Rodentia	ANCESTRAL SPECIES	20	ENSGT00940000153520.d.b.b	ENSGT00940000153934.a.b	ENSGT00940000163781	ENSGT00940000161054	ENSGT01030000234531.A.b.b.a	ENSGT00940000154179	ENSGT00940000153120.k.a.a	ENSGT00940000162558	ENSGT00940000153934.a.a	ENSGT00940000153307.d.b	ENSGT00940000163531 #18	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT01000000215173	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301	ENSGT00940000162786
Rodentia_A	ANCESTRAL SPECIES	19	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000153520.d.b.b	ENSGT00940000153934.a.b	ENSGT00940000163781	ENSGT00940000161054	ENSGT01030000234531.A.b.b.a	ENSGT00940000154179	ENSGT00940000153120.k.a.a	ENSGT00940000162558	ENSGT00940000153307.d.b	ENSGT00940000163531 #18	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821.k.a #34	ENSGT00940000156821.k.b #35	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301
Sciuridae	ANCESTRAL SPECIES	42	ENSGT00940000161517.D	ENSGT00940000163781	ENSGT00940000153934.a.b.k	ENSGT00940000161054	ENSGT00940000165289	ENSGT01030000234531.A.b.b.a	ENSGT00940000153120.k.a.a.db	ENSGT00940000153120.k.a.a.eb.b	ENSGT00940000153120.k.a.b.a	ENSGT00940000154179	ENSGT00940000153307.d.b	ENSGT00940000163531 #18	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821.k.a #34	ENSGT00940000156821.k.b #35	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301
Marmotini	ANCESTRAL SPECIES	53											ENSGT00940000153307.d.b.e.a.b	ENSGT00940000163531 #18	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821.k.a #34	ENSGT00940000156821.k.b #35	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301
Marmotini_b	ANCESTRAL SPECIES	54												ENSGT00940000163531 #18	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821.k.a #34	ENSGT00940000156821.k.b #35	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301
Arctic ground squirrel	MODERN SPECIES	543											ENSUPAG00010004770 #17	ENSUPAG00010004753 #18	GNAZ (ENSUPAG00010004743) #19	RSPH14 (ENSUPAG00010004716) #20	RAB36 (ENSUPAG00010004696) #21	BCR (ENSUPAG00010004667) #22	SPECC1L (ENSUPAG00010004655) #23	ADORA2A (ENSUPAG00010004649) #24	UPB1 (ENSUPAG00010004637) #25	GUCD1 (ENSUPAG00010004627) #26	SNRPD3 (ENSUPAG00010004612) #27	LRRC75B (ENSUPAG00010004607) #28	ENSUPAG00010004577 #29	ENSUPAG00010004571 #30	GGT5 (ENSUPAG00010004553) #31	SUSD2 (ENSUPAG00010004527) #32	CABIN1 (ENSUPAG00010004283) #33	ENSUPAG00010004270 #34	ENSUPAG00010004262 #35	ENSUPAG00010004256 #36	ENSUPAG00010004232 #37
Squirrel	MODERN SPECIES	219												ENSSTOG00000021638 #18	GNAZ (ENSSTOG00000014033) #19	ENSSTOG00000008429 #20	RAB36 (ENSSTOG00000008444) #21	BCR (ENSSTOG00000008468) #22	SPECC1L (ENSSTOG00000000157) #23	ADORA2A (ENSSTOG00000019368) #24	UPB1 (ENSSTOG00000000161) #25	GUCD1 (ENSSTOG00000000165) #26	SNRPD3 (ENSSTOG00000025674) #27	LRRC75B (ENSSTOG00000032043) #28	ENSSTOG00000014350 #29	GGT5 (ENSSTOG00000022400) #31	ENSSTOG00000032130 ##30	SUSD2 (ENSSTOG00000011833) #32	CABIN1 (ENSSTOG00000011791) #33	ENSSTOG00000034559 #35	ENSSTOG00000011785 #36	ENSSTOG00000003054 #37	GSTT4 (ENSSTOG00000006561)
Alpin marmot	MODERN SPECIES	67	TRPV4 (ENSMMMG00000024357)	ENSMMMG00000024375	ENSMMMG00000024378	ENSMMMG00000024380	GIT2 (ENSMMMG00000024385)	ANKRD13A (ENSMMMG00000024412)	ENSMMMG00000024414	ENSMMMG00000024415	PIWIL3 (ENSMMMG00000024418)	ENSMMMG00000024426	ENSMMMG00000024427	ENSMMMG00000024429 #18	RSPH14 (ENSMMMG00000024432) #20	GNAZ (ENSMMMG00000024434) #19	RAB36 (ENSMMMG00000024435) #21	BCR (ENSMMMG00000024436) #22	SPECC1L (ENSMMMG00000024437) #23	ADORA2A (ENSMMMG00000024438) #24	UPB1 (ENSMMMG00000024439) #25	GUCD1 (ENSMMMG00000024440) #26	SNRPD3 (ENSMMMG00000024441) #27	LRRC75B (ENSMMMG00000024443) #28	ENSMMMG00000024444 #29	GGT5 (ENSMMMG00000024445) #31	SUSD2 (ENSMMMG00000000013) #32	CABIN1 (ENSMMMG00000000021) #33	ENSMMMG00000000042 #34	ENSMMMG00000000052 #35	ENSMMMG00000000067 #36	ENSMMMG00000000070 #37	GSTT4 (ENSMMMG00000000110)
Eurasian red squirrel	MODERN SPECIES	17	ENSSVLG00005016541	ENSSVLG00005016561	ENSSVLG00005016602	ENSSVLG00005016645	ENSSVLG00005016666	ENSSVLG00005004629	ENSSVLG00005004660	ENSSVLG00005004674	ENSSVLG00005004682	ENSSVLG00005004698	ENSSVLG00005004725	ENSSVLG00005004761 #18	RSPH14 (ENSSVLG00005004828) #20	GNAZ (ENSSVLG00005004858) #19	RAB36 (ENSSVLG00005004911) #21	BCR (ENSSVLG00005004988) #22	ENSSVLG00005005044	SPECC1L (ENSSVLG00005005084) #23	ADORA2A (ENSSVLG00005005154) #24	UPB1 (ENSSVLG00005005173) #25	GUCD1 (ENSSVLG00005005243) #26	SNRPD3 (ENSSVLG00005005327) #27	LRRC75B (ENSSVLG00005005370) #28	ENSSVLG00005005413 #29	GGT5 (ENSSVLG00005005644) #31	ENSSVLG00005005852	SUSD2 (ENSSVLG00005005881) #32	CABIN1 (ENSSVLG00005006001) #33	ENSSVLG00005006131	ENSSVLG00005006177 #35	ENSSVLG00005006193 ##36
Hystricomorpha	ANCESTRAL SPECIES		ENSGT00940000163781	ENSGT00940000161054	ENSGT00940000165289	ENSGT01030000234531.A.b.b.a	ENSGT00940000154179	ENSGT00940000153120.k.a.a	ENSGT00940000162558.i	ENSGT00940000153120.k.b	ENSGT00940000153120.k.a.b.a	ENSGT00940000162558.j	ENSGT00940000153307.d.b	ENSGT00940000163531 #18	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156366.b ##36	ENSGT00940000156366.a.b #37	ENSGT00940000161301	ENSGT00940000162786	ENSGT00940000155608
Hystricomorpha_a	ANCESTRAL SPECIES	2	ENSGT00940000160846.d	ENSGT00940000153520.d.b.b	ENSGT00940000153934.a.b	ENSGT00940000163781	ENSGT00940000161054	ENSGT01030000234531.A.b.b.a	ENSGT00940000154179	ENSGT00940000153120.k.a.a	ENSGT00940000162558.i	ENSGT00940000153120.k.b	ENSGT00940000153307.d.b	ENSGT00940000163531 #18	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156366.b ##36	ENSGT00940000156366.a.b #37	ENSGT00940000161301	ENSGT00940000162786	ENSGT00940000155608
Hystricomorpha_b	ANCESTRAL SPECIES	1	ENSGT00390000016559	ENSGT01090000260061.c.a.c.b	ENSGT00940000155844	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000153520.d.b.b	ENSGT00940000153934.a.b	ENSGT00940000163781	ENSGT00940000161054	ENSGT01030000234531.A.b.a	ENSGT00940000162558.j	ENSGT00940000163531 #18	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156366.b ##36	ENSGT00940000156366.a.b #37	ENSGT00940000161301	ENSGT00940000155608	ENSGT00940000161061.b
Long-tailed chinchilla	MODERN SPECIES	162	IGLV9-49 (ENSCLAG00000009789)	ZNF280B (ENSCLAG00000017839)	PRAME (ENSCLAG00000007647)	ENSCLAG00000009543	ENSCLAG00000009737	ENSCLAG00000011321	ENSCLAG00000016149	IGLV3-1 (ENSCLAG00000007681)	ENSCLAG00000008646	ENSCLAG00000009902	ENSCLAG00000014380	ENSCLAG00000009100 #18	RSPH14 (ENSCLAG00000007632) #20	GNAZ (ENSCLAG00000010101) #19	RAB36 (ENSCLAG00000010317) #21	BCR (ENSCLAG00000010442) #22	SPECC1L (ENSCLAG00000008544) #23	ADORA2A (ENSCLAG00000009130) #24	UPB1 (ENSCLAG00000010001) #25	GUCD1 (ENSCLAG00000010734) #26	SNRPD3 (ENSCLAG00000011403) #27	LRRC75B (ENSCLAG00000012160) #28	ENSCLAG00000011279 #29	GGT5 (ENSCLAG00000007957) #31	SUSD2 (ENSCLAG00000011078) #32	CABIN1 (ENSCLAG00000007869) #33	ENSCLAG00000013010 ##36	ENSCLAG00000015172	ENSCLAG00000008091 #37	GSTT4 (ENSCLAG00000008513)	MIF (ENSCLAG00000009103)
Degu	MODERN SPECIES	120					ENSODEG00000008043	ENSODEG00000009130	ZNF280B (ENSODEG00000008862)	ENSODEG00000008573	ENSODEG00000008516	ENSODEG00000007716	ENSODEG00000007698	GNAZ (ENSODEG00000008736) #19	RSPH14 (ENSODEG00000007681) #20	ENSODEG00000019488	RAB36 (ENSODEG00000009016) #21	BCR (ENSODEG00000009004) #22	ENSODEG00000007642	ENSODEG00000019487	ENSODEG00000007297	SPECC1L (ENSODEG00000008131) #23	ADORA2A (ENSODEG00000009102) #24	ENSODEG00000019780	UPB1 (ENSODEG00000008169) #25	GUCD1 (ENSODEG00000009190) #26	SNRPD3 (ENSODEG00000008064) #27	LRRC75B (ENSODEG00000007792) #28	ENSODEG00000012141 #29	GGT5 (ENSODEG00000008164) #31	SUSD2 (ENSODEG00000008082) #32	CABIN1 (ENSODEG00000007920) #33	ENSODEG00000007409 ##36
Guinea pig	MODERN SPECIES	4	ENSCPOG00000031212	ENSCPOG00000030272	ENSCPOG00000035052	ENSCPOG00000033246	ENSCPOG00000035778	ENSCPOG00000030135	ENSCPOG00000034418	ENSCPOG00000040633	ENSCPOG00000032901	ENSCPOG00000037674	ENSCPOG00000037725	ENSCPOG00000023038 #18	GNAZ (ENSCPOG00000033926) #19	RSPH14 (ENSCPOG00000011500) #20	RAB36 (ENSCPOG00000011501) #21	BCR (ENSCPOG00000021817) #22	SPECC1L (ENSCPOG00000007308) #23	ADORA2A (ENSCPOG00000006104) #24	UPB1 (ENSCPOG00000003919) #25	GUCD1 (ENSCPOG00000030584) #26	SNRPD3 (ENSCPOG00000033102) #27	LRRC75B (ENSCPOG00000030691) #28	ENSCPOG00000008956 #29	GGT5 (ENSCPOG00000008003) #31	SUSD2 (ENSCPOG00000012834) #32	CABIN1 (ENSCPOG00000010872) #33	ENSCPOG00000036578 ##36	ENSCPOG00000004068 #37	GSTT4 (ENSCPOG00000019914)	ENSCPOG00000033118	MIF (ENSCPOG00000033496)
Naked mole-rat female	MODERN SPECIES	15	PRAME (ENSHGLG00000010699)	ENSHGLG00000045068	ENSHGLG00000010950	ENSHGLG00000049213	ENSHGLG00000006569	ENSHGLG00000029990	ENSHGLG00000045591	ENSHGLG00000048461	IGLV3-9 (ENSHGLG00000044834)	ENSHGLG00000047661	ENSHGLG00000015677	ENSHGLG00000009410 #18	GNAZ (ENSHGLG00000011460) #19	RSPH14 (ENSHGLG00000011976) #20	ENSHGLG00000009476 #21	ENSHGLG00000010295 #22	ENSHGLG00000011969 #23	ADORA2A (ENSHGLG00000032320) #24	UPB1 (ENSHGLG00000014750) #25	GUCD1 (ENSHGLG00000037847) #26	SNRPD3 (ENSHGLG00000044971) #27	ENSHGLG00000046145	LRRC75B (ENSHGLG00000016897) #28	ENSHGLG00000019551 #29	ENSHGLG00000018936 #31	SUSD2 (ENSHGLG00000009484) #32	CABIN1 (ENSHGLG00000010286) #33	ENSHGLG00000035410	ENSHGLG00000011840 #37	Mif (ENSHGLG00000041245)	SLC2A11 (ENSHGLG00000018680)
Rodentia_B	ANCESTRAL SPECIES	22												ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT01000000215173	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301	ENSGT00940000162786
Kangaroo rat	MODERN SPECIES	342														ENSDORG00000024688 #20	Rab36 (ENSDORG00000005225) #21	Bcr (ENSDORG00000005230) #22	Specc1l (ENSDORG00000025097) #23	Upb1 (ENSDORG00000015703) #25	Gucd1 (ENSDORG00000027119) #26	Lrrc75b (ENSDORG00000015984) #28	Ggt1 (ENSDORG00000009513) #29	Ggt5 (ENSDORG00000003356) #31	Susd2 (ENSDORG00000000076) #32	Cabin1 (ENSDORG00000000073) #33	Ddt (ENSDORG00000007138) #34	Gstt3 (ENSDORG00000029140) #36	Gstt1 (ENSDORG00000007140) #37	Gstt4 (ENSDORG00000025436)	Mif (ENSDORG00000028642)	ENSDORG00000000257	Derl3 (ENSDORG00000026998)
Myomorpha	ANCESTRAL SPECIES	47												ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT01000000215173	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301	ENSGT00940000162786
Lesser Egyptian jerboa	MODERN SPECIES	258												Nrsn1 (ENSJJAG00000010563)	ENSJJAG00000010811 #20	Gnaz (ENSJJAG00000010986) #19	Rab36 (ENSJJAG00000011100) #21	Bcr (ENSJJAG00000011614) #22	Specc1l (ENSJJAG00000013694) #23	Adora2a (ENSJJAG00000008458) #24	Upb1 (ENSJJAG00000009680) #25
Muroidea	ANCESTRAL SPECIES	39												ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT01000000215173	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301	ENSGT00940000162786
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT01000000215173	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301	ENSGT00940000162786
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00390000013594	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301	ENSGT00940000162786
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00940000154939	ENSGT00390000013594	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301	ENSGT00940000162786
Chinese hamster chok1gshd	MODERN SPECIES	204	Ccdc6 (ENSCGRG00001018896)	Slc16a9 (ENSCGRG00001024424)	Fam13c (ENSCGRG00001012101)	Phyhipl (ENSCGRG00001024883)	ENSCGRG00001017942	Bicc1 (ENSCGRG00001019138)	Tfam (ENSCGRG00001019324)	Ube2d1 (ENSCGRG00001016170)	Cisd1 (ENSCGRG00001016658)	Ipmk (ENSCGRG00001005219)	Zwint (ENSCGRG00001021808)	Pcdh15 (ENSCGRG00001022598)	Gnaz (ENSCGRG00001018902) #19	Rsph14 (ENSCGRG00001016126) #20	Rab36 (ENSCGRG00001015715) #21	Bcr (ENSCGRG00001023944) #22	Specc1l (ENSCGRG00001021028) #23	Adora2a (ENSCGRG00001010977) #24	Upb1 (ENSCGRG00001019047) #25	Gucd1 (ENSCGRG00001000582) #26	Snrpd3 (ENSCGRG00001021990) #27	Lrrc75b (ENSCGRG00001003802) #28	Ggt1 (ENSCGRG00001022481) #29	Ggt5 (ENSCGRG00001017907) #31	Susd2 (ENSCGRG00001003206) #32	Cabin1 (ENSCGRG00001004164) #33	Ddt (ENSCGRG00001021501) #34	Gstt3 (ENSCGRG00001006075) #36	Gstt1 (ENSCGRG00001016727) #37	Gstt4 (ENSCGRG00001012558)	Gstt2 (ENSCGRG00001012995)
Golden Hamster	MODERN SPECIES	641	Cdk1 (ENSMAUG00000020301)	ENSMAUG00000014771	Ccdc6 (ENSMAUG00000005713)	ENSMAUG00000021326	Fam13c (ENSMAUG00000021595)	Phyhipl (ENSMAUG00000017391)	Bicc1 (ENSMAUG00000018772)	Ube2d1 (ENSMAUG00000022226)	Cisd1 (ENSMAUG00000018518)	Ipmk (ENSMAUG00000017876)	Zwint (ENSMAUG00000014328)	Pcdh15 (ENSMAUG00000022156)	Gnaz (ENSMAUG00000017932) #19	Rsph14 (ENSMAUG00000020248) #20	Rab36 (ENSMAUG00000016039) #21	Bcr (ENSMAUG00000015449) #22	Specc1l (ENSMAUG00000013399) #23	Adora2a (ENSMAUG00000015630) #24	Upb1 (ENSMAUG00000015089) #25	Gucd1 (ENSMAUG00000018270) #26	Snrpd3 (ENSMAUG00000021393) #27	Lrrc75b (ENSMAUG00000015122) #28	Ggt1 (ENSMAUG00000012488) #29	Ggt5 (ENSMAUG00000014824) #31	Susd2 (ENSMAUG00000016234) #32	Cabin1 (ENSMAUG00000018400) #33	Ddt (ENSMAUG00000015761) #34	Gstt3 (ENSMAUG00000015468) #36	Gstt1 (ENSMAUG00000020425) #37	Gstt4 (ENSMAUG00000010826)	ENSMAUG00000002603
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00390000013594	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301	ENSGT00940000162786
Northern American deer mouse	MODERN SPECIES	13	Slc16a9 (ENSPEMG00000021460)	ENSPEMG00000022127	Phyhipl (ENSPEMG00000028955)	Bicc1 (ENSPEMG00000014055)	Tfam (ENSPEMG00000023051)	Ube2d1 (ENSPEMG00000023311)	Cisd1 (ENSPEMG00000024036)	Ipmk (ENSPEMG00000031156)	Zwint (ENSPEMG00000023971)	ENSPEMG00000005644	ENSPEMG00000026333	Pcdh15 (ENSPEMG00000015685)	Gnaz (ENSPEMG00000015875) #19	Rsph14 (ENSPEMG00000017302) #20	Rab36 (ENSPEMG00000023681) #21	Bcr (ENSPEMG00000015772) #22	Specc1l (ENSPEMG00000024031) #23	Adora2a (ENSPEMG00000031022) #24	Upb1 (ENSPEMG00000002429) #25	Gucd1 (ENSPEMG00000026388) #26	ENSPEMG00000027500 #27	Lrrc75b (ENSPEMG00000014522) #28	Ggt1 (ENSPEMG00000023479) #29	ENSPEMG00000028844	Susd2 (ENSPEMG00000007530) #32	Cabin1 (ENSPEMG00000002448) #33	Ddt (ENSPEMG00000010371) #34	Gstt3 (ENSPEMG00000024686) #36	Gstt1 (ENSPEMG00000007647) #37	Gstt4 (ENSPEMG00000003858)	Gstt2 (ENSPEMG00000011446)
Prairie vole	MODERN SPECIES	352	Slc16a9 (ENSMOCG00000012040)	Fam13c (ENSMOCG00000013312)	Phyhipl (ENSMOCG00000016827)	Bicc1 (ENSMOCG00000020143)	Tfam (ENSMOCG00000014572)	Ube2d1 (ENSMOCG00000017517)	ENSMOCG00000018182	Cisd1 (ENSMOCG00000020184)	Ipmk (ENSMOCG00000022528)	Zwint (ENSMOCG00000004585)	ENSMOCG00000014966	Pcdh15 (ENSMOCG00000020866)	Rsph14 (ENSMOCG00000022421) #20	Gnaz (ENSMOCG00000001656) #19	Rab36 (ENSMOCG00000004529) #21	Bcr (ENSMOCG00000020282) #22	Specc1l (ENSMOCG00000005316) #23	Adora2a (ENSMOCG00000017735) #24	ENSMOCG00000002560	Upb1 (ENSMOCG00000004437) #25	Gucd1 (ENSMOCG00000008085) #26	Snrpd3 (ENSMOCG00000009361) #27	Lrrc75b (ENSMOCG00000010899) #28	Ggt1 (ENSMOCG00000018954) #29	Ggt5 (ENSMOCG00000022852) #31	Susd2 (ENSMOCG00000007836) #32	ENSMOCG00000014877 #33	ENSMOCG00000015205 #33	ENSMOCG00000007362 #34	Gstt3 (ENSMOCG00000014623) #36	Gstt1 (ENSMOCG00000008904) #37
Murinae	ANCESTRAL SPECIES	18	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT01000000215173	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301	ENSGT00940000162786
Mus	ANCESTRAL SPECIES	15	ENSGT00390000013594	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a.b #36	ENSGT00940000156366.a.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301
Mus_A	ANCESTRAL SPECIES	11	ENSGT00390000013594	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a.b #36	ENSGT00940000156366.a.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301
Ryukyu mouse	MODERN SPECIES	1	Ccdc6 (MGP_CAROLIEiJ_G0015421)	Slc16a9 (MGP_CAROLIEiJ_G0015422)	Fam13c (MGP_CAROLIEiJ_G0015423)	Phyhipl (MGP_CAROLIEiJ_G0015424)	MGP_CAROLIEiJ_G0015425	Bicc1 (MGP_CAROLIEiJ_G0015426)	Tfam (MGP_CAROLIEiJ_G0015427)	Ube2d1 (MGP_CAROLIEiJ_G0015428)	Cisd1 (MGP_CAROLIEiJ_G0015429)	Ipmk (MGP_CAROLIEiJ_G0015430)	Zwint (MGP_CAROLIEiJ_G0015431)	Pcdh15 (MGP_CAROLIEiJ_G0015432)	Rsph14 (MGP_CAROLIEiJ_G0015433) #20	Gnaz (MGP_CAROLIEiJ_G0015434) #19	Rab36 (MGP_CAROLIEiJ_G0015435) #21	Bcr (MGP_CAROLIEiJ_G0015436) #22	Specc1l (MGP_CAROLIEiJ_G0015437) #23	Adora2a (MGP_CAROLIEiJ_G0015438) #24	Gucd1 (MGP_CAROLIEiJ_G0015439) #26	Upb1 (MGP_CAROLIEiJ_G0015440) #25	Snrpd3 (MGP_CAROLIEiJ_G0015441) #27	Lrrc75b (MGP_CAROLIEiJ_G0015442) #28	Ggt1 (MGP_CAROLIEiJ_G0015443) #29	Ggt5 (MGP_CAROLIEiJ_G0015444) #31	Susd2 (MGP_CAROLIEiJ_G0015445) #32	Cabin1 (MGP_CAROLIEiJ_G0015446) #33	Ddt (MGP_CAROLIEiJ_G0015447) #34	MGP_CAROLIEiJ_G0015448 #36	Gstt3 (MGP_CAROLIEiJ_G0015449) #36	Gstt1 (MGP_CAROLIEiJ_G0015450) #37	Gstt4 (MGP_CAROLIEiJ_G0015451)
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000013594	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a.b #36	ENSGT00940000156366.a.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301
Mouse	MODERN SPECIES	1	Ccdc6 (ENSMUSG00000048701)	Mrln (ENSMUSG00000019933)	Slc16a9 (ENSMUSG00000037762)	Fam13c (ENSMUSG00000043259)	Phyhipl (ENSMUSG00000037747)	Bicc1 (ENSMUSG00000014329)	Tfam (ENSMUSG00000003923)	Ube2d1 (ENSMUSG00000019927)	Cisd1 (ENSMUSG00000037710)	Ipmk (ENSMUSG00000060733)	Zwint (ENSMUSG00000019923)	Pcdh15 (ENSMUSG00000052613)	Rsph14 (ENSMUSG00000009070) #20	Gnaz (ENSMUSG00000040009) #19	Rab36 (ENSMUSG00000020175) #21	Bcr (ENSMUSG00000009681) #22	Specc1l (ENSMUSG00000033444) #23	Adora2a (ENSMUSG00000020178) #24	Gucd1 (ENSMUSG00000033416) #26	Upb1 (ENSMUSG00000033427) #25	Snrpd3 (ENSMUSG00000020180) #27	Lrrc75b (ENSMUSG00000046807) #28	Ggt1 (ENSMUSG00000006345) #29	Ggt5 (ENSMUSG00000006344) #31	Susd2 (ENSMUSG00000006342) #32	Cabin1 (ENSMUSG00000020196) #33	Ddt (ENSMUSG00000001666) #34	Gm20441 (ENSMUSG00000092360)	Gstt3 (ENSMUSG00000001665) #36	Gstt1 (ENSMUSG00000001663) #37	Gstt4 (ENSMUSG00000009093)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000013594	ENSGT01030000235256	ENSGT00940000156416	ENSGT00950000183033.a.a.d	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b	ENSGT00940000154445	ENSGT00940000155309	ENSGT00390000017639	ENSGT00940000156675	ENSGT00940000160353 #19	ENSGT00500000044989 #20	ENSGT00940000159687 #21	ENSGT00940000153491.b.a #22	ENSGT00940000153592.B.b.b #23	ENSGT01030000234555.a.a.a.c.b #24	ENSGT00390000004906 #25	ENSGT00390000000571 #26	ENSGT00610000086153 #27	ENSGT00940000162815 #28	ENSGT00940000154601 #29	ENSGT00940000155794 #31	ENSGT00730000110943.B #32	ENSGT00390000008529 #33	ENSGT00940000156821 #34	ENSGT00940000156366.a.a.b #36	ENSGT00940000156366.a.a.a #36	ENSGT00940000156366.a.b #37	ENSGT00940000161301
spretus	MODERN SPECIES	1	Slc16a9 (MGP_SPRETEiJ_G0016234)	Fam13c (MGP_SPRETEiJ_G0016235)	Phyhipl (MGP_SPRETEiJ_G0016236)	MGP_SPRETEiJ_G0016237	MGP_SPRETEiJ_G0016238	Bicc1 (MGP_SPRETEiJ_G0016239)	Tfam (MGP_SPRETEiJ_G0016240)	Ube2d1 (MGP_SPRETEiJ_G0016241)	Cisd1 (MGP_SPRETEiJ_G0016242)	Ipmk (MGP_SPRETEiJ_G0016243)	Zwint (MGP_SPRETEiJ_G0016244)	Pcdh15 (MGP_SPRETEiJ_G0016245)	Rsph14 (MGP_SPRETEiJ_G0016246) #20	Gnaz (MGP_SPRETEiJ_G0016247) #19	Rab36 (MGP_SPRETEiJ_G0016248) #21	Bcr (MGP_SPRETEiJ_G0016249) #22	Specc1l (MGP_SPRETEiJ_G0016250) #23	Adora2a (MGP_SPRETEiJ_G0016251) #24	Gucd1 (MGP_SPRETEiJ_G0016252) #26	Upb1 (MGP_SPRETEiJ_G0016253) #25	Snrpd3 (MGP_SPRETEiJ_G0016254) #27	Lrrc75b (MGP_SPRETEiJ_G0016255) #28	Ggt1 (MGP_SPRETEiJ_G0016256) #29	Ggt5 (MGP_SPRETEiJ_G0016257) #31	Susd2 (MGP_SPRETEiJ_G0016258) #32	Cabin1 (MGP_SPRETEiJ_G0016259) #33	Ddt (MGP_SPRETEiJ_G0016260) #34	MGP_SPRETEiJ_G0016261 #36	Gstt3 (MGP_SPRETEiJ_G0016262) #36	Gstt1 (MGP_SPRETEiJ_G0016263) #37	Gstt4 (MGP_SPRETEiJ_G0016264)
Steppe mouse	MODERN SPECIES	2997												ENSMSIG00000019007	Gnaz (ENSMSIG00000018982) #19	Rsph14 (ENSMSIG00000018882) #20	Rab36 (ENSMSIG00000018821) #21	ENSMSIG00000006554 #22	Specc1l (ENSMSIG00000006141) #23	Adora2a (ENSMSIG00000006083) #24	Upb1 (ENSMSIG00000006025) #25	ENSMSIG00000005965 #26	Snrpd3 (ENSMSIG00000005945) #27	Lrrc75b (ENSMSIG00000005914) #28	Ggt1 (ENSMSIG00000005782) #29	Ggt5 (ENSMSIG00000005737) #31	Susd2 (ENSMSIG00000005634) #32	Cabin1 (ENSMSIG00000005480) #33	ENSMSIG00000005444 #34	Gstt1 (ENSMSIG00000005326) #37	Gstt4 (ENSMSIG00000005311)	Gstt2 (ENSMSIG00000005282)	ENSMSIG00000005270
Shrew mouse	MODERN SPECIES	22	Ccdc6 (MGP_PahariEiJ_G0030837)	Slc16a9 (MGP_PahariEiJ_G0030838)	Fam13c (MGP_PahariEiJ_G0030839)	Phyhipl (MGP_PahariEiJ_G0030840)	MGP_PahariEiJ_G0030841	Bicc1 (MGP_PahariEiJ_G0030842)	Tfam (MGP_PahariEiJ_G0030843)	Ube2d1 (MGP_PahariEiJ_G0030844)	Cisd1 (MGP_PahariEiJ_G0030845)	Ipmk (MGP_PahariEiJ_G0030846)	Zwint (MGP_PahariEiJ_G0030847)	Pcdh15 (MGP_PahariEiJ_G0030848)	Rsph14 (MGP_PahariEiJ_G0030849) #20	Gnaz (MGP_PahariEiJ_G0030850) #19	Rab36 (MGP_PahariEiJ_G0030851) #21	Bcr (MGP_PahariEiJ_G0030852) #22	Specc1l (MGP_PahariEiJ_G0030853) #23	Adora2a (MGP_PahariEiJ_G0030854) #24	Gucd1 (MGP_PahariEiJ_G0030855) #26	Upb1 (MGP_PahariEiJ_G0030856) #25	Snrpd3 (MGP_PahariEiJ_G0030857) #27	Lrrc75b (MGP_PahariEiJ_G0030858) #28	Ggt1 (MGP_PahariEiJ_G0030859) #29	Ggt5 (MGP_PahariEiJ_G0030860) #31	Susd2 (MGP_PahariEiJ_G0030861) #32	Cabin1 (MGP_PahariEiJ_G0030862) #33	Ddt (MGP_PahariEiJ_G0030863) #34	MGP_PahariEiJ_G0030864 #36	Gstt3 (MGP_PahariEiJ_G0030865) #36	Gstt1 (MGP_PahariEiJ_G0030866) #37	Gstt4 (MGP_PahariEiJ_G0030867)
Rat	MODERN SPECIES	12	ENSRNOG00000067041	Tfam (ENSRNOG00000000613)	Ube2d1 (ENSRNOG00000000611)	Cisd1 (ENSRNOG00000000610)	Rpl39-ps11 (ENSRNOG00000048073)	Ipmk (ENSRNOG00000000609)	AABR07044714.1 (ENSRNOG00000053936)	RGD1559903 (ENSRNOG00000000607)	Zwint (ENSRNOG00000048682)	Pcdh15 (ENSRNOG00000000606)	Rpl9-ps20 (ENSRNOG00000068097)	Gnaz (ENSRNOG00000001313) #19	Rsph14 (ENSRNOG00000001315) #20	Rab36 (ENSRNOG00000001311) #21	ENSRNOG00000068163	Bcr (ENSRNOG00000001304) #22	Specc1l (ENSRNOG00000001303) #23	Adora2a (ENSRNOG00000001302) #24	Upb1 (ENSRNOG00000038258) #25	Gucd1 (ENSRNOG00000049952) #26	Snrpd3 (ENSRNOG00000050410) #27	Lrrc75b (ENSRNOG00000046428) #28	Ggt1 (ENSRNOG00000047697) #29	AABR07044631.2 (ENSRNOG00000062276) #31	Susd2 (ENSRNOG00000033389) #32	Cabin1 (ENSRNOG00000001237) #33	Ddt (ENSRNOG00000068887) #34	Gstt3 (ENSRNOG00000001242) #36	Gstt1 (ENSRNOG00000049771) #37	Gstt4 (ENSRNOG00000038300)	LOC108353424 (ENSRNOG00000030242)
Upper Galilee mountains blind mole rat	MODERN SPECIES	855													Gnaz (ENSNGAG00000011493) #19	ENSNGAG00000006479 #20	Rab36 (ENSNGAG00000016512) #21	ENSNGAG00000002532 #22