Boreoeutheria ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.b.a.b ##29 ENSGT00390000005727.a.b.a.b ##30 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 Euarchontoglires ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.b.b ##29 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.b ##29 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Glires ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Rodentia ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Rodentia_B ANCESTRAL SPECIES 12 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Myomorpha ANCESTRAL SPECIES 10 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Lesser Egyptian jerboa MODERN SPECIES 52 ENSJJAG00000013473 #7 Clk1 (ENSJJAG00000024354) #8 Bzw1 (ENSJJAG00000022065) #9 Aox2 (ENSJJAG00000011668) #10 Aox4 (ENSJJAG00000017799) #11 Aox1 (ENSJJAG00000019598) #12 ENSJJAG00000015058 #13 Kctd18 (ENSJJAG00000016069) #14 Spats2l (ENSJJAG00000019268) #15 ENSJJAG00000010933 #16 ENSJJAG00000012063 #17 Maip1 (ENSJJAG00000023816) #18 Tyw5 (ENSJJAG00000019361) #19 1700066M21Rik (ENSJJAG00000019976) #20 ENSJJAG00000023987 #21 Satb2 (ENSJJAG00000019883) #22 ENSJJAG00000012932 #23 Plcl1 (ENSJJAG00000024297) #24 Boll (ENSJJAG00000015508) #25 Mars2 (ENSJJAG00000023940) #26 Rftn2 (ENSJJAG00000002223) #27 ENSJJAG00000009865 #28 ENSJJAG00000012025 #29 ENSJJAG00000016713 #30 Coq10b (ENSJJAG00000020646) #31 Sf3b1 (ENSJJAG00000010903) #32 ENSJJAG00000018305 #33 Ankrd44 (ENSJJAG00000016107) #34 Pgap1 (ENSJJAG00000009924) #35 Gtf3c3 (ENSJJAG00000004649) #36 Hecw2 (ENSJJAG00000022806) #37 Muroidea ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Upper Galilee mountains blind mole rat MODERN SPECIES 417 ENSNGAG00000023509 ENSNGAG00000022183 Ppil3 (ENSNGAG00000014999) ENSNGAG00000010384 #8 Bzw1 (ENSNGAG00000014200) #9 Aox2 (ENSNGAG00000021935) #10 Aox4 (ENSNGAG00000001220) #11 Aox3 (ENSNGAG00000019159) #11 Aox1 (ENSNGAG00000018103) #12 ENSNGAG00000017175 #13 Kctd18 (ENSNGAG00000011886) #14 Spats2l (ENSNGAG00000009131) #15 Maip1 (ENSNGAG00000013388) #18 Tyw5 (ENSNGAG00000022701) #19 1700066M21Rik (ENSNGAG00000015731) #20 Satb2 (ENSNGAG00000023604) #22 Plcl1 (ENSNGAG00000017912) #24 ENSNGAG00000014596 #25 Muroidea_A ANCESTRAL SPECIES 19 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Murinae ANCESTRAL SPECIES 9 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Mus ANCESTRAL SPECIES 5 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b.m.a #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Mus_A ANCESTRAL SPECIES 5 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b.m.a #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493.c #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a.y.b #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929.b #36 Mus_B ANCESTRAL SPECIES 7 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b.p #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b.m.a #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493.c #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a.y.b.a.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929.b #36 Mus_C ANCESTRAL SPECIES 1 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b.p #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b.m.a #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493.c #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a.y.b.a.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000016929.b #36 ENSGT00390000005285 spretus MODERN SPECIES Hycc2 (MGP_SPRETEiJ_G0014973) Orc2 (MGP_SPRETEiJ_G0014972) Nif3l1 (MGP_SPRETEiJ_G0014971) Ppil3 (MGP_SPRETEiJ_G0014970) Clk1 (MGP_SPRETEiJ_G0014969) #8 Bzw1 (MGP_SPRETEiJ_G0014968) #9 Aox2 (MGP_SPRETEiJ_G0014967) #10 Aox4 (MGP_SPRETEiJ_G0014966) #11 Aox3 (MGP_SPRETEiJ_G0014965) #11 Aox1 (MGP_SPRETEiJ_G0014964) #12 Sgo2a (MGP_SPRETEiJ_G0014963) #13 Kctd18 (MGP_SPRETEiJ_G0014962) #14 Spats2l (MGP_SPRETEiJ_G0014961) #15 Maip1 (MGP_SPRETEiJ_G0014960) #18 Tyw5 (MGP_SPRETEiJ_G0014959) #19 Satb2 (MGP_SPRETEiJ_G0014957) #22 Hsfy2 (MGP_SPRETEiJ_G0014956) Plcl1 (MGP_SPRETEiJ_G0014955) #24 MGP_SPRETEiJ_G0014954 #25 Mars2 (MGP_SPRETEiJ_G0014953) #26 Rftn2 (MGP_SPRETEiJ_G0014952) #27 Mob4 (MGP_SPRETEiJ_G0014951) #28 MGP_SPRETEiJ_G0014950 #29 MGP_SPRETEiJ_G0014949 #30 MGP_SPRETEiJ_G0014948 #31 Sf3b1 (MGP_SPRETEiJ_G0014947) #32 Ankrd44 (MGP_SPRETEiJ_G0014946) #34 MGP_SPRETEiJ_G0014945 #35 Gtf3c3 (MGP_SPRETEiJ_G0014944) #36 Ccdc150 (MGP_SPRETEiJ_G0014943) Hecw2 (MGP_SPRETEiJ_G0014942) #37 Steppe mouse MODERN SPECIES 84 Maip1 (ENSMSIG00000012877) #18 Tyw5 (ENSMSIG00000012899) #19 1700066M21Rik (ENSMSIG00000012910) #20 Satb2 (ENSMSIG00000012940) #22 Hsfy2 (ENSMSIG00000013021) Mouse MODERN SPECIES Orc2 (ENSMUSG00000026037) Nif3l1 (ENSMUSG00000026036) Ppil3 (ENSMUSG00000026035) Clk1 (ENSMUSG00000026034) #8 Bzw1 (ENSMUSG00000051223) #9 Aox2 (ENSMUSG00000079554) #10 Aox4 (ENSMUSG00000038242) #11 Aox3 (ENSMUSG00000064294) #11 Aox1 (ENSMUSG00000063558) #12 Sgo2a (ENSMUSG00000026039) #13 Kctd18 (ENSMUSG00000054770) #14 Spats2l (ENSMUSG00000038305) #15 Maip1 (ENSMUSG00000025971) #18 Tyw5 (ENSMUSG00000048495) #19 1700066M21Rik (ENSMUSG00000038323) #20 Satb2 (ENSMUSG00000038331) #22 Hsfy2 (ENSMUSG00000045336) Plcl1 (ENSMUSG00000038349) #24 Boll (ENSMUSG00000025977) #25 Mars2 (ENSMUSG00000046994) #26 Rftn2 (ENSMUSG00000025978) #27 Mob4 (ENSMUSG00000025979) #28 Hspe1 (ENSMUSG00000073676) #29 Hspd1 (ENSMUSG00000025980) #30 Coq10b (ENSMUSG00000025981) #31 Sf3b1 (ENSMUSG00000025982) #32 Ankrd44 (ENSMUSG00000052331) #34 Pgap1 (ENSMUSG00000073678) #35 Gm34066 (ENSMUSG00000109809) Gtf3c3 (ENSMUSG00000041303) #36 Ccdc150 (ENSMUSG00000025983) Ryukyu mouse MODERN SPECIES Nif3l1 (MGP_CAROLIEiJ_G0014165) Ppil3 (MGP_CAROLIEiJ_G0014164) Clk1 (MGP_CAROLIEiJ_G0014163) #8 Bzw1 (MGP_CAROLIEiJ_G0014162) #9 Aox2 (MGP_CAROLIEiJ_G0014161) #10 Aox4 (MGP_CAROLIEiJ_G0014160) #11 Aox3 (MGP_CAROLIEiJ_G0014159) #11 Aox1 (MGP_CAROLIEiJ_G0014158) #12 MGP_CAROLIEiJ_G0014157 #13 MGP_CAROLIEiJ_G0014156 #13 Kctd18 (MGP_CAROLIEiJ_G0014155) #14 Spats2l (MGP_CAROLIEiJ_G0014154) #15 Maip1 (MGP_CAROLIEiJ_G0014153) #18 Tyw5 (MGP_CAROLIEiJ_G0014152) #19 1700066M21Rik (MGP_CAROLIEiJ_G0014151) #20 Satb2 (MGP_CAROLIEiJ_G0014150) #22 Hsfy2 (MGP_CAROLIEiJ_G0014149) Plcl1 (MGP_CAROLIEiJ_G0014148) #24 Mars2 (MGP_CAROLIEiJ_G0014147) #26 Rftn2 (MGP_CAROLIEiJ_G0014146) #27 Mob4 (MGP_CAROLIEiJ_G0014145) #28 MGP_CAROLIEiJ_G0014144 #29 Hspd1 (MGP_CAROLIEiJ_G0014143) #30 Coq10b (MGP_CAROLIEiJ_G0014142) #31 Sf3b1 (MGP_CAROLIEiJ_G0014141) #32 Ankrd44 (MGP_CAROLIEiJ_G0014140) #34 Pgap1 (MGP_CAROLIEiJ_G0014139) #35 MGP_CAROLIEiJ_G0014138 #36 Ccdc150 (MGP_CAROLIEiJ_G0014137) Hecw2 (MGP_CAROLIEiJ_G0014136) #37 Stk17b (MGP_CAROLIEiJ_G0014135) Shrew mouse MODERN SPECIES 18 Hycc2 (MGP_PahariEiJ_G0027405) Orc2 (MGP_PahariEiJ_G0027404) Nif3l1 (MGP_PahariEiJ_G0027403) Ppil3 (MGP_PahariEiJ_G0027402) Clk1 (MGP_PahariEiJ_G0027401) #8 Bzw1 (MGP_PahariEiJ_G0027400) #9 Aox4 (MGP_PahariEiJ_G0027399) #11 Aox3 (MGP_PahariEiJ_G0027398) #11 Aox1 (MGP_PahariEiJ_G0027397) #12 Sgo2a (MGP_PahariEiJ_G0027396) #13 Kctd18 (MGP_PahariEiJ_G0027395) #14 Spats2l (MGP_PahariEiJ_G0027394) #15 Maip1 (MGP_PahariEiJ_G0027393) #18 Tyw5 (MGP_PahariEiJ_G0027392) #19 1700066M21Rik (MGP_PahariEiJ_G0027391) #20 Satb2 (MGP_PahariEiJ_G0027390) #22 Hsfy2 (MGP_PahariEiJ_G0027389) Plcl1 (MGP_PahariEiJ_G0027388) #24 Boll (MGP_PahariEiJ_G0027387) #25 Mars2 (MGP_PahariEiJ_G0027386) #26 Rftn2 (MGP_PahariEiJ_G0027385) #27 MGP_PahariEiJ_G0027384 #28 MGP_PahariEiJ_G0027383 #29 MGP_PahariEiJ_G0027382 #30 Coq10b (MGP_PahariEiJ_G0027381) #31 Ankrd44 (MGP_PahariEiJ_G0027379) #34 Pgap1 (MGP_PahariEiJ_G0027378) #35 Gtf3c3 (MGP_PahariEiJ_G0027377) #36 Ccdc150 (MGP_PahariEiJ_G0027376) Hecw2 (MGP_PahariEiJ_G0027375) #37 Stk17b (MGP_PahariEiJ_G0027374) Rat MODERN SPECIES 19 Orc2 (ENSRNOG00000012558) Nif3l1 (ENSRNOG00000013446) Ppil3 (ENSRNOG00000013636) #7 Clk1 (ENSRNOG00000025768) #8 Bzw1 (ENSRNOG00000013977) #9 Aox2 (ENSRNOG00000033923) #10 ENSRNOG00000068995 Aox3 (ENSRNOG00000014555) #11 Aox1 (ENSRNOG00000015354) #12 Sgo2 (ENSRNOG00000027035) #13 Kctd18 (ENSRNOG00000027091) #14 Spats2l (ENSRNOG00000016012) #15 Maip1 (ENSRNOG00000015983) #18 Tyw5 (ENSRNOG00000010100) #19 RGD1306941 (ENSRNOG00000010185) #20 Satb2 (ENSRNOG00000010188) #22 Hsfy2 (ENSRNOG00000038569) Plcl1 (ENSRNOG00000032659) #24 Boll (ENSRNOG00000054379) #25 Mars2 (ENSRNOG00000065339) #26 AABR07067762.1 (ENSRNOG00000055383) Rftn2 (ENSRNOG00000015594) #27 Mob4 (ENSRNOG00000014980) #28 Hspe1 (ENSRNOG00000051624) #29 Hspd1 (ENSRNOG00000014525) #30 Coq10b (ENSRNOG00000014456) #31 Sf3b1 (ENSRNOG00000013516) #32 Tmem258b (ENSRNOG00000032740) Ankrd44 (ENSRNOG00000021384) #34 Pgap1 (ENSRNOG00000013388) #35 LOC686030 (ENSRNOG00000067303) Cricetidae ANCESTRAL SPECIES 19 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b.w.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000016929 #36 ENSGT00390000005285 Cricetinae ANCESTRAL SPECIES 3 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.b ##29 ENSGT00390000005727.a.b.b.w.a #30 ENSGT00390000005727.a.b.b.w.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 Chinese hamster chok1gshd MODERN SPECIES 1 Orc2 (ENSCGRG00001016911) ENSCGRG00001018137 Ppil3 (ENSCGRG00001021470) Clk1 (ENSCGRG00001018410) #8 Bzw1 (ENSCGRG00001017178) #9 Aox2 (ENSCGRG00001017735) #10 Aox4 (ENSCGRG00001016089) #11 Aox3 (ENSCGRG00001016559) #11 Aox1 (ENSCGRG00001018485) #12 ENSCGRG00001016045 #13 Kctd18 (ENSCGRG00001016666) #14 Spats2l (ENSCGRG00001019123) #15 Maip1 (ENSCGRG00001018639) #18 Tyw5 (ENSCGRG00001015297) #19 1700066M21Rik (ENSCGRG00001016585) #20 Satb2 (ENSCGRG00001019669) #22 Hsfy2 (ENSCGRG00001009926) ENSCGRG00001010393 Plcl1 (ENSCGRG00001015676) #24 ENSCGRG00001009537 Boll (ENSCGRG00001020168) #25 Mars2 (ENSCGRG00001010364) #26 Rftn2 (ENSCGRG00001017788) #27 Mob4 (ENSCGRG00001024203) #28 ENSCGRG00001015345 ##29 HSPD1 (ENSCGRG00001021126) #30 Coq10b (ENSCGRG00001015271) #31 Sf3b1 (ENSCGRG00001016990) #32 Ankrd44 (ENSCGRG00001018584) #34 Pgap1 (ENSCGRG00001016707) #35 Gtf3c3 (ENSCGRG00001014543) #36 Golden Hamster MODERN SPECIES 723 Aox1 (ENSMAUG00000014270) #12 ENSMAUG00000000248 #13 Kctd18 (ENSMAUG00000019856) #14 Spats2l (ENSMAUG00000016921) #15 Maip1 (ENSMAUG00000007424) #18 Tyw5 (ENSMAUG00000009449) #19 1700066M21Rik (ENSMAUG00000017438) #20 Satb2 (ENSMAUG00000008545) #22 Plcl1 (ENSMAUG00000003415) #24 Boll (ENSMAUG00000008224) #25 Mars2 (ENSMAUG00000017224) #26 Rftn2 (ENSMAUG00000014348) #27 ENSMAUG00000007042 #28 ENSMAUG00000017789 #30 Coq10b (ENSMAUG00000010644) #31 Sf3b1 (ENSMAUG00000009071) #32 Ankrd44 (ENSMAUG00000019633) #34 Pgap1 (ENSMAUG00000018155) #35 Gtf3c3 (ENSMAUG00000018770) #36 Ccdc150 (ENSMAUG00000015624) Hecw2 (ENSMAUG00000011882) #37 Stk17b (ENSMAUG00000018862) ENSMAUG00000020218 Cricetidae_B ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000157452 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT00390000006350.m.a.c.a.`b #29 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a.ab #29 ENSGT00390000005727.a.b.b.w.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000016929 #36 Prairie vole MODERN SPECIES 91 Hycc2 (ENSMOCG00000012367) Orc2 (ENSMOCG00000016158) Nif3l1 (ENSMOCG00000012327) ENSMOCG00000013096 ENSMOCG00000005608 #8 Bzw1 (ENSMOCG00000008375) #9 Aox2 (ENSMOCG00000018237) #10 Aox4 (ENSMOCG00000015766) #11 Aox1 (ENSMOCG00000001195) #12 ENSMOCG00000012099 #13 Kctd18 (ENSMOCG00000018835) #14 Spats2l (ENSMOCG00000006136) #15 Maip1 (ENSMOCG00000008182) #18 Tyw5 (ENSMOCG00000018540) #19 1700066M21Rik (ENSMOCG00000018970) #20 ENSMOCG00000005756 #22 Hsfy2 (ENSMOCG00000013974) Plcl1 (ENSMOCG00000014862) #24 Boll (ENSMOCG00000022824) #25 Mars2 (ENSMOCG00000006676) #26 Rftn2 (ENSMOCG00000020060) #27 ENSMOCG00000000253 #29 Mob4 (ENSMOCG00000020652) #28 ENSMOCG00000002787 #30 Coq10b (ENSMOCG00000012636) #31 Sf3b1 (ENSMOCG00000000455) #32 ENSMOCG00000021330 #34 Pgap1 (ENSMOCG00000013936) #35 Gtf3c3 (ENSMOCG00000019654) #36 Ccdc150 (ENSMOCG00000001399) Hecw2 (ENSMOCG00000012140) #37 Northern American deer mouse MODERN SPECIES 4 Hycc2 (ENSPEMG00000014604) Orc2 (ENSPEMG00000010035) Nif3l1 (ENSPEMG00000023040) Ppil3 (ENSPEMG00000011585) Clk1 (ENSPEMG00000022508) #8 ENSPEMG00000013940 #9 Aox2 (ENSPEMG00000022861) #10 ENSPEMG00000027085 #11 Aox1 (ENSPEMG00000000656) #12 ENSPEMG00000020091 #13 Kctd18 (ENSPEMG00000028635) #14 Spats2l (ENSPEMG00000020003) #15 Maip1 (ENSPEMG00000015287) #18 Tyw5 (ENSPEMG00000009506) #19 1700066M21Rik (ENSPEMG00000001657) #20 Satb2 (ENSPEMG00000013811) #22 Hsfy2 (ENSPEMG00000029057) Plcl1 (ENSPEMG00000001849) #24 ENSPEMG00000024520 Boll (ENSPEMG00000018168) #25 Mars2 (ENSPEMG00000008377) #26 Rftn2 (ENSPEMG00000000048) #27 Mob4 (ENSPEMG00000017361) #28 ENSPEMG00000029712 ENSPEMG00000010504 #29 Hspd1 (ENSPEMG00000015411) #30 Coq10b (ENSPEMG00000005817) #31 Sf3b1 (ENSPEMG00000010699) #32 Ankrd44 (ENSPEMG00000016873) #34 Pgap1 (ENSPEMG00000008939) #35 ENSPEMG00000024521 Kangaroo rat MODERN SPECIES 320 ENSDORG00000024018 Hycc2 (ENSDORG00000029531) Orc2 (ENSDORG00000007391) Nif3l1 (ENSDORG00000007390) Ppil3 (ENSDORG00000007389) Clk1 (ENSDORG00000007388) #8 Bzw1 (ENSDORG00000029865) #9 Aox2 (ENSDORG00000026718) #10 Aox4 (ENSDORG00000026668) #11 Aox3 (ENSDORG00000025305) #11 Aox1 (ENSDORG00000004358) #12 Kctd18 (ENSDORG00000007817) #14 Spats2l (ENSDORG00000007816) #15 Maip1 (ENSDORG00000012569) #18 Tyw5 (ENSDORG00000012567) #19 Satb2 (ENSDORG00000001292) #22 Plcl1 (ENSDORG00000000485) #24 Boll (ENSDORG00000010791) #25 Mars2 (ENSDORG00000010789) #26 Rftn2 (ENSDORG00000008999) #27 Mob4 (ENSDORG00000023241) #28 ENSDORG00000011071 ##29 Hspd1 (ENSDORG00000011069) ##30 Coq10b (ENSDORG00000025804) #31 Sf3b1 (ENSDORG00000002399) #32 ENSDORG00000029693 #34 ENSDORG00000024945 Pgap1 (ENSDORG00000000406) #35 Gtf3c3 (ENSDORG00000000403) #36 Hecw2 (ENSDORG00000014759) #37 Stk17b (ENSDORG00000029601) Rodentia_A ANCESTRAL SPECIES 13 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00390000006350.m.a.c.b.b ##29 ENSGT00390000005727.a.b.a.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Sciuridae ANCESTRAL SPECIES 10 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00390000005727.a.b.a.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 Marmotini ANCESTRAL SPECIES 2 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b.v #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000012178.g.a.a ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a.v #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 #37 Marmotini_b ANCESTRAL SPECIES 91 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000012178.g.a.a ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a.v #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 #37 Squirrel MODERN SPECIES 106 SATB2 (ENSSTOG00000024964) #22 PLCL1 (ENSSTOG00000026164) #24 BOLL (ENSSTOG00000003536) #25 MARS2 (ENSSTOG00000015451) #26 RFTN2 (ENSSTOG00000015446) #27 MOB4 (ENSSTOG00000021024) #28 ENSSTOG00000031333 #29 ENSSTOG00000028470 #30 COQ10B (ENSSTOG00000011048) #31 SF3B1 (ENSSTOG00000011034) #32 ANKRD44 (ENSSTOG00000012130) #34 PGAP1 (ENSSTOG00000010633) #35 GTF3C3 (ENSSTOG00000011894) #36 ENSSTOG00000014552 HECW2 (ENSSTOG00000015188) #37 STK17B (ENSSTOG00000020599) Arctic ground squirrel MODERN SPECIES 210 ENSUPAG00010015923 #11 AOX1 (ENSUPAG00010015861) #12 SGO2 (ENSUPAG00010015843) #13 KCTD18 (ENSUPAG00010015819) #14 SPATS2L (ENSUPAG00010015777) #15 MAIP1 (ENSUPAG00010015760) #18 TYW5 (ENSUPAG00010015739) #19 C2orf69 (ENSUPAG00010015730) #20 FTCDNL1 (ENSUPAG00010015721) ENSUPAG00010015718 SATB2 (ENSUPAG00010015643) #22 PLCL1 (ENSUPAG00010015612) #24 BOLL (ENSUPAG00010015589) #25 MARS2 (ENSUPAG00010015585) #26 RFTN2 (ENSUPAG00010015580) #27 ENSUPAG00010015569 ##29 ENSUPAG00010015563 ##30 COQ10B (ENSUPAG00010015540) #31 SF3B1 (ENSUPAG00010015518) #32 Alpin marmot MODERN SPECIES 8 PPIL3 (ENSMMMG00000012069) CLK1 (ENSMMMG00000012051) #8 ENSMMMG00000012026 #9 ENSMMMG00000011976 #10 ENSMMMG00000011959 ##21 ENSMMMG00000011912 #11 AOX1 (ENSMMMG00000011886) #12 ENSMMMG00000011877 #13 KCTD18 (ENSMMMG00000011839) #14 SPATS2L (ENSMMMG00000011689) #15 MAIP1 (ENSMMMG00000011679) #18 TYW5 (ENSMMMG00000011668) #19 C2orf69 (ENSMMMG00000011660) #20 FTCDNL1 (ENSMMMG00000011655) ENSMMMG00000011650 SATB2 (ENSMMMG00000011551) #22 ENSMMMG00000011481 PLCL1 (ENSMMMG00000011429) #24 BOLL (ENSMMMG00000011354) #25 MARS2 (ENSMMMG00000011347) #26 RFTN2 (ENSMMMG00000011220) #27 ENSMMMG00000011174 #28 ENSMMMG00000011161 #29 ENSMMMG00000011138 ##30 ENSMMMG00000011101 #31 SF3B1 (ENSMMMG00000011081) #32 ANKRD44 (ENSMMMG00000010980) #34 PGAP1 (ENSMMMG00000010912) #35 GTF3C3 (ENSMMMG00000010874) #36 ENSMMMG00000010858 ENSMMMG00000010842 Eurasian red squirrel MODERN SPECIES 12 NIF3L1 (ENSSVLG00005004091) PPIL3 (ENSSVLG00005004070) CLK1 (ENSSVLG00005004020) #8 BZW1 (ENSSVLG00005003945) #9 ENSSVLG00005003845 #10 ENSSVLG00005003767 #11 AOX1 (ENSSVLG00005003683) #12 SGO2 (ENSSVLG00005003633) #13 ENSSVLG00005003604 #14 SPATS2L (ENSSVLG00005003512) #15 MAIP1 (ENSSVLG00005003433) #18 TYW5 (ENSSVLG00005003405) #19 C2orf69 (ENSSVLG00005003387) #20 FTCDNL1 (ENSSVLG00005003343) ENSSVLG00005003317 SATB2 (ENSSVLG00005003278) #22 PLCL1 (ENSSVLG00005003227) #24 ENSSVLG00005003207 BOLL (ENSSVLG00005003123) #25 MARS2 (ENSSVLG00005003085) #26 RFTN2 (ENSSVLG00005003057) #27 MOB4 (ENSSVLG00005002989) #28 HSPE1 (ENSSVLG00005002940) #29 ENSSVLG00005002895 ##30 ENSSVLG00005002862 #31 SF3B1 (ENSSVLG00005002801) #32 ANKRD44 (ENSSVLG00005002705) #34 PGAP1 (ENSSVLG00005002564) #35 C2orf66 (ENSSVLG00005002524) ENSSVLG00005002519 GTF3C3 (ENSSVLG00005002487) #36 Hystricomorpha ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.b.b ##29 ENSGT00390000005727.a.b.a.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 #37 Hystricomorpha_a ANCESTRAL SPECIES 17 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.b.b ##29 ENSGT00390000005727.a.b.a.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 ENSGT00940000155466 #37 Hystricomorpha_b ANCESTRAL SPECIES 24 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.b.b.a.b ##29 ENSGT00390000005727.a.b.a.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 ENSGT00940000154014.b.b Degu MODERN SPECIES 66 ENSODEG00000007860 ORC2 (ENSODEG00000008853) NIF3L1 (ENSODEG00000008894) PPIL3 (ENSODEG00000007592) CLK1 (ENSODEG00000009021) #8 ENSODEG00000019563 ENSODEG00000008411 #9 ENSODEG00000008135 #10 ENSODEG00000011138 #11 AOX1 (ENSODEG00000012914) #12 ENSODEG00000009211 #14 SPATS2L (ENSODEG00000009851) #15 MAIP1 (ENSODEG00000008914) #18 TYW5 (ENSODEG00000009836) #19 C2orf69 (ENSODEG00000008700) #20 SATB2 (ENSODEG00000008383) #22 PLCL1 (ENSODEG00000008918) #24 BOLL (ENSODEG00000008471) #25 RFTN2 (ENSODEG00000008704) #27 MOB4 (ENSODEG00000009609) #28 ENSODEG00000019874 ENSODEG00000011397 ##29 ENSODEG00000009026 ##30 COQ10B (ENSODEG00000008396) #31 ENSODEG00000011153 #32 ENSODEG00000019820 ENSODEG00000008898 #34 ENSODEG00000008698 ENSODEG00000009525 PGAP1 (ENSODEG00000009932) #35 ENSODEG00000009843 #36 Long-tailed chinchilla MODERN SPECIES 110 HYCC2 (ENSCLAG00000011177) ORC2 (ENSCLAG00000013209) NIF3L1 (ENSCLAG00000013524) PPIL3 (ENSCLAG00000014050) CLK1 (ENSCLAG00000011455) #8 BZW1 (ENSCLAG00000012079) #9 ENSCLAG00000011199 #10 ENSCLAG00000014402 #11 AOX1 (ENSCLAG00000011481) #12 ENSCLAG00000012456 #13 ENSCLAG00000014377 #14 SPATS2L (ENSCLAG00000013167) #15 MAIP1 (ENSCLAG00000011913) #18 TYW5 (ENSCLAG00000012009) #19 C2orf69 (ENSCLAG00000012813) #20 SATB2 (ENSCLAG00000016994) #22 PLCL1 (ENSCLAG00000016098) #24 BOLL (ENSCLAG00000017375) #25 MARS2 (ENSCLAG00000010386) #26 RFTN2 (ENSCLAG00000009821) #27 MOB4 (ENSCLAG00000010086) #28 ENSCLAG00000010686 ##29 HSPD1 (ENSCLAG00000011541) ##30 COQ10B (ENSCLAG00000017377) #31 SF3B1 (ENSCLAG00000014767) #32 ANKRD44 (ENSCLAG00000015396) #34 PGAP1 (ENSCLAG00000011838) #35 GTF3C3 (ENSCLAG00000009827) #36 CCDC150 (ENSCLAG00000012365) HECW2 (ENSCLAG00000011628) #37 STK17B (ENSCLAG00000012520) Guinea pig MODERN SPECIES 104 HYCC2 (ENSCPOG00000010108) ORC2 (ENSCPOG00000004552) NIF3L1 (ENSCPOG00000008572) PPIL3 (ENSCPOG00000008570) CLK1 (ENSCPOG00000027067) #8 ENSCPOG00000010449 #9 ENSCPOG00000019962 #10 ENSCPOG00000033032 #11 Aox1 (ENSCPOG00000025955) #12 ENSCPOG00000002722 #13 ENSCPOG00000012077 #14 SPATS2L (ENSCPOG00000003190) #15 MAIP1 (ENSCPOG00000003800) #18 TYW5 (ENSCPOG00000035856) #19 C2orf69 (ENSCPOG00000009934) #20 SATB2 (ENSCPOG00000015198) #22 PLCL1 (ENSCPOG00000011478) #24 BOLL (ENSCPOG00000000390) #25 MARS2 (ENSCPOG00000025973) #26 RFTN2 (ENSCPOG00000010463) #27 MOB4 (ENSCPOG00000012746) #28 ENSCPOG00000027474 ##29 HSPD1 (ENSCPOG00000002588) ##30 COQ10B (ENSCPOG00000002673) #31 SF3B1 (ENSCPOG00000009353) #32 ANKRD44 (ENSCPOG00000026494) #34 PGAP1 (ENSCPOG00000003177) #35 GTF3C3 (ENSCPOG00000006643) #36 CCDC150 (ENSCPOG00000031267) ENSCPOG00000040067 HECW2 (ENSCPOG00000008908) #37 Naked mole-rat female MODERN SPECIES 22 PPIL3 (ENSHGLG00000035729) Clk1 (ENSHGLG00000011322) #8 BZW1 (ENSHGLG00000011961) #9 ENSHGLG00000012205 #10 Aox4 (ENSHGLG00000012471) #11 AOX1 (ENSHGLG00000012876) #12 SGO2 (ENSHGLG00000015359) #13 ENSHGLG00000047532 ENSHGLG00000015370 #14 SPATS2L (ENSHGLG00000015420) #15 ENSHGLG00000017615 MAIP1 (ENSHGLG00000017548) #18 TYW5 (ENSHGLG00000017557) #19 C2orf69 (ENSHGLG00000040936) #20 ENSHGLG00000020697 SATB2 (ENSHGLG00000015892) #22 ENSHGLG00000043283 PLCL1 (ENSHGLG00000015970) #24 BOLL (ENSHGLG00000017562) #25 MARS2 (ENSHGLG00000049320) #26 RFTN2 (ENSHGLG00000017636) #27 MOB4 (ENSHGLG00000050196) #28 ENSHGLG00000042669 ##29 HSPD1 (ENSHGLG00000007927) ##30 ENSHGLG00000038699 #31 ENSHGLG00000008285 #32 ANKRD44 (ENSHGLG00000008625) #34 ENSHGLG00000049153 ENSHGLG00000040344 ENSHGLG00000008965 #35 ENSHGLG00000042696 Lagomorpha ANCESTRAL SPECIES 13 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.a.b ##30 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Rabbit MODERN SPECIES 18 PPIL3 (ENSOCUG00000010661) CLK1 (ENSOCUG00000010653) #8 ENSOCUG00000010647 #9 ENSOCUG00000026480 #10 ENSOCUG00000024593 #11 ENSOCUG00000035654 #11 AOX1 (ENSOCUG00000013971) #12 ENSOCUG00000000547 #13 ENSOCUG00000037416 #13 KCTD18 (ENSOCUG00000011556) #14 SPATS2L (ENSOCUG00000011549) #15 ENSOCUG00000017946 #18 ENSOCUG00000035705 #19 ENSOCUG00000016464 #19 C2orf69 (ENSOCUG00000016473) #20 SATB2 (ENSOCUG00000009700) #22 PLCL1 (ENSOCUG00000013978) #24 BOLL (ENSOCUG00000013979) #25 MARS2 (ENSOCUG00000017798) #26 RFTN2 (ENSOCUG00000003993) #27 ENSOCUG00000005712 #28 HSPE1 (ENSOCUG00000010360) #29 HSPD1 (ENSOCUG00000012736) ##30 COQ10B (ENSOCUG00000012735) #31 ENSOCUG00000000205 ENSOCUG00000029492 #32 ENSOCUG00000012722 #32 ANKRD44 (ENSOCUG00000009183) #34 PGAP1 (ENSOCUG00000002192) #35 C2orf66 (ENSOCUG00000028999) GTF3C3 (ENSOCUG00000000463) #36 Pika MODERN SPECIES 573 MAIP1 (ENSOPRG00000004142) #18 TYW5 (ENSOPRG00000004133) #19 C2orf69 (ENSOPRG00000004115) #20 SATB2 (ENSOPRG00000003979) #22 Tree shrew MODERN SPECIES 795 SATB2 (ENSTBEG00000002443) #22 Primates ANCESTRAL SPECIES 13 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.b ##29 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.a.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Haplorrhini ANCESTRAL SPECIES 10 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.a.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 Simiiformes ANCESTRAL SPECIES 15 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.a.c.a.mb #29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 Catarrhini ANCESTRAL SPECIES 16 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb #29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 Hominoidea ANCESTRAL SPECIES 15 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb.a.a #29 ENSGT00390000005727.a.b.a.b.c.b.a ##30 ENSGT00390000006350.m.a.c.a.mb.b #29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Hominidae ANCESTRAL SPECIES 17 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb.a.a #29 ENSGT00390000005727.a.b.a.b.c.b.a ##30 ENSGT00390000006350.m.a.c.a.mb.b #29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb.a.a #29 ENSGT00390000006350.m.a.c.a.mb.b #29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000157455.i.b ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Gorilla MODERN SPECIES 15 HYCC2 (ENSGGOG00000039554) ORC2 (ENSGGOG00000014070) NIF3L1 (ENSGGOG00000014060) PPIL3 (ENSGGOG00000022268) CLK1 (ENSGGOG00000016192) #8 BZW1 (ENSGGOG00000016296) #9 AOX1 (ENSGGOG00000006140) #12 SGO2 (ENSGGOG00000038921) #13 KCTD18 (ENSGGOG00000014079) #14 SPATS2L (ENSGGOG00000005917) #15 MAIP1 (ENSGGOG00000005661) #18 TYW5 (ENSGGOG00000041719) #19 C2orf69 (ENSGGOG00000005649) #20 FTCDNL1 (ENSGGOG00000040488) ENSGGOG00000044011 SATB2 (ENSGGOG00000014123) #22 PLCL1 (ENSGGOG00000001959) #24 BOLL (ENSGGOG00000013594) #25 MARS2 (ENSGGOG00000034895) #26 RFTN2 (ENSGGOG00000009318) #27 MOB4 (ENSGGOG00000036779) ##28 HSPE1 (ENSGGOG00000027944) #29 HSPD1 (ENSGGOG00000008267) ##30 COQ10B (ENSGGOG00000039158) #31 SF3B1 (ENSGGOG00000009264) #32 ENSGGOG00000038007 ANKRD44 (ENSGGOG00000014558) #34 PGAP1 (ENSGGOG00000001785) #35 C2orf66 (ENSGGOG00000038009) GTF3C3 (ENSGGOG00000011787) #36 CCDC150 (ENSGGOG00000010004) Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb.a.a #29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000157455.i.b ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Human MODERN SPECIES 11 NDUFB3 (ENSG00000119013) HYCC2 (ENSG00000155744) ORC2 (ENSG00000115942) NIF3L1 (ENSG00000196290) PPIL3 (ENSG00000240344) CLK1 (ENSG00000013441) #8 BZW1 (ENSG00000082153) #9 AOX1 (ENSG00000138356) #12 SGO2 (ENSG00000163535) #13 KCTD18 (ENSG00000155729) #14 SPATS2L (ENSG00000196141) #15 MAIP1 (ENSG00000162972) #18 TYW5 (ENSG00000162971) #19 C2orf69 (ENSG00000178074) #20 FTCDNL1 (ENSG00000226124) SATB2 (ENSG00000119042) #22 PLCL1 (ENSG00000115896) #24 BOLL (ENSG00000152430) #25 MARS2 (ENSG00000247626) #26 RFTN2 (ENSG00000162944) #27 MOB4 (ENSG00000115540) ##28 HSPE1-MOB4 (ENSG00000270757) HSPE1 (ENSG00000115541) #29 HSPD1 (ENSG00000144381) ##30 COQ10B (ENSG00000115520) #31 SF3B1 (ENSG00000115524) #32 ANKRD44 (ENSG00000065413) #34 PGAP1 (ENSG00000197121) #35 C2orf66 (ENSG00000187944) GTF3C3 (ENSG00000119041) #36 CCDC150 (ENSG00000144395) Pan ANCESTRAL SPECIES 12 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb.a.a #29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000157455.i.b ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Chimpanzee MODERN SPECIES 15 ORC2 (ENSPTRG00000012795) NIF3L1 (ENSPTRG00000012794) PPIL3 (ENSPTRG00000012793) CLK1 (ENSPTRG00000012792) #8 BZW1 (ENSPTRG00000012791) #9 ENSPTRG00000044647 #10 AOX1 (ENSPTRG00000012790) #12 SGO2 (ENSPTRG00000022953) #13 KCTD18 (ENSPTRG00000012787) #14 SPATS2L (ENSPTRG00000012785) #15 MAIP1 (ENSPTRG00000012784) #18 TYW5 (ENSPTRG00000012783) #19 C2orf69 (ENSPTRG00000012782) #20 FTCDNL1 (ENSPTRG00000047502) ENSPTRG00000050460 SATB2 (ENSPTRG00000012779) #22 PLCL1 (ENSPTRG00000012778) #24 BOLL (ENSPTRG00000012777) #25 MARS2 (ENSPTRG00000047853) #26 RFTN2 (ENSPTRG00000012776) #27 MOB4 (ENSPTRG00000012775) ##28 HSPE1 (ENSPTRG00000012774) #29 HSPD1 (ENSPTRG00000044665) ##30 COQ10B (ENSPTRG00000012772) #31 SF3B1 (ENSPTRG00000012771) #32 ENSPTRG00000049270 ANKRD44 (ENSPTRG00000012770) #34 PGAP1 (ENSPTRG00000012769) #35 C2BH2orf66 (ENSPTRG00000012768) GTF3C3 (ENSPTRG00000012767) #36 CCDC150 (ENSPTRG00000012765) Bonobo MODERN SPECIES 15 ORC2 (ENSPPAG00000030211) NIF3L1 (ENSPPAG00000043491) PPIL3 (ENSPPAG00000039183) CLK1 (ENSPPAG00000036957) #8 BZW1 (ENSPPAG00000027971) #9 ENSPPAG00000030893 #10 AOX1 (ENSPPAG00000000241) #12 SGO2 (ENSPPAG00000000061) #13 KCTD18 (ENSPPAG00000038865) #14 SPATS2L (ENSPPAG00000036160) #15 MAIP1 (ENSPPAG00000026692) #18 TYW5 (ENSPPAG00000027150) #19 C2orf69 (ENSPPAG00000035529) #20 FTCDNL1 (ENSPPAG00000020283) ENSPPAG00000039843 SATB2 (ENSPPAG00000044026) #22 PLCL1 (ENSPPAG00000042453) #24 BOLL (ENSPPAG00000033757) #25 MARS2 (ENSPPAG00000007220) #26 RFTN2 (ENSPPAG00000026815) #27 MOB4 (ENSPPAG00000044023) ##28 ENSPPAG00000023895 ##29 HSPD1 (ENSPPAG00000038858) ##30 COQ10B (ENSPPAG00000010452) #31 SF3B1 (ENSPPAG00000035007) #32 ENSPPAG00000043776 ENSPPAG00000042224 ANKRD44 (ENSPPAG00000033556) #34 PGAP1 (ENSPPAG00000039254) #35 C2orf66 (ENSPPAG00000029492) GTF3C3 (ENSPPAG00000002745) #36 Orangutan MODERN SPECIES 15 NDUFB3 (ENSPPYG00000013065) HYCC2 (ENSPPYG00000029836) ORC2 (ENSPPYG00000013064) NIF3L1 (ENSPPYG00000013063) ENSPPYG00000013062 #7 CLK1 (ENSPPYG00000013061) #8 BZW1 (ENSPPYG00000035986) #9 AOX1 (ENSPPYG00000013058) #12 SGO2 (ENSPPYG00000013057) #13 KCTD18 (ENSPPYG00000030650) #14 SPATS2L (ENSPPYG00000013055) #15 MAIP1 (ENSPPYG00000035692) #18 TYW5 (ENSPPYG00000033416) #19 C2orf69 (ENSPPYG00000013054) #20 FTCDNL1 (ENSPPYG00000033061) SATB2 (ENSPPYG00000013052) #22 PLCL1 (ENSPPYG00000039108) #24 BOLL (ENSPPYG00000037688) #25 MARS2 (ENSPPYG00000013049) #26 ENSPPYG00000041557 RFTN2 (ENSPPYG00000013048) #27 MOB4 (ENSPPYG00000013047) ##28 HSPE1 (ENSPPYG00000025876) #29 HSPD1 (ENSPPYG00000013046) ##30 COQ10B (ENSPPYG00000039065) #31 SF3B1 (ENSPPYG00000013044) #32 ANKRD44 (ENSPPYG00000013043) #34 PGAP1 (ENSPPYG00000013042) #35 C2orf66 (ENSPPYG00000037735) GTF3C3 (ENSPPYG00000013040) #36 CCDC150 (ENSPPYG00000013039) Gibbon MODERN SPECIES 14 HYCC2 (ENSNLEG00000006941) ORC2 (ENSNLEG00000006938) NIF3L1 (ENSNLEG00000006935) PPIL3 (ENSNLEG00000034236) CLK1 (ENSNLEG00000032526) #8 BZW1 (ENSNLEG00000006929) #9 ENSNLEG00000029066 #10 AOX1 (ENSNLEG00000006920) #12 SGO2 (ENSNLEG00000006913) #13 KCTD18 (ENSNLEG00000006912) #14 SPATS2L (ENSNLEG00000006905) #15 MAIP1 (ENSNLEG00000029234) #18 TYW5 (ENSNLEG00000031551) #19 C2orf69 (ENSNLEG00000031645) #20 FTCDNL1 (ENSNLEG00000029410) SATB2 (ENSNLEG00000006893) #22 PLCL1 (ENSNLEG00000006890) #24 BOLL (ENSNLEG00000006885) #25 MARS2 (ENSNLEG00000018752) #26 RFTN2 (ENSNLEG00000006883) #27 MOB4 (ENSNLEG00000006881) ##28 ENSNLEG00000030370 ##29 ENSNLEG00000006874 ##30 ENSNLEG00000029205 COQ10B (ENSNLEG00000006871) #31 SF3B1 (ENSNLEG00000006861) #32 ANKRD44 (ENSNLEG00000006855) #34 PGAP1 (ENSNLEG00000006849) #35 C2orf66 (ENSNLEG00000006848) GTF3C3 (ENSNLEG00000006837) #36 ENSNLEG00000006833 Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00950000183743 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b ##29 ENSGT00390000006350.m.a.c.a.mb #29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #34 ENSGT00390000016484 #35 Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00950000183743 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 Vervet Monkey MODERN SPECIES 1 HYCC2 (ENSCSAG00000010815) ORC2 (ENSCSAG00000010834) NIF3L1 (ENSCSAG00000010842) PPIL3 (ENSCSAG00000010852) CLK1 (ENSCSAG00000010924) #8 BZW1 (ENSCSAG00000010957) #9 ENSCSAG00000011187 #10 AOX1 (ENSCSAG00000011276) #12 SGO2 (ENSCSAG00000011303) #13 KCTD18 (ENSCSAG00000011318) #14 SPATS2L (ENSCSAG00000011326) #15 MAIP1 (ENSCSAG00000011334) #18 TYW5 (ENSCSAG00000011351) #19 C2orf69 (ENSCSAG00000011358) #20 FTCDNL1 (ENSCSAG00000011372) SATB2 (ENSCSAG00000011380) #22 PLCL1 (ENSCSAG00000011391) #24 BOLL (ENSCSAG00000011399) #25 MARS2 (ENSCSAG00000018765) #26 RFTN2 (ENSCSAG00000011411) #27 MOB4 (ENSCSAG00000011421) ##28 ENSCSAG00000011427 ##29 HSPD1 (ENSCSAG00000011463) ##30 COQ10B (ENSCSAG00000011483) #31 SF3B1 (ENSCSAG00000011505) #32 ENSCSAG00000011517 ANKRD44 (ENSCSAG00000011536) #34 PGAP1 (ENSCSAG00000011561) #35 C2orf66 (ENSCSAG00000011573) GTF3C3 (ENSCSAG00000011582) #36 CCDC150 (ENSCSAG00000011637) Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00950000183743 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 Macaca ANCESTRAL SPECIES 15 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #34 ENSGT00390000016484 #35 Pig-tailed macaque MODERN SPECIES 409 NIF3L1 (ENSMNEG00000040987) PPIL3 (ENSMNEG00000032202) CLK1 (ENSMNEG00000031266) #8 BZW1 (ENSMNEG00000043638) #9 ENSMNEG00000045434 #10 ENSMNEG00000034841 #11 AOX1 (ENSMNEG00000024714) #12 SGO2 (ENSMNEG00000035682) #13 KCTD18 (ENSMNEG00000038609) #14 SPATS2L (ENSMNEG00000016309) #15 MAIP1 (ENSMNEG00000028494) #18 TYW5 (ENSMNEG00000030303) #19 C2orf69 (ENSMNEG00000035266) #20 FTCDNL1 (ENSMNEG00000037918) ENSMNEG00000040066 SATB2 (ENSMNEG00000043012) #22 PLCL1 (ENSMNEG00000019208) #24 BOLL (ENSMNEG00000033015) #25 MARS2 (ENSMNEG00000019593) #26 RFTN2 (ENSMNEG00000033769) #27 ENSMNEG00000033689 MOB4 (ENSMNEG00000033188) ##28 ENSMNEG00000039279 ##29 ENSMNEG00000043358 COQ10B (ENSMNEG00000032409) #31 SF3B1 (ENSMNEG00000042333) #32 ENSMNEG00000036998 ANKRD44 (ENSMNEG00000043273) #34 ENSMNEG00000045145 PGAP1 (ENSMNEG00000033082) #35 C2orf66 (ENSMNEG00000038376) Macaca_a ANCESTRAL SPECIES 17 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.d #28 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a.e ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 Crab-eating macaque MODERN SPECIES 3 HYCC2 (ENSMFAG00000032144) ORC2 (ENSMFAG00000040620) NIF3L1 (ENSMFAG00000003012) PPIL3 (ENSMFAG00000038708) CLK1 (ENSMFAG00000030719) #8 BZW1 (ENSMFAG00000020809) #9 ENSMFAG00000034555 #10 AOX1 (ENSMFAG00000036889) #12 SGO2 (ENSMFAG00000041855) #13 KCTD18 (ENSMFAG00000037300) #14 SPATS2L (ENSMFAG00000003450) #15 MAIP1 (ENSMFAG00000045074) #18 TYW5 (ENSMFAG00000004016) #19 C2orf69 (ENSMFAG00000032268) #20 ENSMFAG00000038094 SATB2 (ENSMFAG00000035983) #22 PLCL1 (ENSMFAG00000038838) #24 BOLL (ENSMFAG00000030962) #25 MARS2 (ENSMFAG00000012275) #26 ENSMFAG00000003051 RFTN2 (ENSMFAG00000003082) #27 ENSMFAG00000035530 ##28 ENSMFAG00000045023 ##29 ENSMFAG00000033000 ##30 COQ10B (ENSMFAG00000017910) #31 ENSMFAG00000045829 SF3B1 (ENSMFAG00000036680) #32 ENSMFAG00000057968 ENSMFAG00000057322 ANKRD44 (ENSMFAG00000032694) #34 PGAP1 (ENSMFAG00000029122) #35 Rhesus MODERN SPECIES 3 ORC2 (ENSMMUG00000014460) NIF3L1 (ENSMMUG00000006639) PPIL3 (ENSMMUG00000006638) #7 CLK1 (ENSMMUG00000006640) #8 BZW1 (ENSMMUG00000022202) #9 AOX2 (ENSMMUG00000005835) #10 AOX4 (ENSMMUG00000047974) #11 AOX1 (ENSMMUG00000021931) #12 SGO2 (ENSMMUG00000052913) #13 KCTD18 (ENSMMUG00000008102) #14 SPATS2L (ENSMMUG00000008101) #15 MAIP1 (ENSMMUG00000023168) #18 TYW5 (ENSMMUG00000023167) #19 C12H2orf69 (ENSMMUG00000041535) #20 FTCDNL1 (ENSMMUG00000031310) SATB2 (ENSMMUG00000046254) #22 ENSMMUG00000059853 PLCL1 (ENSMMUG00000012822) #24 BOLL (ENSMMUG00000023811) #25 MARS2 (ENSMMUG00000023810) #26 RFTN2 (ENSMMUG00000023809) #27 HSPE1 (ENSMMUG00000016547) #28 HSPD1 (ENSMMUG00000010489) ##30 COQ10B (ENSMMUG00000056418) #31 ENSMMUG00000058328 SF3B1 (ENSMMUG00000022430) #32 ANKRD44 (ENSMMUG00000022425) #34 PGAP1 (ENSMMUG00000043369) #35 C2H2orf66 (ENSMMUG00000054516) GTF3C3 (ENSMMUG00000008643) #36 CCDC150 (ENSMMUG00000015970) Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00950000183743 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00940000157455.i.b ENSGT00950000182908.D #34 ENSGT00390000016484 #35 Olive baboon MODERN SPECIES 1 ORC2 (ENSPANG00000034347) NIF3L1 (ENSPANG00000025493) ENSPANG00000009683 #7 CLK1 (ENSPANG00000015580) #8 BZW1 (ENSPANG00000016459) #9 AOX2 (ENSPANG00000016460) #10 AOX4 (ENSPANG00000024540) #11 AOX1 (ENSPANG00000015933) #12 SGO2 (ENSPANG00000021922) #13 KCTD18 (ENSPANG00000021439) #14 SPATS2L (ENSPANG00000008482) #15 TYW5 (ENSPANG00000009235) #19 C2orf69 (ENSPANG00000040521) #20 ENSPANG00000044612 ENSPANG00000031615 SATB2 (ENSPANG00000011212) #22 ENSPANG00000050725 PLCL1 (ENSPANG00000000848) #24 BOLL (ENSPANG00000009570) #25 ENSPANG00000042310 MARS2 (ENSPANG00000016544) #26 RFTN2 (ENSPANG00000009899) #27 MOB4 (ENSPANG00000016215) ##28 ENSPANG00000046137 ##29 ENSPANG00000029555 ##30 COQ10B (ENSPANG00000006879) #31 ENSPANG00000037062 SF3B1 (ENSPANG00000013417) #32 ENSPANG00000016748 ENSPANG00000037191 ENSPANG00000048684 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00950000183743 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.b.a.b.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00940000157455.i.b ENSGT00950000182908.D #34 ENSGT00390000016484 #35 Drill MODERN SPECIES 457 PPIL3 (ENSMLEG00000039054) CLK1 (ENSMLEG00000029735) #8 BZW1 (ENSMLEG00000018894) #9 ENSMLEG00000016360 #10 ENSMLEG00000013006 #11 AOX1 (ENSMLEG00000039204) #12 SGO2 (ENSMLEG00000039520) #13 KCTD18 (ENSMLEG00000042319) #14 SPATS2L (ENSMLEG00000037145) #15 ENSMLEG00000036074 MAIP1 (ENSMLEG00000041626) #18 TYW5 (ENSMLEG00000038351) #19 C2orf69 (ENSMLEG00000015699) #20 FTCDNL1 (ENSMLEG00000042066) ENSMLEG00000042892 SATB2 (ENSMLEG00000037435) #22 PLCL1 (ENSMLEG00000042517) #24 Sooty mangabey MODERN SPECIES 570 NIF3L1 (ENSCATG00000030966) PPIL3 (ENSCATG00000031187) CLK1 (ENSCATG00000030802) #8 BZW1 (ENSCATG00000032512) #9 ENSCATG00000019918 #10 ENSCATG00000042053 #11 AOX1 (ENSCATG00000033826) #12 SGO2 (ENSCATG00000027226) #13 KCTD18 (ENSCATG00000044706) #14 SPATS2L (ENSCATG00000008807) #15 MAIP1 (ENSCATG00000036858) #18 TYW5 (ENSCATG00000033078) #19 C2orf69 (ENSCATG00000031233) #20 FTCDNL1 (ENSCATG00000018934) ENSCATG00000044312 SATB2 (ENSCATG00000017161) #22 PLCL1 (ENSCATG00000014153) #24 BOLL (ENSCATG00000004430) #25 MARS2 (ENSCATG00000001827) #26 GLUD2 (ENSCATG00000044639) RFTN2 (ENSCATG00000031580) #27 MOB4 (ENSCATG00000002964) ##28 ENSCATG00000022859 ##29 HSPD1 (ENSCATG00000044175) ##30 COQ10B (ENSCATG00000031857) #31 ENSCATG00000031238 SF3B1 (ENSCATG00000035735) #32 ENSCATG00000040754 ENSCATG00000039142 ANKRD44 (ENSCATG00000034086) #34 PGAP1 (ENSCATG00000041899) #35 Rhinopithecus ANCESTRAL SPECIES 83 ENSGT00940000163579 #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00950000183743 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000000950.c.b.d.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00390000000854.c.b.k.a.a.b ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a.a ##28 ENSGT00390000006350.m.a.c.a.mb #29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367.w #31 ENSGT00390000018393 #32 ENSGT00940000153941.a.a.h ENSGT00940000157455.i.b ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 Black snub-nosed monkey MODERN SPECIES 1955 MAIP1 (ENSRBIG00000010133) #18 TYW5 (ENSRBIG00000039190) #19 C2orf69 (ENSRBIG00000038270) #20 ENSRBIG00000040998 SATB2 (ENSRBIG00000026956) #22 PLCL1 (ENSRBIG00000030591) #24 Golden snub-nosed monkey MODERN SPECIES 676 ENSRROG00000029517 #7 CLK1 (ENSRROG00000035273) #8 BZW1 (ENSRROG00000044305) #9 ENSRROG00000043595 #10 ENSRROG00000034026 #11 AOX1 (ENSRROG00000043118) #12 SGO2 (ENSRROG00000037302) #13 KCTD18 (ENSRROG00000043788) #14 SPATS2L (ENSRROG00000041208) #15 ENSRROG00000043858 ENSRROG00000040812 #18 TYW5 (ENSRROG00000033012) #19 C2orf69 (ENSRROG00000028208) #20 FTCDNL1 (ENSRROG00000042811) ENSRROG00000032256 SATB2 (ENSRROG00000044735) #22 Platyrrhini ANCESTRAL SPECIES 9 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234.c #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.b.b ##29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 Cebidae ANCESTRAL SPECIES 11 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234.c #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.a.c.b.a.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 Cebidae_a ANCESTRAL SPECIES 16 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234.c #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00390000006350.m.a.c.b.a.a ##29 ENSGT00390000005727.a.b.a.b.c.a.a ##30 ENSGT00940000155367 #31 ENSGT00950000183198.c.a.a.b ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Bolivian squirrel monkey MODERN SPECIES 56 HYCC2 (ENSSBOG00000033197) ENSSBOG00000025751 NIF3L1 (ENSSBOG00000034561) ENSSBOG00000028593 #7 CLK1 (ENSSBOG00000031614) #8 BZW1 (ENSSBOG00000020710) #9 ENSSBOG00000034034 #10 AOX1 (ENSSBOG00000032424) #12 SGO2 (ENSSBOG00000035222) #13 KCTD18 (ENSSBOG00000031520) #14 SPATS2L (ENSSBOG00000031853) #15 MAIP1 (ENSSBOG00000033061) #18 TYW5 (ENSSBOG00000020625) #19 C2orf69 (ENSSBOG00000031239) #20 FTCDNL1 (ENSSBOG00000021980) SATB2 (ENSSBOG00000028702) #22 ENSSBOG00000007950 PLCL1 (ENSSBOG00000033477) #24 BOLL (ENSSBOG00000027161) #25 MARS2 (ENSSBOG00000016226) #26 RFTN2 (ENSSBOG00000031373) #27 MOB4 (ENSSBOG00000023092) ##28 ENSSBOG00000024433 ENSSBOG00000027158 ##29 HSPD1 (ENSSBOG00000034003) ##30 COQ10B (ENSSBOG00000021591) #31 ENSSBOG00000024424 SF3B1 (ENSSBOG00000020080) #32 ANKRD44 (ENSSBOG00000020670) #34 PGAP1 (ENSSBOG00000019868) #35 C2orf66 (ENSSBOG00000021609) Capuchin MODERN SPECIES 178 FAM126B (ENSCCAG00000029565) ORC2 (ENSCCAG00000000270) NIF3L1 (ENSCCAG00000020100) PPIL3 (ENSCCAG00000019393) CLK1 (ENSCCAG00000021387) #8 BZW1 (ENSCCAG00000012616) #9 ENSCCAG00000028426 #10 AOX1 (ENSCCAG00000025414) #12 SGO2 (ENSCCAG00000032369) #13 KCTD18 (ENSCCAG00000023011) #14 SPATS2L (ENSCCAG00000033886) #15 MAIP1 (ENSCCAG00000012313) #18 TYW5 (ENSCCAG00000030363) #19 C2orf69 (ENSCCAG00000025235) #20 ENSCCAG00000027889 SATB2 (ENSCCAG00000028159) #22 PLCL1 (ENSCCAG00000008545) #24 BOLL (ENSCCAG00000026623) #25 MARS2 (ENSCCAG00000019937) #26 ENSCCAG00000037834 RFTN2 (ENSCCAG00000034642) #27 MOB4 (ENSCCAG00000026299) ##28 ENSCCAG00000018271 ##29 ENSCCAG00000028857 ##30 Marmoset MODERN SPECIES 18 CLK1 (ENSCJAG00000004319) #8 BZW1 (ENSCJAG00000004267) #9 ENSCJAG00000033419 #10 AOX1 (ENSCJAG00000004230) #12 SGO2 (ENSCJAG00000004216) #13 KCTD18 (ENSCJAG00000031173) #14 ENSCJAG00000085721 SPATS2L (ENSCJAG00000004173) #15 ENSCJAG00000083755 MAIP1 (ENSCJAG00000037075) #18 TYW5 (ENSCJAG00000004155) #19 C2orf69 (ENSCJAG00000004149) #20 ENSCJAG00000044172 ENSCJAG00000078875 ENSCJAG00000082819 SATB2 (ENSCJAG00000004111) #22 ENSCJAG00000055486 ENSCJAG00000085382 PLCL1 (ENSCJAG00000004100) #24 ENSCJAG00000070051 BOLL (ENSCJAG00000004092) #25 MARS2 (ENSCJAG00000022885) #26 ENSCJAG00000077720 RFTN2 (ENSCJAG00000058836) #27 MOB4 (ENSCJAG00000045626) ##28 ENSCJAG00000084245 ENSCJAG00000041512 ##29 HSPD1 (ENSCJAG00000003990) ##30 COQ10B (ENSCJAG00000039085) #31 SF3B1 (ENSCJAG00000003902) #32 ANKRD44 (ENSCJAG00000003803) #34 Mas night monkey MODERN SPECIES 492 CLK1 (ENSANAG00000027111) #8 BZW1 (ENSANAG00000021489) #9 ENSANAG00000023906 #10 AOX1 (ENSANAG00000025069) #12 SGO2 (ENSANAG00000030373) #13 KCTD18 (ENSANAG00000023292) #14 SPATS2L (ENSANAG00000029380) #15 MAIP1 (ENSANAG00000031625) #18 TYW5 (ENSANAG00000024108) #19 C2orf69 (ENSANAG00000022030) #20 ENSANAG00000023820 SATB2 (ENSANAG00000024206) #22 PLCL1 (ENSANAG00000022909) #24 BOLL (ENSANAG00000031449) #25 ENSANAG00000027174 Tarsier MODERN SPECIES 4981 SATB2 (ENSTSYG00000002539) #22 LYG2 (ENSTSYG00000028650) ENSTSYG00000029768 TXNDC9 (ENSTSYG00000033216) EIF5B (ENSTSYG00000011850) REV1 (ENSTSYG00000011917) AFF3 (ENSTSYG00000029683) Strepsirrhini ANCESTRAL SPECIES 10 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00390000005727.a.b.a.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Bushbaby MODERN SPECIES 128 HYCC2 (ENSOGAG00000012336) ORC2 (ENSOGAG00000012329) NIF3L1 (ENSOGAG00000025311) PPIL3 (ENSOGAG00000007087) CLK1 (ENSOGAG00000012328) #8 BZW1 (ENSOGAG00000012326) #9 AOX2 (ENSOGAG00000025249) #10 AOX4 (ENSOGAG00000030158) #11 AOX1 (ENSOGAG00000006066) #12 SGO2 (ENSOGAG00000006064) #13 KCTD18 (ENSOGAG00000012335) #14 SPATS2L (ENSOGAG00000012331) #15 MAIP1 (ENSOGAG00000006965) #18 C2orf69 (ENSOGAG00000028317) #20 ENSOGAG00000027028 SATB2 (ENSOGAG00000006949) #22 Lemuriformes ANCESTRAL SPECIES 5 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.b ##28 ENSGT00390000006350.m.a.c.b.a.b ##29 ENSGT01050000244956.b.c.a ##28 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.a.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 Mouse lemur MODERN SPECIES 30 ENSMICG00000003372 PPIL3 (ENSMICG00000003367) CLK1 (ENSMICG00000003361) #8 BZW1 (ENSMICG00000003355) #9 ENSMICG00000033651 #10 ENSMICG00000027664 #11 AOX1 (ENSMICG00000005718) #12 SGO2 (ENSMICG00000033463) #13 ENSMICG00000003963 #14 SPATS2L (ENSMICG00000003956) #15 MAIP1 (ENSMICG00000044985) #18 TYW5 (ENSMICG00000046098) #19 C2orf69 (ENSMICG00000035511) #20 ENSMICG00000026608 ENSMICG00000037134 SATB2 (ENSMICG00000009378) #22 PLCL1 (ENSMICG00000011854) #24 BOLL (ENSMICG00000011845) #25 RFTN2 (ENSMICG00000028117) #27 ENSMICG00000037985 ##28 HSPD1 (ENSMICG00000028600) ##30 HSPE1 (ENSMICG00000046768) #29 COQ10B (ENSMICG00000013910) #31 SF3B1 (ENSMICG00000013879) #32 ANKRD44 (ENSMICG00000013853) #34 PGAP1 (ENSMICG00000013824) #35 C2orf66 (ENSMICG00000043136) GTF3C3 (ENSMICG00000013800) #36 CCDC150 (ENSMICG00000013761) HECW2 (ENSMICG00000013727) #37 STK17B (ENSMICG00000013716) Lemuriformes_a ANCESTRAL SPECIES 15 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.c.a ##28 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.a.b ##30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 Coquerels sifaka MODERN SPECIES 94 NDUFB3 (ENSPCOG00000020529) HYCC2 (ENSPCOG00000014611) ORC2 (ENSPCOG00000021783) NIF3L1 (ENSPCOG00000018022) PPIL3 (ENSPCOG00000028235) CLK1 (ENSPCOG00000018180) #8 ENSPCOG00000015831 #9 ENSPCOG00000015215 #10 ENSPCOG00000027597 #11 AOX1 (ENSPCOG00000021840) #12 ENSPCOG00000024135 #13 SPATS2L (ENSPCOG00000015945) #15 MAIP1 (ENSPCOG00000008943) #18 C2orf69 (ENSPCOG00000006950) #20 FTCDNL1 (ENSPCOG00000019867) ENSPCOG00000014379 #22 Greater bamboo lemur MODERN SPECIES 225 MAK (ENSPSMG00000025468) TMEM14C (ENSPSMG00000025455) C6orf52 (ENSPSMG00000025442) ENSPSMG00000025433 GCNT2 (ENSPSMG00000025432) HNRNPA1L3 (ENSPSMG00000025423) ##21 AOX1 (ENSPSMG00000025393) #12 SGO2 (ENSPSMG00000025322) #13 KCTD18 (ENSPSMG00000025316) #14 SPATS2L (ENSPSMG00000025292) #15 MAIP1 (ENSPSMG00000025245) #18 TYW5 (ENSPSMG00000025236) #19 C2orf69 (ENSPSMG00000025231) #20 FTCDNL1 (ENSPSMG00000025226) SATB2 (ENSPSMG00000025213) #22 PLCL1 (ENSPSMG00000025179) #24 BOLL (ENSPSMG00000025166) #25 MARS2 (ENSPSMG00000025148) #26 RFTN2 (ENSPSMG00000025142) #27 ENSPSMG00000025134 ##28 ENSPSMG00000025114 ##29 ENSPSMG00000025102 ##30 COQ10B (ENSPSMG00000025082) #31 SF3B1 (ENSPSMG00000025061) #32 ANKRD44 (ENSPSMG00000025023) #34 PGAP1 (ENSPSMG00000024985) #35 GTF3C3 (ENSPSMG00000024937) #36 CCDC150 (ENSPSMG00000024921) HECW2 (ENSPSMG00000024894) #37 STK17B (ENSPSMG00000024880) Laurasiatheria ANCESTRAL SPECIES 12 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000008096.B #22 Common shrew MODERN SPECIES 1424 SATB2 (ENSSARG00000014343) #22 Hedgehog MODERN SPECIES 2008 SATB2 (ENSEEUG00000014569) #22 Laurasiatheria_a ANCESTRAL SPECIES 16 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Artiodactyla ANCESTRAL SPECIES 13 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Suina ANCESTRAL SPECIES 3 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.b.a.b ##29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Pig MODERN SPECIES 6 ORC2 (ENSSSCG00000016098) NIF3L1 (ENSSSCG00000039654) PPIL3 (ENSSSCG00000016096) CLK1 (ENSSSCG00000016095) #8 BZW1 (ENSSSCG00000016094) #9 ENSSSCG00000016093 #10 ENSSSCG00000040051 #11 AOX1 (ENSSSCG00000029606) #12 SGO2 (ENSSSCG00000016092) #13 ENSSSCG00000016091 #14 SPATS2L (ENSSSCG00000016090) #15 MAIP1 (ENSSSCG00000036676) #18 TYW5 (ENSSSCG00000016087) #19 C2orf69 (ENSSSCG00000016086) #20 ENSSSCG00000016085 SATB2 (ENSSSCG00000021657) #22 ENSSSCG00000041534 PLCL1 (ENSSSCG00000016083) #24 ENSSSCG00000061867 BOLL (ENSSSCG00000016082) #25 MARS2 (ENSSSCG00000034494) #26 RFTN2 (ENSSSCG00000037483) #27 MOBKL3 (ENSSSCG00000016079) #28 HSPE1 (ENSSSCG00000016078) ##29 HSPD1 (ENSSSCG00000016077) #30 COQ10B (ENSSSCG00000016076) #31 ENSSSCG00000063544 #32 ENSSSCG00000016075 #32 ENSSSCG00000051570 ANKRD44 (ENSSSCG00000016074) #34 PGAP1 (ENSSSCG00000016073) #35 Chacoan peccary MODERN SPECIES 91 ORC2 (ENSCWAG00000010595) NIF3L1 (ENSCWAG00000010511) PPIL3 (ENSCWAG00000010443) CLK1 (ENSCWAG00000010341) #8 BZW1 (ENSCWAG00000009955) #9 ENSCWAG00000009721 #10 ENSCWAG00000009483 #11 AOX1 (ENSCWAG00000009210) #12 SGO2 (ENSCWAG00000009111) #13 KCTD18 (ENSCWAG00000009030) #14 SPATS2L (ENSCWAG00000008608) #15 MAIP1 (ENSCWAG00000008554) #18 TYW5 (ENSCWAG00000008494) #19 C2orf69 (ENSCWAG00000008457) #20 FTCDNL1 (ENSCWAG00000008365) SATB2 (ENSCWAG00000008150) #22 PLCL1 (ENSCWAG00000007994) #24 ENSCWAG00000007948 #25 Artiodactyla_a ANCESTRAL SPECIES 13 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 Artiodactyla_b ANCESTRAL SPECIES 12 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 Cetacea ANCESTRAL SPECIES 14 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b.i.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00390000012561.b.i.a #9 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 Odontoceti ANCESTRAL SPECIES 13 ENSGT00940000159152.d.d ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b.i.b #9 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 Odontoceti_a ANCESTRAL SPECIES 10 ENSGT00940000159152.d.d ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b.i.b #9 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Odontoceti_b ANCESTRAL SPECIES 12 ENSGT00940000159152.d.d ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b.i.b #9 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000154631.c.b ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Monodontidae ANCESTRAL SPECIES 10 ENSGT00940000159152.d.d ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b.i.b #9 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000154631.c.b ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Beluga whale MODERN SPECIES 84 ENSDLEG00000017782 FAM126B (ENSDLEG00000017730) ORC2 (ENSDLEG00000017685) NIF3L1 (ENSDLEG00000017669) PPIL3 (ENSDLEG00000017637) CLK1 (ENSDLEG00000017601) #8 ENSDLEG00000017537 #9 AOX1 (ENSDLEG00000017388) #12 SGO2 (ENSDLEG00000017351) #13 KCTD18 (ENSDLEG00000017330) #14 SPATS2L (ENSDLEG00000017277) #15 MAIP1 (ENSDLEG00000017256) #18 TYW5 (ENSDLEG00000017244) #19 CUNH2orf69 (ENSDLEG00000017234) #20 ENSDLEG00000017202 SATB2 (ENSDLEG00000017180) #22 ENSDLEG00000017147 PLCL1 (ENSDLEG00000017124) #24 ENSDLEG00000017113 ENSDLEG00000017109 BOLL (ENSDLEG00000017047) #25 MARS2 (ENSDLEG00000017031) #26 RFTN2 (ENSDLEG00000017004) #27 HSPE1 (ENSDLEG00000016991) #28 ENSDLEG00000016973 #29 HSPD1 (ENSDLEG00000016961) #30 COQ10B (ENSDLEG00000016950) #31 SF3B1 (ENSDLEG00000016863) #32 ANKRD44 (ENSDLEG00000016735) #34 PGAP1 (ENSDLEG00000016703) #35 GTF3C3 (ENSDLEG00000016677) #36 Narwhal MODERN SPECIES 302 ENSMMNG00015008710 ORC2 (ENSMMNG00015008727) NIF3L1 (ENSMMNG00015008742) PPIL3 (ENSMMNG00015008752) CLK1 (ENSMMNG00015008783) #8 ENSMMNG00015008840 #9 AOX1 (ENSMMNG00015008883) #12 ENSMMNG00015008917 #13 ENSMMNG00015008923 #13 KCTD18 (ENSMMNG00015008930) #14 SPATS2L (ENSMMNG00015008966) #15 MAIP1 (ENSMMNG00015009034) #18 TYW5 (ENSMMNG00015009041) #19 C2orf69 (ENSMMNG00015009051) #20 FTCDNL1 (ENSMMNG00015009064) SATB2 (ENSMMNG00015009088) #22 ENSMMNG00015009121 PLCL1 (ENSMMNG00015009132) #24 ENSMMNG00015009146 MARS2 (ENSMMNG00015009149) #26 RFTN2 (ENSMMNG00015009156) #27 ENSMMNG00015005118 MOB4 (ENSMMNG00015005131) #28 ENSMMNG00015005152 #29 ENSMMNG00015005160 #30 COQ10B (ENSMMNG00015005170) #31 SF3B1 (ENSMMNG00015005194) #32 ANKRD44 (ENSMMNG00015005236) #34 PGAP1 (ENSMMNG00015005302) #35 C2orf66 (ENSMMNG00015005331) GTF3C3 (ENSMMNG00015005350) #36 Vaquita MODERN SPECIES 18 ENSPSNG00000017913 ENSPSNG00000017952 ORC2 (ENSPSNG00000017971) NIF3L1 (ENSPSNG00000018036) PPIL3 (ENSPSNG00000018105) CLK1 (ENSPSNG00000018159) #8 ENSPSNG00000018409 #9 AOX1 (ENSPSNG00000018708) #12 SGO2 (ENSPSNG00000018985) #13 KCTD18 (ENSPSNG00000019019) #14 SPATS2L (ENSPSNG00000019081) #15 MAIP1 (ENSPSNG00000019254) #18 TYW5 (ENSPSNG00000019307) #19 C2orf69 (ENSPSNG00000019348) #20 ENSPSNG00000019397 SATB2 (ENSPSNG00000019498) #22 ENSPSNG00000019635 PLCL1 (ENSPSNG00000019688) #24 ENSPSNG00000019773 BOLL (ENSPSNG00000019819) #25 MARS2 (ENSPSNG00000020001) #26 RFTN2 (ENSPSNG00000020023) #27 MOB4 (ENSPSNG00000020101) #28 HSPD1 (ENSPSNG00000020243) #30 ENSPSNG00000020315 ##29 COQ10B (ENSPSNG00000020376) #31 SF3B1 (ENSPSNG00000020453) #32 ANKRD44 (ENSPSNG00000020570) #34 PGAP1 (ENSPSNG00000020691) #35 C2orf66 (ENSPSNG00000020837) GTF3C3 (ENSPSNG00000002123) #36 Dolphin MODERN SPECIES 16 SATB2 (ENSTTRG00000001254) #22 Sperm whale MODERN SPECIES 11 ENSPCTG00005001851 FAM126B (ENSPCTG00005001830) ORC2 (ENSPCTG00005001802) NIF3L1 (ENSPCTG00005001774) PPIL3 (ENSPCTG00005001749) CLK1 (ENSPCTG00005001575) #8 BZW1 (ENSPCTG00005001498) #9 AOX1 (ENSPCTG00005001418) #12 SGO2 (ENSPCTG00005001385) #13 KCTD18 (ENSPCTG00005001363) #14 SPATS2L (ENSPCTG00005001213) #15 MAIP1 (ENSPCTG00005001167) #18 TYW5 (ENSPCTG00005001148) #19 C2H2orf69 (ENSPCTG00005001135) #20 ENSPCTG00005001114 SATB2 (ENSPCTG00005001020) #22 PLCL1 (ENSPCTG00005000965) #24 BOLL (ENSPCTG00005000834) #25 MARS2 (ENSPCTG00005000802) #26 RFTN2 (ENSPCTG00005000782) #27 MOB4 (ENSPCTG00005000750) #28 HSPE1 (ENSPCTG00005000700) #29 HSPD1 (ENSPCTG00005000653) #30 COQ10B (ENSPCTG00005000606) #31 SF3B1 (ENSPCTG00005000567) #32 ANKRD44 (ENSPCTG00005000458) #34 PGAP1 (ENSPCTG00005000363) #35 C2orf66 (ENSPCTG00005000282) GTF3C3 (ENSPCTG00005000262) #36 ENSPCTG00005000238 ENSPCTG00005000224 Blue whale MODERN SPECIES 18 ORC2 (ENSBMSG00010003997) NIF3L1 (ENSBMSG00010003954) PPIL3 (ENSBMSG00010003923) CLK1 (ENSBMSG00010003860) #8 ENSBMSG00010003785 #9 ENSBMSG00010003674 #10 AOX1 (ENSBMSG00010003482) #12 ENSBMSG00010003395 #13 ENSBMSG00010003382 #13 KCTD18 (ENSBMSG00010003365) #14 SPATS2L (ENSBMSG00010003251) #15 MAIP1 (ENSBMSG00010003193) #18 TYW5 (ENSBMSG00010003179) #19 C2orf69 (ENSBMSG00010003167) #20 FTCDNL1 (ENSBMSG00010003148) SATB2 (ENSBMSG00010003076) #22 PLCL1 (ENSBMSG00010002964) #24 BOLL (ENSBMSG00010002886) #25 MARS2 (ENSBMSG00010002857) #26 RFTN2 (ENSBMSG00010002848) #27 MOB4 (ENSBMSG00010002811) #28 ENSBMSG00010002778 #29 HSPD1 (ENSBMSG00010002754) #30 COQ10B (ENSBMSG00010002718) #31 SF3B1 (ENSBMSG00010002624) #32 ENSBMSG00010002564 ANKRD44 (ENSBMSG00010002506) #34 PGAP1 (ENSBMSG00010002370) #35 C2orf66 (ENSBMSG00010002279) GTF3C3 (ENSBMSG00010002241) #36 CCDC150 (ENSBMSG00010002134) Pecora ANCESTRAL SPECIES 16 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 Percora_a ANCESTRAL SPECIES 5 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 Bovidae ANCESTRAL SPECIES 8 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 Bovinae ANCESTRAL SPECIES 5 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 Bos ANCESTRAL SPECIES 6 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.g #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 Bos_a ANCESTRAL SPECIES 4 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.g #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 Wild yak MODERN SPECIES 690 AOX1 (ENSBMUG00000000894) #12 SGO2 (ENSBMUG00000000973) #13 KCTD18 (ENSBMUG00000001001) #14 SPATS2L (ENSBMUG00000001103) #15 MAIP1 (ENSBMUG00000001172) #18 TYW5 (ENSBMUG00000001180) #19 C2orf69 (ENSBMUG00000001195) #20 FTCDNL1 (ENSBMUG00000001215) SATB2 (ENSBMUG00000001288) #22 PLCL1 (ENSBMUG00000001392) #24 Domestic yak MODERN SPECIES 11 NIF3L1 (ENSBGRG00000022968) ENSBGRG00000023065 #7 CLK1 (ENSBGRG00000023102) #8 BZW1 (ENSBGRG00000023222) #9 ENSBGRG00000023761 #10 ENSBGRG00000026310 #11 ENSBGRG00000026671 AOX1 (ENSBGRG00000026674) #12 SGO2 (ENSBGRG00000026677) #13 KCTD18 (ENSBGRG00000026680) #14 SPATS2L (ENSBGRG00000026684) #15 MAIP1 (ENSBGRG00000026693) #18 TYW5 (ENSBGRG00000026697) #19 C2orf69 (ENSBGRG00000026703) #20 FTCDNL1 (ENSBGRG00000026708) SATB2 (ENSBGRG00000026716) #22 ENSBGRG00000000192 PLCL1 (ENSBGRG00000000210) #24 BOLL (ENSBGRG00000000262) #25 MARS2 (ENSBGRG00000000375) #26 RFTN2 (ENSBGRG00000000406) #27 ENSBGRG00000000487 #28 HSPE1 (ENSBGRG00000000521) #29 HSPD1 (ENSBGRG00000000539) #30 COQ10B (ENSBGRG00000000566) #31 SF3B1 (ENSBGRG00000000604) #32 ANKRD44 (ENSBGRG00000000733) #34 PGAP1 (ENSBGRG00000000882) #35 C2orf66 (ENSBGRG00000001016) GTF3C3 (ENSBGRG00000001029) #36 ENSBGRG00000001058 Bos_b ANCESTRAL SPECIES 3 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.g #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b.a #30 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00940000162534.b ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Cow MODERN SPECIES 11 PPIL3 (ENSBTAG00000005416) #7 CLK1 (ENSBTAG00000005408) #8 BZW1 (ENSBTAG00000006049) #9 AOX2 (ENSBTAG00000026812) #10 AOX4 (ENSBTAG00000038878) #11 ENSBTAG00000047849 AOX1 (ENSBTAG00000009725) #12 SGO2 (ENSBTAG00000031579) #13 KCTD18 (ENSBTAG00000002272) #14 SPATS2L (ENSBTAG00000016092) #15 ENSBTAG00000024003 MAIP1 (ENSBTAG00000019231) #18 TYW5 (ENSBTAG00000019232) #19 C2H2orf69 (ENSBTAG00000009952) #20 ENSBTAG00000031595 SATB2 (ENSBTAG00000016334) #22 PLCL1 (ENSBTAG00000007635) #24 BOLL (ENSBTAG00000031614) #25 MARS2 (ENSBTAG00000002056) #26 RFTN2 (ENSBTAG00000007652) #27 MOB4 (ENSBTAG00000019116) #28 HSPE1 (ENSBTAG00000012589) #29 HSPD1 (ENSBTAG00000012586) #30 COQ10B (ENSBTAG00000004659) #31 SF3B1 (ENSBTAG00000008915) #32 ENSBTAG00000012171 ANKRD44 (ENSBTAG00000031696) #34 PGAP1 (ENSBTAG00000020416) #35 GTF3C3 (ENSBTAG00000007779) #36 CCDC150 (ENSBTAG00000017695) HECW2 (ENSBTAG00000020696) #37 Hybrid Bos Indicus MODERN SPECIES 11 NIF3L1 (ENSBIXG00005031554) PPIL3 (ENSBIXG00005031553) CLK1 (ENSBIXG00005031552) #8 BZW1 (ENSBIXG00005031551) #9 ENSBIXG00005031550 #10 ENSBIXG00005030534 #11 AOX1 (ENSBIXG00005008599) #12 SGO2 (ENSBIXG00005008643) #13 KCTD18 (ENSBIXG00005005902) #14 ENSBIXG00005008660 SPATS2L (ENSBIXG00005008726) #15 MAIP1 (ENSBIXG00005008787) #18 TYW5 (ENSBIXG00005008805) #19 C2orf69 (ENSBIXG00005008818) #20 FTCDNL1 (ENSBIXG00005008837) SATB2 (ENSBIXG00005008954) #22 PLCL1 (ENSBIXG00005009092) #24 ENSBIXG00005009140 BOLL (ENSBIXG00005009209) #25 MARS2 (ENSBIXG00005009234) #26 RFTN2 (ENSBIXG00005009241) #27 MOB4 (ENSBIXG00005009278) #28 ENSBIXG00005009301 #29 ENSBIXG00005009345 #30 COQ10B (ENSBIXG00005009394) #31 SF3B1 (ENSBIXG00005000503) #32 ENSBIXG00005009496 ANKRD44 (ENSBIXG00005009540) #34 PGAP1 (ENSBIXG00005009684) #35 C2orf66 (ENSBIXG00005009722) GTF3C3 (ENSBIXG00005005945) #36 American bison MODERN SPECIES 3330 CLK1 (ENSBBBG00000002583) #8 BZW1 (ENSBBBG00000013019) #9 ENSBBBG00000013042 #10 ENSBBBG00000013095 #11 ENSBBBG00000002631 AOX1 (ENSBBBG00000013130) #12 ENSBBBG00000013142 #13 ENSBBBG00000013146 #13 KCTD18 (ENSBBBG00000013155) #14 ENSBBBG00000013159 SPATS2L (ENSBBBG00000013236) #15 MAIP1 (ENSBBBG00000001643) #18 TYW5 (ENSBBBG00000013257) #19 C2orf69 (ENSBBBG00000002681) #20 FTCDNL1 (ENSBBBG00000008285) SATB2 (ENSBBBG00000013343) #22 PLCL1 (ENSBBBG00000002738) #24 BOLL (ENSBBBG00000013412) #25 MARS2 (ENSBBBG00000013415) #26 RFTN2 (ENSBBBG00000002765) #27 MOB4 (ENSBBBG00000013501) #28 ENSBBBG00000013516 ##29 HSPD1 (ENSBBBG00000013534) #30 ENSBBBG00000007252 #31 ENSBBBG00000013596 #32 ENSBBBG00000013601 ANKRD44 (ENSBBBG00000013667) #34 PGAP1 (ENSBBBG00000013723) #35 C2orf66 (ENSBBBG00000013730) GTF3C3 (ENSBBBG00000002934) #36 ENSBBBG00000013757 Caprinae ANCESTRAL SPECIES 5 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493.h #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b.e #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367.s #31 ENSGT00940000155367.t #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Rambouillet Sheep MODERN SPECIES 11 NIF3L1 (ENSOARG00020016593) PPIL3 (ENSOARG00020016501) CLK1 (ENSOARG00020016395) #8 BZW1 (ENSOARG00020015764) #9 ENSOARG00020015365 #10 ENSOARG00020015282 ENSOARG00020015070 #11 AOX1 (ENSOARG00020014833) #12 ENSOARG00020014683 #14 ENSOARG00020014668 SPATS2L (ENSOARG00020014270) #15 MAIP1 (ENSOARG00020014186) #18 TYW5 (ENSOARG00020014145) #19 C2orf69 (ENSOARG00020014115) #20 FTCDNL1 (ENSOARG00020013918) SATB2 (ENSOARG00020013534) #22 ENSOARG00020013422 ENSOARG00020013393 ENSOARG00020013380 ENSOARG00020013353 ENSOARG00020013326 ENSOARG00020013287 BOLL (ENSOARG00020012643) #25 MARS2 (ENSOARG00020012596) #26 RFTN2 (ENSOARG00020012524) #27 ENSOARG00020012334 #28 HSP10 (ENSOARG00020012227) #29 ENSOARG00020012172 #30 COQ10B (ENSOARG00020011999) #31 SF3B1 (ENSOARG00020011806) #32 ANKRD44 (ENSOARG00020010197) #34 Goat MODERN SPECIES 11 NIF3L1 (ENSCHIG00000009478) PPIL3 (ENSCHIG00000019642) CLK1 (ENSCHIG00000018314) #8 BZW1 (ENSCHIG00000019964) #9 ENSCHIG00000020570 #10 ENSCHIG00000013677 #11 ENSCHIG00000019390 AOX1 (ENSCHIG00000013439) #12 SGO2 (ENSCHIG00000013638) #13 KCTD18 (ENSCHIG00000022753) #14 SPATS2L (ENSCHIG00000026377) #15 MAIP1 (ENSCHIG00000007507) #18 ENSCHIG00000017324 #19 ENSCHIG00000011016 #20 FTCDNL1 (ENSCHIG00000022126) SATB2 (ENSCHIG00000022376) #22 PLCL1 (ENSCHIG00000013331) #24 ENSCHIG00000011685 ENSCHIG00000021317 BOLL (ENSCHIG00000024995) #25 MARS2 (ENSCHIG00000016548) #26 RFTN2 (ENSCHIG00000012903) #27 ENSCHIG00000026973 #28 HSPE1 (ENSCHIG00000009467) #29 HSPD1 (ENSCHIG00000004382) #30 ENSCHIG00000020913 #31 SF3B1 (ENSCHIG00000015226) #32 ANKRD44 (ENSCHIG00000017665) #34 ENSCHIG00000012550 PGAP1 (ENSCHIG00000018177) #35 GTF3C3 (ENSCHIG00000016485) #36 Siberian musk deer MODERN SPECIES 351 PPIL3 (ENSMMSG00000024329) CLK1 (ENSMMSG00000024326) #8 ENSMMSG00000024321 #9 ENSMMSG00000024314 #10 ENSMMSG00000013161 #11 ENSMMSG00000012463 AOX1 (ENSMMSG00000012371) #12 SGO2 (ENSMMSG00000012334) #13 KCTD18 (ENSMMSG00000012309) #14 SPATS2L (ENSMMSG00000011944) #15 MAIP1 (ENSMMSG00000011886) #18 TYW5 (ENSMMSG00000011859) #19 C2orf69 (ENSMMSG00000011836) #20 ENSMMSG00000011819 ENSMMSG00000011780 SATB2 (ENSMMSG00000011682) #22 Yarkand deer MODERN SPECIES 31 ENSCHYG00000004999 BZW1 (ENSCHYG00000009251) #9 ENSCHYG00000009654 #10 ENSCHYG00000009851 #11 ENSCHYG00000010410 ENSCHYG00000010452 AOX1 (ENSCHYG00000010517) #12 SGO2 (ENSCHYG00000011236) #13 KCTD18 (ENSCHYG00000011325) #14 SPATS2L (ENSCHYG00000011390) #15 ENSCHYG00000011736 MAIP1 (ENSCHYG00000011759) #18 TYW5 (ENSCHYG00000011850) #19 C2orf69 (ENSCHYG00000011903) #20 ENSCHYG00000011965 SATB2 (ENSCHYG00000012100) #22 ENSCHYG00000012371 PLCL1 (ENSCHYG00000012427) #24 BOLL (ENSCHYG00000012765) #25 MARS2 (ENSCHYG00000013177) #26 RFTN2 (ENSCHYG00000013201) #27 MOB4 (ENSCHYG00000013303) #28 ENSCHYG00000013442 ##29 ENSCHYG00000013593 #30 ENSCHYG00000013673 #31 SF3B1 (ENSCHYG00000013853) #32 ANKRD44 (ENSCHYG00000014222) #34 PGAP1 (ENSCHYG00000015550) #35 C2orf66 (ENSCHYG00000015983) GTF3C3 (ENSCHYG00000016098) #36 CCDC150 (ENSCHYG00000016506) Camelidae ANCESTRAL SPECIES 58 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000006350.m.a.c.b.a.b ##29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Arabian camel MODERN SPECIES 31 PPIL3 (ENSCDRG00005007234) CLK1 (ENSCDRG00005007272) #8 BZW1 (ENSCDRG00005008038) #9 ENSCDRG00005008482 #10 ENSCDRG00005008740 #11 AOX1 (ENSCDRG00005009121) #12 ENSCDRG00005009409 #13 ENSCDRG00005009460 #13 KCTD18 (ENSCDRG00005009496) #14 SPATS2L (ENSCDRG00005009592) #15 ENSCDRG00005010296 MAIP1 (ENSCDRG00005010319) #18 TYW5 (ENSCDRG00005010376) #19 C2orf69 (ENSCDRG00005010427) #20 FTCDNL1 (ENSCDRG00005010462) SATB2 (ENSCDRG00005010563) #22 PLCL1 (ENSCDRG00005010932) #24 BOLL (ENSCDRG00005011111) #25 MARS2 (ENSCDRG00005011548) #26 RFTN2 (ENSCDRG00005011566) #27 MOB4 (ENSCDRG00005011619) #28 HSPE1 (ENSCDRG00005011802) #29 HSPD1 (ENSCDRG00005011897) #30 COQ10B (ENSCDRG00005012028) #31 ENSCDRG00005012185 SF3B1 (ENSCDRG00005012215) #32 ANKRD44 (ENSCDRG00005012443) #34 PGAP1 (ENSCDRG00005012687) #35 C2orf66 (ENSCDRG00005012843) GTF3C3 (ENSCDRG00005012878) #36 CCDC150 (ENSCDRG00005012991) Alpaca MODERN SPECIES 63 MAIP1 (ENSVPAG00000007005) #18 TYW5 (ENSVPAG00000007004) #19 C2orf69 (ENSVPAG00000007002) #20 SATB2 (ENSVPAG00000007001) #22 Laurasiatheria_b ANCESTRAL SPECIES 16 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Carnivora ANCESTRAL SPECIES 17 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Caniformia ANCESTRAL SPECIES 14 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.b ##29 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Caniformia_b ANCESTRAL SPECIES 13 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00390000004856.w.b ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Ursidae ANCESTRAL SPECIES 7 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b.f #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00390000004856.w.b ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393.p #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Ursus ANCESTRAL SPECIES 4 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b.f #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01010000225408 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00940000154276.kb.a.b ENSGT00390000004856.w.b ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393.p #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000016929 #36 American black bear MODERN SPECIES 846 ENSUAMG00000028250 SATB2 (ENSUAMG00000028249) #22 Polar bear MODERN SPECIES 142 ORC2 (ENSUMAG00000021479) PPIL3 (ENSUMAG00000021460) NIF3L1 (ENSUMAG00000021455) CLK1 (ENSUMAG00000021445) #8 BZW1 (ENSUMAG00000021441) #9 ENSUMAG00000021399 #10 ENSUMAG00000021134 #11 AOX1 (ENSUMAG00000021073) #12 SGO2 (ENSUMAG00000021068) #13 KCTD18 (ENSUMAG00000021066) #14 SPATS2L (ENSUMAG00000021060) #15 MAIP1 (ENSUMAG00000021043) #18 TYW5 (ENSUMAG00000021039) #19 C2orf69 (ENSUMAG00000021037) #20 FTCDNL1 (ENSUMAG00000021033) SATB2 (ENSUMAG00000021003) #22 PLCL1 (ENSUMAG00000020984) #24 ENSUMAG00000020978 ENSUMAG00000020976 BOLL (ENSUMAG00000020969) #25 MARS2 (ENSUMAG00000020961) #26 RFTN2 (ENSUMAG00000020958) #27 MOB4 (ENSUMAG00000020955) #28 HSPE1 (ENSUMAG00000020954) #29 HSPD1 (ENSUMAG00000020952) #30 COQ10B (ENSUMAG00000020949) #31 SF3B1 (ENSUMAG00000020945) #32 ANKRD44 (ENSUMAG00000020937) #34 PGAP1 (ENSUMAG00000020815) #35 GTF3C3 (ENSUMAG00000020787) #36 CCDC150 (ENSUMAG00000020726) Giant Panda MODERN SPECIES 11 ORC2 (ENSAMEG00000005940) NIF3L1 (ENSAMEG00000005921) PPIL3 (ENSAMEG00000005917) CLK1 (ENSAMEG00000005887) #8 BZW1 (ENSAMEG00000005859) #9 AOX2 (ENSAMEG00000005633) #10 AOX4 (ENSAMEG00000005561) #11 AOX1 (ENSAMEG00000005445) #12 SGO2 (ENSAMEG00000005435) #13 KCTD18 (ENSAMEG00000005423) #14 SPATS2L (ENSAMEG00000005405) #15 MAIP1 (ENSAMEG00000005390) #18 TYW5 (ENSAMEG00000005386) #19 C2orf69 (ENSAMEG00000005381) #20 ENSAMEG00000023460 SATB2 (ENSAMEG00000005350) #22 ENSAMEG00000019732 PLCL1 (ENSAMEG00000013707) #24 BOLL (ENSAMEG00000013712) #25 MARS2 (ENSAMEG00000019748) #26 RFTN2 (ENSAMEG00000013737) #27 MOB4 (ENSAMEG00000013751) #28 ENSAMEG00000013769 ##29 HSPD1 (ENSAMEG00000013770) #30 COQ10B (ENSAMEG00000013802) #31 SF3B1 (ENSAMEG00000013809) #32 ANKRD44 (ENSAMEG00000013836) #34 PGAP1 (ENSAMEG00000013887) #35 C2orf66 (ENSAMEG00000013924) GTF3C3 (ENSAMEG00000013925) #36 CCDC150 (ENSAMEG00000013946) Mustelinae ANCESTRAL SPECIES 44 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000163579 #7 ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.b.a.a ##29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 American mink MODERN SPECIES 40 NIF3L (ENSNVIG00000008895) ENSNVIG00000008933 #7 ENSNVIG00000008938 #8 ENSNVIG00000008952 #8 BZW1 (ENSNVIG00000008992) #9 ENSNVIG00000009087 #10 ENSNVIG00000009216 #11 AOX1 (ENSNVIG00000009846) #12 SGO2 (ENSNVIG00000009949) #13 KCTD18 (ENSNVIG00000009981) #14 SPATS2L (ENSNVIG00000010010) #15 MAIP1 (ENSNVIG00000010220) #18 TYW5 (ENSNVIG00000010238) #19 C2orf69 (ENSNVIG00000010249) #20 ENSNVIG00000010260 SATB2 (ENSNVIG00000010289) #22 PLCL1 (ENSNVIG00000010416) #24 ENSNVIG00000010433 BOLL (ENSNVIG00000010444) #25 MARS2 (ENSNVIG00000010510) #26 RFTN2 (ENSNVIG00000010521) #27 PHOCN (ENSNVIG00000010530) #28 ENSNVIG00000010568 ##29 ENSNVIG00000010575 #30 COQ10B (ENSNVIG00000010606) #31 SF3B1 (ENSNVIG00000010631) #32 ANKRD44 (ENSNVIG00000010686) #34 PGAP1 (ENSNVIG00000010723) #35 C2orf66 (ENSNVIG00000010821) GTF3C3 (ENSNVIG00000010824) #36 CCDC150 (ENSNVIG00000010849) Ferret MODERN SPECIES 333 SGO2 (ENSMPUG00000008053) #13 KCTD18 (ENSMPUG00000008044) #14 SPATS2L (ENSMPUG00000008030) #15 MAIP1 (ENSMPUG00000008001) #18 TYW5 (ENSMPUG00000007993) #19 C2orf69 (ENSMPUG00000007987) #20 ENSMPUG00000007983 SATB2 (ENSMPUG00000007972) #22 PLCL1 (ENSMPUG00000007965) #24 BOLL (ENSMPUG00000007922) #25 MARS2 (ENSMPUG00000019823) #26 ENSMPUG00000019822 RFTN2 (ENSMPUG00000007918) #27 MOB4 (ENSMPUG00000007910) #28 ENSMPUG00000007818 #30 COQ10B (ENSMPUG00000007810) #31 SF3B1 (ENSMPUG00000007799) #32 ANKRD44 (ENSMPUG00000007785) #34 PGAP1 (ENSMPUG00000007770) #35 GTF3C3 (ENSMPUG00000007764) #36 CCDC150 (ENSMPUG00000007750) HECW2 (ENSMPUG00000007553) #37 STK17B (ENSMPUG00000007548) Canidae ANCESTRAL SPECIES 20 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01070000254992 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.b ##29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Canis_lupus ANCESTRAL SPECIES 32 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b.c #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000182922.a.a.a.b.a.a.b ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT01070000254992 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT01030000235401 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.b ##29 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 Dingo MODERN SPECIES 398 HYCC2 (ENSCAFG00020003567) ORC2 (ENSCAFG00020003630) NIF3L1 (ENSCAFG00020004364) PPIL3 (ENSCAFG00020004369) CLK1 (ENSCAFG00020004400) #8 ENSCAFG00020004433 #9 ENSCAFG00020004462 #10 ENSCAFG00020004494 #11 ENSCAFG00020004535 SGO2 (ENSCAFG00020004540) #13 KCTD18 (ENSCAFG00020004542) #14 SPATS2L (ENSCAFG00020004547) #15 MAIP1 (ENSCAFG00020004558) #18 ENSCAFG00020004570 #19 C2orf69 (ENSCAFG00020004572) #20 SATB2 (ENSCAFG00020004584) #22 PLCL1 (ENSCAFG00020004643) #24 ENSCAFG00020004654 BOLL (ENSCAFG00020004659) #25 MARS2 (ENSCAFG00020004676) #26 RFTN2 (ENSCAFG00020004690) #27 MOB4 (ENSCAFG00020004694) #28 ENSCAFG00020004700 ##29 HSPD1 (ENSCAFG00020004710) #30 ENSCAFG00020004741 COQ10B (ENSCAFG00020004745) #31 SF3B1 (ENSCAFG00020004750) #32 ANKRD44 (ENSCAFG00020004766) #34 PGAP1 (ENSCAFG00020004924) #35 GTF3C3 (ENSCAFG00020004945) #36 CCDC150 (ENSCAFG00020004958) Dog MODERN SPECIES 30 ORC2 (ENSCAFG00845029735) NIF3L1 (ENSCAFG00845029603) PPIL3 (ENSCAFG00845029569) CLK1 (ENSCAFG00845029455) #8 ENSCAFG00845029244 #9 AOX2 (ENSCAFG00845029172) #10 AOX4 (ENSCAFG00845028797) #11 RPL21 (ENSCAFG00845028706) SGO2 (ENSCAFG00845028523) #13 KCTD18 (ENSCAFG00845028480) #14 ENSCAFG00845028453 SPATS2L (ENSCAFG00845028292) #15 MAIP1 (ENSCAFG00845028191) #18 TYW5 (ENSCAFG00845028098) #19 C2orf69 (ENSCAFG00845028048) #20 SATB2 (ENSCAFG00845027789) #22 PLCL1 (ENSCAFG00845027611) #24 BOLL (ENSCAFG00845027465) #25 MARS2 (ENSCAFG00845027432) #26 RFTN2 (ENSCAFG00845027373) #27 ENSCAFG00845027301 HSPE1 (ENSCAFG00845027216) #28 HSPD1 (ENSCAFG00845027075) #30 SF3B1 (ENSCAFG00845026632) #32 COQ10B (ENSCAFG00845026337) #31 ENSCAFG00845026214 ANKRD44 (ENSCAFG00845025354) #34 PGAP1 (ENSCAFG00845024751) #35 C2orf66 (ENSCAFG00845024629) GTF3C3 (ENSCAFG00845024524) #36 CCDC150 (ENSCAFG00845023218) Red fox MODERN SPECIES 41 ORC2 (ENSVVUG00000018996) NIF3L1 (ENSVVUG00000019010) PPIL3 (ENSVVUG00000019021) CLK1 (ENSVVUG00000019051) #8 ENSVVUG00000019055 BZW1 (ENSVVUG00000019058) #9 ENSVVUG00000019458 #10 ENSVVUG00000025395 #11 SGO2 (ENSVVUG00000025845) #13 KCTD18 (ENSVVUG00000025846) #14 ENSVVUG00000025847 SPATS2L (ENSVVUG00000025851) #15 MAIP1 (ENSVVUG00000025867) #18 TYW5 (ENSVVUG00000025871) #19 C2orf69 (ENSVVUG00000025875) #20 SATB2 (ENSVVUG00000025880) #22 ENSVVUG00000025893 PLCL1 (ENSVVUG00000025896) #24 ENSVVUG00000025899 BOLL (ENSVVUG00000025901) #25 MARS2 (ENSVVUG00000025921) #26 RFTN2 (ENSVVUG00000025925) #27 MOB4 (ENSVVUG00000025930) #28 ENSVVUG00000025937 ##29 HSPD1 (ENSVVUG00000025940) #30 COQ10B (ENSVVUG00000025944) #31 SF3B1 (ENSVVUG00000025948) #32 ANKRD44 (ENSVVUG00000025957) #34 PGAP1 (ENSVVUG00000025981) #35 GTF3C3 (ENSVVUG00000025988) #36 CCDC150 (ENSVVUG00000025997) Felidae ANCESTRAL SPECIES 15 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00940000154107.b #13 ENSGT00530000064234.k #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00390000004856.w.b ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00940000167249 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367.o #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 Panthera ANCESTRAL SPECIES 9 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00940000154107.b #13 ENSGT00530000064234.k #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00390000004856.w.b ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367.o #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Panthera_a ANCESTRAL SPECIES 6 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00940000154107.b #13 ENSGT00530000064234.k #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00390000004856.w.b ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367.o #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 lion MODERN SPECIES 8 NDUFB3 (ENSPLOG00000015772) HYCC2 (ENSPLOG00000015803) ORC2 (ENSPLOG00000015970) NIF3L1 (ENSPLOG00000016032) PPIL3 (ENSPLOG00000016086) CLK1 (ENSPLOG00000016118) #8 BZW1 (ENSPLOG00000016320) #9 ENSPLOG00000016579 #10 SGO2 (ENSPLOG00000016840) #13 KCTD18 (ENSPLOG00000016872) #14 SPATS2L (ENSPLOG00000016944) #15 MAIP1 (ENSPLOG00000010863) #18 TYW5 (ENSPLOG00000010891) #19 C2orf69 (ENSPLOG00000010947) #20 FTCDNL1 (ENSPLOG00000010989) SATB2 (ENSPLOG00000011078) #22 PLCL1 (ENSPLOG00000011340) #24 ENSPLOG00000011407 BOLL (ENSPLOG00000011460) #25 MARS2 (ENSPLOG00000011689) #26 RFTN2 (ENSPLOG00000011715) #27 MOB4 (ENSPLOG00000011894) #28 ENSPLOG00000012097 #29 HSPD1 (ENSPLOG00000012200) #30 ENSPLOG00000012317 #31 ENSPLOG00000012415 SF3B1 (ENSPLOG00000012481) #32 ANKRD44 (ENSPLOG00000012744) #34 PGAP1 (ENSPLOG00000012908) #35 GTF3C3 (ENSPLOG00000013217) #36 CCDC150 (ENSPLOG00000013330) leopard MODERN SPECIES 115 HYCC2 (ENSPPRG00000010091) ORC2 (ENSPPRG00000010416) NIF3L1 (ENSPPRG00000011329) PPIL3 (ENSPPRG00000011604) CLK1 (ENSPPRG00000018038) #8 BZW1 (ENSPPRG00000021144) #9 ENSPPRG00000001179 #10 ENSPPRG00000002911 #11 SGO2 (ENSPPRG00000003606) #13 KCTD18 (ENSPPRG00000003708) #14 SPATS2L (ENSPPRG00000005755) #15 MAIP1 (ENSPPRG00000005920) #18 TYW5 (ENSPPRG00000005974) #19 C2orf69 (ENSPPRG00000006014) #20 FTCDNL1 (ENSPPRG00000006344) SATB2 (ENSPPRG00000006763) #22 ENSPPRG00000006827 ENSPPRG00000018398 PLCL1 (ENSPPRG00000006990) #24 BOLL (ENSPPRG00000007352) #25 MARS2 (ENSPPRG00000018464) #26 RFTN2 (ENSPPRG00000007473) #27 ENSPPRG00000007733 #29 MOB4 (ENSPPRG00000008095) #28 ENSPPRG00000008279 #30 ENSPPRG00000018513 ENSPPRG00000008688 #31 SF3B1 (ENSPPRG00000009090) #32 ANKRD44 (ENSPPRG00000009896) #34 PGAP1 (ENSPPRG00000010301) #35 C2orf66 (ENSPPRG00000010325) Tiger MODERN SPECIES 481 ENSPTIG00000017025 #14 SPATS2L (ENSPTIG00000009880) #15 MAIP1 (ENSPTIG00000007574) #18 TYW5 (ENSPTIG00000005502) #19 C2orf69 (ENSPTIG00000004162) #20 FTCDNL1 (ENSPTIG00000019386) SATB2 (ENSPTIG00000015066) #22 PLCL1 (ENSPTIG00000013578) #24 BOLL (ENSPTIG00000011925) #25 RFTN2 (ENSPTIG00000010229) #27 MOB4 (ENSPTIG00000008517) #28 HSPE1 (ENSPTIG00000007777) #29 HSPD1 (ENSPTIG00000006760) #30 ENSPTIG00000004508 #31 SF3B1 (ENSPTIG00000021557) #32 ANKRD44 (ENSPTIG00000018232) #34 PGAP1 (ENSPTIG00000013798) #35 C2orf66 (ENSPTIG00000013318) GTF3C3 (ENSPTIG00000011830) #36 CCDC150 (ENSPTIG00000010300) ENSPTIG00000007344 HECW2 (ENSPTIG00000004499) #37 Laurasiatheria_c ANCESTRAL SPECIES 18 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000167666 Chiroptera ANCESTRAL SPECIES 11 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.b ##29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367.r #31 ENSGT00390000018393 #32 ENSGT00950000182908.D.f #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 Megabat MODERN SPECIES 173 SATB2 (ENSPVAG00000012029) #22 Microchiroptera ANCESTRAL SPECIES 15 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.d ##29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367.r #31 ENSGT00390000018393 #32 ENSGT00950000182908.D.f #34 ENSGT00390000016484 #35 ENSGT00390000016929 #36 ENSGT00390000005285 ENSGT00940000155466 #37 ENSGT00940000154014.b.b Greater horseshoe bat MODERN SPECIES 26 ORC2 (ENSRFEG00010017722) NIF3L1 (ENSRFEG00010017775) PPIL3 (ENSRFEG00010017851) CLK1 (ENSRFEG00010017933) #8 BZW1 (ENSRFEG00010018183) #9 ENSRFEG00010018448 #10 ENSRFEG00010019480 #11 AOX1 (ENSRFEG00010021989) #12 SGO2 (ENSRFEG00010022000) #13 KCTD18 (ENSRFEG00010022002) #14 SPATS2L (ENSRFEG00010022016) #15 MAIP1 (ENSRFEG00010022032) #18 TYW5 (ENSRFEG00010022036) #19 C2orf69 (ENSRFEG00010022039) #20 FTCDNL1 (ENSRFEG00010022040) SATB2 (ENSRFEG00010022046) #22 PLCL1 (ENSRFEG00010022056) #24 BOLL (ENSRFEG00010022065) #25 MARS2 (ENSRFEG00010022069) #26 RFTN2 (ENSRFEG00010022072) #27 ENSRFEG00010022073 MOB4 (ENSRFEG00010022077) #28 ENSRFEG00010022080 ##29 HSPD1 (ENSRFEG00010022083) #30 ENSRFEG00010022086 #31 SF3B1 (ENSRFEG00010022087) #32 ANKRD44 (ENSRFEG00010022091) #34 PGAP1 (ENSRFEG00010022103) #35 GTF3C3 (ENSRFEG00010022114) #36 CCDC150 (ENSRFEG00010022122) HECW2 (ENSRFEG00010022130) #37 Microbat MODERN SPECIES 940 ORC2 (ENSMLUG00000001662) NIF3L1 (ENSMLUG00000001658) PPIL3 (ENSMLUG00000013189) CLK1 (ENSMLUG00000000344) #8 BZW1 (ENSMLUG00000001653) #9 ENSMLUG00000022412 #10 ENSMLUG00000027760 #11 AOX1 (ENSMLUG00000016684) #12 SGO2 (ENSMLUG00000004245) #13 KCTD18 (ENSMLUG00000006605) #14 SPATS2L (ENSMLUG00000006594) #15 MAIP1 (ENSMLUG00000015960) #18 TYW5 (ENSMLUG00000015955) #19 C2orf69 (ENSMLUG00000026751) #20 ENSMLUG00000011411 SATB2 (ENSMLUG00000001554) #22 PLCL1 (ENSMLUG00000002677) #24 BOLL (ENSMLUG00000004999) #25 RFTN2 (ENSMLUG00000004991) #27 MOB4 (ENSMLUG00000004971) #28 ENSMLUG00000000883 HSPE1 (ENSMLUG00000000878) ##29 ENSMLUG00000000871 #30 COQ10B (ENSMLUG00000000865) #31 SF3B1 (ENSMLUG00000000840) #32 ENSMLUG00000005254 ANKRD44 (ENSMLUG00000010842) #34 PGAP1 (ENSMLUG00000010784) #35 GTF3C3 (ENSMLUG00000024692) #36 CCDC150 (ENSMLUG00000001986) HECW2 (ENSMLUG00000007654) #37 Equus ANCESTRAL SPECIES 18 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 #8 ENSGT00390000012561.b #9 ENSGT00950000183114.a.b.b.f.a.b #10 ENSGT00950000183114.a.b.b.f.a.a #11 ENSGT00950000183114.a.b.b.f.b.b #12 ENSGT00950000183114.a.b.b.f.b.a #12 ENSGT00940000154107.b #13 ENSGT00530000064234 #14 ENSGT00390000001138.b #15 ENSGT00390000004145 #18 ENSGT00940000158493 #19 ENSGT00390000005550 #20 ENSGT00390000005581.b ENSGT00390000008096.B #22 ENSGT00940000158407 #24 ENSGT00530000063480.a #25 ENSGT00550000075136 #26 ENSGT00530000063609.a #27 ENSGT01050000244956.b #28 ENSGT00390000006350.m.a.c.a #29 ENSGT00390000005727.a.b.b #30 ENSGT00940000155367 #31 ENSGT00390000018393 #32 ENSGT00390000005254.i.a.b ENSGT00950000182908.D #34 ENSGT00390000016484 #35 ENSGT00390000009468 ENSGT00390000016929 #36 ENSGT00390000005285 Donkey MODERN SPECIES 24 NIF3L1 (ENSEASG00005001400) CLK1 (ENSEASG00005000996) #8 BZW1 (ENSEASG00005000922) #9 ENSEASG00005021400 #10 ENSEASG00005028089 #11 ENSEASG00005029204 #10 ENSEASG00005024840 #12 ENSEASG00005027058 #12 SGO2 (ENSEASG00005024538) #13 KCTD18 (ENSEASG00005020042) #14 SPATS2L (ENSEASG00005020050) #15 MAIP1 (ENSEASG00005020067) #18 TYW5 (ENSEASG00005026976) #19 C2orf69 (ENSEASG00005031146) #20 ENSEASG00005020080 ENSEASG00005029514 #22 PLCL1 (ENSEASG00005020113) #24 ENSEASG00005020114 BOLL (ENSEASG00005020122) #25 MARS2 (ENSEASG00005020133) #26 RFTN2 (ENSEASG00005020136) #27 MOB4 (ENSEASG00005020142) #28 HSPE1 (ENSEASG00005034821) #29 ENSEASG00005020152 #30 COQ10B (ENSEASG00005032559) #31 SF3B1 (ENSEASG00005020159) #32 ENSEASG00005020167 ANKRD44 (ENSEASG00005020169) #34 PGAP1 (ENSEASG00005020202) #35 C2orf66 (ENSEASG00005029887) GTF3C3 (ENSEASG00005020250) #36 Horse MODERN SPECIES 9 CLK1 (ENSECAG00000015355) #8 BZW1 (ENSECAG00000011768) #9 ENSECAG00000015199 #10 AOX4 (ENSECAG00000024701) #11 ENSECAG00000032497 #11 ENSECAG00000058396 ENSECAG00000007830 #12 ENSECAG00000018147 #12 SGO2 (ENSECAG00000006038) #13 KCTD18 (ENSECAG00000001039) #14 SPATS2L (ENSECAG00000018564) #15 MAIP1 (ENSECAG00000050073) #18 TYW5 (ENSECAG00000014128) #19 C18H2orf69 (ENSECAG00000014107) #20 ENSECAG00000013663 SATB2 (ENSECAG00000010043) #22 ENSECAG00000058569 BOLL (ENSECAG00000040654) #25 PLCL1 (ENSECAG00000007274) #24 MARS2 (ENSECAG00000004931) #26 RFTN2 (ENSECAG00000021296) #27 MOB4 (ENSECAG00000015560) #28 ENSECAG00000055696 ENSECAG00000049872 ##29 HSPD1 (ENSECAG00000008968) #30 COQ10B (ENSECAG00000006436) #31 SF3B1 (ENSECAG00000021657) #32 ENSECAG00000034847 ANKRD44 (ENSECAG00000008835) #34 PGAP1 (ENSECAG00000019980) #35 C2orf66 (ENSECAG00000058124)