003845 #10 ENSSVLG00005003767 #11 AOX1 (ENSSVLG00005003683) #12 SGO2 (ENSSVLG00005003633) #13 ENSSVLG00005003604 #15 SPATS2L (ENSSVLG00005003512) #16 MAIP1 (ENSSVLG00005003433) #18 TYW5 (ENSSVLG00005003405) #19 C2orf69 (ENSSVLG00005003387) #20 FTCDNL1 (ENSSVLG00005003343) ENSSVLG00005003317 SATB2 (ENSSVLG00005003278) #22 PLCL1 (ENSSVLG00005003227) #24 ENSSVLG00005003207 BOLL (ENSSVLG00005003123) #25 MARS2 (ENSSVLG00005003085) #26 RFTN2 (ENSSVLG00005003057) #27 MOB4 (ENSSVLG00005002989) #28 HSPE1 (ENSSVLG00005002940) ##29 ENSSVLG00005002895 #30 ENSSVLG00005002862 #31 SF3B1 (ENSSVLG00005002801) #32 ANKRD44 (ENSSVLG00005002705) #33 PGAP1 (ENSSVLG00005002564) #36 C2orf66 (ENSSVLG00005002524) ENSSVLG00005002519 GTF3C3 (ENSSVLG00005002487) Rodentia_B ANCESTRAL SPECIES 12 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Kangaroo rat MODERN SPECIES 320 ENSDORG00000024018 Hycc2 (ENSDORG00000029531) Orc2 (ENSDORG00000007391) Nif3l1 (ENSDORG00000007390) Ppil3 (ENSDORG00000007389) #7 Clk1 (ENSDORG00000007388) #8 Bzw1 (ENSDORG00000029865) #9 Aox2 (ENSDORG00000026718) #10 Aox4 (ENSDORG00000026668) #11 Aox3 (ENSDORG00000025305) #11 Aox1 (ENSDORG00000004358) #12 Kctd18 (ENSDORG00000007817) #15 Spats2l (ENSDORG00000007816) #16 Maip1 (ENSDORG00000012569) #18 Tyw5 (ENSDORG00000012567) #19 Satb2 (ENSDORG00000001292) #22 Plcl1 (ENSDORG00000000485) #24 Boll (ENSDORG00000010791) #25 Mars2 (ENSDORG00000010789) #26 Rftn2 (ENSDORG00000008999) #27 Mob4 (ENSDORG00000023241) #28 ENSDORG00000011071 #29 Hspd1 (ENSDORG00000011069) #30 Coq10b (ENSDORG00000025804) #31 Sf3b1 (ENSDORG00000002399) #32 ENSDORG00000029693 #33 ENSDORG00000024945 Pgap1 (ENSDORG00000000406) #36 Gtf3c3 (ENSDORG00000000403) Hecw2 (ENSDORG00000014759) Stk17b (ENSDORG00000029601) ##17 Myomorpha ANCESTRAL SPECIES 10 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Lesser Egyptian jerboa MODERN SPECIES 52 ENSJJAG00000013473 Clk1 (ENSJJAG00000024354) #8 Bzw1 (ENSJJAG00000022065) #9 Aox2 (ENSJJAG00000011668) #10 Aox4 (ENSJJAG00000017799) #11 Aox1 (ENSJJAG00000019598) #12 ENSJJAG00000015058 #13 Kctd18 (ENSJJAG00000016069) #15 Spats2l (ENSJJAG00000019268) #16 ENSJJAG00000010933 ENSJJAG00000012063 Maip1 (ENSJJAG00000023816) #18 Tyw5 (ENSJJAG00000019361) #19 1700066M21Rik (ENSJJAG00000019976) #20 ENSJJAG00000023987 Satb2 (ENSJJAG00000019883) #22 ENSJJAG00000012932 Plcl1 (ENSJJAG00000024297) #24 Boll (ENSJJAG00000015508) #25 Mars2 (ENSJJAG00000023940) #26 Rftn2 (ENSJJAG00000002223) #27 ENSJJAG00000009865 #28 ENSJJAG00000012025 ##29 ENSJJAG00000016713 ##30 Coq10b (ENSJJAG00000020646) #31 Sf3b1 (ENSJJAG00000010903) #32 ENSJJAG00000018305 Ankrd44 (ENSJJAG00000016107) #33 Pgap1 (ENSJJAG00000009924) #36 Gtf3c3 (ENSJJAG00000004649) Hecw2 (ENSJJAG00000022806) Muroidea ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Upper Galilee mountains blind mole rat MODERN SPECIES 417 ENSNGAG00000023509 ENSNGAG00000022183 Ppil3 (ENSNGAG00000014999) #7 ENSNGAG00000010384 #8 Bzw1 (ENSNGAG00000014200) #9 Aox2 (ENSNGAG00000021935) #10 Aox4 (ENSNGAG00000001220) #11 Aox3 (ENSNGAG00000019159) #11 Aox1 (ENSNGAG00000018103) #12 ENSNGAG00000017175 #13 Kctd18 (ENSNGAG00000011886) #15 Spats2l (ENSNGAG00000009131) #16 Maip1 (ENSNGAG00000013388) #18 Tyw5 (ENSNGAG00000022701) #19 1700066M21Rik (ENSNGAG00000015731) #20 Satb2 (ENSNGAG00000023604) #22 Plcl1 (ENSNGAG00000017912) #24 ENSNGAG00000014596 #25 Muroidea_A ANCESTRAL SPECIES 19 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Murinae ANCESTRAL SPECIES 9 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Mus ANCESTRAL SPECIES 5 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b.m.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Mus_A ANCESTRAL SPECIES 5 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b.m.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493.c #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a.y.b ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929.b Mus_B ANCESTRAL SPECIES 7 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b.p #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b.m.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493.c #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a.y.b.a.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929.b Mus_C ANCESTRAL SPECIES 1 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b.p #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b.m.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493.c #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a.y.b.a.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929.b ENSGT00390000005285 spretus MODERN SPECIES Hycc2 (MGP_SPRETEiJ_G0014973) Orc2 (MGP_SPRETEiJ_G0014972) Nif3l1 (MGP_SPRETEiJ_G0014971) Ppil3 (MGP_SPRETEiJ_G0014970) #7 Clk1 (MGP_SPRETEiJ_G0014969) #8 Bzw1 (MGP_SPRETEiJ_G0014968) #9 Aox2 (MGP_SPRETEiJ_G0014967) #10 Aox4 (MGP_SPRETEiJ_G0014966) #11 Aox3 (MGP_SPRETEiJ_G0014965) #11 Aox1 (MGP_SPRETEiJ_G0014964) #12 Sgo2a (MGP_SPRETEiJ_G0014963) #13 Kctd18 (MGP_SPRETEiJ_G0014962) #15 Spats2l (MGP_SPRETEiJ_G0014961) #16 Maip1 (MGP_SPRETEiJ_G0014960) #18 Tyw5 (MGP_SPRETEiJ_G0014959) #19 Satb2 (MGP_SPRETEiJ_G0014957) #22 Hsfy2 (MGP_SPRETEiJ_G0014956) Plcl1 (MGP_SPRETEiJ_G0014955) #24 MGP_SPRETEiJ_G0014954 #25 Mars2 (MGP_SPRETEiJ_G0014953) #26 Rftn2 (MGP_SPRETEiJ_G0014952) #27 Mob4 (MGP_SPRETEiJ_G0014951) #28 MGP_SPRETEiJ_G0014950 ##29 MGP_SPRETEiJ_G0014949 ##30 MGP_SPRETEiJ_G0014948 #31 Sf3b1 (MGP_SPRETEiJ_G0014947) #32 Ankrd44 (MGP_SPRETEiJ_G0014946) #33 MGP_SPRETEiJ_G0014945 #36 Gtf3c3 (MGP_SPRETEiJ_G0014944) Ccdc150 (MGP_SPRETEiJ_G0014943) Hecw2 (MGP_SPRETEiJ_G0014942) Steppe mouse MODERN SPECIES 84 Maip1 (ENSMSIG00000012877) #18 Tyw5 (ENSMSIG00000012899) #19 1700066M21Rik (ENSMSIG00000012910) #20 Satb2 (ENSMSIG00000012940) #22 Hsfy2 (ENSMSIG00000013021) Mouse MODERN SPECIES Orc2 (ENSMUSG00000026037) Nif3l1 (ENSMUSG00000026036) Ppil3 (ENSMUSG00000026035) #7 Clk1 (ENSMUSG00000026034) #8 Bzw1 (ENSMUSG00000051223) #9 Aox2 (ENSMUSG00000079554) #10 Aox4 (ENSMUSG00000038242) #11 Aox3 (ENSMUSG00000064294) #11 Aox1 (ENSMUSG00000063558) #12 Sgo2a (ENSMUSG00000026039) #13 Kctd18 (ENSMUSG00000054770) #15 Spats2l (ENSMUSG00000038305) #16 Maip1 (ENSMUSG00000025971) #18 Tyw5 (ENSMUSG00000048495) #19 1700066M21Rik (ENSMUSG00000038323) #20 Satb2 (ENSMUSG00000038331) #22 Hsfy2 (ENSMUSG00000045336) Plcl1 (ENSMUSG00000038349) #24 Boll (ENSMUSG00000025977) #25 Mars2 (ENSMUSG00000046994) #26 Rftn2 (ENSMUSG00000025978) #27 Mob4 (ENSMUSG00000025979) #28 Hspe1 (ENSMUSG00000073676) ##29 Hspd1 (ENSMUSG00000025980) ##30 Coq10b (ENSMUSG00000025981) #31 Sf3b1 (ENSMUSG00000025982) #32 Ankrd44 (ENSMUSG00000052331) #33 Pgap1 (ENSMUSG00000073678) #36 Gm34066 (ENSMUSG00000109809) Gtf3c3 (ENSMUSG00000041303) Ccdc150 (ENSMUSG00000025983) Ryukyu mouse MODERN SPECIES Nif3l1 (MGP_CAROLIEiJ_G0014165) Ppil3 (MGP_CAROLIEiJ_G0014164) #7 Clk1 (MGP_CAROLIEiJ_G0014163) #8 Bzw1 (MGP_CAROLIEiJ_G0014162) #9 Aox2 (MGP_CAROLIEiJ_G0014161) #10 Aox4 (MGP_CAROLIEiJ_G0014160) #11 Aox3 (MGP_CAROLIEiJ_G0014159) #11 Aox1 (MGP_CAROLIEiJ_G0014158) #12 MGP_CAROLIEiJ_G0014157 #13 MGP_CAROLIEiJ_G0014156 #13 Kctd18 (MGP_CAROLIEiJ_G0014155) #15 Spats2l (MGP_CAROLIEiJ_G0014154) #16 Maip1 (MGP_CAROLIEiJ_G0014153) #18 Tyw5 (MGP_CAROLIEiJ_G0014152) #19 1700066M21Rik (MGP_CAROLIEiJ_G0014151) #20 Satb2 (MGP_CAROLIEiJ_G0014150) #22 Hsfy2 (MGP_CAROLIEiJ_G0014149) Plcl1 (MGP_CAROLIEiJ_G0014148) #24 Mars2 (MGP_CAROLIEiJ_G0014147) #26 Rftn2 (MGP_CAROLIEiJ_G0014146) #27 Mob4 (MGP_CAROLIEiJ_G0014145) #28 MGP_CAROLIEiJ_G0014144 ##29 Hspd1 (MGP_CAROLIEiJ_G0014143) ##30 Coq10b (MGP_CAROLIEiJ_G0014142) #31 Sf3b1 (MGP_CAROLIEiJ_G0014141) #32 Ankrd44 (MGP_CAROLIEiJ_G0014140) #33 Pgap1 (MGP_CAROLIEiJ_G0014139) #36 MGP_CAROLIEiJ_G0014138 Ccdc150 (MGP_CAROLIEiJ_G0014137) Hecw2 (MGP_CAROLIEiJ_G0014136) Stk17b (MGP_CAROLIEiJ_G0014135) ##17 Shrew mouse MODERN SPECIES 18 Hycc2 (MGP_PahariEiJ_G0027405) Orc2 (MGP_PahariEiJ_G0027404) Nif3l1 (MGP_PahariEiJ_G0027403) Ppil3 (MGP_PahariEiJ_G0027402) #7 Clk1 (MGP_PahariEiJ_G0027401) #8 Bzw1 (MGP_PahariEiJ_G0027400) #9 Aox4 (MGP_PahariEiJ_G0027399) #11 Aox3 (MGP_PahariEiJ_G0027398) #11 Aox1 (MGP_PahariEiJ_G0027397) #12 Sgo2a (MGP_PahariEiJ_G0027396) #13 Kctd18 (MGP_PahariEiJ_G0027395) #15 Spats2l (MGP_PahariEiJ_G0027394) #16 Maip1 (MGP_PahariEiJ_G0027393) #18 Tyw5 (MGP_PahariEiJ_G0027392) #19 1700066M21Rik (MGP_PahariEiJ_G0027391) #20 Satb2 (MGP_PahariEiJ_G0027390) #22 Hsfy2 (MGP_PahariEiJ_G0027389) Plcl1 (MGP_PahariEiJ_G0027388) #24 Boll (MGP_PahariEiJ_G0027387) #25 Mars2 (MGP_PahariEiJ_G0027386) #26 Rftn2 (MGP_PahariEiJ_G0027385) #27 MGP_PahariEiJ_G0027384 #28 MGP_PahariEiJ_G0027383 ##29 MGP_PahariEiJ_G0027382 ##30 Coq10b (MGP_PahariEiJ_G0027381) #31 Ankrd44 (MGP_PahariEiJ_G0027379) #33 Pgap1 (MGP_PahariEiJ_G0027378) #36 Gtf3c3 (MGP_PahariEiJ_G0027377) Ccdc150 (MGP_PahariEiJ_G0027376) Hecw2 (MGP_PahariEiJ_G0027375) Stk17b (MGP_PahariEiJ_G0027374) ##17 Rat MODERN SPECIES 19 Orc2 (ENSRNOG00000012558) Nif3l1 (ENSRNOG00000013446) Ppil3 (ENSRNOG00000013636) Clk1 (ENSRNOG00000025768) #8 Bzw1 (ENSRNOG00000013977) #9 Aox2 (ENSRNOG00000033923) #10 ENSRNOG00000068995 Aox3 (ENSRNOG00000014555) #11 Aox1 (ENSRNOG00000015354) #12 Sgo2 (ENSRNOG00000027035) #13 Kctd18 (ENSRNOG00000027091) #15 Spats2l (ENSRNOG00000016012) #16 Maip1 (ENSRNOG00000015983) #18 Tyw5 (ENSRNOG00000010100) #19 RGD1306941 (ENSRNOG00000010185) #20 Satb2 (ENSRNOG00000010188) #22 Hsfy2 (ENSRNOG00000038569) Plcl1 (ENSRNOG00000032659) #24 Boll (ENSRNOG00000054379) #25 Mars2 (ENSRNOG00000065339) #26 AABR07067762.1 (ENSRNOG00000055383) Rftn2 (ENSRNOG00000015594) #27 Mob4 (ENSRNOG00000014980) #28 Hspe1 (ENSRNOG00000051624) ##29 Hspd1 (ENSRNOG00000014525) ##30 Coq10b (ENSRNOG00000014456) #31 Sf3b1 (ENSRNOG00000013516) #32 Tmem258b (ENSRNOG00000032740) Ankrd44 (ENSRNOG00000021384) #33 Pgap1 (ENSRNOG00000013388) #36 LOC686030 (ENSRNOG00000067303) Cricetidae ANCESTRAL SPECIES 19 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b.w.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 Cricetinae ANCESTRAL SPECIES 3 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.b ##29 ENSGT00390000005727.a.b.b.w.a ##30 ENSGT00390000005727.a.b.b.w.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Chinese hamster chok1gshd MODERN SPECIES 1 Orc2 (ENSCGRG00001016911) ENSCGRG00001018137 Ppil3 (ENSCGRG00001021470) #7 Clk1 (ENSCGRG00001018410) #8 Bzw1 (ENSCGRG00001017178) #9 Aox2 (ENSCGRG00001017735) #10 Aox4 (ENSCGRG00001016089) #11 Aox3 (ENSCGRG00001016559) #11 Aox1 (ENSCGRG00001018485) #12 ENSCGRG00001016045 #13 Kctd18 (ENSCGRG00001016666) #15 Spats2l (ENSCGRG00001019123) #16 Maip1 (ENSCGRG00001018639) #18 Tyw5 (ENSCGRG00001015297) #19 1700066M21Rik (ENSCGRG00001016585) #20 Satb2 (ENSCGRG00001019669) #22 Hsfy2 (ENSCGRG00001009926) ENSCGRG00001010393 Plcl1 (ENSCGRG00001015676) #24 ENSCGRG00001009537 Boll (ENSCGRG00001020168) #25 Mars2 (ENSCGRG00001010364) #26 Rftn2 (ENSCGRG00001017788) #27 Mob4 (ENSCGRG00001024203) #28 ENSCGRG00001015345 ##29 HSPD1 (ENSCGRG00001021126) ##30 Coq10b (ENSCGRG00001015271) #31 Sf3b1 (ENSCGRG00001016990) #32 Ankrd44 (ENSCGRG00001018584) #33 Pgap1 (ENSCGRG00001016707) #36 Gtf3c3 (ENSCGRG00001014543) Golden Hamster MODERN SPECIES 723 Aox1 (ENSMAUG00000014270) #12 ENSMAUG00000000248 #13 Kctd18 (ENSMAUG00000019856) #15 Spats2l (ENSMAUG00000016921) #16 Maip1 (ENSMAUG00000007424) #18 Tyw5 (ENSMAUG00000009449) #19 1700066M21Rik (ENSMAUG00000017438) #20 Satb2 (ENSMAUG00000008545) #22 Plcl1 (ENSMAUG00000003415) #24 Boll (ENSMAUG00000008224) #25 Mars2 (ENSMAUG00000017224) #26 Rftn2 (ENSMAUG00000014348) #27 ENSMAUG00000007042 #28 ENSMAUG00000017789 ##30 Coq10b (ENSMAUG00000010644) #31 Sf3b1 (ENSMAUG00000009071) #32 Ankrd44 (ENSMAUG00000019633) #33 Pgap1 (ENSMAUG00000018155) #36 Gtf3c3 (ENSMAUG00000018770) Ccdc150 (ENSMAUG00000015624) Hecw2 (ENSMAUG00000011882) Stk17b (ENSMAUG00000018862) ##17 ENSMAUG00000020218 Cricetidae_B ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT00390000006350.m.a.c.a.`b ##29 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a.ab ##29 ENSGT00390000005727.a.b.b.w.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 Prairie vole MODERN SPECIES 91 Hycc2 (ENSMOCG00000012367) Orc2 (ENSMOCG00000016158) Nif3l1 (ENSMOCG00000012327) ENSMOCG00000013096 #7 ENSMOCG00000005608 #8 Bzw1 (ENSMOCG00000008375) #9 Aox2 (ENSMOCG00000018237) #10 Aox4 (ENSMOCG00000015766) #11 Aox1 (ENSMOCG00000001195) #12 ENSMOCG00000012099 #13 Kctd18 (ENSMOCG00000018835) #15 Spats2l (ENSMOCG00000006136) #16 Maip1 (ENSMOCG00000008182) #18 Tyw5 (ENSMOCG00000018540) #19 1700066M21Rik (ENSMOCG00000018970) #20 ENSMOCG00000005756 #22 Hsfy2 (ENSMOCG00000013974) Plcl1 (ENSMOCG00000014862) #24 Boll (ENSMOCG00000022824) #25 Mars2 (ENSMOCG00000006676) #26 Rftn2 (ENSMOCG00000020060) #27 ENSMOCG00000000253 ##29 Mob4 (ENSMOCG00000020652) #28 ENSMOCG00000002787 ##30 Coq10b (ENSMOCG00000012636) #31 Sf3b1 (ENSMOCG00000000455) #32 ENSMOCG00000021330 #33 Pgap1 (ENSMOCG00000013936) #36 Gtf3c3 (ENSMOCG00000019654) Ccdc150 (ENSMOCG00000001399) Hecw2 (ENSMOCG00000012140) Northern American deer mouse MODERN SPECIES 4 Hycc2 (ENSPEMG00000014604) Orc2 (ENSPEMG00000010035) Nif3l1 (ENSPEMG00000023040) Ppil3 (ENSPEMG00000011585) #7 Clk1 (ENSPEMG00000022508) #8 ENSPEMG00000013940 #9 Aox2 (ENSPEMG00000022861) #10 ENSPEMG00000027085 #11 Aox1 (ENSPEMG00000000656) #12 ENSPEMG00000020091 #13 Kctd18 (ENSPEMG00000028635) #15 Spats2l (ENSPEMG00000020003) #16 Maip1 (ENSPEMG00000015287) #18 Tyw5 (ENSPEMG00000009506) #19 1700066M21Rik (ENSPEMG00000001657) #20 Satb2 (ENSPEMG00000013811) #22 Hsfy2 (ENSPEMG00000029057) Plcl1 (ENSPEMG00000001849) #24 ENSPEMG00000024520 Boll (ENSPEMG00000018168) #25 Mars2 (ENSPEMG00000008377) #26 Rftn2 (ENSPEMG00000000048) #27 Mob4 (ENSPEMG00000017361) #28 ENSPEMG00000029712 ENSPEMG00000010504 ##29 Hspd1 (ENSPEMG00000015411) ##30 Coq10b (ENSPEMG00000005817) #31 Sf3b1 (ENSPEMG00000010699) #32 Ankrd44 (ENSPEMG00000016873) #33 Pgap1 (ENSPEMG00000008939) #36 ENSPEMG00000024521 Lagomorpha ANCESTRAL SPECIES 13 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.a.b #30 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Rabbit MODERN SPECIES 18 PPIL3 (ENSOCUG00000010661) #7 CLK1 (ENSOCUG00000010653) #8 ENSOCUG00000010647 #9 ENSOCUG00000026480 #10 ENSOCUG00000024593 #11 ENSOCUG00000035654 #11 AOX1 (ENSOCUG00000013971) #12 ENSOCUG00000000547 #13 ENSOCUG00000037416 #13 KCTD18 (ENSOCUG00000011556) #15 SPATS2L (ENSOCUG00000011549) #16 ENSOCUG00000017946 #18 ENSOCUG00000035705 #19 ENSOCUG00000016464 #19 C2orf69 (ENSOCUG00000016473) #20 SATB2 (ENSOCUG00000009700) #22 PLCL1 (ENSOCUG00000013978) #24 BOLL (ENSOCUG00000013979) #25 MARS2 (ENSOCUG00000017798) #26 RFTN2 (ENSOCUG00000003993) #27 ENSOCUG00000005712 #28 HSPE1 (ENSOCUG00000010360) ##29 HSPD1 (ENSOCUG00000012736) #30 COQ10B (ENSOCUG00000012735) #31 ENSOCUG00000000205 ENSOCUG00000029492 #32 ENSOCUG00000012722 #32 ANKRD44 (ENSOCUG00000009183) #33 PGAP1 (ENSOCUG00000002192) #36 C2orf66 (ENSOCUG00000028999) GTF3C3 (ENSOCUG00000000463) Pika MODERN SPECIES 573 MAIP1 (ENSOPRG00000004142) #18 TYW5 (ENSOPRG00000004133) #19 C2orf69 (ENSOPRG00000004115) #20 SATB2 (ENSOPRG00000003979) #22 Tree shrew MODERN SPECIES 795 SATB2 (ENSTBEG00000002443) #22 Primates ANCESTRAL SPECIES 13 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.b ##29 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.a.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Haplorrhini ANCESTRAL SPECIES 10 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.a.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Simiiformes ANCESTRAL SPECIES 15 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.a.c.a.mb ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Catarrhini ANCESTRAL SPECIES 16 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Hominoidea ANCESTRAL SPECIES 15 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb.a.a ##29 ENSGT00390000005727.a.b.a.b.c.b.a #30 ENSGT00390000006350.m.a.c.a.mb.b ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Hominidae ANCESTRAL SPECIES 17 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb.a.a ##29 ENSGT00390000005727.a.b.a.b.c.b.a #30 ENSGT00390000006350.m.a.c.a.mb.b ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb.a.a ##29 ENSGT00390000006350.m.a.c.a.mb.b ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000157455.i.b ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Gorilla MODERN SPECIES 15 HYCC2 (ENSGGOG00000039554) ORC2 (ENSGGOG00000014070) NIF3L1 (ENSGGOG00000014060) PPIL3 (ENSGGOG00000022268) #7 CLK1 (ENSGGOG00000016192) #8 BZW1 (ENSGGOG00000016296) #9 AOX1 (ENSGGOG00000006140) #12 SGO2 (ENSGGOG00000038921) #13 KCTD18 (ENSGGOG00000014079) #15 SPATS2L (ENSGGOG00000005917) #16 MAIP1 (ENSGGOG00000005661) #18 TYW5 (ENSGGOG00000041719) #19 C2orf69 (ENSGGOG00000005649) #20 FTCDNL1 (ENSGGOG00000040488) ENSGGOG00000044011 SATB2 (ENSGGOG00000014123) #22 PLCL1 (ENSGGOG00000001959) #24 BOLL (ENSGGOG00000013594) #25 MARS2 (ENSGGOG00000034895) #26 RFTN2 (ENSGGOG00000009318) #27 MOB4 (ENSGGOG00000036779) ##28 HSPE1 (ENSGGOG00000027944) ##29 HSPD1 (ENSGGOG00000008267) #30 COQ10B (ENSGGOG00000039158) #31 SF3B1 (ENSGGOG00000009264) #32 ENSGGOG00000038007 ANKRD44 (ENSGGOG00000014558) #33 PGAP1 (ENSGGOG00000001785) #36 C2orf66 (ENSGGOG00000038009) GTF3C3 (ENSGGOG00000011787) CCDC150 (ENSGGOG00000010004) Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb.a.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000157455.i.b ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Human MODERN SPECIES 11 NDUFB3 (ENSG00000119013) HYCC2 (ENSG00000155744) ORC2 (ENSG00000115942) NIF3L1 (ENSG00000196290) PPIL3 (ENSG00000240344) #7 CLK1 (ENSG00000013441) #8 BZW1 (ENSG00000082153) #9 AOX1 (ENSG00000138356) #12 SGO2 (ENSG00000163535) #13 KCTD18 (ENSG00000155729) #15 SPATS2L (ENSG00000196141) #16 MAIP1 (ENSG00000162972) #18 TYW5 (ENSG00000162971) #19 C2orf69 (ENSG00000178074) #20 FTCDNL1 (ENSG00000226124) SATB2 (ENSG00000119042) #22 PLCL1 (ENSG00000115896) #24 BOLL (ENSG00000152430) #25 MARS2 (ENSG00000247626) #26 RFTN2 (ENSG00000162944) #27 MOB4 (ENSG00000115540) ##28 HSPE1-MOB4 (ENSG00000270757) HSPE1 (ENSG00000115541) ##29 HSPD1 (ENSG00000144381) #30 COQ10B (ENSG00000115520) #31 SF3B1 (ENSG00000115524) #32 ANKRD44 (ENSG00000065413) #33 PGAP1 (ENSG00000197121) #36 C2orf66 (ENSG00000187944) GTF3C3 (ENSG00000119041) CCDC150 (ENSG00000144395) Pan ANCESTRAL SPECIES 12 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb.a.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000157455.i.b ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Chimpanzee MODERN SPECIES 15 ORC2 (ENSPTRG00000012795) NIF3L1 (ENSPTRG00000012794) PPIL3 (ENSPTRG00000012793) #7 CLK1 (ENSPTRG00000012792) #8 BZW1 (ENSPTRG00000012791) #9 ENSPTRG00000044647 #10 AOX1 (ENSPTRG00000012790) #12 SGO2 (ENSPTRG00000022953) #13 KCTD18 (ENSPTRG00000012787) #15 SPATS2L (ENSPTRG00000012785) #16 MAIP1 (ENSPTRG00000012784) #18 TYW5 (ENSPTRG00000012783) #19 C2orf69 (ENSPTRG00000012782) #20 FTCDNL1 (ENSPTRG00000047502) ENSPTRG00000050460 SATB2 (ENSPTRG00000012779) #22 PLCL1 (ENSPTRG00000012778) #24 BOLL (ENSPTRG00000012777) #25 MARS2 (ENSPTRG00000047853) #26 RFTN2 (ENSPTRG00000012776) #27 MOB4 (ENSPTRG00000012775) ##28 HSPE1 (ENSPTRG00000012774) ##29 HSPD1 (ENSPTRG00000044665) #30 COQ10B (ENSPTRG00000012772) #31 SF3B1 (ENSPTRG00000012771) #32 ENSPTRG00000049270 ANKRD44 (ENSPTRG00000012770) #33 PGAP1 (ENSPTRG00000012769) #36 C2BH2orf66 (ENSPTRG00000012768) GTF3C3 (ENSPTRG00000012767) CCDC150 (ENSPTRG00000012765) Bonobo MODERN SPECIES 15 ORC2 (ENSPPAG00000030211) NIF3L1 (ENSPPAG00000043491) PPIL3 (ENSPPAG00000039183) #7 CLK1 (ENSPPAG00000036957) #8 BZW1 (ENSPPAG00000027971) #9 ENSPPAG00000030893 #10 AOX1 (ENSPPAG00000000241) #12 SGO2 (ENSPPAG00000000061) #13 KCTD18 (ENSPPAG00000038865) #15 SPATS2L (ENSPPAG00000036160) #16 MAIP1 (ENSPPAG00000026692) #18 TYW5 (ENSPPAG00000027150) #19 C2orf69 (ENSPPAG00000035529) #20 FTCDNL1 (ENSPPAG00000020283) ENSPPAG00000039843 SATB2 (ENSPPAG00000044026) #22 PLCL1 (ENSPPAG00000042453) #24 BOLL (ENSPPAG00000033757) #25 MARS2 (ENSPPAG00000007220) #26 RFTN2 (ENSPPAG00000026815) #27 MOB4 (ENSPPAG00000044023) ##28 ENSPPAG00000023895 ##29 HSPD1 (ENSPPAG00000038858) #30 COQ10B (ENSPPAG00000010452) #31 SF3B1 (ENSPPAG00000035007) #32 ENSPPAG00000043776 ENSPPAG00000042224 ANKRD44 (ENSPPAG00000033556) #33 PGAP1 (ENSPPAG00000039254) #36 C2orf66 (ENSPPAG00000029492) GTF3C3 (ENSPPAG00000002745) Orangutan MODERN SPECIES 15 NDUFB3 (ENSPPYG00000013065) HYCC2 (ENSPPYG00000029836) ORC2 (ENSPPYG00000013064) NIF3L1 (ENSPPYG00000013063) ENSPPYG00000013062 CLK1 (ENSPPYG00000013061) #8 BZW1 (ENSPPYG00000035986) #9 AOX1 (ENSPPYG00000013058) #12 SGO2 (ENSPPYG00000013057) #13 KCTD18 (ENSPPYG00000030650) #15 SPATS2L (ENSPPYG00000013055) #16 MAIP1 (ENSPPYG00000035692) #18 TYW5 (ENSPPYG00000033416) #19 C2orf69 (ENSPPYG00000013054) #20 FTCDNL1 (ENSPPYG00000033061) SATB2 (ENSPPYG00000013052) #22 PLCL1 (ENSPPYG00000039108) #24 BOLL (ENSPPYG00000037688) #25 MARS2 (ENSPPYG00000013049) #26 ENSPPYG00000041557 RFTN2 (ENSPPYG00000013048) #27 MOB4 (ENSPPYG00000013047) ##28 HSPE1 (ENSPPYG00000025876) ##29 HSPD1 (ENSPPYG00000013046) #30 COQ10B (ENSPPYG00000039065) #31 SF3B1 (ENSPPYG00000013044) #32 ANKRD44 (ENSPPYG00000013043) #33 PGAP1 (ENSPPYG00000013042) #36 C2orf66 (ENSPPYG00000037735) GTF3C3 (ENSPPYG00000013040) CCDC150 (ENSPPYG00000013039) Gibbon MODERN SPECIES 14 HYCC2 (ENSNLEG00000006941) ORC2 (ENSNLEG00000006938) NIF3L1 (ENSNLEG00000006935) PPIL3 (ENSNLEG00000034236) #7 CLK1 (ENSNLEG00000032526) #8 BZW1 (ENSNLEG00000006929) #9 ENSNLEG00000029066 #10 AOX1 (ENSNLEG00000006920) #12 SGO2 (ENSNLEG00000006913) #13 KCTD18 (ENSNLEG00000006912) #15 SPATS2L (ENSNLEG00000006905) #16 MAIP1 (ENSNLEG00000029234) #18 TYW5 (ENSNLEG00000031551) #19 C2orf69 (ENSNLEG00000031645) #20 FTCDNL1 (ENSNLEG00000029410) SATB2 (ENSNLEG00000006893) #22 PLCL1 (ENSNLEG00000006890) #24 BOLL (ENSNLEG00000006885) #25 MARS2 (ENSNLEG00000018752) #26 RFTN2 (ENSNLEG00000006883) #27 MOB4 (ENSNLEG00000006881) ##28 ENSNLEG00000030370 ##29 ENSNLEG00000006874 #30 ENSNLEG00000029205 COQ10B (ENSNLEG00000006871) #31 SF3B1 (ENSNLEG00000006861) #32 ANKRD44 (ENSNLEG00000006855) #33 PGAP1 (ENSNLEG00000006849) #36 C2orf66 (ENSNLEG00000006848) GTF3C3 (ENSNLEG00000006837) ENSNLEG00000006833 Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00950000183743 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b ##29 ENSGT00390000006350.m.a.c.a.mb ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #33 ENSGT00390000016484 #36 Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00950000183743 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 Vervet Monkey MODERN SPECIES 1 HYCC2 (ENSCSAG00000010815) ORC2 (ENSCSAG00000010834) NIF3L1 (ENSCSAG00000010842) PPIL3 (ENSCSAG00000010852) #7 CLK1 (ENSCSAG00000010924) #8 BZW1 (ENSCSAG00000010957) #9 ENSCSAG00000011187 #10 AOX1 (ENSCSAG00000011276) #12 SGO2 (ENSCSAG00000011303) #13 KCTD18 (ENSCSAG00000011318) #15 SPATS2L (ENSCSAG00000011326) #16 MAIP1 (ENSCSAG00000011334) #18 TYW5 (ENSCSAG00000011351) #19 C2orf69 (ENSCSAG00000011358) #20 FTCDNL1 (ENSCSAG00000011372) SATB2 (ENSCSAG00000011380) #22 PLCL1 (ENSCSAG00000011391) #24 BOLL (ENSCSAG00000011399) #25 MARS2 (ENSCSAG00000018765) #26 RFTN2 (ENSCSAG00000011411) #27 MOB4 (ENSCSAG00000011421) ##28 ENSCSAG00000011427 ##29 HSPD1 (ENSCSAG00000011463) #30 COQ10B (ENSCSAG00000011483) #31 SF3B1 (ENSCSAG00000011505) #32 ENSCSAG00000011517 ANKRD44 (ENSCSAG00000011536) #33 PGAP1 (ENSCSAG00000011561) #36 C2orf66 (ENSCSAG00000011573) GTF3C3 (ENSCSAG00000011582) CCDC150 (ENSCSAG00000011637) Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00950000183743 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 Macaca ANCESTRAL SPECIES 15 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #33 ENSGT00390000016484 #36 Pig-tailed macaque MODERN SPECIES 409 NIF3L1 (ENSMNEG00000040987) PPIL3 (ENSMNEG00000032202) #7 CLK1 (ENSMNEG00000031266) #8 BZW1 (ENSMNEG00000043638) #9 ENSMNEG00000045434 #10 ENSMNEG00000034841 #11 AOX1 (ENSMNEG00000024714) #12 SGO2 (ENSMNEG00000035682) #13 KCTD18 (ENSMNEG00000038609) #15 SPATS2L (ENSMNEG00000016309) #16 MAIP1 (ENSMNEG00000028494) #18 TYW5 (ENSMNEG00000030303) #19 C2orf69 (ENSMNEG00000035266) #20 FTCDNL1 (ENSMNEG00000037918) ENSMNEG00000040066 SATB2 (ENSMNEG00000043012) #22 PLCL1 (ENSMNEG00000019208) #24 BOLL (ENSMNEG00000033015) #25 MARS2 (ENSMNEG00000019593) #26 RFTN2 (ENSMNEG00000033769) #27 ENSMNEG00000033689 MOB4 (ENSMNEG00000033188) ##28 ENSMNEG00000039279 ##29 ENSMNEG00000043358 COQ10B (ENSMNEG00000032409) #31 SF3B1 (ENSMNEG00000042333) #32 ENSMNEG00000036998 ANKRD44 (ENSMNEG00000043273) #33 ENSMNEG00000045145 PGAP1 (ENSMNEG00000033082) #36 C2orf66 (ENSMNEG00000038376) Macaca_a ANCESTRAL SPECIES 17 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a.e #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 Crab-eating macaque MODERN SPECIES 3 HYCC2 (ENSMFAG00000032144) ORC2 (ENSMFAG00000040620) NIF3L1 (ENSMFAG00000003012) PPIL3 (ENSMFAG00000038708) #7 CLK1 (ENSMFAG00000030719) #8 BZW1 (ENSMFAG00000020809) #9 ENSMFAG00000034555 #10 AOX1 (ENSMFAG00000036889) #12 SGO2 (ENSMFAG00000041855) #13 KCTD18 (ENSMFAG00000037300) #15 SPATS2L (ENSMFAG00000003450) #16 MAIP1 (ENSMFAG00000045074) #18 TYW5 (ENSMFAG00000004016) #19 C2orf69 (ENSMFAG00000032268) #20 ENSMFAG00000038094 SATB2 (ENSMFAG00000035983) #22 PLCL1 (ENSMFAG00000038838) #24 BOLL (ENSMFAG00000030962) #25 MARS2 (ENSMFAG00000012275) #26 ENSMFAG00000003051 RFTN2 (ENSMFAG00000003082) #27 ENSMFAG00000035530 ##28 ENSMFAG00000045023 ##29 ENSMFAG00000033000 #30 COQ10B (ENSMFAG00000017910) #31 ENSMFAG00000045829 SF3B1 (ENSMFAG00000036680) #32 ENSMFAG00000057968 ENSMFAG00000057322 ANKRD44 (ENSMFAG00000032694) #33 PGAP1 (ENSMFAG00000029122) #36 Rhesus MODERN SPECIES 3 ORC2 (ENSMMUG00000014460) NIF3L1 (ENSMMUG00000006639) PPIL3 (ENSMMUG00000006638) CLK1 (ENSMMUG00000006640) #8 BZW1 (ENSMMUG00000022202) #9 AOX2 (ENSMMUG00000005835) #10 AOX4 (ENSMMUG00000047974) #11 AOX1 (ENSMMUG00000021931) #12 SGO2 (ENSMMUG00000052913) #13 KCTD18 (ENSMMUG00000008102) #15 SPATS2L (ENSMMUG00000008101) #16 MAIP1 (ENSMMUG00000023168) #18 TYW5 (ENSMMUG00000023167) #19 C12H2orf69 (ENSMMUG00000041535) #20 FTCDNL1 (ENSMMUG00000031310) SATB2 (ENSMMUG00000046254) #22 ENSMMUG00000059853 PLCL1 (ENSMMUG00000012822) #24 BOLL (ENSMMUG00000023811) #25 MARS2 (ENSMMUG00000023810) #26 RFTN2 (ENSMMUG00000023809) #27 HSPE1 (ENSMMUG00000016547) #28 HSPD1 (ENSMMUG00000010489) #30 COQ10B (ENSMMUG00000056418) #31 ENSMMUG00000058328 SF3B1 (ENSMMUG00000022430) #32 ANKRD44 (ENSMMUG00000022425) #33 PGAP1 (ENSMMUG00000043369) #36 C2H2orf66 (ENSMMUG00000054516) GTF3C3 (ENSMMUG00000008643) CCDC150 (ENSMMUG00000015970) Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00950000183743 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00940000157455.i.b ENSGT00950000182908.D #33 ENSGT00390000016484 #36 Olive baboon MODERN SPECIES 1 ORC2 (ENSPANG00000034347) NIF3L1 (ENSPANG00000025493) ENSPANG00000009683 CLK1 (ENSPANG00000015580) #8 BZW1 (ENSPANG00000016459) #9 AOX2 (ENSPANG00000016460) #10 AOX4 (ENSPANG00000024540) #11 AOX1 (ENSPANG00000015933) #12 SGO2 (ENSPANG00000021922) #13 KCTD18 (ENSPANG00000021439) #15 SPATS2L (ENSPANG00000008482) #16 TYW5 (ENSPANG00000009235) #19 C2orf69 (ENSPANG00000040521) #20 ENSPANG00000044612 ENSPANG00000031615 SATB2 (ENSPANG00000011212) #22 ENSPANG00000050725 PLCL1 (ENSPANG00000000848) #24 BOLL (ENSPANG00000009570) #25 ENSPANG00000042310 MARS2 (ENSPANG00000016544) #26 RFTN2 (ENSPANG00000009899) #27 MOB4 (ENSPANG00000016215) ##28 ENSPANG00000046137 ##29 ENSPANG00000029555 #30 COQ10B (ENSPANG00000006879) #31 ENSPANG00000037062 SF3B1 (ENSPANG00000013417) #32 ENSPANG00000016748 ENSPANG00000037191 ENSPANG00000048684 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00950000183743 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00940000157455.i.b ENSGT00950000182908.D #33 ENSGT00390000016484 #36 Drill MODERN SPECIES 457 PPIL3 (ENSMLEG00000039054) #7 CLK1 (ENSMLEG00000029735) #8 BZW1 (ENSMLEG00000018894) #9 ENSMLEG00000016360 #10 ENSMLEG00000013006 #11 AOX1 (ENSMLEG00000039204) #12 SGO2 (ENSMLEG00000039520) #13 KCTD18 (ENSMLEG00000042319) #15 SPATS2L (ENSMLEG00000037145) #16 ENSMLEG00000036074 MAIP1 (ENSMLEG00000041626) #18 TYW5 (ENSMLEG00000038351) #19 C2orf69 (ENSMLEG00000015699) #20 FTCDNL1 (ENSMLEG00000042066) ENSMLEG00000042892 SATB2 (ENSMLEG00000037435) #22 PLCL1 (ENSMLEG00000042517) #24 Sooty mangabey MODERN SPECIES 570 NIF3L1 (ENSCATG00000030966) PPIL3 (ENSCATG00000031187) #7 CLK1 (ENSCATG00000030802) #8 BZW1 (ENSCATG00000032512) #9 ENSCATG00000019918 #10 ENSCATG00000042053 #11 AOX1 (ENSCATG00000033826) #12 SGO2 (ENSCATG00000027226) #13 KCTD18 (ENSCATG00000044706) #15 SPATS2L (ENSCATG00000008807) #16 MAIP1 (ENSCATG00000036858) #18 TYW5 (ENSCATG00000033078) #19 C2orf69 (ENSCATG00000031233) #20 FTCDNL1 (ENSCATG00000018934) ENSCATG00000044312 SATB2 (ENSCATG00000017161) #22 PLCL1 (ENSCATG00000014153) #24 BOLL (ENSCATG00000004430) #25 MARS2 (ENSCATG00000001827) #26 GLUD2 (ENSCATG00000044639) RFTN2 (ENSCATG00000031580) #27 MOB4 (ENSCATG00000002964) ##28 ENSCATG00000022859 ##29 HSPD1 (ENSCATG00000044175) #30 COQ10B (ENSCATG00000031857) #31 ENSCATG00000031238 SF3B1 (ENSCATG00000035735) #32 ENSCATG00000040754 ENSCATG00000039142 ANKRD44 (ENSCATG00000034086) #33 PGAP1 (ENSCATG00000041899) #36 Rhinopithecus ANCESTRAL SPECIES 83 ENSGT00940000163579 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00950000183743 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 Black snub-nosed monkey MODERN SPECIES 1955 MAIP1 (ENSRBIG00000010133) #18 TYW5 (ENSRBIG00000039190) #19 C2orf69 (ENSRBIG00000038270) #20 ENSRBIG00000040998 SATB2 (ENSRBIG00000026956) #22 PLCL1 (ENSRBIG00000030591) #24 Golden snub-nosed monkey MODERN SPECIES 676 ENSRROG00000029517 CLK1 (ENSRROG00000035273) #8 BZW1 (ENSRROG00000044305) #9 ENSRROG00000043595 #10 ENSRROG00000034026 #11 AOX1 (ENSRROG00000043118) #12 SGO2 (ENSRROG00000037302) #13 KCTD18 (ENSRROG00000043788) #15 SPATS2L (ENSRROG00000041208) #16 ENSRROG00000043858 ENSRROG00000040812 #18 TYW5 (ENSRROG00000033012) #19 C2orf69 (ENSRROG00000028208) #20 FTCDNL1 (ENSRROG00000042811) ENSRROG00000032256 SATB2 (ENSRROG00000044735) #22 Platyrrhini ANCESTRAL SPECIES 9 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234.c #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.b.b ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Cebidae ANCESTRAL SPECIES 11 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234.c #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.a.c.b.a.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Cebidae_a ANCESTRAL SPECIES 16 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234.c #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.a.c.b.a.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a #30 ENSGT00940000155367 #31 ENSGT00950000183198.c.a.a.b ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Bolivian squirrel monkey MODERN SPECIES 56 HYCC2 (ENSSBOG00000033197) ENSSBOG00000025751 NIF3L1 (ENSSBOG00000034561) ENSSBOG00000028593 CLK1 (ENSSBOG00000031614) #8 BZW1 (ENSSBOG00000020710) #9 ENSSBOG00000034034 #10 AOX1 (ENSSBOG00000032424) #12 SGO2 (ENSSBOG00000035222) #13 KCTD18 (ENSSBOG00000031520) #15 SPATS2L (ENSSBOG00000031853) #16 MAIP1 (ENSSBOG00000033061) #18 TYW5 (ENSSBOG00000020625) #19 C2orf69 (ENSSBOG00000031239) #20 FTCDNL1 (ENSSBOG00000021980) SATB2 (ENSSBOG00000028702) #22 ENSSBOG00000007950 PLCL1 (ENSSBOG00000033477) #24 BOLL (ENSSBOG00000027161) #25 MARS2 (ENSSBOG00000016226) #26 RFTN2 (ENSSBOG00000031373) #27 MOB4 (ENSSBOG00000023092) ##28 ENSSBOG00000024433 ENSSBOG00000027158 ##29 HSPD1 (ENSSBOG00000034003) #30 COQ10B (ENSSBOG00000021591) #31 ENSSBOG00000024424 SF3B1 (ENSSBOG00000020080) #32 ANKRD44 (ENSSBOG00000020670) #33 PGAP1 (ENSSBOG00000019868) #36 C2orf66 (ENSSBOG00000021609) Capuchin MODERN SPECIES 178 FAM126B (ENSCCAG00000029565) ORC2 (ENSCCAG00000000270) NIF3L1 (ENSCCAG00000020100) PPIL3 (ENSCCAG00000019393) #7 CLK1 (ENSCCAG00000021387) #8 BZW1 (ENSCCAG00000012616) #9 ENSCCAG00000028426 #10 AOX1 (ENSCCAG00000025414) #12 SGO2 (ENSCCAG00000032369) #13 KCTD18 (ENSCCAG00000023011) #15 SPATS2L (ENSCCAG00000033886) #16 MAIP1 (ENSCCAG00000012313) #18 TYW5 (ENSCCAG00000030363) #19 C2orf69 (ENSCCAG00000025235) #20 ENSCCAG00000027889 SATB2 (ENSCCAG00000028159) #22 PLCL1 (ENSCCAG00000008545) #24 BOLL (ENSCCAG00000026623) #25 MARS2 (ENSCCAG00000019937) #26 ENSCCAG00000037834 RFTN2 (ENSCCAG00000034642) #27 MOB4 (ENSCCAG00000026299) ##28 ENSCCAG00000018271 ##29 ENSCCAG00000028857 #30 Marmoset MODERN SPECIES 18 CLK1 (ENSCJAG00000004319) #8 BZW1 (ENSCJAG00000004267) #9 ENSCJAG00000033419 #10 AOX1 (ENSCJAG00000004230) #12 SGO2 (ENSCJAG00000004216) #13 KCTD18 (ENSCJAG00000031173) #15 ENSCJAG00000085721 SPATS2L (ENSCJAG00000004173) #16 ENSCJAG00000083755 MAIP1 (ENSCJAG00000037075) #18 TYW5 (ENSCJAG00000004155) #19 C2orf69 (ENSCJAG00000004149) #20 ENSCJAG00000044172 ENSCJAG00000078875 ENSCJAG00000082819 SATB2 (ENSCJAG00000004111) #22 ENSCJAG00000055486 ENSCJAG00000085382 PLCL1 (ENSCJAG00000004100) #24 ENSCJAG00000070051 BOLL (ENSCJAG00000004092) #25 MARS2 (ENSCJAG00000022885) #26 ENSCJAG00000077720 RFTN2 (ENSCJAG00000058836) #27 MOB4 (ENSCJAG00000045626) ##28 ENSCJAG00000084245 ENSCJAG00000041512 ##29 HSPD1 (ENSCJAG00000003990) #30 COQ10B (ENSCJAG00000039085) #31 SF3B1 (ENSCJAG00000003902) #32 ANKRD44 (ENSCJAG00000003803) #33 Mas night monkey MODERN SPECIES 492 CLK1 (ENSANAG00000027111) #8 BZW1 (ENSANAG00000021489) #9 ENSANAG00000023906 #10 AOX1 (ENSANAG00000025069) #12 SGO2 (ENSANAG00000030373) #13 KCTD18 (ENSANAG00000023292) #15 SPATS2L (ENSANAG00000029380) #16 MAIP1 (ENSANAG00000031625) #18 TYW5 (ENSANAG00000024108) #19 C2orf69 (ENSANAG00000022030) #20 ENSANAG00000023820 SATB2 (ENSANAG00000024206) #22 PLCL1 (ENSANAG00000022909) #24 BOLL (ENSANAG00000031449) #25 ENSANAG00000027174 Tarsier MODERN SPECIES 4981 SATB2 (ENSTSYG00000002539) #22 LYG2 (ENSTSYG00000028650) ENSTSYG00000029768 TXNDC9 (ENSTSYG00000033216) EIF5B (ENSTSYG00000011850) REV1 (ENSTSYG00000011917) AFF3 (ENSTSYG00000029683) Strepsirrhini ANCESTRAL SPECIES 10 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00390000005727.a.b.a.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Bushbaby MODERN SPECIES 128 HYCC2 (ENSOGAG00000012336) ORC2 (ENSOGAG00000012329) NIF3L1 (ENSOGAG00000025311) PPIL3 (ENSOGAG00000007087) #7 CLK1 (ENSOGAG00000012328) #8 BZW1 (ENSOGAG00000012326) #9 AOX2 (ENSOGAG00000025249) #10 AOX4 (ENSOGAG00000030158) #11 AOX1 (ENSOGAG00000006066) #12 SGO2 (ENSOGAG00000006064) #13 KCTD18 (ENSOGAG00000012335) #15 SPATS2L (ENSOGAG00000012331) #16 MAIP1 (ENSOGAG00000006965) #18 C2orf69 (ENSOGAG00000028317) #20 ENSOGAG00000027028 SATB2 (ENSOGAG00000006949) #22 Lemuriformes ANCESTRAL SPECIES 5 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.b ##28 ENSGT00390000006350.m.a.c.b.a.b ##29 ENSGT01050000244956.b.c.a ##28 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.a.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 Mouse lemur MODERN SPECIES 30 ENSMICG00000003372 PPIL3 (ENSMICG00000003367) #7 CLK1 (ENSMICG00000003361) #8 BZW1 (ENSMICG00000003355) #9 ENSMICG00000033651 #10 ENSMICG00000027664 #11 AOX1 (ENSMICG00000005718) #12 SGO2 (ENSMICG00000033463) #13 ENSMICG00000003963 #15 SPATS2L (ENSMICG00000003956) #16 MAIP1 (ENSMICG00000044985) #18 TYW5 (ENSMICG00000046098) #19 C2orf69 (ENSMICG00000035511) #20 ENSMICG00000026608 ENSMICG00000037134 SATB2 (ENSMICG00000009378) #22 PLCL1 (ENSMICG00000011854) #24 BOLL (ENSMICG00000011845) #25 RFTN2 (ENSMICG00000028117) #27 ENSMICG00000037985 ##28 HSPD1 (ENSMICG00000028600) #30 HSPE1 (ENSMICG00000046768) ##29 COQ10B (ENSMICG00000013910) #31 SF3B1 (ENSMICG00000013879) #32 ANKRD44 (ENSMICG00000013853) #33 PGAP1 (ENSMICG00000013824) #36 C2orf66 (ENSMICG00000043136) GTF3C3 (ENSMICG00000013800) CCDC150 (ENSMICG00000013761) HECW2 (ENSMICG00000013727) STK17B (ENSMICG00000013716) ##17 Lemuriformes_a ANCESTRAL SPECIES 15 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.a.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Coquerels sifaka MODERN SPECIES 94 NDUFB3 (ENSPCOG00000020529) HYCC2 (ENSPCOG00000014611) ORC2 (ENSPCOG00000021783) NIF3L1 (ENSPCOG00000018022) PPIL3 (ENSPCOG00000028235) #7 CLK1 (ENSPCOG00000018180) #8 ENSPCOG00000015831 #9 ENSPCOG00000015215 #10 ENSPCOG00000027597 #11 AOX1 (ENSPCOG00000021840) #12 ENSPCOG00000024135 #13 SPATS2L (ENSPCOG00000015945) #16 MAIP1 (ENSPCOG00000008943) #18 C2orf69 (ENSPCOG00000006950) #20 FTCDNL1 (ENSPCOG00000019867) ENSPCOG00000014379 #22 Greater bamboo lemur MODERN SPECIES 225 MAK (ENSPSMG00000025468) TMEM14C (ENSPSMG00000025455) C6orf52 (ENSPSMG00000025442) ENSPSMG00000025433 GCNT2 (ENSPSMG00000025432) HNRNPA1L3 (ENSPSMG00000025423) AOX1 (ENSPSMG00000025393) #12 SGO2 (ENSPSMG00000025322) #13 KCTD18 (ENSPSMG00000025316) #15 SPATS2L (ENSPSMG00000025292) #16 MAIP1 (ENSPSMG00000025245) #18 TYW5 (ENSPSMG00000025236) #19 C2orf69 (ENSPSMG00000025231) #20 FTCDNL1 (ENSPSMG00000025226) SATB2 (ENSPSMG00000025213) #22 PLCL1 (ENSPSMG00000025179) #24 BOLL (ENSPSMG00000025166) #25 MARS2 (ENSPSMG00000025148) #26 RFTN2 (ENSPSMG00000025142) #27 ENSPSMG00000025134 ##28 ENSPSMG00000025114 ##29 ENSPSMG00000025102 #30 COQ10B (ENSPSMG00000025082) #31 SF3B1 (ENSPSMG00000025061) #32 ANKRD44 (ENSPSMG00000025023) #33 PGAP1 (ENSPSMG00000024985) #36 GTF3C3 (ENSPSMG00000024937) CCDC150 (ENSPSMG00000024921) HECW2 (ENSPSMG00000024894) STK17B (ENSPSMG00000024880) ##17 Laurasiatheria ANCESTRAL SPECIES 12 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000008096.B #22 Common shrew MODERN SPECIES 1424 SATB2 (ENSSARG00000014343) #22 Hedgehog MODERN SPECIES 2008 SATB2 (ENSEEUG00000014569) #22 Laurasiatheria_a ANCESTRAL SPECIES 16 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Artiodactyla ANCESTRAL SPECIES 13 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Suina ANCESTRAL SPECIES 3 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.b.a.b ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Pig MODERN SPECIES 6 ORC2 (ENSSSCG00000016098) NIF3L1 (ENSSSCG00000039654) PPIL3 (ENSSSCG00000016096) #7 CLK1 (ENSSSCG00000016095) #8 BZW1 (ENSSSCG00000016094) #9 ENSSSCG00000016093 #10 ENSSSCG00000040051 #11 AOX1 (ENSSSCG00000029606) #12 SGO2 (ENSSSCG00000016092) #13 ENSSSCG00000016091 #15 SPATS2L (ENSSSCG00000016090) #16 MAIP1 (ENSSSCG00000036676) #18 TYW5 (ENSSSCG00000016087) #19 C2orf69 (ENSSSCG00000016086) #20 ENSSSCG00000016085 SATB2 (ENSSSCG00000021657) #22 ENSSSCG00000041534 PLCL1 (ENSSSCG00000016083) #24 ENSSSCG00000061867 BOLL (ENSSSCG00000016082) #25 MARS2 (ENSSSCG00000034494) #26 RFTN2 (ENSSSCG00000037483) #27 MOBKL3 (ENSSSCG00000016079) #28 HSPE1 (ENSSSCG00000016078) ##29 HSPD1 (ENSSSCG00000016077) ##30 COQ10B (ENSSSCG00000016076) #31 ENSSSCG00000063544 #32 ENSSSCG00000016075 #32 ENSSSCG00000051570 ANKRD44 (ENSSSCG00000016074) #33 PGAP1 (ENSSSCG00000016073) #36 Chacoan peccary MODERN SPECIES 91 ORC2 (ENSCWAG00000010595) NIF3L1 (ENSCWAG00000010511) PPIL3 (ENSCWAG00000010443) #7 CLK1 (ENSCWAG00000010341) #8 BZW1 (ENSCWAG00000009955) #9 ENSCWAG00000009721 #10 ENSCWAG00000009483 #11 AOX1 (ENSCWAG00000009210) #12 SGO2 (ENSCWAG00000009111) #13 KCTD18 (ENSCWAG00000009030) #15 SPATS2L (ENSCWAG00000008608) #16 MAIP1 (ENSCWAG00000008554) #18 TYW5 (ENSCWAG00000008494) #19 C2orf69 (ENSCWAG00000008457) #20 FTCDNL1 (ENSCWAG00000008365) SATB2 (ENSCWAG00000008150) #22 PLCL1 (ENSCWAG00000007994) #24 ENSCWAG00000007948 #25 Artiodactyla_a ANCESTRAL SPECIES 13 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Artiodactyla_b ANCESTRAL SPECIES 12 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Cetacea ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b.i.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00390000012561.b.i.a #9 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Odontoceti ANCESTRAL SPECIES 13 ENSGT00940000159152.d.d ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b.i.b #9 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Odontoceti_a ANCESTRAL SPECIES 10 ENSGT00940000159152.d.d ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b.i.b #9 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Odontoceti_b ANCESTRAL SPECIES 12 ENSGT00940000159152.d.d ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b.i.b #9 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000154631.c.b ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Monodontidae ANCESTRAL SPECIES 10 ENSGT00940000159152.d.d ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b.i.b #9 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000154631.c.b ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Beluga whale MODERN SPECIES 84 ENSDLEG00000017782 FAM126B (ENSDLEG00000017730) ORC2 (ENSDLEG00000017685) NIF3L1 (ENSDLEG00000017669) PPIL3 (ENSDLEG00000017637) #7 CLK1 (ENSDLEG00000017601) #8 ENSDLEG00000017537 #9 AOX1 (ENSDLEG00000017388) #12 SGO2 (ENSDLEG00000017351) #13 KCTD18 (ENSDLEG00000017330) #15 SPATS2L (ENSDLEG00000017277) #16 MAIP1 (ENSDLEG00000017256) #18 TYW5 (ENSDLEG00000017244) #19 CUNH2orf69 (ENSDLEG00000017234) #20 ENSDLEG00000017202 SATB2 (ENSDLEG00000017180) #22 ENSDLEG00000017147 PLCL1 (ENSDLEG00000017124) #24 ENSDLEG00000017113 ENSDLEG00000017109 BOLL (ENSDLEG00000017047) #25 MARS2 (ENSDLEG00000017031) #26 RFTN2 (ENSDLEG00000017004) #27 HSPE1 (ENSDLEG00000016991) #28 ENSDLEG00000016973 ##29 HSPD1 (ENSDLEG00000016961) ##30 COQ10B (ENSDLEG00000016950) #31 SF3B1 (ENSDLEG00000016863) #32 ANKRD44 (ENSDLEG00000016735) #33 PGAP1 (ENSDLEG00000016703) #36 GTF3C3 (ENSDLEG00000016677) Narwhal MODERN SPECIES 302 ENSMMNG00015008710 ORC2 (ENSMMNG00015008727) NIF3L1 (ENSMMNG00015008742) PPIL3 (ENSMMNG00015008752) #7 CLK1 (ENSMMNG00015008783) #8 ENSMMNG00015008840 #9 AOX1 (ENSMMNG00015008883) #12 ENSMMNG00015008917 #13 ENSMMNG00015008923 #13 KCTD18 (ENSMMNG00015008930) #15 SPATS2L (ENSMMNG00015008966) #16 MAIP1 (ENSMMNG00015009034) #18 TYW5 (ENSMMNG00015009041) #19 C2orf69 (ENSMMNG00015009051) #20 FTCDNL1 (ENSMMNG00015009064) SATB2 (ENSMMNG00015009088) #22 ENSMMNG00015009121 PLCL1 (ENSMMNG00015009132) #24 ENSMMNG00015009146 MARS2 (ENSMMNG00015009149) #26 RFTN2 (ENSMMNG00015009156) #27 ENSMMNG00015005118 MOB4 (ENSMMNG00015005131) #28 ENSMMNG00015005152 ##29 ENSMMNG00015005160 ##30 COQ10B (ENSMMNG00015005170) #31 SF3B1 (ENSMMNG00015005194) #32 ANKRD44 (ENSMMNG00015005236) #33 PGAP1 (ENSMMNG00015005302) #36 C2orf66 (ENSMMNG00015005331) GTF3C3 (ENSMMNG00015005350) Vaquita MODERN SPECIES 18 ENSPSNG00000017913 ENSPSNG00000017952 ORC2 (ENSPSNG00000017971) NIF3L1 (ENSPSNG00000018036) PPIL3 (ENSPSNG00000018105) #7 CLK1 (ENSPSNG00000018159) #8 ENSPSNG00000018409 #9 AOX1 (ENSPSNG00000018708) #12 SGO2 (ENSPSNG00000018985) #13 KCTD18 (ENSPSNG00000019019) #15 SPATS2L (ENSPSNG00000019081) #16 MAIP1 (ENSPSNG00000019254) #18 TYW5 (ENSPSNG00000019307) #19 C2orf69 (ENSPSNG00000019348) #20 ENSPSNG00000019397 SATB2 (ENSPSNG00000019498) #22 ENSPSNG00000019635 PLCL1 (ENSPSNG00000019688) #24 ENSPSNG00000019773 BOLL (ENSPSNG00000019819) #25 MARS2 (ENSPSNG00000020001) #26 RFTN2 (ENSPSNG00000020023) #27 MOB4 (ENSPSNG00000020101) #28 HSPD1 (ENSPSNG00000020243) ##30 ENSPSNG00000020315 ##29 COQ10B (ENSPSNG00000020376) #31 SF3B1 (ENSPSNG00000020453) #32 ANKRD44 (ENSPSNG00000020570) #33 PGAP1 (ENSPSNG00000020691) #36 C2orf66 (ENSPSNG00000020837) GTF3C3 (ENSPSNG00000002123) Dolphin MODERN SPECIES 16 SATB2 (ENSTTRG00000001254) #22 Sperm whale MODERN SPECIES 11 ENSPCTG00005001851 FAM126B (ENSPCTG00005001830) ORC2 (ENSPCTG00005001802) NIF3L1 (ENSPCTG00005001774) PPIL3 (ENSPCTG00005001749) #7 CLK1 (ENSPCTG00005001575) #8 BZW1 (ENSPCTG00005001498) #9 AOX1 (ENSPCTG00005001418) #12 SGO2 (ENSPCTG00005001385) #13 KCTD18 (ENSPCTG00005001363) #15 SPATS2L (ENSPCTG00005001213) #16 MAIP1 (ENSPCTG00005001167) #18 TYW5 (ENSPCTG00005001148) #19 C2H2orf69 (ENSPCTG00005001135) #20 ENSPCTG00005001114 SATB2 (ENSPCTG00005001020) #22 PLCL1 (ENSPCTG00005000965) #24 BOLL (ENSPCTG00005000834) #25 MARS2 (ENSPCTG00005000802) #26 RFTN2 (ENSPCTG00005000782) #27 MOB4 (ENSPCTG00005000750) #28 HSPE1 (ENSPCTG00005000700) ##29 HSPD1 (ENSPCTG00005000653) ##30 COQ10B (ENSPCTG00005000606) #31 SF3B1 (ENSPCTG00005000567) #32 ANKRD44 (ENSPCTG00005000458) #33 PGAP1 (ENSPCTG00005000363) #36 C2orf66 (ENSPCTG00005000282) GTF3C3 (ENSPCTG00005000262) ENSPCTG00005000238 ENSPCTG00005000224 Blue whale MODERN SPECIES 18 ORC2 (ENSBMSG00010003997) NIF3L1 (ENSBMSG00010003954) PPIL3 (ENSBMSG00010003923) #7 CLK1 (ENSBMSG00010003860) #8 ENSBMSG00010003785 #9 ENSBMSG00010003674 #10 AOX1 (ENSBMSG00010003482) #12 ENSBMSG00010003395 #13 ENSBMSG00010003382 #13 KCTD18 (ENSBMSG00010003365) #15 SPATS2L (ENSBMSG00010003251) #16 MAIP1 (ENSBMSG00010003193) #18 TYW5 (ENSBMSG00010003179) #19 C2orf69 (ENSBMSG00010003167) #20 FTCDNL1 (ENSBMSG00010003148) SATB2 (ENSBMSG00010003076) #22 PLCL1 (ENSBMSG00010002964) #24 BOLL (ENSBMSG00010002886) #25 MARS2 (ENSBMSG00010002857) #26 RFTN2 (ENSBMSG00010002848) #27 MOB4 (ENSBMSG00010002811) #28 ENSBMSG00010002778 ##29 HSPD1 (ENSBMSG00010002754) ##30 COQ10B (ENSBMSG00010002718) #31 SF3B1 (ENSBMSG00010002624) #32 ENSBMSG00010002564 ANKRD44 (ENSBMSG00010002506) #33 PGAP1 (ENSBMSG00010002370) #36 C2orf66 (ENSBMSG00010002279) GTF3C3 (ENSBMSG00010002241) CCDC150 (ENSBMSG00010002134) Pecora ANCESTRAL SPECIES 16 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Percora_a ANCESTRAL SPECIES 5 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Bovidae ANCESTRAL SPECIES 8 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Bovinae ANCESTRAL SPECIES 5 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Bos ANCESTRAL SPECIES 6 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.g #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Bos_a ANCESTRAL SPECIES 4 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.g #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Wild yak MODERN SPECIES 690 AOX1 (ENSBMUG00000000894) #12 SGO2 (ENSBMUG00000000973) #13 KCTD18 (ENSBMUG00000001001) #15 SPATS2L (ENSBMUG00000001103) #16 MAIP1 (ENSBMUG00000001172) #18 TYW5 (ENSBMUG00000001180) #19 C2orf69 (ENSBMUG00000001195) #20 FTCDNL1 (ENSBMUG00000001215) SATB2 (ENSBMUG00000001288) #22 PLCL1 (ENSBMUG00000001392) #24 Domestic yak MODERN SPECIES 11 NIF3L1 (ENSBGRG00000022968) ENSBGRG00000023065 CLK1 (ENSBGRG00000023102) #8 BZW1 (ENSBGRG00000023222) #9 ENSBGRG00000023761 #10 ENSBGRG00000026310 #11 ENSBGRG00000026671 AOX1 (ENSBGRG00000026674) #12 SGO2 (ENSBGRG00000026677) #13 KCTD18 (ENSBGRG00000026680) #15 SPATS2L (ENSBGRG00000026684) #16 MAIP1 (ENSBGRG00000026693) #18 TYW5 (ENSBGRG00000026697) #19 C2orf69 (ENSBGRG00000026703) #20 FTCDNL1 (ENSBGRG00000026708) SATB2 (ENSBGRG00000026716) #22 ENSBGRG00000000192 PLCL1 (ENSBGRG00000000210) #24 BOLL (ENSBGRG00000000262) #25 MARS2 (ENSBGRG00000000375) #26 RFTN2 (ENSBGRG00000000406) #27 ENSBGRG00000000487 #28 HSPE1 (ENSBGRG00000000521) ##29 HSPD1 (ENSBGRG00000000539) ##30 COQ10B (ENSBGRG00000000566) #31 SF3B1 (ENSBGRG00000000604) #32 ANKRD44 (ENSBGRG00000000733) #33 PGAP1 (ENSBGRG00000000882) #36 C2orf66 (ENSBGRG00000001016) GTF3C3 (ENSBGRG00000001029) ENSBGRG00000001058 Bos_b ANCESTRAL SPECIES 3 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.g #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b.a ##30 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00940000162534.b ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Cow MODERN SPECIES 11 PPIL3 (ENSBTAG00000005416) CLK1 (ENSBTAG00000005408) #8 BZW1 (ENSBTAG00000006049) #9 AOX2 (ENSBTAG00000026812) #10 AOX4 (ENSBTAG00000038878) #11 ENSBTAG00000047849 AOX1 (ENSBTAG00000009725) #12 SGO2 (ENSBTAG00000031579) #13 KCTD18 (ENSBTAG00000002272) #15 SPATS2L (ENSBTAG00000016092) #16 ENSBTAG00000024003 MAIP1 (ENSBTAG00000019231) #18 TYW5 (ENSBTAG00000019232) #19 C2H2orf69 (ENSBTAG00000009952) #20 ENSBTAG00000031595 SATB2 (ENSBTAG00000016334) #22 PLCL1 (ENSBTAG00000007635) #24 BOLL (ENSBTAG00000031614) #25 MARS2 (ENSBTAG00000002056) #26 RFTN2 (ENSBTAG00000007652) #27 MOB4 (ENSBTAG00000019116) #28 HSPE1 (ENSBTAG00000012589) ##29 HSPD1 (ENSBTAG00000012586) ##30 COQ10B (ENSBTAG00000004659) #31 SF3B1 (ENSBTAG00000008915) #32 ENSBTAG00000012171 ANKRD44 (ENSBTAG00000031696) #33 PGAP1 (ENSBTAG00000020416) #36 GTF3C3 (ENSBTAG00000007779) CCDC150 (ENSBTAG00000017695) HECW2 (ENSBTAG00000020696) Hybrid Bos Indicus MODERN SPECIES 11 NIF3L1 (ENSBIXG00005031554) PPIL3 (ENSBIXG00005031553) #7 CLK1 (ENSBIXG00005031552) #8 BZW1 (ENSBIXG00005031551) #9 ENSBIXG00005031550 #10 ENSBIXG00005030534 #11 AOX1 (ENSBIXG00005008599) #12 SGO2 (ENSBIXG00005008643) #13 KCTD18 (ENSBIXG00005005902) #15 ENSBIXG00005008660 SPATS2L (ENSBIXG00005008726) #16 MAIP1 (ENSBIXG00005008787) #18 TYW5 (ENSBIXG00005008805) #19 C2orf69 (ENSBIXG00005008818) #20 FTCDNL1 (ENSBIXG00005008837) SATB2 (ENSBIXG00005008954) #22 PLCL1 (ENSBIXG00005009092) #24 ENSBIXG00005009140 BOLL (ENSBIXG00005009209) #25 MARS2 (ENSBIXG00005009234) #26 RFTN2 (ENSBIXG00005009241) #27 MOB4 (ENSBIXG00005009278) #28 ENSBIXG00005009301 ##29 ENSBIXG00005009345 ##30 COQ10B (ENSBIXG00005009394) #31 SF3B1 (ENSBIXG00005000503) #32 ENSBIXG00005009496 ANKRD44 (ENSBIXG00005009540) #33 PGAP1 (ENSBIXG00005009684) #36 C2orf66 (ENSBIXG00005009722) GTF3C3 (ENSBIXG00005005945) American bison MODERN SPECIES 3330 CLK1 (ENSBBBG00000002583) #8 BZW1 (ENSBBBG00000013019) #9 ENSBBBG00000013042 #10 ENSBBBG00000013095 #11 ENSBBBG00000002631 AOX1 (ENSBBBG00000013130) #12 ENSBBBG00000013142 #13 ENSBBBG00000013146 #13 KCTD18 (ENSBBBG00000013155) #15 ENSBBBG00000013159 SPATS2L (ENSBBBG00000013236) #16 MAIP1 (ENSBBBG00000001643) #18 TYW5 (ENSBBBG00000013257) #19 C2orf69 (ENSBBBG00000002681) #20 FTCDNL1 (ENSBBBG00000008285) SATB2 (ENSBBBG00000013343) #22 PLCL1 (ENSBBBG00000002738) #24 BOLL (ENSBBBG00000013412) #25 MARS2 (ENSBBBG00000013415) #26 RFTN2 (ENSBBBG00000002765) #27 MOB4 (ENSBBBG00000013501) #28 ENSBBBG00000013516 ##29 HSPD1 (ENSBBBG00000013534) ##30 ENSBBBG00000007252 #31 ENSBBBG00000013596 #32 ENSBBBG00000013601 ANKRD44 (ENSBBBG00000013667) #33 PGAP1 (ENSBBBG00000013723) #36 C2orf66 (ENSBBBG00000013730) GTF3C3 (ENSBBBG00000002934) ENSBBBG00000013757 Caprinae ANCESTRAL SPECIES 5 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493.h #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.e #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367.s #31 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Rambouillet Sheep MODERN SPECIES 11 NIF3L1 (ENSOARG00020016593) PPIL3 (ENSOARG00020016501) #7 CLK1 (ENSOARG00020016395) #8 BZW1 (ENSOARG00020015764) #9 ENSOARG00020015365 #10 ENSOARG00020015282 ENSOARG00020015070 #11 AOX1 (ENSOARG00020014833) #12 ENSOARG00020014683 #15 ENSOARG00020014668 SPATS2L (ENSOARG00020014270) #16 MAIP1 (ENSOARG00020014186) #18 TYW5 (ENSOARG00020014145) #19 C2orf69 (ENSOARG00020014115) #20 FTCDNL1 (ENSOARG00020013918) SATB2 (ENSOARG00020013534) #22 ENSOARG00020013422 ENSOARG00020013393 ENSOARG00020013380 ENSOARG00020013353 ENSOARG00020013326 ENSOARG00020013287 BOLL (ENSOARG00020012643) #25 MARS2 (ENSOARG00020012596) #26 RFTN2 (ENSOARG00020012524) #27 ENSOARG00020012334 #28 HSP10 (ENSOARG00020012227) ##29 ENSOARG00020012172 ##30 COQ10B (ENSOARG00020011999) #31 SF3B1 (ENSOARG00020011806) #32 ANKRD44 (ENSOARG00020010197) #33 Goat MODERN SPECIES 11 NIF3L1 (ENSCHIG00000009478) PPIL3 (ENSCHIG00000019642) #7 CLK1 (ENSCHIG00000018314) #8 BZW1 (ENSCHIG00000019964) #9 ENSCHIG00000020570 #10 ENSCHIG00000013677 #11 ENSCHIG00000019390 AOX1 (ENSCHIG00000013439) #12 SGO2 (ENSCHIG00000013638) #13 KCTD18 (ENSCHIG00000022753) #15 SPATS2L (ENSCHIG00000026377) #16 MAIP1 (ENSCHIG00000007507) #18 ENSCHIG00000017324 #19 ENSCHIG00000011016 #20 FTCDNL1 (ENSCHIG00000022126) SATB2 (ENSCHIG00000022376) #22 PLCL1 (ENSCHIG00000013331) #24 ENSCHIG00000011685 ENSCHIG00000021317 BOLL (ENSCHIG00000024995) #25 MARS2 (ENSCHIG00000016548) #26 RFTN2 (ENSCHIG00000012903) #27 ENSCHIG00000026973 #28 HSPE1 (ENSCHIG00000009467) ##29 HSPD1 (ENSCHIG00000004382) ##30 ENSCHIG00000020913 #31 SF3B1 (ENSCHIG00000015226) #32 ANKRD44 (ENSCHIG00000017665) #33 ENSCHIG00000012550 PGAP1 (ENSCHIG00000018177) #36 GTF3C3 (ENSCHIG00000016485) Siberian musk deer MODERN SPECIES 351 PPIL3 (ENSMMSG00000024329) #7 CLK1 (ENSMMSG00000024326) #8 ENSMMSG00000024321 #9 ENSMMSG00000024314 #10 ENSMMSG00000013161 #11 ENSMMSG00000012463 AOX1 (ENSMMSG00000012371) #12 SGO2 (ENSMMSG00000012334) #13 KCTD18 (ENSMMSG00000012309) #15 SPATS2L (ENSMMSG00000011944) #16 MAIP1 (ENSMMSG00000011886) #18 TYW5 (ENSMMSG00000011859) #19 C2orf69 (ENSMMSG00000011836) #20 ENSMMSG00000011819 ENSMMSG00000011780 SATB2 (ENSMMSG00000011682) #22 Yarkand deer MODERN SPECIES 31 ENSCHYG00000004999 BZW1 (ENSCHYG00000009251) #9 ENSCHYG00000009654 #10 ENSCHYG00000009851 #11 ENSCHYG00000010410 ENSCHYG00000010452 AOX1 (ENSCHYG00000010517) #12 SGO2 (ENSCHYG00000011236) #13 KCTD18 (ENSCHYG00000011325) #15 SPATS2L (ENSCHYG00000011390) #16 ENSCHYG00000011736 MAIP1 (ENSCHYG00000011759) #18 TYW5 (ENSCHYG00000011850) #19 C2orf69 (ENSCHYG00000011903) #20 ENSCHYG00000011965 SATB2 (ENSCHYG00000012100) #22 ENSCHYG00000012371 PLCL1 (ENSCHYG00000012427) #24 BOLL (ENSCHYG00000012765) #25 MARS2 (ENSCHYG00000013177) #26 RFTN2 (ENSCHYG00000013201) #27 MOB4 (ENSCHYG00000013303) #28 ENSCHYG00000013442 ##29 ENSCHYG00000013593 ##30 ENSCHYG00000013673 #31 SF3B1 (ENSCHYG00000013853) #32 ANKRD44 (ENSCHYG00000014222) #33 PGAP1 (ENSCHYG00000015550) #36 C2orf66 (ENSCHYG00000015983) GTF3C3 (ENSCHYG00000016098) CCDC150 (ENSCHYG00000016506) Camelidae ANCESTRAL SPECIES 58 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000006350.m.a.c.b.a.b ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Arabian camel MODERN SPECIES 31 PPIL3 (ENSCDRG00005007234) #7 CLK1 (ENSCDRG00005007272) #8 BZW1 (ENSCDRG00005008038) #9 ENSCDRG00005008482 #10 ENSCDRG00005008740 #11 AOX1 (ENSCDRG00005009121) #12 ENSCDRG00005009409 #13 ENSCDRG00005009460 #13 KCTD18 (ENSCDRG00005009496) #15 SPATS2L (ENSCDRG00005009592) #16 ENSCDRG00005010296 MAIP1 (ENSCDRG00005010319) #18 TYW5 (ENSCDRG00005010376) #19 C2orf69 (ENSCDRG00005010427) #20 FTCDNL1 (ENSCDRG00005010462) SATB2 (ENSCDRG00005010563) #22 PLCL1 (ENSCDRG00005010932) #24 BOLL (ENSCDRG00005011111) #25 MARS2 (ENSCDRG00005011548) #26 RFTN2 (ENSCDRG00005011566) #27 MOB4 (ENSCDRG00005011619) #28 HSPE1 (ENSCDRG00005011802) ##29 HSPD1 (ENSCDRG00005011897) ##30 COQ10B (ENSCDRG00005012028) #31 ENSCDRG00005012185 SF3B1 (ENSCDRG00005012215) #32 ANKRD44 (ENSCDRG00005012443) #33 PGAP1 (ENSCDRG00005012687) #36 C2orf66 (ENSCDRG00005012843) GTF3C3 (ENSCDRG00005012878) CCDC150 (ENSCDRG00005012991) Alpaca MODERN SPECIES 63 MAIP1 (ENSVPAG00000007005) #18 TYW5 (ENSVPAG00000007004) #19 C2orf69 (ENSVPAG00000007002) #20 SATB2 (ENSVPAG00000007001) #22 Laurasiatheria_b ANCESTRAL SPECIES 16 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Carnivora ANCESTRAL SPECIES 17 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Caniformia ANCESTRAL SPECIES 14 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.b ##29 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Caniformia_b ANCESTRAL SPECIES 13 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00390000004856.w.b ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Ursidae ANCESTRAL SPECIES 7 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b.f #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00390000004856.w.b ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393.p #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Ursus ANCESTRAL SPECIES 4 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b.f #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01010000225408 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00940000154276.kb.a.b ENSGT00390000004856.w.b ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393.p #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 American black bear MODERN SPECIES 846 ENSUAMG00000028250 SATB2 (ENSUAMG00000028249) #22 Polar bear MODERN SPECIES 142 ORC2 (ENSUMAG00000021479) PPIL3 (ENSUMAG00000021460) #7 NIF3L1 (ENSUMAG00000021455) CLK1 (ENSUMAG00000021445) #8 BZW1 (ENSUMAG00000021441) #9 ENSUMAG00000021399 #10 ENSUMAG00000021134 #11 AOX1 (ENSUMAG00000021073) #12 SGO2 (ENSUMAG00000021068) #13 KCTD18 (ENSUMAG00000021066) #15 SPATS2L (ENSUMAG00000021060) #16 MAIP1 (ENSUMAG00000021043) #18 TYW5 (ENSUMAG00000021039) #19 C2orf69 (ENSUMAG00000021037) #20 FTCDNL1 (ENSUMAG00000021033) SATB2 (ENSUMAG00000021003) #22 PLCL1 (ENSUMAG00000020984) #24 ENSUMAG00000020978 ENSUMAG00000020976 BOLL (ENSUMAG00000020969) #25 MARS2 (ENSUMAG00000020961) #26 RFTN2 (ENSUMAG00000020958) #27 MOB4 (ENSUMAG00000020955) #28 HSPE1 (ENSUMAG00000020954) ##29 HSPD1 (ENSUMAG00000020952) ##30 COQ10B (ENSUMAG00000020949) #31 SF3B1 (ENSUMAG00000020945) #32 ANKRD44 (ENSUMAG00000020937) #33 PGAP1 (ENSUMAG00000020815) #36 GTF3C3 (ENSUMAG00000020787) CCDC150 (ENSUMAG00000020726) Giant Panda MODERN SPECIES 11 ORC2 (ENSAMEG00000005940) NIF3L1 (ENSAMEG00000005921) PPIL3 (ENSAMEG00000005917) #7 CLK1 (ENSAMEG00000005887) #8 BZW1 (ENSAMEG00000005859) #9 AOX2 (ENSAMEG00000005633) #10 AOX4 (ENSAMEG00000005561) #11 AOX1 (ENSAMEG00000005445) #12 SGO2 (ENSAMEG00000005435) #13 KCTD18 (ENSAMEG00000005423) #15 SPATS2L (ENSAMEG00000005405) #16 MAIP1 (ENSAMEG00000005390) #18 TYW5 (ENSAMEG00000005386) #19 C2orf69 (ENSAMEG00000005381) #20 ENSAMEG00000023460 SATB2 (ENSAMEG00000005350) #22 ENSAMEG00000019732 PLCL1 (ENSAMEG00000013707) #24 BOLL (ENSAMEG00000013712) #25 MARS2 (ENSAMEG00000019748) #26 RFTN2 (ENSAMEG00000013737) #27 MOB4 (ENSAMEG00000013751) #28 ENSAMEG00000013769 #29 HSPD1 (ENSAMEG00000013770) ##30 COQ10B (ENSAMEG00000013802) #31 SF3B1 (ENSAMEG00000013809) #32 ANKRD44 (ENSAMEG00000013836) #33 PGAP1 (ENSAMEG00000013887) #36 C2orf66 (ENSAMEG00000013924) GTF3C3 (ENSAMEG00000013925) CCDC150 (ENSAMEG00000013946) Mustelinae ANCESTRAL SPECIES 44 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000163579 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.b.a.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 American mink MODERN SPECIES 40 NIF3L (ENSNVIG00000008895) ENSNVIG00000008933 ENSNVIG00000008938 #8 ENSNVIG00000008952 #8 BZW1 (ENSNVIG00000008992) #9 ENSNVIG00000009087 #10 ENSNVIG00000009216 #11 AOX1 (ENSNVIG00000009846) #12 SGO2 (ENSNVIG00000009949) #13 KCTD18 (ENSNVIG00000009981) #15 SPATS2L (ENSNVIG00000010010) #16 MAIP1 (ENSNVIG00000010220) #18 TYW5 (ENSNVIG00000010238) #19 C2orf69 (ENSNVIG00000010249) #20 ENSNVIG00000010260 SATB2 (ENSNVIG00000010289) #22 PLCL1 (ENSNVIG00000010416) #24 ENSNVIG00000010433 BOLL (ENSNVIG00000010444) #25 MARS2 (ENSNVIG00000010510) #26 RFTN2 (ENSNVIG00000010521) #27 PHOCN (ENSNVIG00000010530) #28 ENSNVIG00000010568 ##29 ENSNVIG00000010575 ##30 COQ10B (ENSNVIG00000010606) #31 SF3B1 (ENSNVIG00000010631) #32 ANKRD44 (ENSNVIG00000010686) #33 PGAP1 (ENSNVIG00000010723) #36 C2orf66 (ENSNVIG00000010821) GTF3C3 (ENSNVIG00000010824) CCDC150 (ENSNVIG00000010849) Ferret MODERN SPECIES 333 SGO2 (ENSMPUG00000008053) #13 KCTD18 (ENSMPUG00000008044) #15 SPATS2L (ENSMPUG00000008030) #16 MAIP1 (ENSMPUG00000008001) #18 TYW5 (ENSMPUG00000007993) #19 C2orf69 (ENSMPUG00000007987) #20 ENSMPUG00000007983 SATB2 (ENSMPUG00000007972) #22 PLCL1 (ENSMPUG00000007965) #24 BOLL (ENSMPUG00000007922) #25 MARS2 (ENSMPUG00000019823) #26 ENSMPUG00000019822 RFTN2 (ENSMPUG00000007918) #27 MOB4 (ENSMPUG00000007910) #28 ENSMPUG00000007818 ##30 COQ10B (ENSMPUG00000007810) #31 SF3B1 (ENSMPUG00000007799) #32 ANKRD44 (ENSMPUG00000007785) #33 PGAP1 (ENSMPUG00000007770) #36 GTF3C3 (ENSMPUG00000007764) CCDC150 (ENSMPUG00000007750) HECW2 (ENSMPUG00000007553) STK17B (ENSMPUG00000007548) ##17 Canidae ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01070000254992 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.b ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Canis_lupus ANCESTRAL SPECIES 32 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b.c #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000182922.a.a.a.b.a.a.b ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT01070000254992 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.b ##29 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Dingo MODERN SPECIES 398 HYCC2 (ENSCAFG00020003567) ORC2 (ENSCAFG00020003630) NIF3L1 (ENSCAFG00020004364) PPIL3 (ENSCAFG00020004369) #7 CLK1 (ENSCAFG00020004400) #8 ENSCAFG00020004433 #9 ENSCAFG00020004462 #10 ENSCAFG00020004494 #11 ENSCAFG00020004535 SGO2 (ENSCAFG00020004540) #13 KCTD18 (ENSCAFG00020004542) #15 SPATS2L (ENSCAFG00020004547) #16 MAIP1 (ENSCAFG00020004558) #18 ENSCAFG00020004570 #19 C2orf69 (ENSCAFG00020004572) #20 SATB2 (ENSCAFG00020004584) #22 PLCL1 (ENSCAFG00020004643) #24 ENSCAFG00020004654 BOLL (ENSCAFG00020004659) #25 MARS2 (ENSCAFG00020004676) #26 RFTN2 (ENSCAFG00020004690) #27 MOB4 (ENSCAFG00020004694) #28 ENSCAFG00020004700 ##29 HSPD1 (ENSCAFG00020004710) ##30 ENSCAFG00020004741 COQ10B (ENSCAFG00020004745) #31 SF3B1 (ENSCAFG00020004750) #32 ANKRD44 (ENSCAFG00020004766) #33 PGAP1 (ENSCAFG00020004924) #36 GTF3C3 (ENSCAFG00020004945) CCDC150 (ENSCAFG00020004958) Dog MODERN SPECIES 30 ORC2 (ENSCAFG00845029735) NIF3L1 (ENSCAFG00845029603) PPIL3 (ENSCAFG00845029569) #7 CLK1 (ENSCAFG00845029455) #8 ENSCAFG00845029244 #9 AOX2 (ENSCAFG00845029172) #10 AOX4 (ENSCAFG00845028797) #11 RPL21 (ENSCAFG00845028706) SGO2 (ENSCAFG00845028523) #13 KCTD18 (ENSCAFG00845028480) #15 ENSCAFG00845028453 SPATS2L (ENSCAFG00845028292) #16 MAIP1 (ENSCAFG00845028191) #18 TYW5 (ENSCAFG00845028098) #19 C2orf69 (ENSCAFG00845028048) #20 SATB2 (ENSCAFG00845027789) #22 PLCL1 (ENSCAFG00845027611) #24 BOLL (ENSCAFG00845027465) #25 MARS2 (ENSCAFG00845027432) #26 RFTN2 (ENSCAFG00845027373) #27 ENSCAFG00845027301 HSPE1 (ENSCAFG00845027216) #28 HSPD1 (ENSCAFG00845027075) ##30 SF3B1 (ENSCAFG00845026632) #32 COQ10B (ENSCAFG00845026337) #31 ENSCAFG00845026214 ANKRD44 (ENSCAFG00845025354) #33 PGAP1 (ENSCAFG00845024751) #36 C2orf66 (ENSCAFG00845024629) GTF3C3 (ENSCAFG00845024524) CCDC150 (ENSCAFG00845023218) Red fox MODERN SPECIES 41 ORC2 (ENSVVUG00000018996) NIF3L1 (ENSVVUG00000019010) PPIL3 (ENSVVUG00000019021) #7 CLK1 (ENSVVUG00000019051) #8 ENSVVUG00000019055 BZW1 (ENSVVUG00000019058) #9 ENSVVUG00000019458 #10 ENSVVUG00000025395 #11 SGO2 (ENSVVUG00000025845) #13 KCTD18 (ENSVVUG00000025846) #15 ENSVVUG00000025847 SPATS2L (ENSVVUG00000025851) #16 MAIP1 (ENSVVUG00000025867) #18 TYW5 (ENSVVUG00000025871) #19 C2orf69 (ENSVVUG00000025875) #20 SATB2 (ENSVVUG00000025880) #22 ENSVVUG00000025893 PLCL1 (ENSVVUG00000025896) #24 ENSVVUG00000025899 BOLL (ENSVVUG00000025901) #25 MARS2 (ENSVVUG00000025921) #26 RFTN2 (ENSVVUG00000025925) #27 MOB4 (ENSVVUG00000025930) #28 ENSVVUG00000025937 ##29 HSPD1 (ENSVVUG00000025940) ##30 COQ10B (ENSVVUG00000025944) #31 SF3B1 (ENSVVUG00000025948) #32 ANKRD44 (ENSVVUG00000025957) #33 PGAP1 (ENSVVUG00000025981) #36 GTF3C3 (ENSVVUG00000025988) CCDC150 (ENSVVUG00000025997) Felidae ANCESTRAL SPECIES 15 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00940000154107.b #13 ENSGT00530000064234.k #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00390000004856.w.b ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367.o #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 Panthera ANCESTRAL SPECIES 9 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00940000154107.b #13 ENSGT00530000064234.k #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00390000004856.w.b ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367.o #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Panthera_a ANCESTRAL SPECIES 6 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00940000154107.b #13 ENSGT00530000064234.k #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00390000004856.w.b ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367.o #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 lion MODERN SPECIES 8 NDUFB3 (ENSPLOG00000015772) HYCC2 (ENSPLOG00000015803) ORC2 (ENSPLOG00000015970) NIF3L1 (ENSPLOG00000016032) PPIL3 (ENSPLOG00000016086) #7 CLK1 (ENSPLOG00000016118) #8 BZW1 (ENSPLOG00000016320) #9 ENSPLOG00000016579 #10 SGO2 (ENSPLOG00000016840) #13 KCTD18 (ENSPLOG00000016872) #15 SPATS2L (ENSPLOG00000016944) #16 MAIP1 (ENSPLOG00000010863) #18 TYW5 (ENSPLOG00000010891) #19 C2orf69 (ENSPLOG00000010947) #20 FTCDNL1 (ENSPLOG00000010989) SATB2 (ENSPLOG00000011078) #22 PLCL1 (ENSPLOG00000011340) #24 ENSPLOG00000011407 BOLL (ENSPLOG00000011460) #25 MARS2 (ENSPLOG00000011689) #26 RFTN2 (ENSPLOG00000011715) #27 MOB4 (ENSPLOG00000011894) #28 ENSPLOG00000012097 ##29 HSPD1 (ENSPLOG00000012200) ##30 ENSPLOG00000012317 #31 ENSPLOG00000012415 SF3B1 (ENSPLOG00000012481) #32 ANKRD44 (ENSPLOG00000012744) #33 PGAP1 (ENSPLOG00000012908) #36 GTF3C3 (ENSPLOG00000013217) CCDC150 (ENSPLOG00000013330) leopard MODERN SPECIES 115 HYCC2 (ENSPPRG00000010091) ORC2 (ENSPPRG00000010416) NIF3L1 (ENSPPRG00000011329) PPIL3 (ENSPPRG00000011604) #7 CLK1 (ENSPPRG00000018038) #8 BZW1 (ENSPPRG00000021144) #9 ENSPPRG00000001179 #10 ENSPPRG00000002911 #11 SGO2 (ENSPPRG00000003606) #13 KCTD18 (ENSPPRG00000003708) #15 SPATS2L (ENSPPRG00000005755) #16 MAIP1 (ENSPPRG00000005920) #18 TYW5 (ENSPPRG00000005974) #19 C2orf69 (ENSPPRG00000006014) #20 FTCDNL1 (ENSPPRG00000006344) SATB2 (ENSPPRG00000006763) #22 ENSPPRG00000006827 ENSPPRG00000018398 PLCL1 (ENSPPRG00000006990) #24 BOLL (ENSPPRG00000007352) #25 MARS2 (ENSPPRG00000018464) #26 RFTN2 (ENSPPRG00000007473) #27 ENSPPRG00000007733 ##29 MOB4 (ENSPPRG00000008095) #28 ENSPPRG00000008279 ##30 ENSPPRG00000018513 ENSPPRG00000008688 #31 SF3B1 (ENSPPRG00000009090) #32 ANKRD44 (ENSPPRG00000009896) #33 PGAP1 (ENSPPRG00000010301) #36 C2orf66 (ENSPPRG00000010325) Tiger MODERN SPECIES 481 ENSPTIG00000017025 #15 SPATS2L (ENSPTIG00000009880) #16 MAIP1 (ENSPTIG00000007574) #18 TYW5 (ENSPTIG00000005502) #19 C2orf69 (ENSPTIG00000004162) #20 FTCDNL1 (ENSPTIG00000019386) SATB2 (ENSPTIG00000015066) #22 PLCL1 (ENSPTIG00000013578) #24 BOLL (ENSPTIG00000011925) #25 RFTN2 (ENSPTIG00000010229) #27 MOB4 (ENSPTIG00000008517) #28 HSPE1 (ENSPTIG00000007777) ##29 HSPD1 (ENSPTIG00000006760) ##30 ENSPTIG00000004508 #31 SF3B1 (ENSPTIG00000021557) #32 ANKRD44 (ENSPTIG00000018232) #33 PGAP1 (ENSPTIG00000013798) #36 C2orf66 (ENSPTIG00000013318) GTF3C3 (ENSPTIG00000011830) CCDC150 (ENSPTIG00000010300) ENSPTIG00000007344 HECW2 (ENSPTIG00000004499) Laurasiatheria_c ANCESTRAL SPECIES 18 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Chiroptera ANCESTRAL SPECIES 11 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.b ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367.r #31 ENSGT00390000018393 #32 ENSGT00950000182908.D.f #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Megabat MODERN SPECIES 173 SATB2 (ENSPVAG00000012029) #22 Microchiroptera ANCESTRAL SPECIES 15 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.d ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367.r #31 ENSGT00390000018393 #32 ENSGT00950000182908.D.f #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 Greater horseshoe bat MODERN SPECIES 26 ORC2 (ENSRFEG00010017722) NIF3L1 (ENSRFEG00010017775) PPIL3 (ENSRFEG00010017851) #7 CLK1 (ENSRFEG00010017933) #8 BZW1 (ENSRFEG00010018183) #9 ENSRFEG00010018448 #10 ENSRFEG00010019480 #11 AOX1 (ENSRFEG00010021989) #12 SGO2 (ENSRFEG00010022000) #13 KCTD18 (ENSRFEG00010022002) #15 SPATS2L (ENSRFEG00010022016) #16 MAIP1 (ENSRFEG00010022032) #18 TYW5 (ENSRFEG00010022036) #19 C2orf69 (ENSRFEG00010022039) #20 FTCDNL1 (ENSRFEG00010022040) SATB2 (ENSRFEG00010022046) #22 PLCL1 (ENSRFEG00010022056) #24 BOLL (ENSRFEG00010022065) #25 MARS2 (ENSRFEG00010022069) #26 RFTN2 (ENSRFEG00010022072) #27 ENSRFEG00010022073 MOB4 (ENSRFEG00010022077) #28 ENSRFEG00010022080 ##29 HSPD1 (ENSRFEG00010022083) ##30 ENSRFEG00010022086 #31 SF3B1 (ENSRFEG00010022087) #32 ANKRD44 (ENSRFEG00010022091) #33 PGAP1 (ENSRFEG00010022103) #36 GTF3C3 (ENSRFEG00010022114) CCDC150 (ENSRFEG00010022122) HECW2 (ENSRFEG00010022130) Microbat MODERN SPECIES 940 ORC2 (ENSMLUG00000001662) NIF3L1 (ENSMLUG00000001658) PPIL3 (ENSMLUG00000013189) #7 CLK1 (ENSMLUG00000000344) #8 BZW1 (ENSMLUG00000001653) #9 ENSMLUG00000022412 #10 ENSMLUG00000027760 #11 AOX1 (ENSMLUG00000016684) #12 SGO2 (ENSMLUG00000004245) #13 KCTD18 (ENSMLUG00000006605) #15 SPATS2L (ENSMLUG00000006594) #16 MAIP1 (ENSMLUG00000015960) #18 TYW5 (ENSMLUG00000015955) #19 C2orf69 (ENSMLUG00000026751) #20 ENSMLUG00000011411 SATB2 (ENSMLUG00000001554) #22 PLCL1 (ENSMLUG00000002677) #24 BOLL (ENSMLUG00000004999) #25 RFTN2 (ENSMLUG00000004991) #27 MOB4 (ENSMLUG00000004971) #28 ENSMLUG00000000883 HSPE1 (ENSMLUG00000000878) ##29 ENSMLUG00000000871 ##30 COQ10B (ENSMLUG00000000865) #31 SF3B1 (ENSMLUG00000000840) #32 ENSMLUG00000005254 ANKRD44 (ENSMLUG00000010842) #33 PGAP1 (ENSMLUG00000010784) #36 GTF3C3 (ENSMLUG00000024692) CCDC150 (ENSMLUG00000001986) HECW2 (ENSMLUG00000007654) Equus ANCESTRAL SPECIES 18 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b.b #12 ENSGT00950000183114.a.b.b.f.b.a #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00390000005254.i.a.b ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 Donkey MODERN SPECIES 24 NIF3L1 (ENSEASG00005001400) CLK1 (ENSEASG00005000996) #8 BZW1 (ENSEASG00005000922) #9 ENSEASG00005021400 #10 ENSEASG00005028089 #11 ENSEASG00005029204 #10 ENSEASG00005024840 #12 ENSEASG00005027058 #12 SGO2 (ENSEASG00005024538) #13 KCTD18 (ENSEASG00005020042) #15 SPATS2L (ENSEASG00005020050) #16 MAIP1 (ENSEASG00005020067) #18 TYW5 (ENSEASG00005026976) #19 C2orf69 (ENSEASG00005031146) #20 ENSEASG00005020080 ENSEASG00005029514 #22 PLCL1 (ENSEASG00005020113) #24 ENSEASG00005020114 BOLL (ENSEASG00005020122) #25 MARS2 (ENSEASG00005020133) #26 RFTN2 (ENSEASG00005020136) #27 MOB4 (ENSEASG00005020142) #28 HSPE1 (ENSEASG00005034821) ##29 ENSEASG00005020152 ##30 COQ10B (ENSEASG00005032559) #31 SF3B1 (ENSEASG00005020159) #32 ENSEASG00005020167 ANKRD44 (ENSEASG00005020169) #33 PGAP1 (ENSEASG00005020202) #36 C2orf66 (ENSEASG00005029887) GTF3C3 (ENSEASG00005020250) Horse MODERN SPECIES 9 CLK1 (ENSECAG00000015355) #8 BZW1 (ENSECAG00000011768) #9 ENSECAG00000015199 #10 AOX4 (ENSECAG00000024701) #11 ENSECAG00000032497 #11 ENSECAG00000058396 ENSECAG00000007830 #12 ENSECAG00000018147 #12 SGO2 (ENSECAG00000006038) #13 KCTD18 (ENSECAG00000001039) #15 SPATS2L (ENSECAG00000018564) #16 MAIP1 (ENSECAG00000050073) #18 TYW5 (ENSECAG00000014128) #19 C18H2orf69 (ENSECAG00000014107) #20 ENSECAG00000013663 SATB2 (ENSECAG00000010043) #22 ENSECAG00000058569 BOLL (ENSECAG00000040654) #25 PLCL1 (ENSECAG00000007274) #24 MARS2 (ENSECAG00000004931) #26 RFTN2 (ENSECAG00000021296) #27 MOB4 (ENSECAG00000015560) #28 ENSECAG00000055696 ENSECAG00000049872 ##29 HSPD1 (ENSECAG00000008968) ##30 COQ10B (ENSECAG00000006436) #31 SF3B1 (ENSECAG00000021657) #32 ENSECAG00000034847 ANKRD44 (ENSECAG00000008835) #33 PGAP1 (ENSECAG00000019980) #36 C2orf66 (ENSECAG00000058124) Atlantogenata ANCESTRAL SPECIES 9 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Xenarthra ANCESTRAL SPECIES 28 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 Sloth MODERN SPECIES 1727 SATB2 (ENSCHOG00000012005) #22 Armadillo MODERN SPECIES 1606 ENSDNOG00000007984 ORC2 (ENSDNOG00000001397) NIF3L1 (ENSDNOG00000042985) PPIL3 (ENSDNOG00000039120) #7 CLK1 (ENSDNOG00000007543) #8 ENSDNOG00000044684 #10 ENSDNOG00000045945 #11 AOX1 (ENSDNOG00000017910) #12 SGO2 (ENSDNOG00000041594) #13 KCTD18 (ENSDNOG00000033036) #15 SPATS2L (ENSDNOG00000011539) #16 MAIP1 (ENSDNOG00000031166) #18 TYW5 (ENSDNOG00000016467) #19 C2orf69 (ENSDNOG00000031567) #20 ENSDNOG00000031405 SATB2 (ENSDNOG00000001292) #22 ENSDNOG00000039662 EGLN2 (ENSDNOG00000044897) RAB4B (ENSDNOG00000035069) MIA (ENSDNOG00000025220) ENSDNOG00000018717 ACTMAP (ENSDNOG00000034966) ITPKC (ENSDNOG00000040932) COQ8B (ENSDNOG00000000156) NUMBL (ENSDNOG00000000154) LTBP4 (ENSDNOG00000045716) SHKBP1 (ENSDNOG00000007810) ENSDNOG00000046051 Afrotheria ANCESTRAL SPECIES 1 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000163579 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Afrotheria_a ANCESTRAL SPECIES 1 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000163579 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a ##29 ENSGT00390000005727.a.b.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Elephant MODERN SPECIES 301 ORC2 (ENSLAFG00000022430) NIF3L1 (ENSLAFG00000009897) ENSLAFG00000009894 CLK1 (ENSLAFG00000009891) #8 BZW1 (ENSLAFG00000009883) #9 ENSLAFG00000026161 #10 ENSLAFG00000028503 #11 AOX1 (ENSLAFG00000007070) #12 SGO2 (ENSLAFG00000028451) #13 KCTD18 (ENSLAFG00000003281) #15 SPATS2L (ENSLAFG00000001437) #16 MAIP1 (ENSLAFG00000011639) #18 TYW5 (ENSLAFG00000018708) #19 C2orf69 (ENSLAFG00000018707) #20 ENSLAFG00000030925 SATB2 (ENSLAFG00000002924) #22 PLCL1 (ENSLAFG00000016349) #24 BOLL (ENSLAFG00000010956) #25 MARS2 (ENSLAFG00000030667) #26 RFTN2 (ENSLAFG00000000141) #27 MOB4 (ENSLAFG00000008054) #28 ENSLAFG00000000057 ##29 HSPD1 (ENSLAFG00000000053) ##30 COQ10B (ENSLAFG00000000052) #31 SF3B1 (ENSLAFG00000001956) #32 ANKRD44 (ENSLAFG00000002537) #33 PGAP1 (ENSLAFG00000022372) #36 GTF3C3 (ENSLAFG00000001792) CCDC150 (ENSLAFG00000008819) HECW2 (ENSLAFG00000011976) STK17B (ENSLAFG00000011972) ##17 Hyrax MODERN SPECIES 1548 SATB2 (ENSPCAG00000012822) #22 Tenrec MODERN SPECIES 1907 SATB2 (ENSETEG00000013425) #22 Marsupialia ANCESTRAL SPECIES 5 ENSGT01050000244869.a.a.a.b.a.a.a.a.a ENSGT01050000244869.a.a.a.b.a.a.a.b.a ENSGT00940000162662 ENSGT01050000244869.a.a.a.b.a.b.d ENSGT01050000244869.a.a.a.b.a.b.c ENSGT01050000244869.a.a.a.b.a.a.a.b.b ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a #29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Marsupialia_b ANCESTRAL SPECIES 3 ENSGT01050000244869.a.a.a.b.a.a.a.a.a ENSGT01050000244869.a.a.a.b.a.a.a.b.a ENSGT00940000162662 ENSGT01050000244869.a.a.a.b.a.b.d ENSGT01050000244869.a.a.a.b.a.b.c ENSGT01050000244869.a.a.a.b.a.a.b.c ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a #29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Diprotodontia ANCESTRAL SPECIES 11 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a #29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Diprotodontia_a ANCESTRAL SPECIES 9 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.b #29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00390000015052.j.b koala MODERN SPECIES 52 SATB2 (ENSPCIG00000011693) #22 ENSPCIG00000014254 PLCL1 (ENSPCIG00000015570) #24 ENSPCIG00000010605 #25 MARS2 (ENSPCIG00000010610) #26 RFTN2 (ENSPCIG00000010611) #27 ENSPCIG00000010617 #28 ENSPCIG00000010634 #29 HSPD1 (ENSPCIG00000010636) ##30 COQ10B (ENSPCIG00000010639) #31 ENSPCIG00000032633 SF3B1 (ENSPCIG00000010642) #32 ANKRD44 (ENSPCIG00000010651) #33 PGAP1 (ENSPCIG00000010659) #36 GTF3C3 (ENSPCIG00000010674) ENSPCIG00000010684 Common wonbat MODERN SPECIES 1018 ENSVURG00010015914 ENSVURG00010015949 ENSVURG00010016231 ENSVURG00010016251 ENSVURG00010016261 ENSVURG00010016266 ENSVURG00010016286 ENSVURG00010016392 ENSVURG00010016490 KCTD18 (ENSVURG00010016512) #15 SPATS2L (ENSVURG00010016539) #16 MAIP1 (ENSVURG00010016655) #18 TYW5 (ENSVURG00010016662) #19 C2orf69 (ENSVURG00010016673) #20 ENSVURG00010016695 SATB2 (ENSVURG00010016725) #22 ENSVURG00010016787 ENSVURG00010016799 ENSVURG00010016811 PLCL1 (ENSVURG00010016821) #24 BOLL (ENSVURG00010016845) #25 MARS2 (ENSVURG00010016927) #26 RFTN2 (ENSVURG00010016931) #27 MOB4 (ENSVURG00010016938) #28 ENSVURG00010016957 #29 HSPD1 (ENSVURG00010016966) ##30 COQ10B (ENSVURG00010016979) #31 SF3B1 (ENSVURG00010016994) #32 ANKRD44 (ENSVURG00010017027) #33 PGAP1 (ENSVURG00010017062) #36 C2orf66 (ENSVURG00010017088) Wallaby MODERN SPECIES 2771 ENSMEUG00000005161 #22 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000028897 ENSSHAG00000001437 ENSSHAG00000017209 ENSSHAG00000017107 ENSSHAG00000017063 ENSSHAG00000016877 #11 ENSSHAG00000016703 #11 ENSSHAG00000016525 #12 ENSSHAG00000024050 #13 KCTD18 (ENSSHAG00000016332) #15 SPATS2L (ENSSHAG00000016122) #16 MAIP1 (ENSSHAG00000014443) #18 TYW5 (ENSSHAG00000014351) #19 C2orf69 (ENSSHAG00000014333) #20 FTCDNL1 (ENSSHAG00000013838) SATB2 (ENSSHAG00000011077) #22 PLCL1 (ENSSHAG00000018454) #24 BOLL (ENSSHAG00000018057) #25 RFTN2 (ENSSHAG00000017876) #27 MARS2 (ENSSHAG00000017980) #26 MOB4 (ENSSHAG00000017821) #28 HSPE1 (ENSSHAG00000017770) #29 HSPD1 (ENSSHAG00000017750) ##30 COQ10B (ENSSHAG00000017719) #31 SF3B1 (ENSSHAG00000017564) #32 ANKRD44 (ENSSHAG00000016824) #33 PGAP1 (ENSSHAG00000016631) #36 C2orf66 (ENSSHAG00000029653) GTF3C3 (ENSSHAG00000016483) CCDC150 (ENSSHAG00000016389) HECW2 (ENSSHAG00000015049) Opossum MODERN SPECIES 3 ENSMODG00000045687 ENSMODG00000037855 ENSMODG00000048837 ENSMODG00000024581 ENSMODG00000051203 AOX4 (ENSMODG00000028424) #11 ENSMODG00000041712 #11 AOX1 (ENSMODG00000012485) #12 ENSMODG00000012421 #13 KCTD18 (ENSMODG00000012419) #15 SPATS2L (ENSMODG00000012413) #16 MAIP1 (ENSMODG00000012389) #18 TYW5 (ENSMODG00000012381) #19 C2orf69 (ENSMODG00000012380) #20 ENSMODG00000024601 SATB2 (ENSMODG00000012352) #22 PLCL1 (ENSMODG00000012331) #24 BOLL (ENSMODG00000012323) #25 MARS2 (ENSMODG00000024604) #26 RFTN2 (ENSMODG00000012311) #27 MOB4 (ENSMODG00000012305) #28 HSPE1 (ENSMODG00000012295) ##29 ENSMODG00000012289 ##30 COQ10B (ENSMODG00000012281) #31 SF3B1 (ENSMODG00000012275) #32 ENSMODG00000012241 ANKRD44 (ENSMODG00000012238) #33 PGAP1 (ENSMODG00000012214) #36 C2orf66 (ENSMODG00000028631) GTF3C3 (ENSMODG00000012196) CCDC150 (ENSMODG00000012183) Platypus MODERN SPECIES 18 ENSOANG00000003495 ENSOANG00000045194 NDUFB3 (ENSOANG00000036170) HYCC2 (ENSOANG00000044954) ORC2 (ENSOANG00000010096) NIF3L1 (ENSOANG00000010095) ENSOANG00000008065 CLK1 (ENSOANG00000012539) #8 BZW1 (ENSOANG00000010824) #9 ENSOANG00000049296 #11 ENSOANG00000044935 #13 ENSOANG00000045688 #16 ENSOANG00000036911 #18 TYW5 (ENSOANG00000040342) #19 ENSOANG00000002096 #20 SATB2 (ENSOANG00000039784) #22 PLCL1 (ENSOANG00000044001) #24 BOLL (ENSOANG00000019928) #25 RFTN2 (ENSOANG00000020014) #27 MOB4 (ENSOANG00000044127) #28 ENSOANG00000008195 ENSOANG00000010415 ##29 HSPD1 (ENSOANG00000010414) ##30 COQ10B (ENSOANG00000043506) #31 SF3B1 (ENSOANG00000045106) #32 ANKRD44 (ENSOANG00000040430) #33 PGAP1 (ENSOANG00000038233) #36 GTF3C3 (ENSOANG00000043590) ENSOANG00000050849 HECW2 (ENSOANG00000042120) STK17B (ENSOANG00000047876) ##17 Sauria ANCESTRAL SPECIES 32 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Archelosauria ANCESTRAL SPECIES 8 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Cryptodira ANCESTRAL SPECIES 5 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 Testudinoidea ANCESTRAL SPECIES 11 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a.r #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 Emydidae ANCESTRAL SPECIES 4 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a.q #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 Three-toed box turtle MODERN SPECIES 25 NDUFB3 (ENSTMTG00000009826) HYCC2 (ENSTMTG00000009797) ORC2 (ENSTMTG00000009760) NIF3L1 (ENSTMTG00000009742) PPIL3 (ENSTMTG00000009721) #7 CLK1 (ENSTMTG00000009691) #8 BZW1 (ENSTMTG00000009663) #9 ENSTMTG00000009541 #12 ENSTMTG00000009481 #12 KCTD18 (ENSTMTG00000009452) #15 SPATS2L (ENSTMTG00000009400) #16 MAIP1 (ENSTMTG00000009374) #18 TYW5 (ENSTMTG00000009344) #19 C2orf69 (ENSTMTG00000009340) #20 FTCDNL1 (ENSTMTG00000009322) SATB2 (ENSTMTG00000009198) #22 PLCL1 (ENSTMTG00000009159) #24 ENSTMTG00000009149 BOLL (ENSTMTG00000009098) #25 RFTN2 (ENSTMTG00000009012) #27 MOB4 (ENSTMTG00000008969) #28 HSPE1 (ENSTMTG00000008952) ##29 HSPD1 (ENSTMTG00000008938) ##30 COQ10B (ENSTMTG00000008923) #31 SF3B1 (ENSTMTG00000008886) #32 ANKRD44 (ENSTMTG00000006527) #33 PGAP1 (ENSTMTG00000006286) #36 GTF3C3 (ENSTMTG00000006246) CCDC150 (ENSTMTG00000006052) HECW2 (ENSTMTG00000005911) STK17B (ENSTMTG00000005873) ##17 painted turtle MODERN SPECIES 2 NDUFB3 (ENSCPBG00000011726) HYCC2 (ENSCPBG00000011729) ORC2 (ENSCPBG00000011736) NIF3L1 (ENSCPBG00000011743) PPIL3 (ENSCPBG00000011745) #7 CLK1 (ENSCPBG00000011747) #8 BZW1 (ENSCPBG00000011755) #9 ENSCPBG00000011762 #12 ENSCPBG00000011787 #12 KCTD18 (ENSCPBG00000011796) #15 SPATS2L (ENSCPBG00000011805) #16 MAIP1 (ENSCPBG00000011829) #18 TYW5 (ENSCPBG00000011833) #19 C2orf69 (ENSCPBG00000011840) #20 FTCDNL1 (ENSCPBG00000011843) ENSCPBG00000011848 #22 Testudinidae ANCESTRAL SPECIES 8 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00530000064234.o #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00960000192086 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a.r #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 Goode s thornscrub tortoise MODERN SPECIES 2 HYCC2 (ENSGEVG00005013408) ORC2 (ENSGEVG00005013508) NIF3L1 (ENSGEVG00005013708) PPIL3 (ENSGEVG00005013737) #7 CLK1 (ENSGEVG00005013766) #8 BZW1 (ENSGEVG00005013813) #9 ENSGEVG00005013897 #12 ENSGEVG00005014463 #12 KCTD18 (ENSGEVG00005014582) #15 SPATS2L (ENSGEVG00005014623) #16 MAIP1 (ENSGEVG00005014681) #18 TYW5 (ENSGEVG00005014741) #19 C2orf69 (ENSGEVG00005014762) #20 ENSGEVG00005014793 FTCDNL1 (ENSGEVG00005014851) SATB2 (ENSGEVG00005014931) #22 PLCL1 (ENSGEVG00005015176) #24 ENSGEVG00005015268 BOLL (ENSGEVG00005015320) #25 RFTN2 (ENSGEVG00005015347) #27 MOB4 (ENSGEVG00005015382) #28 ENSGEVG00005015406 ##29 HSPD1 (ENSGEVG00005015419) ##30 COQ10B (ENSGEVG00005015431) #31 SF3B1 (ENSGEVG00005015452) #32 ANKRD44 (ENSGEVG00005015491) #33 PGAP1 (ENSGEVG00005009499) #36 GTF3C3 (ENSGEVG00005010993) CCDC150 (ENSGEVG00005011659) HECW2 (ENSGEVG00005011769) STK17B (ENSGEVG00005012035) ##17 Abingdon island giant tortoise MODERN SPECIES 1768 MAIP1 (ENSCABG00000002848) #18 TYW5 (ENSCABG00000002845) #19 C2orf69 (ENSCABG00000002844) #20 ENSCABG00000002842 FTCDNL1 (ENSCABG00000002840) SATB2 (ENSCABG00000002838) #22 PLCL1 (ENSCABG00000002834) #24 Chinese turtle MODERN SPECIES 677 HYCC2 (ENSPSIG00000004753) ORC2 (ENSPSIG00000004159) NIF3L1 (ENSPSIG00000004085) PPIL3 (ENSPSIG00000003967) #7 CLK1 (ENSPSIG00000003762) #8 BZW1 (ENSPSIG00000003613) #9 ENSPSIG00000003574 #12 ENSPSIG00000003565 #12 ENSPSIG00000003550 ENSPSIG00000018142 #12 ENSPSIG00000018140 #13 KCTD18 (ENSPSIG00000018125) #15 ENSPSIG00000018117 #16 TYW5 (ENSPSIG00000018111) #19 C2orf69 (ENSPSIG00000001193) #20 SATB2 (ENSPSIG00000018044) #22 PLCL1 (ENSPSIG00000018022) #24 BOLL (ENSPSIG00000018004) #25 RFTN2 (ENSPSIG00000017989) #27 MOB4 (ENSPSIG00000017978) #28 HSPE1 (ENSPSIG00000017974) ##29 HSPD1 (ENSPSIG00000017889) ##30 COQ10B (ENSPSIG00000017692) #31 SF3B1 (ENSPSIG00000017222) #32 ANKRD44 (ENSPSIG00000015936) #33 C2orf66 (ENSPSIG00000015930) GTF3C3 (ENSPSIG00000015691) CCDC150 (ENSPSIG00000015196) HECW2 (ENSPSIG00000013756) STK17B (ENSPSIG00000013683) ##17 ENSPSIG00000013666 Archosauria ANCESTRAL SPECIES 6 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b.j.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 Aves ANCESTRAL SPECIES 8 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b.j.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 Neognathae ANCESTRAL SPECIES 6 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b.j.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 Neognathae_b ANCESTRAL SPECIES 7 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b.j.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 Passeriformes ANCESTRAL SPECIES 6 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000163579 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b.j.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 ENSGT00940000161744 Great tit MODERN SPECIES 27 ENSPMJG00000018178 CASP10 (ENSPMJG00000018177) CFLAR (ENSPMJG00000018176) NDUFB3 (ENSPMJG00000018175) HYCC2 (ENSPMJG00000018174) ORC2 (ENSPMJG00000018173) NIF3L1 (ENSPMJG00000018172) ENSPMJG00000018171 BZW1 (ENSPMJG00000018170) #9 AOX1 (ENSPMJG00000004145) #12 ENSPMJG00000004063 SPATS2L (ENSPMJG00000004053) #16 MAIP1 (ENSPMJG00000004020) #18 TYW5 (ENSPMJG00000004013) #19 C2orf69 (ENSPMJG00000004011) #20 SATB2 (ENSPMJG00000004001) #22 PLCL1 (ENSPMJG00000003985) #24 BOLL (ENSPMJG00000003966) #25 RFTN2 (ENSPMJG00000003955) #27 MOB4 (ENSPMJG00000003952) #28 HSPE1 (ENSPMJG00000003948) ##29 HSPD1 (ENSPMJG00000003936) ##30 COQ10B (ENSPMJG00000003934) #31 SF3B1 (ENSPMJG00000003918) #32 ANKRD44 (ENSPMJG00000003248) #33 PGAP1 (ENSPMJG00000003000) #36 GTF3C3 (ENSPMJG00000000637) HECW2 (ENSPMJG00000000591) STK17B (ENSPMJG00000000570) ##17 ENSPMJG00000000562 SLC39A10 (ENSPMJG00000000557) Passeriformes_d ANCESTRAL SPECIES 8 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b.j.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D.c #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 ENSGT00940000161744 Flycatcher MODERN SPECIES 26 CFLAR (ENSFALG00000004136) NDUFB3 (ENSFALG00000004140) HYCC2 (ENSFALG00000004144) ENSFALG00000028144 NIF3L1 (ENSFALG00000024500) PPIL3 (ENSFALG00000023399) #7 BZW1 (ENSFALG00000027684) #9 AOX1 (ENSFALG00000004179) #12 ENSFALG00000025029 #13 KCTD18 (ENSFALG00000004224) #15 SPATS2L (ENSFALG00000004226) #16 MAIP1 (ENSFALG00000026216) #18 TYW5 (ENSFALG00000026401) #19 C2orf69 (ENSFALG00000028312) #20 ENSFALG00000025773 SATB2 (ENSFALG00000004242) #22 PLCL1 (ENSFALG00000004251) #24 BOLL (ENSFALG00000004255) #25 RFTN2 (ENSFALG00000004261) #27 MOB4 (ENSFALG00000004266) #28 HSPE1 (ENSFALG00000025157) ##29 HSPD1 (ENSFALG00000004272) ##30 COQ10B (ENSFALG00000004277) #31 SF3B1 (ENSFALG00000004281) #32 ENSFALG00000004286 #33 PGAP1 (ENSFALG00000004291) #36 C2orf66 (ENSFALG00000004295) GTF3C3 (ENSFALG00000004303) HECW2 (ENSFALG00000004319) STK17B (ENSFALG00000004323) ##17 ENSFALG00000004327 Passeriformes_g ANCESTRAL SPECIES 9 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b.j.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D.c #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 ENSGT00940000161744 Passeroidea ANCESTRAL SPECIES 8 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b.j.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D.c #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 ENSGT00940000161744 Zebra finch MODERN SPECIES 29 CASP10 (ENSTGUG00000010306) CFLAR (ENSTGUG00000010309) NDUFB3 (ENSTGUG00000027597) HYCC2 (ENSTGUG00000023035) BZW1 (ENSTGUG00000010398) #9 ORC2 (ENSTGUG00000010352) NIF3L1 (ENSTGUG00000010385) PPIL3 (ENSTGUG00000010395) #7 AOX1 (ENSTGUG00000010409) #12 ENSTGUG00000010459 #13 ENSTGUG00000024909 #15 SPATS2L (ENSTGUG00000010462) #16 MAIP1 (ENSTGUG00000010466) #18 TYW5 (ENSTGUG00000010474) #19 C2orf69 (ENSTGUG00000028654) #20 SATB2 (ENSTGUG00000010480) #22 PLCL1 (ENSTGUG00000010492) #24 BOLL (ENSTGUG00000010496) #25 RFTN2 (ENSTGUG00000010512) #27 MOB4 (ENSTGUG00000027293) #28 HSPE1 (ENSTGUG00000020798) ##29 HSPD1 (ENSTGUG00000010538) ##30 COQ10B (ENSTGUG00000010549) #31 SF3B1 (ENSTGUG00000010553) #32 ANKRD44 (ENSTGUG00000010567) #33 PGAP1 (ENSTGUG00000010613) #36 C2orf66 (ENSTGUG00000010629) GTF3C3 (ENSTGUG00000010631) HECW2 (ENSTGUG00000010653) STK17B (ENSTGUG00000010679) ##17 SLC39A10 (ENSTGUG00000010699) Common canary MODERN SPECIES 8 ENSSCAG00000002679 CASP10 (ENSSCAG00000002684) CFLAR (ENSSCAG00000002692) NDUFB3 (ENSSCAG00000002696) HYCC2 (ENSSCAG00000002703) ORC2 (ENSSCAG00000002715) NIF3L1 (ENSSCAG00000002725) PPIL3 (ENSSCAG00000002731) #7 BZW1 (ENSSCAG00000002739) #9 AOX1 (ENSSCAG00000002748) #12 ENSSCAG00000002760 #13 SPATS2L (ENSSCAG00000002770) #16 MAIP1 (ENSSCAG00000002783) #18 TYW5 (ENSSCAG00000002800) #19 C2orf69 (ENSSCAG00000002803) #20 SATB2 (ENSSCAG00000002810) #22 PLCL1 (ENSSCAG00000002820) #24 BOLL (ENSSCAG00000002826) #25 RFTN2 (ENSSCAG00000002834) #27 MOB4 (ENSSCAG00000002843) #28 HSPE1 (ENSSCAG00000002849) ##29 HSPD1 (ENSSCAG00000002857) ##30 COQ10B (ENSSCAG00000002862) #31 SF3B1 (ENSSCAG00000002869) #32 ANKRD44 (ENSSCAG00000002900) #33 PGAP1 (ENSSCAG00000002970) #36 GTF3C3 (ENSSCAG00000003067) HECW2 (ENSSCAG00000003082) STK17B (ENSSCAG00000003100) ##17 ENSSCAG00000003138 SLC39A10 (ENSSCAG00000003118) Medium ground finch MODERN SPECIES 1 CASP8 (ENSGFOG00000000120) ENSGFOG00000000126 CASP10 (ENSGFOG00000000131) CFLAR (ENSGFOG00000000133) NDUFB3 (ENSGFOG00000000135) HYCC2 (ENSGFOG00000000137) ORC2 (ENSGFOG00000000142) NIF3L1 (ENSGFOG00000000152) PPIL3 (ENSGFOG00000000157) #7 BZW1 (ENSGFOG00000000164) #9 AOX1 (ENSGFOG00000000189) #12 SPATS2L (ENSGFOG00000000276) #16 MAIP1 (ENSGFOG00000000285) #18 TYW5 (ENSGFOG00000000292) #19 C2orf69 (ENSGFOG00000000297) #20 SATB2 (ENSGFOG00000000304) #22 PLCL1 (ENSGFOG00000000319) #24 BOLL (ENSGFOG00000000330) #25 RFTN2 (ENSGFOG00000000339) #27 MOB4 (ENSGFOG00000000351) #28 HSPE1 (ENSGFOG00000000358) ##29 HSPD1 (ENSGFOG00000000363) ##30 COQ10B (ENSGFOG00000000371) #31 SF3B1 (ENSGFOG00000000377) #32 ANKRD44 (ENSGFOG00000000465) #33 PGAP1 (ENSGFOG00000001016) #36 C2orf66 (ENSGFOG00000001182) GTF3C3 (ENSGFOG00000001187) HECW2 (ENSGFOG00000001246) STK17B (ENSGFOG00000001718) ##17 ENSGFOG00000001726 Neognathae_c ANCESTRAL SPECIES 9 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 ENSGT00940000155282 Kakapo MODERN SPECIES 22 CASP10 (ENSSHBG00005021045) NDUFB3 (ENSSHBG00005021043) HYCC2 (ENSSHBG00005021042) ORC2 (ENSSHBG00005021041) NIF3L1 (ENSSHBG00005021038) PPIL3 (ENSSHBG00005021034) #7 CLK1 (ENSSHBG00005021033) #8 BZW1 (ENSSHBG00005021029) #9 ENSSHBG00005020922 #12 ENSSHBG00005019636 #12 KCTD18 (ENSSHBG00005019425) #15 SPATS2L (ENSSHBG00005019422) #16 MAIP1 (ENSSHBG00005019417) #18 TYW5 (ENSSHBG00005019414) #19 C2orf69 (ENSSHBG00005019413) #20 SATB2 (ENSSHBG00005019410) #22 PLCL1 (ENSSHBG00005019405) #24 BOLL (ENSSHBG00005019392) #25 RFTN2 (ENSSHBG00005019386) #27 MOB4 (ENSSHBG00005019383) #28 HSPE1 (ENSSHBG00005019379) ##29 HSPD1 (ENSSHBG00005019373) ##30 COQ10B (ENSSHBG00005019365) #31 SF3B1 (ENSSHBG00005019352) #32 ANKRD44 (ENSSHBG00005018394) #33 PGAP1 (ENSSHBG00005018304) #36 GTF3C3 (ENSSHBG00005018293) ENSSHBG00005018286 ENSSHBG00005018282 HECW2 (ENSSHBG00005018269) STK17B (ENSSHBG00005018259) ##17 Golden eagle MODERN SPECIES 22 CFLAR (ENSACCG00020002739) NDUFB3 (ENSACCG00020002722) HYCC2 (ENSACCG00020002702) ORC2 (ENSACCG00020002685) NIF3L1 (ENSACCG00020002663) ENSACCG00020002651 CLK1 (ENSACCG00020002621) #8 BZW1 (ENSACCG00020002605) #9 ENSACCG00020002563 #12 ENSACCG00020002495 #12 KCTD18 (ENSACCG00020002434) #15 SPATS2L (ENSACCG00020002416) #16 MAIP1 (ENSACCG00020002401) #18 TYW5 (ENSACCG00020002393) #19 C2orf69 (ENSACCG00020002380) #20 SATB2 (ENSACCG00020002371) #22 PLCL1 (ENSACCG00020002350) #24 BOLL (ENSACCG00020002330) #25 RFTN2 (ENSACCG00020002295) #27 MOB4 (ENSACCG00020002267) #28 HSPE1 (ENSACCG00020002252) ##29 HSPD1 (ENSACCG00020002238) ##30 COQ10B (ENSACCG00020002215) #31 SF3B1 (ENSACCG00020002196) #32 ANKRD44 (ENSACCG00020002129) #33 PGAP1 (ENSACCG00020002045) #36 GTF3C3 (ENSACCG00020001980) ENSACCG00020001942 HECW2 (ENSACCG00020001818) STK17B (ENSACCG00020001688) ##17 ENSACCG00020001679 Galloanserae ANCESTRAL SPECIES 7 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b.j.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 ENSGT00940000161744 Anatidae ANCESTRAL SPECIES 10 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT01090000261922 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 ENSGT00940000155282 Pink-footed goose MODERN SPECIES 18 ENSABRG00000008007 MAIP1 (ENSABRG00000008014) #18 TYW5 (ENSABRG00000008024) #19 C2orf69 (ENSABRG00000008031) #20 SATB2 (ENSABRG00000008058) #22 PLCL1 (ENSABRG00000008112) #24 BOLL (ENSABRG00000008146) #25 RFTN2 (ENSABRG00000008189) #27 MOB4 (ENSABRG00000008210) #28 ENSABRG00000008219 HSPE1 (ENSABRG00000008221) ##29 HSPD1 (ENSABRG00000008240) ##30 COQ10B (ENSABRG00000008578) #31 SF3B1 (ENSABRG00000008654) #32 ANKRD44 (ENSABRG00000009757) #33 PGAP1 (ENSABRG00000012531) #36 GTF3C3 (ENSABRG00000012719) HECW2 (ENSABRG00000012968) STK17B (ENSABRG00000013421) ##17 DNAH7 (ENSABRG00000013699) Duck MODERN SPECIES 25 CASP8 (ENSAPLG00000014872) ENSAPLG00000015210 CASP10 (ENSAPLG00000015244) CFLAR (ENSAPLG00000015311) NDUFB3 (ENSAPLG00000015508) HYCC2 (ENSAPLG00000015610) NIF3L1 (ENSAPLG00000015875) PPIL3 (ENSAPLG00000015961) #7 CLK1 (ENSAPLG00000016010) #8 BZW1 (ENSAPLG00000016194) #9 AOX1 (ENSAPLG00000008708) #12 SPATS2L (ENSAPLG00000008552) #16 MAIP1 (ENSAPLG00000008514) #18 TYW5 (ENSAPLG00000008413) #19 C2orf69 (ENSAPLG00000000922) #20 SATB2 (ENSAPLG00000008131) #22 PLCL1 (ENSAPLG00000006530) #24 BOLL (ENSAPLG00000006193) #25 RFTN2 (ENSAPLG00000005755) #27 MOB4 (ENSAPLG00000019077) #28 SF3B1 (ENSAPLG00000003993) #32 ANKRD44 (ENSAPLG00000002803) #33 PGAP1 (ENSAPLG00000001884) #36 GTF3C3 (ENSAPLG00000016020) ENSAPLG00000015999 HECW2 (ENSAPLG00000015383) STK17B (ENSAPLG00000015076) ##17 ENSAPLG00000022933 ENSAPLG00000026608 ENSAPLG00000015074 ENSAPLG00000013720 Phasianidae ANCESTRAL SPECIES 8 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b.j.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 ENSGT00940000161744 Phasianidae_b ANCESTRAL SPECIES 8 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b.j.a #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000009468 ENSGT00390000016929 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 ENSGT00940000161744 Chicken MODERN SPECIES 36 NDUFB3 (ENSGALG00010024869) HYCC2 (ENSGALG00010024845) ORC2 (ENSGALG00010024830) NIF3L1 (ENSGALG00010024811) PPIL3 (ENSGALG00010024807) #7 CLK1 (ENSGALG00010024803) #8 BZW1 (ENSGALG00010024792) #9 AOX2 (ENSGALG00010024771) #12 AOX1 (ENSGALG00010024731) #12 ENSGALG00010024213 #13 KCTD18 (ENSGALG00010024207) #15 SPATS2L (ENSGALG00010024075) #16 MAIP1 (ENSGALG00010024020) #18 TYW5 (ENSGALG00010023968) #19 C2orf69 (ENSGALG00010023884) #20 SATB2 (ENSGALG00010023831) #22 PLCL1 (ENSGALG00010015218) #24 BOLL (ENSGALG00010015152) #25 RFTN2 (ENSGALG00010015133) #27 MOB4 (ENSGALG00010015100) #28 HSPE1 (ENSGALG00010015092) ##29 HSPD1 (ENSGALG00010015069) ##30 COQ10B (ENSGALG00010015043) #31 SF3B1 (ENSGALG00010010748) #32 ANKRD44 (ENSGALG00010010988) #33 PGAP1 (ENSGALG00010010973) #36 C7H2ORF66 (ENSGALG00010010961) GTF3C3 (ENSGALG00010010955) HECW2 (ENSGALG00010010928) STK17B (ENSGALG00010010908) ##17 ENSGALG00010010895 Turkey MODERN SPECIES 27 HYCC2 (ENSMGAG00000007746) ORC2 (ENSMGAG00000007673) NIF3L1 (ENSMGAG00000007653) PPIL3 (ENSMGAG00000007648) #7 CLK1 (ENSMGAG00000007598) #8 BZW1 (ENSMGAG00000007562) #9 ENSMGAG00000020945 #12 AOX1 (ENSMGAG00000007252) #12 ENSMGAG00000007247 #13 ENSMGAG00000007215 #15 ENSMGAG00000021622 #15 SPATS2L (ENSMGAG00000007229) #16 MAIP1 (ENSMGAG00000007211) #18 TYW5 (ENSMGAG00000007194) #19 C2orf69 (ENSMGAG00000007191) #20 SATB2 (ENSMGAG00000007173) #22 ENSMGAG00000007167 #24 BOLL (ENSMGAG00000020859) #25 RFTN2 (ENSMGAG00000007142) #27 MOB4 (ENSMGAG00000007119) #28 HSPE1 (ENSMGAG00000007107) ##29 HSPD1 (ENSMGAG00000007073) ##30 COQ10B (ENSMGAG00000007063) #31 SF3B1 (ENSMGAG00000007017) #32 ANKRD44 (ENSMGAG00000006933) #33 PGAP1 (ENSMGAG00000006871) #36 C2orf66 (ENSMGAG00000006869) GTF3C3 (ENSMGAG00000006840) HECW2 (ENSMGAG00000006790) STK17B (ENSMGAG00000016466) ##17 ENSMGAG00000006729 Japanese quail MODERN SPECIES 25 ENSCJPG00005015243 CFLAR (ENSCJPG00005015242) NDUFB3 (ENSCJPG00005015241) HYCC2 (ENSCJPG00005015237) ORC2 (ENSCJPG00005015236) PPIL3 (ENSCJPG00005015235) #7 NIF3L1 (ENSCJPG00005015111) CLK1 (ENSCJPG00005015110) #8 BZW1 (ENSCJPG00005015109) #9 AOX1 (ENSCJPG00005014163) #12 KCTD18 (ENSCJPG00005014162) #15 SPATS2L (ENSCJPG00005014161) #16 ENSCJPG00005014159 #18 TYW5 (ENSCJPG00005014158) #19 C2orf69 (ENSCJPG00005014157) #20 SATB2 (ENSCJPG00005014156) #22 PLCL1 (ENSCJPG00005014151) #24 BOLL (ENSCJPG00005014150) #25 RFTN2 (ENSCJPG00005014149) #27 MOB4 (ENSCJPG00005014148) #28 ENSCJPG00005014146 COL6A3 (ENSCJPG00005014145) MLPH (ENSCJPG00005014101) PRLH (ENSCJPG00005014089) RAB17 (ENSCJPG00005014087) LRRFIP1 (ENSCJPG00005014059) RAMP1 (ENSCJPG00005014050) UBE2F (ENSCJPG00005014047) ENSCJPG00005014041 ENSCJPG00005014038 MREG (ENSCJPG00005014036) African ostrich MODERN SPECIES 190 TYW5 (ENSSCUG00000001155) #19 C2orf69 (ENSSCUG00000001156) #20 SATB2 (ENSSCUG00000001157) #22 PLCL1 (ENSSCUG00000001166) #24 BOLL (ENSSCUG00000001167) #25 RFTN2 (ENSSCUG00000001170) #27 MOB4 (ENSSCUG00000001173) #28 HSPE1 (ENSSCUG00000001176) ##29 HSPD1 (ENSSCUG00000001178) ##30 COQ10B (ENSSCUG00000001180) #31 SF3B1 (ENSSCUG00000001181) #32 ANKRD44 (ENSSCUG00000001187) #33 PGAP1 (ENSSCUG00000001197) #36 C2orf66 (ENSSCUG00000001199) GTF3C3 (ENSSCUG00000001201) CCDC150 (ENSSCUG00000001205) HECW2 (ENSSCUG00000001213) STK17B (ENSSCUG00000001218) ##17 Australian saltwater crocodile MODERN SPECIES 66 ORC2 (ENSCPRG00005008409) NIF3L1 (ENSCPRG00005008503) PPIL3 (ENSCPRG00005008579) #7 CLK1 (ENSCPRG00005008601) #8 BZW1 (ENSCPRG00005008656) #9 ENSCPRG00005008919 #12 ENSCPRG00005009153 #12 ENSCPRG00005009165 #12 ENSCPRG00005009184 #12 ENSCPRG00005009193 #12 KCTD18 (ENSCPRG00005009197) #15 SPATS2L (ENSCPRG00005009201) #16 TYW5 (ENSCPRG00005009213) #19 C2orf69 (ENSCPRG00005009215) #20 FTCDNL1 (ENSCPRG00005009218) SATB2 (ENSCPRG00005009227) #22 ENSCPRG00005009240 PLCL1 (ENSCPRG00005009250) #24 BOLL (ENSCPRG00005009258) #25 RFTN2 (ENSCPRG00005009261) #27 MOB4 (ENSCPRG00005009263) #28 ENSCPRG00005009267 ##29 HSPD1 (ENSCPRG00005009268) ##30 COQ10B (ENSCPRG00005009291) #31 SF3B1 (ENSCPRG00005009298) #32 ANKRD44 (ENSCPRG00005009315) #33 PGAP1 (ENSCPRG00005009330) #36 GTF3C3 (ENSCPRG00005009426) CCDC150 (ENSCPRG00005009675) HECW2 (ENSCPRG00005009692) STK17B (ENSCPRG00005009733) ##17 Lepidosauria ANCESTRAL SPECIES 7 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b #13 ENSGT00390000004840 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 Episquamata ANCESTRAL SPECIES ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b #13 ENSGT00390000004840 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 Laterata ANCESTRAL SPECIES 42 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 Common wall lizard MODERN SPECIES ORC2 (ENSPMRG00000002871) NIF3L1 (ENSPMRG00000002889) PPIL3 (ENSPMRG00000002900) #7 CLK1 (ENSPMRG00000002909) #8 BZW1 (ENSPMRG00000002917) #9 ENSPMRG00000003375 #12 ENSPMRG00000005111 ENSPMRG00000005124 #12 KCTD18 (ENSPMRG00000005144) #15 SPATS2L (ENSPMRG00000005149) #16 ENSPMRG00000005158 MAIP1 (ENSPMRG00000005161) #18 TYW5 (ENSPMRG00000005165) #19 C2orf69 (ENSPMRG00000005171) #20 FTCDNL1 (ENSPMRG00000005176) SATB2 (ENSPMRG00000005180) #22 ENSPMRG00000005184 PLCL1 (ENSPMRG00000005188) #24 BOLL (ENSPMRG00000005191) #25 RFTN2 (ENSPMRG00000005194) #27 MOB4 (ENSPMRG00000005201) #28 ENSPMRG00000005210 ##29 ENSPMRG00000005220 ##30 COQ10B (ENSPMRG00000005252) #31 SF3B1 (ENSPMRG00000005261) #32 ANKRD44 (ENSPMRG00000005384) #33 PGAP1 (ENSPMRG00000006002) #36 GTF3C3 (ENSPMRG00000006178) ENSPMRG00000006458 MPP4 (ENSPMRG00000006532) ALS2 (ENSPMRG00000006747) Argentine black and white tegu MODERN SPECIES 12 ORC2 (ENSSMRG00000020017) NIF3L1 (ENSSMRG00000020018) PPIL3 (ENSSMRG00000020020) #7 MKS1 (ENSSMRG00000020026) ENSSMRG00000020027 CLK1 (ENSSMRG00000020029) #8 BZW1 (ENSSMRG00000020030) #9 ENSSMRG00000020046 #12 ENSSMRG00000020241 #12 KCTD18 (ENSSMRG00000020242) #15 SPATS2L (ENSSMRG00000020243) #16 MAIP1 (ENSSMRG00000020245) #18 TYW5 (ENSSMRG00000020247) #19 C2orf69 (ENSSMRG00000020249) #20 FTCDNL1 (ENSSMRG00000020252) SATB2 (ENSSMRG00000020256) #22 ENSSMRG00000020259 PLCL1 (ENSSMRG00000020260) #24 ENSSMRG00000020262 ENSSMRG00000020263 #25 RFTN2 (ENSSMRG00000020265) #27 MOB4 (ENSSMRG00000020267) #28 HSPE1 (ENSSMRG00000020269) ##29 HSPD1 (ENSSMRG00000020273) ##30 COQ10B (ENSSMRG00000020275) #31 SF3B1 (ENSSMRG00000020276) #32 ANKRD44 (ENSSMRG00000020279) #33 PGAP1 (ENSSMRG00000020281) #36 CFLAR (ENSSMRG00000020283) ENSSMRG00000020284 TRAK2 (ENSSMRG00000020286) Toxicofera ANCESTRAL SPECIES ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000163579 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00950000183114.a.b.b.c.a #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 Lizard MODERN SPECIES 957 CREB1 (ENSACAG00000009672) METTL21A (ENSACAG00000009731) ENSACAG00000009752 ENSACAG00000040464 ENSACAG00000009794 PLEKHM3 (ENSACAG00000009797) ENSACAG00000000254 C2orf69 (ENSACAG00000011226) #20 ENSACAG00000034897 ENSACAG00000029096 SATB2 (ENSACAG00000009821) #22 Elapidae ANCESTRAL SPECIES ENSGT00530000064199.k ENSGT00530000064199.l ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000163579 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 ENSGT00940000154014.b.b ##17 Indian cobra DUPLICATION Indian cobra MODERN SPECIES CFLAR (ENSNNAG00000009607) NDUFB3 (ENSNNAG00000009702) HYCC2 (ENSNNAG00000009742) ORC2 (ENSNNAG00000009852) NIF3L1 (ENSNNAG00000009910) ENSNNAG00000009941 CLK1 (ENSNNAG00000009956) #8 BZW1 (ENSNNAG00000010016) #9 AOX1 (ENSNNAG00000010279) #12 KCTD18 (ENSNNAG00000014023) #15 SPATS2L (ENSNNAG00000014040) #16 MAIP1 (ENSNNAG00000014058) #18 TYW5 (ENSNNAG00000014077) #19 C2orf69 (ENSNNAG00000006692) #20 ENSNNAG00000006700 #22 ENSNNAG00000006717 #22 PLCL1 (ENSNNAG00000006743) #24 BOLL (ENSNNAG00000006909) #25 RFTN2 (ENSNNAG00000006926) #27 MOB4 (ENSNNAG00000006969) #28 HSPE1 (ENSNNAG00000006995) ##29 HSPD1 (ENSNNAG00000007012) ##30 COQ10B (ENSNNAG00000007040) #31 SF3B1 (ENSNNAG00000007064) #32 ANKRD44 (ENSNNAG00000007131) #33 PGAP1 (ENSNNAG00000007275) #36 GTF3C3 (ENSNNAG00000007525) CCDC150 (ENSNNAG00000007636) HECW2 (ENSNNAG00000007893) STK17B (ENSNNAG00000008143) ##17 ENSNNAG00000008194 Indian cobra MODERN SPECIES CASP10 (ENSNNAG00000009584) CFLAR (ENSNNAG00000009607) NDUFB3 (ENSNNAG00000009702) HYCC2 (ENSNNAG00000009742) ORC2 (ENSNNAG00000009852) NIF3L1 (ENSNNAG00000009910) ENSNNAG00000009941 CLK1 (ENSNNAG00000009956) #8 BZW1 (ENSNNAG00000010016) #9 AOX1 (ENSNNAG00000010279) #12 KCTD18 (ENSNNAG00000014023) #15 SPATS2L (ENSNNAG00000014040) #16 MAIP1 (ENSNNAG00000014058) #18 TYW5 (ENSNNAG00000014077) #19 C2orf69 (ENSNNAG00000006692) #20 ENSNNAG00000006700 #22 ENSNNAG00000006717 #22 PLCL1 (ENSNNAG00000006743) #24 BOLL (ENSNNAG00000006909) #25 RFTN2 (ENSNNAG00000006926) #27 MOB4 (ENSNNAG00000006969) #28 HSPE1 (ENSNNAG00000006995) ##29 HSPD1 (ENSNNAG00000007012) ##30 COQ10B (ENSNNAG00000007040) #31 SF3B1 (ENSNNAG00000007064) #32 ANKRD44 (ENSNNAG00000007131) #33 PGAP1 (ENSNNAG00000007275) #36 GTF3C3 (ENSNNAG00000007525) CCDC150 (ENSNNAG00000007636) HECW2 (ENSNNAG00000007893) STK17B (ENSNNAG00000008143) ##17 Elapidae_a ANCESTRAL SPECIES 5 ENSGT00530000064199.k ENSGT00530000064199.l ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000163579 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393.e #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466.g ENSGT00940000154014.b.b ##17 Blue-lipped sea krait MODERN SPECIES 579 SATB2 (ENSLLTG00000006991) #22 Acanthophiinae ANCESTRAL SPECIES 7 ENSGT00530000064199.k ENSGT00530000064199.l ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000163579 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.c.b #12 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.n ##29 ENSGT00390000005727.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393.e #32 ENSGT00950000182908.D #33 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466.g ENSGT00940000154014.b.b ##17 Eastern brown snake MODERN SPECIES 7 ENSPTXG00000002638 ENSPTXG00000002639 NDUFB3 (ENSPTXG00000002643) HYCC2 (ENSPTXG00000002649) ORC2 (ENSPTXG00000002651) NIF3L1 (ENSPTXG00000002654) ENSPTXG00000002657 CLK1 (ENSPTXG00000002661) #8 BZW1 (ENSPTXG00000002667) #9 AOX1 (ENSPTXG00000002704) #12 KCTD18 (ENSPTXG00000004060) #15 SPATS2L (ENSPTXG00000004073) #16 MAIP1 (ENSPTXG00000004416) #18 TYW5 (ENSPTXG00000004418) #19 C2orf69 (ENSPTXG00000004419) #20 ENSPTXG00000004420 #22 ENSPTXG00000004422 PLCL1 (ENSPTXG00000004423) #24 BOLL (ENSPTXG00000004425) #25 RFTN2 (ENSPTXG00000004427) #27 MOB4 (ENSPTXG00000004429) #28 HSPE1 (ENSPTXG00000004431) ##29 HSPD1 (ENSPTXG00000004432) ##30 COQ10B (ENSPTXG00000004434) #31 SF3B1 (ENSPTXG00000004437) #32 ANKRD44 (ENSPTXG00000004451) #33 PGAP1 (ENSPTXG00000006428) #36 GTF3C3 (ENSPTXG00000006430) ENSPTXG00000006456 ENSPTXG00000006457 HECW2 (ENSPTXG00000006458) Mainland tiger snake MODERN SPECIES 21 ENSNSUG00000013078 ENSNSUG00000013079 NDUFB3 (ENSNSUG00000013082) HYCC2 (ENSNSUG00000013085) ORC2 (ENSNSUG00000013192) NIF3L1 (ENSNSUG00000013193) ENSNSUG00000013194 CLK1 (ENSNSUG00000013195) #8 BZW1 (ENSNSUG00000013196) #9 AOX1 (ENSNSUG00000013197) #12 KCTD18 (ENSNSUG00000013750) #15 SPATS2L (ENSNSUG00000013759) #16 MAIP1 (ENSNSUG00000013760) #18 TYW5 (ENSNSUG00000013761) #19 C2orf69 (ENSNSUG00000013762) #20 SATB2 (ENSNSUG00000013763) #22 PLCL1 (ENSNSUG00000013764) #24 BOLL (ENSNSUG00000013765) #25 RFTN2 (ENSNSUG00000013801) #27 MOB4 (ENSNSUG00000013835) #28 HSPE1 (ENSNSUG00000013836) ##29 HSPD1 (ENSNSUG00000013837) ##30 COQ10B (ENSNSUG00000013838) #31 SF3B1 (ENSNSUG00000013840) #32 ANKRD44 (ENSNSUG00000013841) #33 PGAP1 (ENSNSUG00000013842) #36 GTF3C3 (ENSNSUG00000013843) ENSNSUG00000013869 HECW2 (ENSNSUG00000013870) STK17B (ENSNSUG00000013871) ##17 DNAH7 (ENSNSUG00000013876) tuatara MODERN SPECIES 1814 ORC2 (ENSSPUG00000003152) NIF3L1 (ENSSPUG00000003130) PPIL3 (ENSSPUG00000003113) #7 CLK1 (ENSSPUG00000003057) #8 BZW1 (ENSSPUG00000003041) #9 ENSSPUG00000002295 #12 ENSSPUG00000001860 #12 ENSSPUG00000001654 #12 KCTD18 (ENSSPUG00000001600) #15 ENSSPUG00000001587 SPATS2L (ENSSPUG00000001564) #16 MAIP1 (ENSSPUG00000001474) #18 TYW5 (ENSSPUG00000001453) #19 C2orf69 (ENSSPUG00000001446) #20 FTCDNL1 (ENSSPUG00000001397) SATB2 (ENSSPUG00000001263) #22 Anura ANCESTRAL SPECIES 303 ENSGT00530000064234 #15 ENSGT00390000001138.b #16 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 Frog MODERN SPECIES 9 bmpr2 (ENSXETG00000022074) fam117b (ENSXETG00000022076) wdr12 (ENSXETG00000022077) carf (ENSXETG00000031604) nbeal1 (ENSXETG00000022086) dnah7 (ENSXETG00000022093) slc39a10 (ENSXETG00000022134) aox1 (ENSXETG00000034468) ##12 ENSXETG00000039500 #12 aox1 (ENSXETG00000022155) ##12 spats2l (ENSXETG00000041119) #16 tyw5 (ENSXETG00000031428) #19 maip1 (ENSXETG00000025128) #18 c2orf69 (ENSXETG00000018287) #20 XB5818974 [provisional] (ENSXETG00000018288) satb2 (ENSXETG00000035931) #22 plcl1 (ENSXETG00000032204) #24 ENSXETG00000045773 ENSXETG00000031296 tmem237 (ENSXETG00000027500) flacc1 (ENSXETG00000035925) trak2 (ENSXETG00000032904) casc3 (ENSXETG00000004143) casp8 (ENSXETG00000032748) ENSXETG00000041051 resf1 (ENSXETG00000004145) cflar (ENSXETG00000033867) bzw1 (ENSXETG00000030733) #9 orc2 (ENSXETG00000004151) c9orf64 (ENSXETG00000030274) c9orf64 (ENSXETG00000004152) Leishan spiny toad MODERN SPECIES 10 C9orf64 (ENSLLEG00000021144) ENSLLEG00000021218 ENSLLEG00000021462 #9 ENSLLEG00000021830 ##12 ENSLLEG00000022457 ##12 ENSLLEG00000022845 ##12 ENSLLEG00000024214 #12 ENSLLEG00000024411 ##12 KCTD18 (ENSLLEG00000024654) #15 ENSLLEG00000024716 #16 ENSLLEG00000024809 #18 TYW5 (ENSLLEG00000024861) #19 C2orf69 (ENSLLEG00000024970) #20 ENSLLEG00000024996 ENSLLEG00000025021 SATB2 (ENSLLEG00000025046) #22 PLCL1 (ENSLLEG00000025184) #24 MAP3K13 (ENSLLEG00000025313) TMEM41A (ENSLLEG00000025433) EHHADH (ENSLLEG00000025485) C3orf70 (ENSLLEG00000025562) VPS8 (ENSLLEG00000025606) DBR1 (ENSLLEG00000025945) ENSLLEG00000026077 ENSLLEG00000026233 ARMC8 (ENSLLEG00000026719) ENSLLEG00000027635 ADPRH (ENSLLEG00000005739) ENSLLEG00000005810 LRRC3 (ENSLLEG00000005820) ENSLLEG00000005849 Coelacanth MODERN SPECIES 267 ENSLACG00000018397 ENSLACG00000018337 KCTD18 (ENSLACG00000018201) #15 SPATS2L (ENSLACG00000018167) #16 MAIP1 (ENSLACG00000018077) #18 TYW5 (ENSLACG00000018061) #19 C2orf69 (ENSLACG00000018043) #20 ftcdnl1 (ENSLACG00000018033) SATB2 (ENSLACG00000017798) #22 PLCL1 (ENSLACG00000016887) #24 BOLL (ENSLACG00000015867) #25 ENSLACG00000015721 RFTN2 (ENSLACG00000015529) #27 MOB4 (ENSLACG00000015430) #28 HSPE1 (ENSLACG00000015377) #29 HSPD1 (ENSLACG00000015296) ##30 COQ10B (ENSLACG00000015175) #31 MGAT2 (ENSLACG00000015114) SF3B1 (ENSLACG00000014832) #32 ENSLACG00000013926 #33 ENSLACG00000013757 #33 PGAP1 (ENSLACG00000013127) #36 GTF3C3 (ENSLACG00000012329) HECW2 (ENSLACG00000009094)