Sarcopterygii	ANCESTRAL SPECIES	246									ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000163785.a.a.b	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000165419	ENSGT00450000040262 #27	ENSGT00390000016607.b #28	ENSGT01030000234515.a.b.a.a #30	ENSGT00940000157471 #31
Tetrapoda	ANCESTRAL SPECIES	106										ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000161723 #26	ENSGT00450000040262 #27	ENSGT00390000016607.b #28	ENSGT01030000234515.a.b.a.a #30	ENSGT00940000157471 #31	ENSGT00940000157585 #33	ENSGT00940000157759 #34	ENSGT00940000155176 #35	ENSGT00390000018130.a.a.a #36	ENSGT00390000007153.a.b #37	ENSGT00950000183103.d.a.a	ENSGT00940000155413
Amniota	ANCESTRAL SPECIES	28	ENSGT01050000244970.a	ENSGT00940000175972	ENSGT00550000074892 #10	ENSGT00940000165572 #11	ENSGT00940000156524 #12	ENSGT00960000189065 #13	ENSGT00530000064050 #14	ENSGT00990000206813	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000161723 #26	ENSGT00450000040262 #27	ENSGT00390000016607.b #28	ENSGT00940000161835 #29	ENSGT01030000234515.a.b.a.a #30	ENSGT00940000157471 #31	ENSGT00940000157585 #33	ENSGT00940000157759 #34	ENSGT00940000155176 #35	ENSGT00390000018130.a.a.a #36	ENSGT00390000007153.a.b #37	ENSGT00950000183103.d.a.a
Sauria	ANCESTRAL SPECIES	28	ENSGT00940000175972	ENSGT00390000014244.kb	ENSGT00550000074892 #10	ENSGT00940000165572 #11	ENSGT00940000156524 #12	ENSGT00960000189065 #13	ENSGT00530000064050 #14	ENSGT00990000206813	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000161723 #26	ENSGT00450000040262 #27	ENSGT00390000016607.b #28	ENSGT00940000161835 #29	ENSGT01030000234515.a.b.a.a #30	ENSGT00940000157471 #31	ENSGT01040000240780 #32	ENSGT00940000157585 #33	ENSGT00940000157759 #34	ENSGT00940000155176 #35	ENSGT00390000018130.a.a.a #36	ENSGT00390000007153.a.b #37
Lepidosauria	ANCESTRAL SPECIES	36	ENSGT00940000159348.e #7	ENSGT00390000006215 #8	ENSGT00940000161136 #9	ENSGT00550000074892 #10	ENSGT00940000165572 #11	ENSGT00940000156524 #12	ENSGT00960000189065 #13	ENSGT00530000064050 #14	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000161723 #26	ENSGT00450000040262 #27	ENSGT00390000016607.b #28	ENSGT00940000161835 #29	ENSGT01030000234515.a.b.a.a #30	ENSGT00940000157471 #31	ENSGT01040000240780 #32	ENSGT00940000157585 #33	ENSGT00940000157759 #34	ENSGT00940000155176 #35	ENSGT00390000018130.a.a.a #36	ENSGT00390000007153.a.b #37
Episquamata	ANCESTRAL SPECIES	17	ENSGT00940000159348.e #7	ENSGT00390000006215 #8	ENSGT00940000161136 #9	ENSGT00550000074892 #10	ENSGT00940000165572 #11	ENSGT00940000156524 #12	ENSGT00960000189065 #13	ENSGT00530000064050 #14	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000161723 #26	ENSGT00450000040262 #27	ENSGT00390000016607.b #28	ENSGT00940000161835 #29	ENSGT01030000234515.a.b.a.a #30	ENSGT00940000157471 #31	ENSGT01040000240780 #32	ENSGT00940000157585 #33	ENSGT00940000157759 #34	ENSGT00940000155176 #35	ENSGT00390000018130.a.a.a #36	ENSGT00390000007153.a.b #37
Laterata	ANCESTRAL SPECIES	35	ENSGT00940000159348.e #7	ENSGT00390000006215 #8	ENSGT00940000161136 #9	ENSGT00550000074892 #10	ENSGT00940000165572 #11	ENSGT00940000156524 #12	ENSGT00960000189065 #13	ENSGT00530000064050 #14	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000161723 #26	ENSGT00450000040262 #27	ENSGT00390000016607.b #28	ENSGT00940000161835 #29	ENSGT01030000234515.a.b.a.a #30	ENSGT00940000157471 #31	ENSGT01040000240780 #32	ENSGT00940000157585 #33	ENSGT00940000157759 #34	ENSGT00940000155176 #35	ENSGT00390000018130.a.a.a #36	ENSGT00390000007153.a.b #37
Common wall lizard	MODERN SPECIES	7	ENSPMRG00000017746	ENSPMRG00000017740	PI4KB (ENSPMRG00000017725) #10	ENSPMRG00000016787 #11	ZNF687 (ENSPMRG00000016622) #12	ENSPMRG00000016613 #13	PSMD4 (ENSPMRG00000016603) #14	PIP5K1A (ENSPMRG00000016574) #15	VPS72 (ENSPMRG00000016565) #16	TMOD4 (ENSPMRG00000016561) #17	SCNM1 (ENSPMRG00000016554) #18	LYSMD1 (ENSPMRG00000016550) #19	TNFAIP8L2 (ENSPMRG00000016547) #20	ENSPMRG00000016544	SEMA6C (ENSPMRG00000016528) #21	ENSPMRG00000016518 #22	GABPB2 (ENSPMRG00000016512) #23	MLLT11 (ENSPMRG00000016508) #24	CDC42SE1 (ENSPMRG00000016504) #25	BNIPL (ENSPMRG00000016496) #26	PRUNE1 (ENSPMRG00000016487) #27	MINDY1 (ENSPMRG00000021029) #28	ENSPMRG00000021015 #29	ENSPMRG00000021009	CERS2 (ENSPMRG00000021000) #30	SETDB1 (ENSPMRG00000020991) #31	ENSPMRG00000020987 #32	ARNT (ENSPMRG00000020956) #33	CTSK (ENSPMRG00000020943) #34	CTSS (ENSPMRG00000020938) #35	HORMAD1 (ENSPMRG00000020931) #36
Argentine black and white tegu	MODERN SPECIES	80	SYVN1 (ENSSMRG00000021185)	SPDYC (ENSSMRG00000021186)	CAPN1 (ENSSMRG00000021187)	ENSSMRG00000021188	ENSSMRG00000021190	ENSSMRG00000021191	ENSSMRG00000021192	DUSP23 (ENSSMRG00000021193)	IGSF9 (ENSSMRG00000021194)	TAGLN2 (ENSSMRG00000021195)	CFAP45 (ENSSMRG00000021196)	ENSSMRG00000021197	ENSSMRG00000021199	ENSSMRG00000021202	SEMA6C (ENSSMRG00000021205) #21	ENSSMRG00000021217 #22	GABPB2 (ENSSMRG00000021219) #23	ENSSMRG00000021221 #24	CDC42SE1 (ENSSMRG00000021222) #25	BNIPL (ENSSMRG00000021224) #26	PRUNE1 (ENSSMRG00000021226) #27	MINDY1 (ENSSMRG00000021229) #28	ENSSMRG00000021231 #29	CERS2 (ENSSMRG00000021232) #30	SETDB1 (ENSSMRG00000021234) #31	ARNT (ENSSMRG00000021235) #33	CTSK (ENSSMRG00000021238) #34	CTSS (ENSSMRG00000021239) #35	HORMAD1 (ENSSMRG00000021241) #36	GOLPH3L (ENSSMRG00000021243) #37	ENSSMRG00000021244
Toxicofera	ANCESTRAL SPECIES	27	ENSGT00950000183094.a	ENSGT00940000159348.e #7	ENSGT00390000006215 #8	ENSGT00940000161136 #9	ENSGT00550000074892 #10	ENSGT00940000165572 #11	ENSGT00940000156524 #12	ENSGT00530000064050 #14	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000161723 #26	ENSGT00450000040262 #27	ENSGT00390000016607.b #28	ENSGT00940000161835 #29	ENSGT01030000234515.a.b.a.a #30	ENSGT00940000157471 #31	ENSGT01040000240780 #32	ENSGT00940000157585 #33	ENSGT00940000157759 #34	ENSGT00940000155176 #35	ENSGT00390000018130.a.a.a #36	ENSGT00390000007153.a.b #37
Elapidae	ANCESTRAL SPECIES	25	ENSGT00950000183094.a	ENSGT00940000159348.e #7	ENSGT00390000006215 #8	ENSGT00940000161136 #9	ENSGT00550000074892 #10	ENSGT00940000165572 #11	ENSGT00940000156524 #12	ENSGT00530000064050 #14	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000161723 #26	ENSGT00450000040262 #27	ENSGT00390000016607.b #28	ENSGT00940000161835 #29	ENSGT01030000234515.a.b.a.a #30	ENSGT00940000157471 #31	ENSGT00940000157585 #33	ENSGT00940000157759 #34	ENSGT00940000155176 #35	ENSGT00390000018130.a.a.a #36	ENSGT00390000007153.a.b #37	ENSGT00950000183103.d.a.a
Elapidae_a	ANCESTRAL SPECIES	51	ENSGT00940000154225.a	ENSGT00940000159412	ENSGT00950000183094.a	ENSGT00940000159348.e #7	ENSGT00390000006215 #8	ENSGT00940000161136 #9	ENSGT00940000156524 #12	ENSGT00530000064050 #14	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641.f #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000161723 #26	ENSGT00450000040262 #27	ENSGT00390000016607.b #28	ENSGT00940000161835 #29	ENSGT01030000234515.a.b.a.a #30	ENSGT00940000157471 #31	ENSGT00940000157585 #33	ENSGT00940000157759 #34	ENSGT00940000155176 #35	ENSGT00390000018130.a.a.a #36	ENSGT00390000007153.a.b #37	ENSGT00950000183103.d.a.a
Acanthophiinae	ANCESTRAL SPECIES	51	ENSGT00940000154225.a	ENSGT00940000159412	ENSGT00950000183094.a	ENSGT00940000159348.e #7	ENSGT00390000006215 #8	ENSGT00940000161136 #9	ENSGT00940000156524 #12	ENSGT00530000064050 #14	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641.f #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000161723 #26	ENSGT00940000157585 #33	ENSGT00940000157759 #34	ENSGT00940000155176 #35	ENSGT00390000018130.a.a.a #36	ENSGT00390000007153.a.b #37	ENSGT00950000183103.d.a.a	ENSGT00940000155413.`c	ENSGT01090000260003.a.b.b.a.a.a.b.b	ENSGT01050000244970.a	ENSGT00390000014244.jb.a.e.b	ENSGT00390000014244.jb.a.e.a
Mainland tiger snake	MODERN SPECIES	271	PEAR1 (ENSNSUG00000006628)	NTRK1 (ENSNSUG00000006627)	ENSNSUG00000006626	ENSNSUG00000004839 #7	ENSNSUG00000004825 #8	ADAMTSL4 (ENSNSUG00000004821) #9	ZNF687 (ENSNSUG00000004816) #12	PSMD4 (ENSNSUG00000004814) #14	PIP5K1A (ENSNSUG00000004806) #15	VPS72 (ENSNSUG00000004804) #16	TMOD4 (ENSNSUG00000004788) #17	SCNM1 (ENSNSUG00000004787) #18	LYSMD1 (ENSNSUG00000004785) #19	TNFAIP8L2 (ENSNSUG00000004784) #20	SEMA6C (ENSNSUG00000004724) #21	ENSNSUG00000004714 #22	CDC42SE1 (ENSNSUG00000004713) #25	BNIPL (ENSNSUG00000004588) #26	PRUNE1 (ENSNSUG00000004237) #27	ENSNSUG00000004234
Eastern brown snake	MODERN SPECIES	133	ENSPTXG00000008802	HDGF (ENSPTXG00000008801)	ENSPTXG00000008800	ENSPTXG00000008799	INSRR (ENSPTXG00000008673)	ENSPTXG00000008652	NTRK1 (ENSPTXG00000008651)	ENSPTXG00000008650	ENSPTXG00000008648	ENSPTXG00000017635 #7	ADAMTSL4 (ENSPTXG00000017629) #9	ENSPTXG00000015006	ZNF687 (ENSPTXG00000015000) #12	PSMD4 (ENSPTXG00000014999) #14	ENSPTXG00000014998 #21	ENSPTXG00000014997 #22	GABPB2 (ENSPTXG00000014996) #23	MLLT11 (ENSPTXG00000014995) #24	CDC42SE1 (ENSPTXG00000014994) #25	BNIPL (ENSPTXG00000014993) #26	ARNT (ENSPTXG00000013404) #33	CTSK (ENSPTXG00000013397) #34	CTSS (ENSPTXG00000013396) #35	ENSPTXG00000013395 #36	ENSPTXG00000013394 #36	GOLPH3L (ENSPTXG00000013393) #37	MCL1 (ENSPTXG00000013392)	ENSPTXG00000013391	ENSPTXG00000013390	ENSPTXG00000013389	ENSPTXG00000013388
Blue-lipped sea krait	MODERN SPECIES	2551															ENSLLTG00000000733 #21	ENSLLTG00000000706 #22	GABPB2 (ENSLLTG00000000688) #23	MLLT11 (ENSLLTG00000000680) #24	ENSLLTG00000000665 #25	BNIPL (ENSLLTG00000000649) #26	PRUNE1 (ENSLLTG00000000636) #27	MINDY1 (ENSLLTG00000000613) #28	ENSLLTG00000000572 #29	CERS2 (ENSLLTG00000000539) #30	SETDB1 (ENSLLTG00000000506) #31	ARNT (ENSLLTG00000000401) #33	CTSK (ENSLLTG00000000356) #34	CTSS (ENSLLTG00000000316) #35	HORMAD1 (ENSLLTG00000000276) #36	GOLPH3L (ENSLLTG00000000241) #37	ENSLLTG00000000219
Indian cobra	MODERN SPECIES	17	RPRD2 (ENSNNAG00000013968)	ENSNNAG00000013882 #7	ENSNNAG00000013844 #8	ENSNNAG00000013825 #9	PI4KB (ENSNNAG00000013801) #10	ENSNNAG00000006768 #11	ZNF687 (ENSNNAG00000006339) #12	PSMD4 (ENSNNAG00000006301) #14	PIP5K1A (ENSNNAG00000006229) #15	VPS72 (ENSNNAG00000006200) #16	TMOD4 (ENSNNAG00000006178) #17	SCNM1 (ENSNNAG00000006161) #18	LYSMD1 (ENSNNAG00000006154) #19	TNFAIP8L2 (ENSNNAG00000006149) #20	SEMA6C (ENSNNAG00000005678) #21	ENSNNAG00000005625 #22	MLLT11 (ENSNNAG00000005617) #24	CDC42SE1 (ENSNNAG00000005605) #25	PRUNE1 (ENSNNAG00000005573) #27	MINDY1 (ENSNNAG00000005531) #28	ENSNNAG00000005471 #29	SETDB1 (ENSNNAG00000005428) #31	ARNT (ENSNNAG00000005374) #33	CTSK (ENSNNAG00000005315) #34	CTSS (ENSNNAG00000005282) #35	HORMAD1 (ENSNNAG00000005199) #36	GOLPH3L (ENSNNAG00000005180) #37	ENSNNAG00000005158	ENSA (ENSNNAG00000005148)	ENSNNAG00000005128	MCL1 (ENSNNAG00000005115)
Archelosauria	ANCESTRAL SPECIES	27	ENSGT00940000175972	ENSGT00390000014244.kb	ENSGT00550000074892 #10	ENSGT00940000165572 #11	ENSGT00940000156524 #12	ENSGT00960000189065 #13	ENSGT00530000064050 #14	ENSGT00990000206813	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000161723 #26	ENSGT00450000040262 #27	ENSGT00390000016607.b #28	ENSGT00940000161835 #29	ENSGT01030000234515.a.b.a.a #30	ENSGT00940000157471 #31	ENSGT01040000240780 #32	ENSGT00940000157585 #33	ENSGT00940000157759 #34	ENSGT00940000155176 #35	ENSGT00390000018130.a.a.a #36	ENSGT00390000007153.a.b #37
Cryptodira	ANCESTRAL SPECIES	20	ENSGT00940000160649	ENSGT00390000014244.jb.b	ENSGT01050000244970.a	ENSGT00940000175972	ENSGT00550000074892 #10	ENSGT00940000156524 #12	ENSGT00960000189065 #13	ENSGT00530000064050 #14	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000008714.a	ENSGT00550000075099	ENSGT00390000009272.r	ENSGT00390000011582	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00940000157535	ENSGT00940000161411	ENSGT00940000157083	ENSGT00940000156392.b	ENSGT00940000161394	ENSGT00940000159186	ENSGT00950000183007.a.a.b.eb.n.a	ENSGT00940000154757.mb	ENSGT00990000203615.b.a.a.a.a
Testudinoidea	ANCESTRAL SPECIES	17	ENSGT00390000000698	ENSGT00940000160649	ENSGT00390000014244.jb.b	ENSGT01050000244970.a	ENSGT00550000074892 #10	ENSGT00940000156524 #12	ENSGT00960000189065 #13	ENSGT00530000064050 #14	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000008714.a	ENSGT00550000075099	ENSGT00390000009272.r	ENSGT00390000011582	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00940000157535	ENSGT00940000161411	ENSGT00940000157083	ENSGT00940000156392.b	ENSGT00940000161394	ENSGT00940000159186.fb	ENSGT00950000183007.a.a.b.eb.n.a	ENSGT00990000203615.b.a.a.a.a	ENSGT01080000257365.b.a.b.b
Emydidae	ANCESTRAL SPECIES	18	ENSGT00390000000698	ENSGT00940000160649	ENSGT00390000014244.jb.b	ENSGT01050000244970.a	ENSGT00550000074892 #10	ENSGT00940000156524 #12	ENSGT00960000189065 #13	ENSGT00530000064050 #14	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000008714.a	ENSGT00550000075099	ENSGT00390000009272.r	ENSGT00390000011582	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00940000157535	ENSGT00940000161411	ENSGT00940000157083	ENSGT00940000156392.b	ENSGT00940000161394	ENSGT00940000159186.fb	ENSGT00950000183007.a.a.b.eb.n.a	ENSGT00990000203615.b.a.a.a.a	ENSGT01080000257365.b.a.b.b
Three-toed box turtle	MODERN SPECIES	331							ENSTMTG00000005918 #13	PSMD4 (ENSTMTG00000005908) #14	PIP5K1A (ENSTMTG00000005888) #15	VPS72 (ENSTMTG00000005843) #16	TMOD4 (ENSTMTG00000005817) #17	SCNM1 (ENSTMTG00000005785) #18	LYSMD1 (ENSTMTG00000005775) #19	TNFAIP8L2 (ENSTMTG00000005765) #20	SEMA6C (ENSTMTG00000005138) #21	ENSTMTG00000005072 #22	GABPB2 (ENSTMTG00000005046) #23	DEDD (ENSTMTG00000005027)	NIT1 (ENSTMTG00000005009)	PFDN2 (ENSTMTG00000004995)	KLHDC9 (ENSTMTG00000004978)	ENSTMTG00000004956	ENSTMTG00000004941	NECTIN4 (ENSTMTG00000004904)	USF1 (ENSTMTG00000004792)	ENSTMTG00000004768
painted turtle	MODERN SPECIES	738	SELENBP1 (ENSCPBG00000008928)	RFX5 (ENSCPBG00000008934)	PI4KB (ENSCPBG00000008940) #10	ENSCPBG00000008959	ENSCPBG00000008968	ZNF687 (ENSCPBG00000008978) #12	ENSCPBG00000008987 #13	PSMD4 (ENSCPBG00000008993) #14	PIP5K1A (ENSCPBG00000009007) #15	VPS72 (ENSCPBG00000009021) #16	TMOD4 (ENSCPBG00000009027) #17	ENSCPBG00000009031	LYSMD1 (ENSCPBG00000009036) #19	TNFAIP8L2 (ENSCPBG00000009040) #20	SEMA6C (ENSCPBG00000009050) #21	ENSCPBG00000009063 #22	GABPB2 (ENSCPBG00000009075) #23	DEDD (ENSCPBG00000009088)	NIT1 (ENSCPBG00000009095)	PFDN2 (ENSCPBG00000009101)	KLHDC9 (ENSCPBG00000009108)	ENSCPBG00000009117	ENSCPBG00000009137	NECTIN4 (ENSCPBG00000009148)	ARHGAP30 (ENSCPBG00000009161)	USF1 (ENSCPBG00000009165)	ENSCPBG00000009167	ENSCPBG00000009171	ENSCPBG00000009174	F11R (ENSCPBG00000009178)	ENSCPBG00000009182
Testudinidae	ANCESTRAL SPECIES	3	ENSGT00940000160649	ENSGT00390000014244.jb.b	ENSGT00390000014244.kb	ENSGT01050000244970.a	ENSGT00550000074892 #10	ENSGT00940000156524 #12	ENSGT00960000189065 #13	ENSGT00530000064050 #14	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000008714.a	ENSGT00550000075099	ENSGT00390000009272.r	ENSGT00390000011582	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00940000157535	ENSGT00940000161411	ENSGT00940000157083	ENSGT00940000161394	ENSGT00960000192506	ENSGT00940000159186.fb	ENSGT00950000183007.a.a.b.eb.n.a	ENSGT00990000203615.b.a.a.a.a	ENSGT01080000257365.b.a.b.b
Abingdon island giant tortoise	MODERN SPECIES	793		RFX5 (ENSCABG00000010477)	PI4KB (ENSCABG00000010478) #10	ENSCABG00000010479	ENSCABG00000010480	ZNF687 (ENSCABG00000010481) #12	ENSCABG00000010482 #13	PSMD4 (ENSCABG00000010484) #14	PIP5K1A (ENSCABG00000010487) #15	VPS72 (ENSCABG00000010488) #16	TMOD4 (ENSCABG00000010490) #17	SCNM1 (ENSCABG00000010492) #18	LYSMD1 (ENSCABG00000010498) #19	TNFAIP8L2 (ENSCABG00000010499) #20	SEMA6C (ENSCABG00000010500) #21	ENSCABG00000010501 #22	GABPB2 (ENSCABG00000010502) #23	DEDD (ENSCABG00000010504)	NIT1 (ENSCABG00000010505)	PFDN2 (ENSCABG00000010506)	KLHDC9 (ENSCABG00000010509)	ENSCABG00000010513	ENSCABG00000010515	NECTIN4 (ENSCABG00000010516)	ENSCABG00000010517	ARHGAP30 (ENSCABG00000010518)	USF1 (ENSCABG00000010519)	ENSCABG00000010595	ARSJ (ENSCABG00000014803)	UGT8 (ENSCABG00000014807)	ENSCABG00000014816
Goode s thornscrub tortoise	MODERN SPECIES	16	RFX5 (ENSGEVG00005018953)	ENSGEVG00005018980	PI4KB (ENSGEVG00005018996) #10	ENSGEVG00005019029	ENSGEVG00005019072	ZNF687 (ENSGEVG00005019089) #12	ENSGEVG00005019105 #13	PSMD4 (ENSGEVG00005019123) #14	PIP5K1A (ENSGEVG00005019142) #15	VPS72 (ENSGEVG00005019173) #16	TMOD4 (ENSGEVG00005019187) #17	SCNM1 (ENSGEVG00005019198) #18	LYSMD1 (ENSGEVG00005019208) #19	TNFAIP8L2 (ENSGEVG00005019210) #20	SEMA6C (ENSGEVG00005019225) #21	ENSGEVG00005019268 #22	GABPB2 (ENSGEVG00005019277) #23	DEDD (ENSGEVG00005019287)	NIT1 (ENSGEVG00005019292)	PFDN2 (ENSGEVG00005019297)	KLHDC9 (ENSGEVG00005019304)	ENSGEVG00005019330	ENSGEVG00005011800	NECTIN4 (ENSGEVG00005011864)	ARHGAP30 (ENSGEVG00005011976)	USF1 (ENSGEVG00005012245)	TSTD1 (ENSGEVG00005012275)	ENSGEVG00005012353	ENSGEVG00005012307	ENSGEVG00005012406	ENSGEVG00005012439
Archosauria	ANCESTRAL SPECIES	36	ENSGT00390000014244.jb.a	ENSGT01050000244970.a	ENSGT00550000074892 #10	ENSGT00940000165572 #11	ENSGT00940000156524 #12	ENSGT00960000189065 #13	ENSGT00530000064050 #14	ENSGT00990000206813	ENSGT00940000154703 #15	ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00940000160112 #25	ENSGT00940000161723 #26	ENSGT00450000040262 #27	ENSGT00390000016607.b #28	ENSGT01030000234515.a.b.a.a #30	ENSGT00940000157471 #31	ENSGT01040000240780 #32	ENSGT00940000157585 #33	ENSGT00940000157759 #34	ENSGT00940000155176 #35	ENSGT00390000018130.a.a.a #36	ENSGT00390000007153.a.b #37	ENSGT00940000155413
Australian saltwater crocodile	MODERN SPECIES	25	ENSCPRG00005008653	ENSCPRG00005008640	PI4KB (ENSCPRG00005008633) #10	ENSCPRG00005008162 #11	ZNF687 (ENSCPRG00005008064) #12	ENSCPRG00005008056 #13	PSMD4 (ENSCPRG00005007726) #14	PIP5K1A (ENSCPRG00005007576) #15	VPS72 (ENSCPRG00005007553) #16	TMOD4 (ENSCPRG00005007544) #17	SCNM1 (ENSCPRG00005007538) #18	LYSMD1 (ENSCPRG00005007534) #19	TNFAIP8L2 (ENSCPRG00005007532) #20	ENSCPRG00005007522	SEMA6C (ENSCPRG00005007512) #21	ENSCPRG00005007502 #22	GABPB2 (ENSCPRG00005007492) #23	ENSCPRG00005007485	ENSCPRG00005007482 #32	SETDB1 (ENSCPRG00005007301) #31	ARNT (ENSCPRG00005005374) #33	CTSK (ENSCPRG00005004905) #34	THEM4 (ENSCPRG00005004889)	S100A10 (ENSCPRG00005004877)	ENSCPRG00005004871	PRUNE1 (ENSCPRG00005004862) #27	MINDY1 (ENSCPRG00005004850) #28	CERS2 (ENSCPRG00005004837) #30	ENSCPRG00005004833	ENSCPRG00005004829	KHDC4 (ENSCPRG00005004670)
Anura	ANCESTRAL SPECIES	251										ENSGT00390000017503 #16	ENSGT00940000158734 #17	ENSGT00390000010811 #18	ENSGT00940000160002 #19	ENSGT00390000003488.b #20	ENSGT00940000158641 #21	ENSGT00940000154412.B.a #22	ENSGT00940000156794 #23	ENSGT00390000009895 #24	ENSGT00450000040262 #27	ENSGT00390000016607.b #28
Leishan spiny toad	MODERN SPECIES	4	PEX19 (ENSLLEG00000009462)	ENSLLEG00000009402	ENSLLEG00000009346	NOP9 (ENSLLEG00000009198)	VPS72 (ENSLLEG00000009074) #16	TMOD4 (ENSLLEG00000008661) #17	SCNM1 (ENSLLEG00000008538) #18	LYSMD1 (ENSLLEG00000008510) #19	TNFAIP8L2 (ENSLLEG00000029986) #20	ENSLLEG00000029980	ENSLLEG00000029974	ENSLLEG00000029967	ENSLLEG00000029963	SEMA6C (ENSLLEG00000029909) #21	ENSLLEG00000029883	ENSLLEG00000029875 #22	GABPB2 (ENSLLEG00000029858) #23	CDC42SE1 (ENSLLEG00000029847) #25	ENSLLEG00000029840	ENSLLEG00000029824	ENSLLEG00000029813	PRUNE1 (ENSLLEG00000029783) #27	MINDY1 (ENSLLEG00000029747) #28	DUSP23 (ENSLLEG00000029734)	ENSLLEG00000029723	IGSF9 (ENSLLEG00000029697)	ENSLLEG00000029685	ENSLLEG00000029675	ENSLLEG00000029664	ENSLLEG00000029648	ENSLLEG00000029636
Frog	MODERN SPECIES	8	ENSXETG00000040638	ENSXETG00000037222	ENSXETG00000037280	ENSXETG00000048955	ENSXETG00000044772	ENSXETG00000041549	ENSXETG00000039900	ENSXETG00000025656	ENSXETG00000042635	ENSXETG00000043026	ENSXETG00000034544	vangl2 (ENSXETG00000005842)	nhlh1 (ENSXETG00000041911)	ncstn (ENSXETG00000027247)	copa (ENSXETG00000005840)	ENSXETG00000032170 #22	gabpb2 (ENSXETG00000038139) #23	mllt11 (ENSXETG00000036495) #24	sema6c (ENSXETG00000005837) #21	ENSXETG00000037013	tnfaip8l2 (ENSXETG00000008142) #20	lysmd1 (ENSXETG00000008137) #19	scnm1 (ENSXETG00000008141) #18	tmod4 (ENSXETG00000008139) #17	nop9 (ENSXETG00000008138)	khdc4 (ENSXETG00000037253)	ENSXETG00000038392	atp1a2 (ENSXETG00000008125)	casq1 (ENSXETG00000008124)	pea15 (ENSXETG00000036086)	dcaf8 (ENSXETG00000008121)
Coelacanth	MODERN SPECIES	537	ADAR (ENSLACG00000015329)	CHRNB2 (ENSLACG00000015217)	UBE2Q1 (ENSLACG00000014854)	TDRD10 (ENSLACG00000014771)	SHE (ENSLACG00000014621)	IL6R (ENSLACG00000022592)	ATP8B2 (ENSLACG00000013838)	HAX1 (ENSLACG00000012932)	VPS72 (ENSLACG00000012809) #16	TMOD4 (ENSLACG00000012182) #17	SCNM1 (ENSLACG00000012010) #18	LYSMD1 (ENSLACG00000011911) #19	TNFAIP8L2 (ENSLACG00000011713) #20	ENSLACG00000010625	SEMA6C (ENSLACG00000003237) #21	ENSLACG00000001227 #22