Glires ANCESTRAL SPECIES 14 ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000009468 #37 ENSGT00390000016929 ENSGT00390000005285 Rodentia ANCESTRAL SPECIES 14 ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000009468 #37 ENSGT00390000016929 ENSGT00390000005285 Rodentia_B ANCESTRAL SPECIES 12 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000009468 #37 ENSGT00390000016929 ENSGT00390000005285 Myomorpha ANCESTRAL SPECIES 10 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000009468 #37 ENSGT00390000016929 ENSGT00390000005285 Muroidea ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000009468 #37 ENSGT00390000016929 ENSGT00390000005285 Muroidea_A ANCESTRAL SPECIES 19 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000157452 #23 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000009468 #37 ENSGT00390000016929 Murinae ANCESTRAL SPECIES 9 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000157452 #23 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000009468 #37 ENSGT00390000016929 Rat MODERN SPECIES 19 Orc2 (ENSRNOG00000012558) #7 Nif3l1 (ENSRNOG00000013446) #8 Ppil3 (ENSRNOG00000013636) #9 Clk1 (ENSRNOG00000025768) #10 Bzw1 (ENSRNOG00000013977) #11 Aox2 (ENSRNOG00000033923) #12 ENSRNOG00000068995 #13 Aox3 (ENSRNOG00000014555) #14 Aox1 (ENSRNOG00000015354) #15 Sgo2 (ENSRNOG00000027035) #16 Kctd18 (ENSRNOG00000027091) #17 Spats2l (ENSRNOG00000016012) #18 Maip1 (ENSRNOG00000015983) #19 Tyw5 (ENSRNOG00000010100) #20 RGD1306941 (ENSRNOG00000010185) #21 Satb2 (ENSRNOG00000010188) #22 Hsfy2 (ENSRNOG00000038569) #23 Plcl1 (ENSRNOG00000032659) #24 Boll (ENSRNOG00000054379) #25 Mars2 (ENSRNOG00000065339) #26 AABR07067762.1 (ENSRNOG00000055383) #27 Rftn2 (ENSRNOG00000015594) #28 Mob4 (ENSRNOG00000014980) #29 Hspe1 (ENSRNOG00000051624) #30 Hspd1 (ENSRNOG00000014525) #31 Coq10b (ENSRNOG00000014456) #32 Sf3b1 (ENSRNOG00000013516) #33 Tmem258b (ENSRNOG00000032740) #34 Ankrd44 (ENSRNOG00000021384) #35 Pgap1 (ENSRNOG00000013388) #36 LOC686030 (ENSRNOG00000067303) #37 Mus ANCESTRAL SPECIES 5 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b.m.a #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000157452 #23 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000009468 #37 ENSGT00390000016929 Mus_A ANCESTRAL SPECIES 5 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b.m.a #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493.c #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000157452 #23 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a.y.b #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000009468 #37 ENSGT00390000016929.b Mus_B ANCESTRAL SPECIES 7 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b.p #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b.m.a #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493.c #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000157452 #23 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a.y.b.a.a #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000009468 #37 ENSGT00390000016929.b Mus_C ANCESTRAL SPECIES 1 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b.p #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b.m.a #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493.c #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000157452 #23 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a.y.b.a.a #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000016929.b ENSGT00390000005285 spretus MODERN SPECIES Hycc2 (MGP_SPRETEiJ_G0014973) Orc2 (MGP_SPRETEiJ_G0014972) #7 Nif3l1 (MGP_SPRETEiJ_G0014971) #8 Ppil3 (MGP_SPRETEiJ_G0014970) Clk1 (MGP_SPRETEiJ_G0014969) #10 Bzw1 (MGP_SPRETEiJ_G0014968) #11 Aox2 (MGP_SPRETEiJ_G0014967) #12 Aox4 (MGP_SPRETEiJ_G0014966) #14 Aox3 (MGP_SPRETEiJ_G0014965) #14 Aox1 (MGP_SPRETEiJ_G0014964) #15 Sgo2a (MGP_SPRETEiJ_G0014963) #16 Kctd18 (MGP_SPRETEiJ_G0014962) #17 Spats2l (MGP_SPRETEiJ_G0014961) #18 Maip1 (MGP_SPRETEiJ_G0014960) #19 Tyw5 (MGP_SPRETEiJ_G0014959) #20 Satb2 (MGP_SPRETEiJ_G0014957) #22 Hsfy2 (MGP_SPRETEiJ_G0014956) #23 Plcl1 (MGP_SPRETEiJ_G0014955) #24 MGP_SPRETEiJ_G0014954 #25 Mars2 (MGP_SPRETEiJ_G0014953) #26 Rftn2 (MGP_SPRETEiJ_G0014952) #28 Mob4 (MGP_SPRETEiJ_G0014951) #29 MGP_SPRETEiJ_G0014950 #30 MGP_SPRETEiJ_G0014949 #31 MGP_SPRETEiJ_G0014948 #32 Sf3b1 (MGP_SPRETEiJ_G0014947) #33 Ankrd44 (MGP_SPRETEiJ_G0014946) #35 MGP_SPRETEiJ_G0014945 #36 Gtf3c3 (MGP_SPRETEiJ_G0014944) Ccdc150 (MGP_SPRETEiJ_G0014943) Hecw2 (MGP_SPRETEiJ_G0014942) Steppe mouse MODERN SPECIES 84 Maip1 (ENSMSIG00000012877) #19 Tyw5 (ENSMSIG00000012899) #20 1700066M21Rik (ENSMSIG00000012910) #21 Satb2 (ENSMSIG00000012940) #22 Hsfy2 (ENSMSIG00000013021) #23 Mouse MODERN SPECIES Orc2 (ENSMUSG00000026037) #7 Nif3l1 (ENSMUSG00000026036) #8 Ppil3 (ENSMUSG00000026035) Clk1 (ENSMUSG00000026034) #10 Bzw1 (ENSMUSG00000051223) #11 Aox2 (ENSMUSG00000079554) #12 Aox4 (ENSMUSG00000038242) #14 Aox3 (ENSMUSG00000064294) #14 Aox1 (ENSMUSG00000063558) #15 Sgo2a (ENSMUSG00000026039) #16 Kctd18 (ENSMUSG00000054770) #17 Spats2l (ENSMUSG00000038305) #18 Maip1 (ENSMUSG00000025971) #19 Tyw5 (ENSMUSG00000048495) #20 1700066M21Rik (ENSMUSG00000038323) #21 Satb2 (ENSMUSG00000038331) #22 Hsfy2 (ENSMUSG00000045336) #23 Plcl1 (ENSMUSG00000038349) #24 Boll (ENSMUSG00000025977) #25 Mars2 (ENSMUSG00000046994) #26 Rftn2 (ENSMUSG00000025978) #28 Mob4 (ENSMUSG00000025979) #29 Hspe1 (ENSMUSG00000073676) #30 Hspd1 (ENSMUSG00000025980) #31 Coq10b (ENSMUSG00000025981) #32 Sf3b1 (ENSMUSG00000025982) #33 Ankrd44 (ENSMUSG00000052331) #35 Pgap1 (ENSMUSG00000073678) #36 Gm34066 (ENSMUSG00000109809) #37 Gtf3c3 (ENSMUSG00000041303) Ccdc150 (ENSMUSG00000025983) Ryukyu mouse MODERN SPECIES Nif3l1 (MGP_CAROLIEiJ_G0014165) #8 Ppil3 (MGP_CAROLIEiJ_G0014164) Clk1 (MGP_CAROLIEiJ_G0014163) #10 Bzw1 (MGP_CAROLIEiJ_G0014162) #11 Aox2 (MGP_CAROLIEiJ_G0014161) #12 Aox4 (MGP_CAROLIEiJ_G0014160) #14 Aox3 (MGP_CAROLIEiJ_G0014159) #14 Aox1 (MGP_CAROLIEiJ_G0014158) #15 MGP_CAROLIEiJ_G0014157 #16 MGP_CAROLIEiJ_G0014156 #16 Kctd18 (MGP_CAROLIEiJ_G0014155) #17 Spats2l (MGP_CAROLIEiJ_G0014154) #18 Maip1 (MGP_CAROLIEiJ_G0014153) #19 Tyw5 (MGP_CAROLIEiJ_G0014152) #20 1700066M21Rik (MGP_CAROLIEiJ_G0014151) #21 Satb2 (MGP_CAROLIEiJ_G0014150) #22 Hsfy2 (MGP_CAROLIEiJ_G0014149) #23 Plcl1 (MGP_CAROLIEiJ_G0014148) #24 Mars2 (MGP_CAROLIEiJ_G0014147) #26 Rftn2 (MGP_CAROLIEiJ_G0014146) #28 Mob4 (MGP_CAROLIEiJ_G0014145) #29 MGP_CAROLIEiJ_G0014144 #30 Hspd1 (MGP_CAROLIEiJ_G0014143) #31 Coq10b (MGP_CAROLIEiJ_G0014142) #32 Sf3b1 (MGP_CAROLIEiJ_G0014141) #33 Ankrd44 (MGP_CAROLIEiJ_G0014140) #35 Pgap1 (MGP_CAROLIEiJ_G0014139) #36 MGP_CAROLIEiJ_G0014138 Ccdc150 (MGP_CAROLIEiJ_G0014137) Hecw2 (MGP_CAROLIEiJ_G0014136) Stk17b (MGP_CAROLIEiJ_G0014135) Shrew mouse MODERN SPECIES 18 Hycc2 (MGP_PahariEiJ_G0027405) Orc2 (MGP_PahariEiJ_G0027404) #7 Nif3l1 (MGP_PahariEiJ_G0027403) #8 Ppil3 (MGP_PahariEiJ_G0027402) Clk1 (MGP_PahariEiJ_G0027401) #10 Bzw1 (MGP_PahariEiJ_G0027400) #11 Aox4 (MGP_PahariEiJ_G0027399) #14 Aox3 (MGP_PahariEiJ_G0027398) #14 Aox1 (MGP_PahariEiJ_G0027397) #15 Sgo2a (MGP_PahariEiJ_G0027396) #16 Kctd18 (MGP_PahariEiJ_G0027395) #17 Spats2l (MGP_PahariEiJ_G0027394) #18 Maip1 (MGP_PahariEiJ_G0027393) #19 Tyw5 (MGP_PahariEiJ_G0027392) #20 1700066M21Rik (MGP_PahariEiJ_G0027391) #21 Satb2 (MGP_PahariEiJ_G0027390) #22 Hsfy2 (MGP_PahariEiJ_G0027389) #23 Plcl1 (MGP_PahariEiJ_G0027388) #24 Boll (MGP_PahariEiJ_G0027387) #25 Mars2 (MGP_PahariEiJ_G0027386) #26 Rftn2 (MGP_PahariEiJ_G0027385) #28 MGP_PahariEiJ_G0027384 #29 MGP_PahariEiJ_G0027383 #30 MGP_PahariEiJ_G0027382 #31 Coq10b (MGP_PahariEiJ_G0027381) #32 Ankrd44 (MGP_PahariEiJ_G0027379) #35 Pgap1 (MGP_PahariEiJ_G0027378) #36 Gtf3c3 (MGP_PahariEiJ_G0027377) Ccdc150 (MGP_PahariEiJ_G0027376) Hecw2 (MGP_PahariEiJ_G0027375) Stk17b (MGP_PahariEiJ_G0027374) Cricetidae ANCESTRAL SPECIES 19 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000157452 #23 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a #30 ENSGT00390000005727.a.b.b.w.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 Cricetinae ANCESTRAL SPECIES 3 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.b ##30 ENSGT00390000005727.a.b.b.w.a #31 ENSGT00390000005727.a.b.b.w.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 Chinese hamster chok1gshd MODERN SPECIES 1 Orc2 (ENSCGRG00001016911) #7 ENSCGRG00001018137 #8 Ppil3 (ENSCGRG00001021470) Clk1 (ENSCGRG00001018410) #10 Bzw1 (ENSCGRG00001017178) #11 Aox2 (ENSCGRG00001017735) #12 Aox4 (ENSCGRG00001016089) #14 Aox3 (ENSCGRG00001016559) #14 Aox1 (ENSCGRG00001018485) #15 ENSCGRG00001016045 #16 Kctd18 (ENSCGRG00001016666) #17 Spats2l (ENSCGRG00001019123) #18 Maip1 (ENSCGRG00001018639) #19 Tyw5 (ENSCGRG00001015297) #20 1700066M21Rik (ENSCGRG00001016585) #21 Satb2 (ENSCGRG00001019669) #22 Hsfy2 (ENSCGRG00001009926) #23 ENSCGRG00001010393 Plcl1 (ENSCGRG00001015676) #24 ENSCGRG00001009537 Boll (ENSCGRG00001020168) #25 Mars2 (ENSCGRG00001010364) #26 Rftn2 (ENSCGRG00001017788) #28 Mob4 (ENSCGRG00001024203) #29 ENSCGRG00001015345 ##30 HSPD1 (ENSCGRG00001021126) #31 Coq10b (ENSCGRG00001015271) #32 Sf3b1 (ENSCGRG00001016990) #33 Ankrd44 (ENSCGRG00001018584) #35 Pgap1 (ENSCGRG00001016707) #36 Gtf3c3 (ENSCGRG00001014543) Golden Hamster MODERN SPECIES 723 Aox1 (ENSMAUG00000014270) #15 ENSMAUG00000000248 #16 Kctd18 (ENSMAUG00000019856) #17 Spats2l (ENSMAUG00000016921) #18 Maip1 (ENSMAUG00000007424) #19 Tyw5 (ENSMAUG00000009449) #20 1700066M21Rik (ENSMAUG00000017438) #21 Satb2 (ENSMAUG00000008545) #22 Plcl1 (ENSMAUG00000003415) #24 Boll (ENSMAUG00000008224) #25 Mars2 (ENSMAUG00000017224) #26 Rftn2 (ENSMAUG00000014348) #28 ENSMAUG00000007042 #29 ENSMAUG00000017789 #31 Coq10b (ENSMAUG00000010644) #32 Sf3b1 (ENSMAUG00000009071) #33 Ankrd44 (ENSMAUG00000019633) #35 Pgap1 (ENSMAUG00000018155) #36 Gtf3c3 (ENSMAUG00000018770) Ccdc150 (ENSMAUG00000015624) Hecw2 (ENSMAUG00000011882) Stk17b (ENSMAUG00000018862) ENSMAUG00000020218 Cricetidae_B ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000157452 #23 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT00390000006350.m.a.c.a.`b #30 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a.ab #30 ENSGT00390000005727.a.b.b.w.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000016929 Prairie vole MODERN SPECIES 91 Hycc2 (ENSMOCG00000012367) Orc2 (ENSMOCG00000016158) #7 Nif3l1 (ENSMOCG00000012327) #8 ENSMOCG00000013096 ENSMOCG00000005608 #10 Bzw1 (ENSMOCG00000008375) #11 Aox2 (ENSMOCG00000018237) #12 Aox4 (ENSMOCG00000015766) #14 Aox1 (ENSMOCG00000001195) #15 ENSMOCG00000012099 #16 Kctd18 (ENSMOCG00000018835) #17 Spats2l (ENSMOCG00000006136) #18 Maip1 (ENSMOCG00000008182) #19 Tyw5 (ENSMOCG00000018540) #20 1700066M21Rik (ENSMOCG00000018970) #21 ENSMOCG00000005756 #22 Hsfy2 (ENSMOCG00000013974) #23 Plcl1 (ENSMOCG00000014862) #24 Boll (ENSMOCG00000022824) #25 Mars2 (ENSMOCG00000006676) #26 Rftn2 (ENSMOCG00000020060) #28 ENSMOCG00000000253 #30 Mob4 (ENSMOCG00000020652) #29 ENSMOCG00000002787 #31 Coq10b (ENSMOCG00000012636) #32 Sf3b1 (ENSMOCG00000000455) #33 ENSMOCG00000021330 #35 Pgap1 (ENSMOCG00000013936) #36 Gtf3c3 (ENSMOCG00000019654) Ccdc150 (ENSMOCG00000001399) Hecw2 (ENSMOCG00000012140) Northern American deer mouse MODERN SPECIES 4 Hycc2 (ENSPEMG00000014604) Orc2 (ENSPEMG00000010035) #7 Nif3l1 (ENSPEMG00000023040) #8 Ppil3 (ENSPEMG00000011585) Clk1 (ENSPEMG00000022508) #10 ENSPEMG00000013940 #11 Aox2 (ENSPEMG00000022861) #12 ENSPEMG00000027085 #14 Aox1 (ENSPEMG00000000656) #15 ENSPEMG00000020091 #16 Kctd18 (ENSPEMG00000028635) #17 Spats2l (ENSPEMG00000020003) #18 Maip1 (ENSPEMG00000015287) #19 Tyw5 (ENSPEMG00000009506) #20 1700066M21Rik (ENSPEMG00000001657) #21 Satb2 (ENSPEMG00000013811) #22 Hsfy2 (ENSPEMG00000029057) #23 Plcl1 (ENSPEMG00000001849) #24 ENSPEMG00000024520 Boll (ENSPEMG00000018168) #25 Mars2 (ENSPEMG00000008377) #26 Rftn2 (ENSPEMG00000000048) #28 Mob4 (ENSPEMG00000017361) #29 ENSPEMG00000029712 ENSPEMG00000010504 #30 Hspd1 (ENSPEMG00000015411) #31 Coq10b (ENSPEMG00000005817) #32 Sf3b1 (ENSPEMG00000010699) #33 Ankrd44 (ENSPEMG00000016873) #35 Pgap1 (ENSPEMG00000008939) #36 ENSPEMG00000024521 Upper Galilee mountains blind mole rat MODERN SPECIES 417 ENSNGAG00000023509 #7 ENSNGAG00000022183 #8 Ppil3 (ENSNGAG00000014999) ENSNGAG00000010384 #10 Bzw1 (ENSNGAG00000014200) #11 Aox2 (ENSNGAG00000021935) #12 Aox4 (ENSNGAG00000001220) #14 Aox3 (ENSNGAG00000019159) #14 Aox1 (ENSNGAG00000018103) #15 ENSNGAG00000017175 #16 Kctd18 (ENSNGAG00000011886) #17 Spats2l (ENSNGAG00000009131) #18 Maip1 (ENSNGAG00000013388) #19 Tyw5 (ENSNGAG00000022701) #20 1700066M21Rik (ENSNGAG00000015731) #21 Satb2 (ENSNGAG00000023604) #22 Plcl1 (ENSNGAG00000017912) #24 ENSNGAG00000014596 #25 Lesser Egyptian jerboa MODERN SPECIES 52 ENSJJAG00000013473 #9 Clk1 (ENSJJAG00000024354) #10 Bzw1 (ENSJJAG00000022065) #11 Aox2 (ENSJJAG00000011668) #12 Aox4 (ENSJJAG00000017799) #14 Aox1 (ENSJJAG00000019598) #15 ENSJJAG00000015058 #16 Kctd18 (ENSJJAG00000016069) #17 Spats2l (ENSJJAG00000019268) #18 ENSJJAG00000010933 ENSJJAG00000012063 Maip1 (ENSJJAG00000023816) #19 Tyw5 (ENSJJAG00000019361) #20 1700066M21Rik (ENSJJAG00000019976) #21 ENSJJAG00000023987 Satb2 (ENSJJAG00000019883) #22 ENSJJAG00000012932 Plcl1 (ENSJJAG00000024297) #24 Boll (ENSJJAG00000015508) #25 Mars2 (ENSJJAG00000023940) #26 Rftn2 (ENSJJAG00000002223) #28 ENSJJAG00000009865 #29 ENSJJAG00000012025 #30 ENSJJAG00000016713 #31 Coq10b (ENSJJAG00000020646) #32 Sf3b1 (ENSJJAG00000010903) #33 ENSJJAG00000018305 Ankrd44 (ENSJJAG00000016107) #35 Pgap1 (ENSJJAG00000009924) #36 Gtf3c3 (ENSJJAG00000004649) Hecw2 (ENSJJAG00000022806) Kangaroo rat MODERN SPECIES 320 ENSDORG00000024018 Hycc2 (ENSDORG00000029531) Orc2 (ENSDORG00000007391) #7 Nif3l1 (ENSDORG00000007390) #8 Ppil3 (ENSDORG00000007389) Clk1 (ENSDORG00000007388) #10 Bzw1 (ENSDORG00000029865) #11 Aox2 (ENSDORG00000026718) #12 Aox4 (ENSDORG00000026668) #14 Aox3 (ENSDORG00000025305) #14 Aox1 (ENSDORG00000004358) #15 Kctd18 (ENSDORG00000007817) #17 Spats2l (ENSDORG00000007816) #18 Maip1 (ENSDORG00000012569) #19 Tyw5 (ENSDORG00000012567) #20 Satb2 (ENSDORG00000001292) #22 Plcl1 (ENSDORG00000000485) #24 Boll (ENSDORG00000010791) #25 Mars2 (ENSDORG00000010789) #26 Rftn2 (ENSDORG00000008999) #28 Mob4 (ENSDORG00000023241) #29 ENSDORG00000011071 ##30 Hspd1 (ENSDORG00000011069) ##31 Coq10b (ENSDORG00000025804) #32 Sf3b1 (ENSDORG00000002399) #33 ENSDORG00000029693 #35 ENSDORG00000024945 Pgap1 (ENSDORG00000000406) #36 Gtf3c3 (ENSDORG00000000403) Hecw2 (ENSDORG00000014759) Stk17b (ENSDORG00000029601) Rodentia_A ANCESTRAL SPECIES 13 ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a #30 ENSGT00390000005727.a.b.b #31 ENSGT00390000006350.m.a.c.b.b ##30 ENSGT00390000005727.a.b.a.b ##31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000009468 #37 ENSGT00390000016929 Sciuridae ANCESTRAL SPECIES 10 ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a #30 ENSGT00390000005727.a.b.b #31 ENSGT00390000005727.a.b.a.b ##31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 Marmotini ANCESTRAL SPECIES 2 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b.v #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000005581.b ENSGT00390000012178.g.a.a ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a.v #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 Marmotini_b ANCESTRAL SPECIES 91 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000005581.b ENSGT00390000012178.g.a.a ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a.v #30 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 Squirrel MODERN SPECIES 106 SATB2 (ENSSTOG00000024964) #22 PLCL1 (ENSSTOG00000026164) #24 BOLL (ENSSTOG00000003536) #25 MARS2 (ENSSTOG00000015451) #26 RFTN2 (ENSSTOG00000015446) #28 MOB4 (ENSSTOG00000021024) #29 ENSSTOG00000031333 #30 ENSSTOG00000028470 #31 COQ10B (ENSSTOG00000011048) #32 SF3B1 (ENSSTOG00000011034) #33 ANKRD44 (ENSSTOG00000012130) #35 PGAP1 (ENSSTOG00000010633) #36 GTF3C3 (ENSSTOG00000011894) ENSSTOG00000014552 HECW2 (ENSSTOG00000015188) STK17B (ENSSTOG00000020599) Arctic ground squirrel MODERN SPECIES 210 ENSUPAG00010015923 #14 AOX1 (ENSUPAG00010015861) #15 SGO2 (ENSUPAG00010015843) #16 KCTD18 (ENSUPAG00010015819) #17 SPATS2L (ENSUPAG00010015777) #18 MAIP1 (ENSUPAG00010015760) #19 TYW5 (ENSUPAG00010015739) #20 C2orf69 (ENSUPAG00010015730) #21 FTCDNL1 (ENSUPAG00010015721) ENSUPAG00010015718 SATB2 (ENSUPAG00010015643) #22 PLCL1 (ENSUPAG00010015612) #24 BOLL (ENSUPAG00010015589) #25 MARS2 (ENSUPAG00010015585) #26 RFTN2 (ENSUPAG00010015580) #28 ENSUPAG00010015569 ##30 ENSUPAG00010015563 ##31 COQ10B (ENSUPAG00010015540) #32 SF3B1 (ENSUPAG00010015518) #33 Alpin marmot MODERN SPECIES 8 PPIL3 (ENSMMMG00000012069) CLK1 (ENSMMMG00000012051) #10 ENSMMMG00000012026 #11 ENSMMMG00000011976 #12 ENSMMMG00000011959 ENSMMMG00000011912 #14 AOX1 (ENSMMMG00000011886) #15 ENSMMMG00000011877 #16 KCTD18 (ENSMMMG00000011839) #17 SPATS2L (ENSMMMG00000011689) #18 MAIP1 (ENSMMMG00000011679) #19 TYW5 (ENSMMMG00000011668) #20 C2orf69 (ENSMMMG00000011660) #21 FTCDNL1 (ENSMMMG00000011655) ENSMMMG00000011650 SATB2 (ENSMMMG00000011551) #22 ENSMMMG00000011481 PLCL1 (ENSMMMG00000011429) #24 BOLL (ENSMMMG00000011354) #25 MARS2 (ENSMMMG00000011347) #26 RFTN2 (ENSMMMG00000011220) #28 ENSMMMG00000011174 #29 ENSMMMG00000011161 #30 ENSMMMG00000011138 ##31 ENSMMMG00000011101 #32 SF3B1 (ENSMMMG00000011081) #33 ANKRD44 (ENSMMMG00000010980) #35 PGAP1 (ENSMMMG00000010912) #36 GTF3C3 (ENSMMMG00000010874) ENSMMMG00000010858 ENSMMMG00000010842 Eurasian red squirrel MODERN SPECIES 12 NIF3L1 (ENSSVLG00005004091) #8 PPIL3 (ENSSVLG00005004070) CLK1 (ENSSVLG00005004020) #10 BZW1 (ENSSVLG00005003945) #11 ENSSVLG00005003845 #12 ENSSVLG00005003767 #14 AOX1 (ENSSVLG00005003683) #15 SGO2 (ENSSVLG00005003633) #16 ENSSVLG00005003604 #17 SPATS2L (ENSSVLG00005003512) #18 MAIP1 (ENSSVLG00005003433) #19 TYW5 (ENSSVLG00005003405) #20 C2orf69 (ENSSVLG00005003387) #21 FTCDNL1 (ENSSVLG00005003343) ENSSVLG00005003317 SATB2 (ENSSVLG00005003278) #22 PLCL1 (ENSSVLG00005003227) #24 ENSSVLG00005003207 BOLL (ENSSVLG00005003123) #25 MARS2 (ENSSVLG00005003085) #26 RFTN2 (ENSSVLG00005003057) #28 MOB4 (ENSSVLG00005002989) #29 HSPE1 (ENSSVLG00005002940) #30 ENSSVLG00005002895 ##31 ENSSVLG00005002862 #32 SF3B1 (ENSSVLG00005002801) #33 ANKRD44 (ENSSVLG00005002705) #35 PGAP1 (ENSSVLG00005002564) #36 C2orf66 (ENSSVLG00005002524) #37 ENSSVLG00005002519 GTF3C3 (ENSSVLG00005002487) Hystricomorpha ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.b.b ##30 ENSGT00390000005727.a.b.a.b ##31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 Hystricomorpha_a ANCESTRAL SPECIES 17 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.b.b ##30 ENSGT00390000005727.a.b.a.b ##31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 Hystricomorpha_b ANCESTRAL SPECIES 24 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.b.b.a.b ##30 ENSGT00390000005727.a.b.a.b ##31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000016929 ENSGT00390000005285 ENSGT00940000155466 ENSGT00940000154014.b.b Degu MODERN SPECIES 66 ENSODEG00000007860 ORC2 (ENSODEG00000008853) #7 NIF3L1 (ENSODEG00000008894) #8 PPIL3 (ENSODEG00000007592) CLK1 (ENSODEG00000009021) #10 ENSODEG00000019563 ENSODEG00000008411 #11 ENSODEG00000008135 #12 ENSODEG00000011138 #14 AOX1 (ENSODEG00000012914) #15 ENSODEG00000009211 #17 SPATS2L (ENSODEG00000009851) #18 MAIP1 (ENSODEG00000008914) #19 TYW5 (ENSODEG00000009836) #20 C2orf69 (ENSODEG00000008700) #21 SATB2 (ENSODEG00000008383) #22 PLCL1 (ENSODEG00000008918) #24 BOLL (ENSODEG00000008471) #25 RFTN2 (ENSODEG00000008704) #28 MOB4 (ENSODEG00000009609) #29 ENSODEG00000019874 ENSODEG00000011397 ##30 ENSODEG00000009026 ##31 COQ10B (ENSODEG00000008396) #32 ENSODEG00000011153 #33 ENSODEG00000019820 ENSODEG00000008898 #35 ENSODEG00000008698 ENSODEG00000009525 PGAP1 (ENSODEG00000009932) #36 ENSODEG00000009843 Long-tailed chinchilla MODERN SPECIES 110 HYCC2 (ENSCLAG00000011177) ORC2 (ENSCLAG00000013209) #7 NIF3L1 (ENSCLAG00000013524) #8 PPIL3 (ENSCLAG00000014050) CLK1 (ENSCLAG00000011455) #10 BZW1 (ENSCLAG00000012079) #11 ENSCLAG00000011199 #12 ENSCLAG00000014402 #14 AOX1 (ENSCLAG00000011481) #15 ENSCLAG00000012456 #16 ENSCLAG00000014377 #17 SPATS2L (ENSCLAG00000013167) #18 MAIP1 (ENSCLAG00000011913) #19 TYW5 (ENSCLAG00000012009) #20 C2orf69 (ENSCLAG00000012813) #21 SATB2 (ENSCLAG00000016994) #22 PLCL1 (ENSCLAG00000016098) #24 BOLL (ENSCLAG00000017375) #25 MARS2 (ENSCLAG00000010386) #26 RFTN2 (ENSCLAG00000009821) #28 MOB4 (ENSCLAG00000010086) #29 ENSCLAG00000010686 ##30 HSPD1 (ENSCLAG00000011541) ##31 COQ10B (ENSCLAG00000017377) #32 SF3B1 (ENSCLAG00000014767) #33 ANKRD44 (ENSCLAG00000015396) #35 PGAP1 (ENSCLAG00000011838) #36 GTF3C3 (ENSCLAG00000009827) CCDC150 (ENSCLAG00000012365) HECW2 (ENSCLAG00000011628) STK17B (ENSCLAG00000012520) Guinea pig MODERN SPECIES 104 HYCC2 (ENSCPOG00000010108) ORC2 (ENSCPOG00000004552) #7 NIF3L1 (ENSCPOG00000008572) #8 PPIL3 (ENSCPOG00000008570) CLK1 (ENSCPOG00000027067) #10 ENSCPOG00000010449 #11 ENSCPOG00000019962 #12 ENSCPOG00000033032 #14 Aox1 (ENSCPOG00000025955) #15 ENSCPOG00000002722 #16 ENSCPOG00000012077 #17 SPATS2L (ENSCPOG00000003190) #18 MAIP1 (ENSCPOG00000003800) #19 TYW5 (ENSCPOG00000035856) #20 C2orf69 (ENSCPOG00000009934) #21 SATB2 (ENSCPOG00000015198) #22 PLCL1 (ENSCPOG00000011478) #24 BOLL (ENSCPOG00000000390) #25 MARS2 (ENSCPOG00000025973) #26 RFTN2 (ENSCPOG00000010463) #28 MOB4 (ENSCPOG00000012746) #29 ENSCPOG00000027474 ##30 HSPD1 (ENSCPOG00000002588) ##31 COQ10B (ENSCPOG00000002673) #32 SF3B1 (ENSCPOG00000009353) #33 ANKRD44 (ENSCPOG00000026494) #35 PGAP1 (ENSCPOG00000003177) #36 GTF3C3 (ENSCPOG00000006643) CCDC150 (ENSCPOG00000031267) ENSCPOG00000040067 HECW2 (ENSCPOG00000008908) Naked mole-rat female MODERN SPECIES 22 PPIL3 (ENSHGLG00000035729) Clk1 (ENSHGLG00000011322) #10 BZW1 (ENSHGLG00000011961) #11 ENSHGLG00000012205 #12 Aox4 (ENSHGLG00000012471) #14 AOX1 (ENSHGLG00000012876) #15 SGO2 (ENSHGLG00000015359) #16 ENSHGLG00000047532 ENSHGLG00000015370 #17 SPATS2L (ENSHGLG00000015420) #18 ENSHGLG00000017615 MAIP1 (ENSHGLG00000017548) #19 TYW5 (ENSHGLG00000017557) #20 C2orf69 (ENSHGLG00000040936) #21 ENSHGLG00000020697 SATB2 (ENSHGLG00000015892) #22 ENSHGLG00000043283 PLCL1 (ENSHGLG00000015970) #24 BOLL (ENSHGLG00000017562) #25 MARS2 (ENSHGLG00000049320) #26 RFTN2 (ENSHGLG00000017636) #28 MOB4 (ENSHGLG00000050196) #29 ENSHGLG00000042669 ##30 HSPD1 (ENSHGLG00000007927) ##31 ENSHGLG00000038699 #32 ENSHGLG00000008285 #33 ANKRD44 (ENSHGLG00000008625) #35 ENSHGLG00000049153 ENSHGLG00000040344 ENSHGLG00000008965 #36 ENSHGLG00000042696 Lagomorpha ANCESTRAL SPECIES 13 ENSGT00390000011295.a ENSGT00390000015228 #7 ENSGT00390000003590 #8 ENSGT00940000153189.B ENSGT00940000159722 #10 ENSGT00390000012561.b #11 ENSGT00950000183114.a.b.b.f.a.b #12 ENSGT00950000183114.a.b.b.f.a.a #14 ENSGT00950000183114.a.b.b.f.b #15 ENSGT00940000154107.b #16 ENSGT00530000064234 #17 ENSGT00390000001138.b #18 ENSGT00390000004145 #19 ENSGT00940000158493 #20 ENSGT00390000005550 #21 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #28 ENSGT01050000244956.b.d #29 ENSGT00390000006350.m.a.c.a #30 ENSGT00390000005727.a.b.a.b ##31 ENSGT00390000005727.a.b.b #31 ENSGT00940000155367 #32 ENSGT00390000018393 #33 ENSGT00950000182908.D #35 ENSGT00390000016484 #36 ENSGT00390000009468 #37 ENSGT00390000016929 ENSGT00390000005285 Rabbit MODERN SPECIES 18 PPIL3 (ENSOCUG00000010661) CLK1 (ENSOCUG00000010653) #10 ENSOCUG00000010647 #11 ENSOCUG00000026480 #12 ENSOCUG00000024593 #14 ENSOCUG00000035654 #14 AOX1 (ENSOCUG00000013971) #15 ENSOCUG00000000547 #16 ENSOCUG00000037416 #16 KCTD18 (ENSOCUG00000011556) #17 SPATS2L (ENSOCUG00000011549) #18 ENSOCUG00000017946 #19 ENSOCUG00000035705 #20 ENSOCUG00000016464 #20 C2orf69 (ENSOCUG00000016473) #21 SATB2 (ENSOCUG00000009700) #22 PLCL1 (ENSOCUG00000013978) #24 BOLL (ENSOCUG00000013979) #25 MARS2 (ENSOCUG00000017798) #26 RFTN2 (ENSOCUG00000003993) #28 ENSOCUG00000005712 #29 HSPE1 (ENSOCUG00000010360) #30 HSPD1 (ENSOCUG00000012736) ##31 COQ10B (ENSOCUG00000012735) #32 ENSOCUG00000000205 ENSOCUG00000029492 #33 ENSOCUG00000012722 #33 ANKRD44 (ENSOCUG00000009183) #35 PGAP1 (ENSOCUG00000002192) #36 C2orf66 (ENSOCUG00000028999) #37 GTF3C3 (ENSOCUG00000000463) Pika MODERN SPECIES 573 MAIP1 (ENSOPRG00000004142) #19 TYW5 (ENSOPRG00000004133) #20 C2orf69 (ENSOPRG00000004115) #21 SATB2 (ENSOPRG00000003979) #22