Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES ENSGT00950000183201.b.b.b.a #22 Euteleostomi ANCESTRAL SPECIES 703 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000153137.a.b Sarcopterygii ANCESTRAL SPECIES 617 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000153137.a.b Tetrapoda ANCESTRAL SPECIES 27 ENSGT00940000159725 ENSGT00940000162232 ENSGT00940000156683 ENSGT00940000163777.a ENSGT00940000159910 ENSGT00940000160487 ENSGT00940000165542 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00940000158869 ENSGT00940000164810 ENSGT00940000155521 ENSGT00390000002137 ENSGT00940000160403 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000153137.a.b ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178460 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a Amniota ANCESTRAL SPECIES 17 ENSGT00940000159222 ENSGT00940000159308 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00990000206303 ENSGT00390000017909 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153503.b ##20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178460 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000162069 Mammalia ANCESTRAL SPECIES 30 ENSGT00550000074939 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000162238 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153503.b ##20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178460 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00970000194357.a ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000162069 Theria ANCESTRAL SPECIES 18 ENSGT00940000153203.A.a ENSGT00550000074939 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000162238 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.b ##20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178460 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00970000194357.a Eutheria ANCESTRAL SPECIES 6 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178460 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00940000162292 #12 Boreoeutheria ANCESTRAL SPECIES 9 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000178460 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00940000164840 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Glires ANCESTRAL SPECIES 7 ENSGT00940000164840 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Rodentia ANCESTRAL SPECIES 7 ENSGT00940000164840 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Rodentia_A ANCESTRAL SPECIES 7 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Hystricomorpha ANCESTRAL SPECIES 30 ENSGT00940000160245 #8 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Hystricomorpha_a ANCESTRAL SPECIES 74 ENSGT00940000162238 ENSGT00940000160245 #8 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Hystricomorpha_b ANCESTRAL SPECIES 19 ENSGT00940000162238 ENSGT00940000160245 #8 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Degu MODERN SPECIES 70 ENSODEG00000007622 #7 CLK4 (ENSODEG00000006750) #8 ZNF354A (ENSODEG00000008278) #9 ENSODEG00000006751 #10 ENSODEG00000007859 #11 PROP1 (ENSODEG00000007660) #12 ZNF354B (ENSODEG00000007968) #13 ZNF454 (ENSODEG00000007335) #14 GRM6 (ENSODEG00000009985) #15 ZNF879 (ENSODEG00000007967) #16 ZNF354C (ENSODEG00000007509) #17 ADAMTS2 (ENSODEG00000010343) #18 RUFY1 (ENSODEG00000006045) #19 ENSODEG00000007058 #20 CANX (ENSODEG00000007247) #21 MAML1 (ENSODEG00000007120) #22 LTC4S (ENSODEG00000006956) #23 MGAT4B (ENSODEG00000006661) #24 SQSTM1 (ENSODEG00000007536) #25 TBC1D9B (ENSODEG00000007268) #26 RNF130 (ENSODEG00000006815) #27 ENSODEG00000006074 #28 GFPT2 (ENSODEG00000007246) #29 ENSODEG00000006939 #30 CNOT6 (ENSODEG00000007041) #31 SCGB3A1 (ENSODEG00000006628) #32 FLT4 (ENSODEG00000006420) #33 Long-tailed chinchilla MODERN SPECIES 115 CLK4 (ENSCLAG00000013604) #8 ZNF354A (ENSCLAG00000014648) #9 ENSCLAG00000010643 #11 ENSCLAG00000017710 #11 ZNF354B (ENSCLAG00000013514) #13 ZFP2 (ENSCLAG00000011174) ENSCLAG00000010435 #14 ENSCLAG00000010195 #14 GRM6 (ENSCLAG00000015195) #15 ZNF879 (ENSCLAG00000013696) #16 ZNF354C (ENSCLAG00000012651) #17 ADAMTS2 (ENSCLAG00000012213) #18 RUFY1 (ENSCLAG00000012650) #19 HNRNPH1 (ENSCLAG00000013617) #20 CANX (ENSCLAG00000012635) #21 MAML1 (ENSCLAG00000012443) #22 MGAT4B (ENSCLAG00000013986) #24 SQSTM1 (ENSCLAG00000014864) #25 TBC1D9B (ENSCLAG00000010716) #26 RNF130 (ENSCLAG00000012509) #27 RASGEF1C (ENSCLAG00000010592) MAPK9 (ENSCLAG00000011477) #28 GFPT2 (ENSCLAG00000011097) #29 CNOT6 (ENSCLAG00000010489) #31 SCGB3A1 (ENSCLAG00000017376) #32 FLT4 (ENSCLAG00000012174) #33 Guinea pig MODERN SPECIES 176 ZNF354A (ENSCPOG00000034791) #9 ENSCPOG00000037406 #11 ENSCPOG00000025194 #11 PROP1 (ENSCPOG00000020734) #12 ZNF354B (ENSCPOG00000002227) #13 ZFP2 (ENSCPOG00000031347) ENSCPOG00000033835 #14 ENSCPOG00000035563 #14 GRM6 (ENSCPOG00000001162) #15 ZNF879 (ENSCPOG00000040313) #16 ZNF354C (ENSCPOG00000038581) #17 ADAMTS2 (ENSCPOG00000001168) #18 RUFY1 (ENSCPOG00000012088) #19 ENSCPOG00000001485 #20 CANX (ENSCPOG00000003259) #21 MAML1 (ENSCPOG00000009382) #22 LTC4S (ENSCPOG00000021312) #23 MGAT4B (ENSCPOG00000005836) #24 SQSTM1 (ENSCPOG00000026534) #25 TBC1D9B (ENSCPOG00000011294) #26 ENSCPOG00000015076 RNF130 (ENSCPOG00000013821) #27 Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000045105 #11 ENSHGLG00000032445 #11 ENSHGLG00000009648 #12 ENSHGLG00000034750 #11 ENSHGLG00000033241 #11 ENSHGLG00000047455 #13 ZFP2 (ENSHGLG00000033138) GRM6 (ENSHGLG00000013576) #15 ZNF879 (ENSHGLG00000013266) #16 ENSHGLG00000019454 #17 ADAMTS2 (ENSHGLG00000017531) #18 RUFY1 (ENSHGLG00000017638) #19 HNRNPH1 (ENSHGLG00000018565) #20 ENSHGLG00000014040 ENSHGLG00000014507 #21 MAML1 (ENSHGLG00000007422) #22 LTC4S (ENSHGLG00000008079) #23 ENSHGLG00000010792 #24 SQSTM1 (ENSHGLG00000012249) #25 ENSHGLG00000034162 TBC1D9B (ENSHGLG00000014248) #26 RNF130 (ENSHGLG00000019044) #27 ENSHGLG00000016658 RASGEF1C (ENSHGLG00000018254) ENSHGLG00000039343 MAPK9 (ENSHGLG00000018063) #28 GFPT2 (ENSHGLG00000018020) #29 CNOT6 (ENSHGLG00000017756) #31 ENSHGLG00000015320 #32 ENSHGLG00000017837 #33 ENSHGLG00000019068 Sciuridae ANCESTRAL SPECIES 33 ENSGT00940000160245 #8 ENSGT00940000161487 #9 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Marmotini ANCESTRAL SPECIES 90 ENSGT00940000162327 ENSGT00940000163610 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.d.b.a Marmotini_b ANCESTRAL SPECIES 162 ENSGT00940000162327 ENSGT00940000163610 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.d.b.a Arctic ground squirrel MODERN SPECIES 533 CANX (ENSUPAG00010012868) #21 MAML1 (ENSUPAG00010012921) #22 LTC4S (ENSUPAG00010012940) #23 MGAT4B (ENSUPAG00010012951) #24 SQSTM1 (ENSUPAG00010012981) #25 MRNIP (ENSUPAG00010013026) TBC1D9B (ENSUPAG00010013038) #26 RNF130 (ENSUPAG00010013174) #27 RASGEF1C (ENSUPAG00010013202) MAPK9 (ENSUPAG00010013292) #28 GFPT2 (ENSUPAG00010013498) #29 ENSUPAG00010013530 CNOT6 (ENSUPAG00010013547) #31 SCGB3A1 (ENSUPAG00010013577) #32 FLT4 (ENSUPAG00010013592) #33 ENSUPAG00010013659 ENSUPAG00010013751 Squirrel MODERN SPECIES 339 ENSSTOG00000001898 ENSSTOG00000027829 PROP1 (ENSSTOG00000013571) #12 ZNF354B (ENSSTOG00000008858) #13 ZFP2 (ENSSTOG00000034472) ZNF454 (ENSSTOG00000029783) #14 GRM6 (ENSSTOG00000021282) #15 ZNF879 (ENSSTOG00000033666) #16 ZNF354C (ENSSTOG00000023695) #17 ADAMTS2 (ENSSTOG00000004811) #18 RUFY1 (ENSSTOG00000016368) #19 HNRNPH1 (ENSSTOG00000016376) #20 CBY3 (ENSSTOG00000013625) CANX (ENSSTOG00000013636) #21 MAML1 (ENSSTOG00000013644) #22 LTC4S (ENSSTOG00000028546) #23 MGAT4B (ENSSTOG00000015692) #24 SQSTM1 (ENSSTOG00000013654) #25 ENSSTOG00000013660 TBC1D9B (ENSSTOG00000013665) #26 RNF130 (ENSSTOG00000013681) #27 RASGEF1C (ENSSTOG00000002744) MAPK9 (ENSSTOG00000002755) #28 GFPT2 (ENSSTOG00000002766) #29 ENSSTOG00000026322 CNOT6 (ENSSTOG00000002803) #31 SCGB3A1 (ENSSTOG00000029379) #32 FLT4 (ENSSTOG00000009900) #33 ENSSTOG00000024162 ENSSTOG00000023199 Alpin marmot MODERN SPECIES 119 PGBD2 (ENSMMMG00000010992) ENSMMMG00000010966 PROP1 (ENSMMMG00000010955) #12 ZNF354B (ENSMMMG00000010934) #13 ZFP2 (ENSMMMG00000010928) ZNF454 (ENSMMMG00000010924) #14 GRM6 (ENSMMMG00000010868) #15 ZNF879 (ENSMMMG00000010856) #16 ZNF354C (ENSMMMG00000010838) #17 ADAMTS2 (ENSMMMG00000010786) #18 RUFY1 (ENSMMMG00000010729) #19 HNRNPH1 (ENSMMMG00000010637) #20 ENSMMMG00000010630 CANX (ENSMMMG00000010583) #21 MAML1 (ENSMMMG00000010563) #22 LTC4S (ENSMMMG00000010544) #23 MGAT4B (ENSMMMG00000010531) #24 SQSTM1 (ENSMMMG00000010495) #25 ENSMMMG00000010488 ENSMMMG00000010477 ENSMMMG00000010472 TBC1D9B (ENSMMMG00000010464) #26 RNF130 (ENSMMMG00000010453) #27 RASGEF1C (ENSMMMG00000010333) MAPK9 (ENSMMMG00000009979) #28 GFPT2 (ENSMMMG00000009950) #29 ENSMMMG00000009922 ENSMMMG00000009920 CNOT6 (ENSMMMG00000009896) #31 SCGB3A1 (ENSMMMG00000009881) #32 Eurasian red squirrel MODERN SPECIES 15 ENSSVLG00005003942 #11 ENSSVLG00005003957 PROP1 (ENSSVLG00005003982) #12 ZNF354B (ENSSVLG00005003997) #13 ZFP2 (ENSSVLG00005004011) ZNF454 (ENSSVLG00005004024) #14 GRM6 (ENSSVLG00005004048) #15 ZNF879 (ENSSVLG00005004068) #16 ZNF354C (ENSSVLG00005004083) #17 ADAMTS2 (ENSSVLG00005004107) #18 RUFY1 (ENSSVLG00005004214) #19 HNRNPH1 (ENSSVLG00005004313) #20 CBY3 (ENSSVLG00005004437) CANX (ENSSVLG00005004460) #21 ENSSVLG00005004484 MAML1 (ENSSVLG00005004507) #22 LTC4S (ENSSVLG00005004534) #23 MGAT4B (ENSSVLG00005004599) #24 SQSTM1 (ENSSVLG00005004679) #25 MRNIP (ENSSVLG00005004714) TBC1D9B (ENSSVLG00005004773) #26 ENSSVLG00005004884 RNF130 (ENSSVLG00005004920) #27 RASGEF1C (ENSSVLG00005004985) MAPK9 (ENSSVLG00005005069) #28 ENSSVLG00005005097 #28 GFPT2 (ENSSVLG00005005125) #29 CNOT6 (ENSSVLG00005005179) #31 SCGB3A1 (ENSSVLG00005005231) #32 ENSSVLG00005005257 ENSSVLG00005005292 Rodentia_B ANCESTRAL SPECIES 4 ENSGT00840000130327 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b ENSGT00530000063632.B Myomorpha ANCESTRAL SPECIES 28 ENSGT00840000130327 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.f ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a Muroidea ANCESTRAL SPECIES 10 ENSGT00940000161487 #9 ENSGT00940000164840 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000162330.i.a.b.a #11 ENSGT00940000162330.i.a.a #11 ENSGT00940000162330.j #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b Cricetidae ANCESTRAL SPECIES ENSGT00940000162330.i.a.b.a #11 ENSGT00940000162330.i.a.a #11 ENSGT00940000162330.j #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b Cricetidae_B ANCESTRAL SPECIES ENSGT00840000130327 ENSGT00940000161487 #9 ENSGT00940000162330.j #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b Northern American deer mouse MODERN SPECIES 21 ENSPEMG00000025212 #11 ENSPEMG00000026849 #11 Or1ad6 (ENSPEMG00000029264) #11 Prop1 (ENSPEMG00000002087) #12 Zfp354b (ENSPEMG00000001281) #13 Zfp2 (ENSPEMG00000030164) Zfp454 (ENSPEMG00000009308) #14 Grm6 (ENSPEMG00000012676) #15 Zfp879 (ENSPEMG00000010770) #16 Zfp354c (ENSPEMG00000014426) #17 Adamts2 (ENSPEMG00000018873) #18 Rufy1 (ENSPEMG00000009753) #19 Hnrnph1 (ENSPEMG00000018866) #20 ENSPEMG00000017877 Canx (ENSPEMG00000005531) #21 Maml1 (ENSPEMG00000019224) #22 Ltc4s (ENSPEMG00000027708) Mgat4b (ENSPEMG00000014635) #24 Sqstm1 (ENSPEMG00000019274) #25 Mrnip (ENSPEMG00000018478) Tbc1d9b (ENSPEMG00000013746) #26 Rnf130 (ENSPEMG00000016730) #27 Rasgef1c (ENSPEMG00000018905) Mapk9 (ENSPEMG00000016205) #28 Gfpt2 (ENSPEMG00000001870) #29 Cnot6 (ENSPEMG00000000627) #31 Scgb3a1 (ENSPEMG00000001932) #32 Flt4 (ENSPEMG00000013317) #33 ENSPEMG00000026395 ENSPEMG00000024369 ENSPEMG00000028647 Prairie vole MODERN SPECIES 15 Clk4 (ENSMOCG00000022044) #8 ENSMOCG00000002350 Zfp354a (ENSMOCG00000003692) #9 Prop1 (ENSMOCG00000021712) #12 Zfp354b (ENSMOCG00000019941) #13 Zfp2 (ENSMOCG00000022747) Zfp454 (ENSMOCG00000020470) #14 Grm6 (ENSMOCG00000018877) #15 Zfp879 (ENSMOCG00000020947) #16 Zfp354c (ENSMOCG00000022297) #17 Adamts2 (ENSMOCG00000022331) #18 Rufy1 (ENSMOCG00000003244) #19 Hnrnph1 (ENSMOCG00000020579) #20 ENSMOCG00000011359 Canx (ENSMOCG00000011838) #21 Maml1 (ENSMOCG00000001181) #22 ENSMOCG00000021052 #23 Mgat4b (ENSMOCG00000010677) #24 ENSMOCG00000002756 ENSMOCG00000019043 Mrnip (ENSMOCG00000014732) Tbc1d9b (ENSMOCG00000017854) #26 Rnf130 (ENSMOCG00000022727) #27 Rasgef1c (ENSMOCG00000017254) Mapk9 (ENSMOCG00000020546) #28 Gfpt2 (ENSMOCG00000022580) #29 Cnot6 (ENSMOCG00000021662) #31 Scgb3a1 (ENSMOCG00000018902) #32 Flt4 (ENSMOCG00000016968) #33 ENSMOCG00000002436 ENSMOCG00000002339 Cricetinae ANCESTRAL SPECIES ENSGT00940000162330.i.a.b.a #11 ENSGT00940000162330.i.a.a #11 ENSGT00940000162330.j #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b Chinese hamster chok1gshd MODERN SPECIES 229 Or1ad1 (ENSCGRG00001005982) #11 Or1ad6 (ENSCGRG00001007584) #11 Prop1 (ENSCGRG00001004549) #12 Zfp2 (ENSCGRG00001006658) Zfp354b (ENSCGRG00001006089) #13 Zfp454 (ENSCGRG00001013939) #14 Grm6 (ENSCGRG00001015589) #15 Zfp879 (ENSCGRG00001013407) #16 Zfp354c (ENSCGRG00001011620) #17 Adamts2 (ENSCGRG00001017939) #18 ENSCGRG00001015852 Rufy1 (ENSCGRG00001013990) #19 Hnrnph1 (ENSCGRG00001013538) #20 Cby3 (ENSCGRG00001009348) Canx (ENSCGRG00001017710) #21 Maml1 (ENSCGRG00001016447) #22 ENSCGRG00001013494 #23 Mgat4b (ENSCGRG00001006474) #24 ENSCGRG00001010734 Sqstm1 (ENSCGRG00001009697) #25 Mrnip (ENSCGRG00001004426) Tbc1d9b (ENSCGRG00001020092) #26 Rnf130 (ENSCGRG00001021248) #27 Rasgef1c (ENSCGRG00001012629) Mapk9 (ENSCGRG00001007000) #28 Gfpt2 (ENSCGRG00001020958) #29 Cnot6 (ENSCGRG00001011452) #31 Scgb3a1 (ENSCGRG00001005289) #32 Flt4 (ENSCGRG00001019633) #33 ENSCGRG00001001933 ENSCGRG00001015595 Golden Hamster MODERN SPECIES 647 ENSMAUG00000008965 Clk4 (ENSMAUG00000006824) #8 Zfp354a (ENSMAUG00000000735) #9 Prop1 (ENSMAUG00000013991) #12 Zfp354b (ENSMAUG00000000163) #13 Zfp2 (ENSMAUG00000006975) Zfp454 (ENSMAUG00000013415) #14 Grm6 (ENSMAUG00000017668) #15 Zfp879 (ENSMAUG00000000179) #16 Zfp354c (ENSMAUG00000001171) #17 Adamts2 (ENSMAUG00000000258) #18 Rufy1 (ENSMAUG00000010229) #19 Hnrnph1 (ENSMAUG00000012959) #20 ENSMAUG00000005355 Canx (ENSMAUG00000007570) #21 Maml1 (ENSMAUG00000011048) #22 ENSMAUG00000004203 #23 Mgat4b (ENSMAUG00000000092) #24 Sqstm1 (ENSMAUG00000014382) #25 Mrnip (ENSMAUG00000016042) Tbc1d9b (ENSMAUG00000014065) #26 Rnf130 (ENSMAUG00000015405) #27 Rasgef1c (ENSMAUG00000017005) Mapk9 (ENSMAUG00000017175) #28 Gfpt2 (ENSMAUG00000000755) #29 Cnot6 (ENSMAUG00000019798) #31 Scgb3a1 (ENSMAUG00000012240) #32 Flt4 (ENSMAUG00000014271) #33 ENSMAUG00000018285 ENSMAUG00000016974 Or2y16 (ENSMAUG00000016979) Murinae ANCESTRAL SPECIES 7 ENSGT00940000162330.i.a.b.a #11 ENSGT00940000162330.i.a.a #11 ENSGT00940000162330.j #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.f ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.e Mus ANCESTRAL SPECIES 2 ENSGT00940000162330.i.b #11 ENSGT00940000162330.i.a.a #11 ENSGT00940000162330.j #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.f ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.e ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.a Mus_A ANCESTRAL SPECIES 2 ENSGT00940000162330.i.a.a #11 ENSGT00940000162330.j #11 ENSGT00940000162292 #12 ENSGT00860000136315 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00900000143680 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.f ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.e ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.a Mus_B ANCESTRAL SPECIES 2 ENSGT00940000162330.i.a.a #11 ENSGT00940000162330.j #11 ENSGT00940000162292 #12 ENSGT00860000136315 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00900000143680 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.f ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.e ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.a Mus_C ANCESTRAL SPECIES 3 ENSGT00940000162330.i.a.a #11 ENSGT00940000162330.j #11 ENSGT00940000162292 #12 ENSGT00860000136315 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00900000143680 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b spretus MODERN SPECIES 2 Or1ad1 (MGP_SPRETEiJ_G0017147) #11 Or1ad6 (MGP_SPRETEiJ_G0017146) #11 Prop1 (MGP_SPRETEiJ_G0017145) #12 4933414I15Rik (MGP_SPRETEiJ_G0017144) Zfp354b (MGP_SPRETEiJ_G0017143) #13 Zfp2 (MGP_SPRETEiJ_G0017142) Zfp454 (MGP_SPRETEiJ_G0017141) #14 Grm6 (MGP_SPRETEiJ_G0017140) #15 Zfp879 (MGP_SPRETEiJ_G0017139) #16 Zfp354c (MGP_SPRETEiJ_G0017138) #17 Adamts2 (MGP_SPRETEiJ_G0017137) #18 Rufy1 (MGP_SPRETEiJ_G0017136) #19 MGP_SPRETEiJ_G0017135 #20 MGP_SPRETEiJ_G0017134 Canx (MGP_SPRETEiJ_G0017133) #21 Maml1 (MGP_SPRETEiJ_G0017132) #22 Ltc4s (MGP_SPRETEiJ_G0017131) Mgat4b (MGP_SPRETEiJ_G0017130) #24 Sqstm1 (MGP_SPRETEiJ_G0017129) #25 Mrnip (MGP_SPRETEiJ_G0017128) Tbc1d9b (MGP_SPRETEiJ_G0017127) #26 Rnf130 (MGP_SPRETEiJ_G0017126) #27 Rasgef1c (MGP_SPRETEiJ_G0017125) Mapk9 (MGP_SPRETEiJ_G0017124) #28 Gfpt2 (MGP_SPRETEiJ_G0017123) #29 Cnot6 (MGP_SPRETEiJ_G0017122) #31 Scgb3a1 (MGP_SPRETEiJ_G0017121) #32 Flt4 (MGP_SPRETEiJ_G0017120) #33 MGP_SPRETEiJ_G0017119 MGP_SPRETEiJ_G0017118 MGP_SPRETEiJ_G0017117 Steppe mouse MODERN SPECIES 2758 Or1ad1 (ENSMSIG00000010102) #11 Or1ad6 (ENSMSIG00000010084) #11 Prop1 (ENSMSIG00000010077) #12 4933414I15Rik (ENSMSIG00000010069) Zfp354b (ENSMSIG00000010046) #13 Zfp2 (ENSMSIG00000010031) Zfp454 (ENSMSIG00000010013) #14 Grm6 (ENSMSIG00000009979) #15 Zfp879 (ENSMSIG00000009906) #16 Zfp354c (ENSMSIG00000009873) #17 Adamts2 (ENSMSIG00000009833) #18 Rufy1 (ENSMSIG00000009787) #19 Hnrnph1 (ENSMSIG00000009749) #20 ENSMSIG00000009741 Canx (ENSMSIG00000009706) #21 Maml1 (ENSMSIG00000009693) #22 Ltc4s (ENSMSIG00000009669) Mgat4b (ENSMSIG00000009625) #24 Sqstm1 (ENSMSIG00000009550) #25 Mrnip (ENSMSIG00000009547) Mouse MODERN SPECIES 2 Or1ad1 (ENSMUSG00000061952) #11 Or1ad6 (ENSMUSG00000050343) #11 Prop1 (ENSMUSG00000044542) #12 4933414I15Rik (ENSMUSG00000072983) Zfp354b (ENSMUSG00000020335) #13 Zfp2 (ENSMUSG00000049321) Zfp454 (ENSMUSG00000048728) #14 Grm6 (ENSMUSG00000000617) #15 Zfp879 (ENSMUSG00000044296) #16 Zfp354c (ENSMUSG00000044807) #17 Adamts2 (ENSMUSG00000036545) #18 Rufy1 (ENSMUSG00000020375) #19 Hnrnph1 (ENSMUSG00000007850) #20 Cby3 (ENSMUSG00000050087) Canx (ENSMUSG00000020368) #21 Maml1 (ENSMUSG00000050567) #22 Ltc4s (ENSMUSG00000020377) Mgat4b (ENSMUSG00000036620) #24 Sqstm1 (ENSMUSG00000015837) #25 Mrnip (ENSMUSG00000020381) Tbc1d9b (ENSMUSG00000036644) #26 Rnf130 (ENSMUSG00000020376) #27 Rasgef1c (ENSMUSG00000020374) Mapk9 (ENSMUSG00000020366) #28 Gfpt2 (ENSMUSG00000020363) #29 Cnot6 (ENSMUSG00000020362) #31 Scgb3a1 (ENSMUSG00000064057) #32 Flt4 (ENSMUSG00000020357) #33 Or2y10 (ENSMUSG00000107645) Or2y11 (ENSMUSG00000095187) Or2y12 (ENSMUSG00000063827) Ryukyu mouse MODERN SPECIES 2 Or1ad6 (MGP_CAROLIEiJ_G0016302) #11 Prop1 (MGP_CAROLIEiJ_G0016301) #12 4933414I15Rik (MGP_CAROLIEiJ_G0016300) Zfp354b (MGP_CAROLIEiJ_G0016299) #13 Zfp2 (MGP_CAROLIEiJ_G0016298) Zfp454 (MGP_CAROLIEiJ_G0016297) #14 Grm6 (MGP_CAROLIEiJ_G0016296) #15 Zfp879 (MGP_CAROLIEiJ_G0016295) #16 Zfp354c (MGP_CAROLIEiJ_G0016294) #17 Adamts2 (MGP_CAROLIEiJ_G0016293) #18 Rufy1 (MGP_CAROLIEiJ_G0016292) #19 MGP_CAROLIEiJ_G0016291 #20 MGP_CAROLIEiJ_G0016290 MGP_CAROLIEiJ_G0016289 Canx (MGP_CAROLIEiJ_G0016288) #21 Maml1 (MGP_CAROLIEiJ_G0016287) #22 Ltc4s (MGP_CAROLIEiJ_G0016286) Mgat4b (MGP_CAROLIEiJ_G0016285) #24 Sqstm1 (MGP_CAROLIEiJ_G0016284) #25 Mrnip (MGP_CAROLIEiJ_G0016283) Tbc1d9b (MGP_CAROLIEiJ_G0016282) #26 Rnf130 (MGP_CAROLIEiJ_G0016281) #27 Rasgef1c (MGP_CAROLIEiJ_G0016280) Mapk9 (MGP_CAROLIEiJ_G0016279) #28 Gfpt2 (MGP_CAROLIEiJ_G0016278) #29 Cnot6 (MGP_CAROLIEiJ_G0016277) #31 Scgb3a1 (MGP_CAROLIEiJ_G0016276) #32 Flt4 (MGP_CAROLIEiJ_G0016275) #33 MGP_CAROLIEiJ_G0016274 MGP_CAROLIEiJ_G0016273 MGP_CAROLIEiJ_G0016272 Shrew mouse MODERN SPECIES 5 Or1ad8 (MGP_PahariEiJ_G0017439) #11 Or1ad1 (MGP_PahariEiJ_G0017438) #11 Or1ad6 (MGP_PahariEiJ_G0017437) #11 Prop1 (MGP_PahariEiJ_G0017436) #12 Zfp354b (MGP_PahariEiJ_G0017434) #13 Zfp2 (MGP_PahariEiJ_G0017433) Zfp454 (MGP_PahariEiJ_G0017432) #14 Grm6 (MGP_PahariEiJ_G0017431) #15 Zfp879 (MGP_PahariEiJ_G0017430) #16 Zfp354c (MGP_PahariEiJ_G0017429) #17 Adamts2 (MGP_PahariEiJ_G0017428) #18 Rufy1 (MGP_PahariEiJ_G0017427) #19 Hnrnph1 (MGP_PahariEiJ_G0017426) #20 Cby3 (MGP_PahariEiJ_G0017425) Canx (MGP_PahariEiJ_G0017424) #21 Maml1 (MGP_PahariEiJ_G0017423) #22 MGP_PahariEiJ_G0017422 #23 Mgat4b (MGP_PahariEiJ_G0017421) #24 Sqstm1 (MGP_PahariEiJ_G0017420) #25 Mrnip (MGP_PahariEiJ_G0017419) Tbc1d9b (MGP_PahariEiJ_G0017418) #26 Rnf130 (MGP_PahariEiJ_G0017417) #27 Rasgef1c (MGP_PahariEiJ_G0017416) Mapk9 (MGP_PahariEiJ_G0017415) #28 Gfpt2 (MGP_PahariEiJ_G0017414) #29 Cnot6 (MGP_PahariEiJ_G0017413) #31 Scgb3a1 (MGP_PahariEiJ_G0017412) #32 Flt4 (MGP_PahariEiJ_G0017411) #33 MGP_PahariEiJ_G0017410 MGP_PahariEiJ_G0017409 Or2y15 (MGP_PahariEiJ_G0017408) Rat MODERN SPECIES 1 Or1ad5 (ENSRNOG00000029930) #11 Or1ad1 (ENSRNOG00000063756) #11 Or1ad6 (ENSRNOG00000003668) #11 Prop1 (ENSRNOG00000003671) #12 ENSRNOG00000067059 Zfp2 (ENSRNOG00000030750) Znf454 (ENSRNOG00000029678) #13 Grm6 (ENSRNOG00000000233) #15 Zfp879 (ENSRNOG00000030517) #16 Zfp354c (ENSRNOG00000029205) #17 Adamts2 (ENSRNOG00000061484) #18 Rufy1 (ENSRNOG00000003536) #19 Hnrnph1 (ENSRNOG00000003399) #20 Cby3 (ENSRNOG00000066223) Canx (ENSRNOG00000003343) #21 Maml1 (ENSRNOG00000003268) #22 Ltc4s (ENSRNOG00000003244) Mgat4b (ENSRNOG00000003235) #24 Sqstm1 (ENSRNOG00000003147) #25 Mrnip (ENSRNOG00000003068) Tbc1d9b (ENSRNOG00000003050) #26 Rnf130 (ENSRNOG00000046330) #27 Rasgef1c (ENSRNOG00000003005) Mapk9 (ENSRNOG00000002823) #28 Gfpt2 (ENSRNOG00000002810) #29 Cnot6 (ENSRNOG00000054891) #31 Scgb3a1 (ENSRNOG00000002718) #32 Flt4 (ENSRNOG00000002511) #33 LOC102555091 (ENSRNOG00000068579) Or2y11 (ENSRNOG00000065754) Or2y12 (ENSRNOG00000070927) Upper Galilee mountains blind mole rat MODERN SPECIES 1624 Prop1 (ENSNGAG00000016946) #12 Zfp2 (ENSNGAG00000015033) Zfp454 (ENSNGAG00000001170) #14 Grm6 (ENSNGAG00000000051) #15 Zfp879 (ENSNGAG00000010850) #16 Zfp354c (ENSNGAG00000013055) #17 Adamts2 (ENSNGAG00000007774) #18 Rufy1 (ENSNGAG00000014023) #19 Hnrnph1 (ENSNGAG00000014666) #20 ENSNGAG00000019073 Canx (ENSNGAG00000009718) #21 Maml1 (ENSNGAG00000007418) #22 ENSNGAG00000019905 #23 Mgat4b (ENSNGAG00000011567) #24 Sqstm1 (ENSNGAG00000000111) #25 Mrnip (ENSNGAG00000019013) Tbc1d9b (ENSNGAG00000020655) #26 ENSNGAG00000013038 Rnf130 (ENSNGAG00000000237) #27 Rasgef1c (ENSNGAG00000020883) Mapk9 (ENSNGAG00000019965) #28 Gfpt2 (ENSNGAG00000014610) #29 Cnot6 (ENSNGAG00000008269) #31 Scgb3a1 (ENSNGAG00000011521) #32 Flt4 (ENSNGAG00000013547) #33 Lesser Egyptian jerboa MODERN SPECIES 133 Adamts2 (ENSJJAG00000001682) #18 ENSJJAG00000010190 Rufy1 (ENSJJAG00000013513) #19 Hnrnph1 (ENSJJAG00000016203) #20 ENSJJAG00000014052 Canx (ENSJJAG00000022784) #21 Maml1 (ENSJJAG00000023847) #22 ENSJJAG00000019535 #23 Mgat4b (ENSJJAG00000021000) #24 ENSJJAG00000012040 #25 Mrnip (ENSJJAG00000010968) Tbc1d9b (ENSJJAG00000013138) #26 ENSJJAG00000013685 Rnf130 (ENSJJAG00000014438) #27 Rasgef1c (ENSJJAG00000016338) Mapk9 (ENSJJAG00000012308) #28 Gfpt2 (ENSJJAG00000014420) #29 Cnot6 (ENSJJAG00000012296) #31 Scgb3a1 (ENSJJAG00000011541) #32 Flt4 (ENSJJAG00000017737) #33 Sparc (ENSJJAG00000003597) Fat2 (ENSJJAG00000019929) Kangaroo rat MODERN SPECIES 454 Phykpl (ENSDORG00000011023) Col23a1 (ENSDORG00000011025) ENSDORG00000024543 #8 Clk4 (ENSDORG00000009760) #8 Zfp354a (ENSDORG00000009396) #9 Prop1 (ENSDORG00000009397) #12 Zfp454 (ENSDORG00000029196) #14 Grm6 (ENSDORG00000029560) #15 Zfp2 (ENSDORG00000005936) Zfp354c (ENSDORG00000015602) #17 Adamts2 (ENSDORG00000015603) #18 Rufy1 (ENSDORG00000005452) #19 Hnrnph1 (ENSDORG00000005453) #20 ENSDORG00000024643 Canx (ENSDORG00000002108) #21 Maml1 (ENSDORG00000023567) #22 ENSDORG00000025410 #23 Mgat4b (ENSDORG00000007019) #24 Sqstm1 (ENSDORG00000014852) #25 Tbc1d9b (ENSDORG00000014854) #26 Rnf130 (ENSDORG00000012990) #27 Rasgef1c (ENSDORG00000003918) Mapk9 (ENSDORG00000003921) #28 Gfpt2 (ENSDORG00000003922) #29 Cnot6 (ENSDORG00000001708) #31 Scgb3a1 (ENSDORG00000027422) #32 Flt4 (ENSDORG00000012877) #33 ENSDORG00000024367 ENSDORG00000024307 ENSDORG00000023565 ENSDORG00000028273 Lagomorpha ANCESTRAL SPECIES 511 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 Rabbit MODERN SPECIES 160 MAML1 (ENSOCUG00000015101) #22 Pika MODERN SPECIES 9453 CANX (ENSOPRG00000007562) #21 MAML1 (ENSOPRG00000007592) #22 Tree shrew MODERN SPECIES 1184 ENSTBEG00000008651 #22 Primates ANCESTRAL SPECIES 8 ENSGT00840000130327 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00970000194357.a Strepsirrhini ANCESTRAL SPECIES 5 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a.k #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Lemuriformes ANCESTRAL SPECIES 25 ENSGT00940000159977 ENSGT00390000018596.A.b ENSGT00940000160536 ENSGT00390000013236 ENSGT00940000155271 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a.k #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Mouse lemur MODERN SPECIES 10 CIDEA (ENSMICG00000007492) IMPA2 (ENSMICG00000004775) ENSMICG00000001930 GNAL (ENSMICG00000001922) ZNF454 (ENSMICG00000032054) #14 GRM6 (ENSMICG00000000566) #15 ZNF879 (ENSMICG00000033568) #16 ZNF354C (ENSMICG00000034512) #17 ADAMTS2 (ENSMICG00000010523) #18 RUFY1 (ENSMICG00000012324) #19 ENSMICG00000033979 #20 ENSMICG00000027131 CBY3 (ENSMICG00000036379) CANX (ENSMICG00000003149) #21 ENSMICG00000007943 MAML1 (ENSMICG00000034960) #22 LTC4S (ENSMICG00000044735) #23 MGAT4B (ENSMICG00000006533) #24 SQSTM1 (ENSMICG00000006544) #25 ENSMICG00000002549 TBC1D9B (ENSMICG00000036875) #26 RNF130 (ENSMICG00000043962) #27 MAPK9 (ENSMICG00000015900) #28 GFPT2 (ENSMICG00000015921) #29 ENSMICG00000013018 #31 SCGB3A1 (ENSMICG00000001211) #32 FLT4 (ENSMICG00000005770) #33 RBM47 (ENSMICG00000026417) CHRNA9 (ENSMICG00000035894) RHOH (ENSMICG00000027779) ENSMICG00000038258 Lemuriformes_a ANCESTRAL SPECIES 32 ENSGT00940000159977 ENSGT00390000018596.A.b ENSGT00940000160536 ENSGT00390000013236 ENSGT00940000155271 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a.k #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Greater bamboo lemur MODERN SPECIES 376 CIDEA (ENSPSMG00000012085) IMPA2 (ENSPSMG00000012070) MPPE1 (ENSPSMG00000012056) GNAL (ENSPSMG00000012017) ZFP2 (ENSPSMG00000011924) ZNF454 (ENSPSMG00000011918) #14 GRM6 (ENSPSMG00000011907) #15 ZNF879 (ENSPSMG00000011864) #16 ZNF354C (ENSPSMG00000011861) #17 ADAMTS2 (ENSPSMG00000011850) #18 RUFY1 (ENSPSMG00000011809) #19 HNRNPH1 (ENSPSMG00000011572) #20 CBY3 (ENSPSMG00000011344) CANX (ENSPSMG00000011331) #21 MAML1 (ENSPSMG00000011314) #22 LTC4S (ENSPSMG00000011309) #23 MGAT4B (ENSPSMG00000011272) #24 SQSTM1 (ENSPSMG00000011174) #25 ENSPSMG00000011137 TBC1D9B (ENSPSMG00000011075) #26 RNF130 (ENSPSMG00000010915) #27 Coquerels sifaka MODERN SPECIES 816 RUFY1 (ENSPCOG00000002762) #19 HNRNPH1 (ENSPCOG00000016762) #20 CBY3 (ENSPCOG00000003073) ENSPCOG00000015157 #21 MAML1 (ENSPCOG00000020980) #22 LTC4S (ENSPCOG00000019610) #23 MGAT4B (ENSPCOG00000014500) #24 SQSTM1 (ENSPCOG00000019361) #25 ENSPCOG00000013902 ENSPCOG00000018302 TBC1D9B (ENSPCOG00000020338) #26 Bushbaby MODERN SPECIES 261 AFAP1 (ENSOGAG00000009378) ABLIM2 (ENSOGAG00000007881) SH3TC1 (ENSOGAG00000007883) HTRA3 (ENSOGAG00000025277) ACOX3 (ENSOGAG00000002245) TRMT44 (ENSOGAG00000002246) CPZ (ENSOGAG00000002249) HMX1 (ENSOGAG00000032103) ADRA2C (ENSOGAG00000033833) ZNF354C (ENSOGAG00000011077) #17 ADAMTS2 (ENSOGAG00000011081) #18 RUFY1 (ENSOGAG00000012620) #19 HNRNPH1 (ENSOGAG00000012631) #20 ENSOGAG00000029984 CANX (ENSOGAG00000015727) #21 MAML1 (ENSOGAG00000024232) #22 LTC4S (ENSOGAG00000024180) #23 MGAT4B (ENSOGAG00000016831) #24 SQSTM1 (ENSOGAG00000002151) #25 MRNIP (ENSOGAG00000002152) TBC1D9B (ENSOGAG00000009796) #26 RNF130 (ENSOGAG00000009805) #27 RASGEF1C (ENSOGAG00000016873) MAPK9 (ENSOGAG00000016875) #28 GFPT2 (ENSOGAG00000016878) #29 CNOT6 (ENSOGAG00000032470) #31 SCGB3A1 (ENSOGAG00000001706) #32 FLT4 (ENSOGAG00000001707) #33 ENSOGAG00000028687 ENSOGAG00000025685 ZNF354B (ENSOGAG00000027501) #13 Haplorrhini ANCESTRAL SPECIES 4 ENSGT00840000130327 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00970000194357.a ENSGT01100000263486.a.b.a.a.a.a.a.a Simiiformes ANCESTRAL SPECIES 6 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00910000147061 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00970000194357.a ENSGT01100000263486.a.b.a.a.a.a.a.a Catarrhini ANCESTRAL SPECIES 7 ENSGT00910000147061 ENSGT00940000154944.e.b ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00950000183043.b.b ENSGT00940000153137.a.b.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00950000182915.a.a.a #21 ENSGT01030000236180 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00940000174020 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00910000147177 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Hominoidea ANCESTRAL SPECIES 8 ENSGT00940000156044.u.b ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00950000183043.b.b ENSGT00940000153137.a.b.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00950000182915.a.a.a #21 ENSGT01030000236180 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00940000174020 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00910000147177 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Hominidae ANCESTRAL SPECIES 7 ENSGT00940000156044.u.b ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00950000183043.b.b.m.a ENSGT00940000153137.a.b.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00950000182915.a.a.a #21 ENSGT01030000236180 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a ENSGT00530000063632.B Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT00940000156044.u.b ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00950000183043.b.b.m.a ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00950000182915.a.a.a #21 ENSGT01030000236180 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a ENSGT00530000063632.B ENSGT00940000162750 Gorilla MODERN SPECIES 18 ENSGGOG00000043873 ENSGGOG00000044077 ZFP2 (ENSGGOG00000037928) ZNF454 (ENSGGOG00000022508) #14 GRM6 (ENSGGOG00000011993) #15 ZNF879 (ENSGGOG00000023048) #16 ZNF354C (ENSGGOG00000014245) #17 ADAMTS2 (ENSGGOG00000000816) #18 ENSGGOG00000014985 ENSGGOG00000003557 #19 HNRNPH1 (ENSGGOG00000025844) #20 CBY3 (ENSGGOG00000012023) CANX (ENSGGOG00000008450) #21 ENSGGOG00000026945 ENSGGOG00000040537 MAML1 (ENSGGOG00000028537) #22 LTC4S (ENSGGOG00000027355) #23 MGAT4B (ENSGGOG00000024066) #24 SQSTM1 (ENSGGOG00000026960) #25 MRNIP (ENSGGOG00000014962) TBC1D9B (ENSGGOG00000003028) #26 ENSGGOG00000001137 #27 ENSGGOG00000028113 RASGEF1C (ENSGGOG00000003137) MAPK9 (ENSGGOG00000016519) #28 GFPT2 (ENSGGOG00000010197) #29 CNOT6 (ENSGGOG00000003675) #31 SCGB3A1 (ENSGGOG00000009375) #32 FLT4 (ENSGGOG00000006749) #33 MGAT1 (ENSGGOG00000009610) ZFP62 (ENSGGOG00000001217) Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00940000156044.u.b ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00950000183043.b.b.m.a ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00950000182915.a.a.a #21 ENSGT01030000236180 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a ENSGT00530000063632.B ENSGT00940000162750 Pan ANCESTRAL SPECIES 10 ENSGT00940000154944.e.b ENSGT00940000167867 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00950000183043.b.b.m.a ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00950000182915.a.a.a #21 ENSGT01030000236180 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a ENSGT00530000063632.B ENSGT00940000162750 Chimpanzee MODERN SPECIES 18 ENSPTRG00000045160 ZFP2 (ENSPTRG00000023199) ZNF454 (ENSPTRG00000017611) #14 GRM6 (ENSPTRG00000017612) #15 ZNF879 (ENSPTRG00000041282) #16 ZNF354C (ENSPTRG00000045846) #17 ADAMTS2 (ENSPTRG00000017614) #18 ENSPTRG00000028474 RUFY1 (ENSPTRG00000017616) #19 ENSPTRG00000051626 #20 ENSPTRG00000045474 CBY3 (ENSPTRG00000052485) ENSPTRG00000051338 CANX (ENSPTRG00000017621) #21 ENSPTRG00000045963 MAML1 (ENSPTRG00000033932) #22 LTC4S (ENSPTRG00000017624) #23 MGAT4B (ENSPTRG00000017625) #24 SQSTM1 (ENSPTRG00000017626) #25 MRNIP (ENSPTRG00000017627) TBC1D9B (ENSPTRG00000043585) #26 RNF130 (ENSPTRG00000017629) #27 RASGEF1C (ENSPTRG00000017631) MAPK9 (ENSPTRG00000017633) #28 GFPT2 (ENSPTRG00000017635) #29 CNOT6 (ENSPTRG00000017636) #31 SCGB3A1 (ENSPTRG00000041205) #32 FLT4 (ENSPTRG00000017639) #33 OR2Y1 (ENSPTRG00000028465) MGAT1 (ENSPTRG00000017642) ZFP62 (ENSPTRG00000028464) Bonobo MODERN SPECIES 18 ZNF354B (ENSPPAG00000027268) #13 ENSPPAG00000031584 ZFP2 (ENSPPAG00000015238) ZNF454 (ENSPPAG00000038343) #14 GRM6 (ENSPPAG00000036885) #15 ZNF879 (ENSPPAG00000030668) #16 ZNF354C (ENSPPAG00000041850) #17 ADAMTS2 (ENSPPAG00000026778) #18 ENSPPAG00000039363 RUFY1 (ENSPPAG00000029293) #19 ENSPPAG00000038325 #20 CBY3 (ENSPPAG00000043106) ENSPPAG00000030033 CANX (ENSPPAG00000034073) #21 ENSPPAG00000034104 MAML1 (ENSPPAG00000005302) #22 ENSPPAG00000041541 #23 MGAT4B (ENSPPAG00000033457) #24 SQSTM1 (ENSPPAG00000034309) #25 MRNIP (ENSPPAG00000037015) TBC1D9B (ENSPPAG00000039526) #26 RNF130 (ENSPPAG00000024806) #27 ENSPPAG00000041803 MAPK9 (ENSPPAG00000038007) #28 GFPT2 (ENSPPAG00000028004) #29 CNOT6 (ENSPPAG00000032253) #31 ENSPPAG00000034711 #32 FLT4 (ENSPPAG00000042176) #33 OR2Y1 (ENSPPAG00000019437) MGAT1 (ENSPPAG00000005759) ZFP62 (ENSPPAG00000041640) Human MODERN SPECIES 17 COL23A1 (ENSG00000050767) CLK4 (ENSG00000113240) #8 MSANTD5 (ENSG00000285891) ZNF354A (ENSG00000169131) #9 ZNF354B (ENSG00000178338) #13 ZFP2 (ENSG00000198939) ZNF454 (ENSG00000178187) #14 GRM6 (ENSG00000113262) #15 ZNF879 (ENSG00000234284) #16 ZNF354C (ENSG00000177932) #17 ADAMTS2 (ENSG00000087116) #18 RUFY1 (ENSG00000176783) #19 HNRNPH1 (ENSG00000169045) #20 CBY3 (ENSG00000204659) CANX (ENSG00000127022) #21 MAML1 (ENSG00000161021) #22 LTC4S (ENSG00000213316) #23 MGAT4B (ENSG00000161013) #24 SQSTM1 (ENSG00000161011) #25 MRNIP (ENSG00000161010) TBC1D9B (ENSG00000197226) #26 RNF130 (ENSG00000113269) #27 RASGEF1C (ENSG00000146090) MAPK9 (ENSG00000050748) #28 GFPT2 (ENSG00000131459) #29 CNOT6 (ENSG00000113300) #31 SCGB3A1 (ENSG00000161055) #32 FLT4 (ENSG00000037280) #33 OR2Y1 (ENSG00000174339) MGAT1 (ENSG00000131446) ZFP62 (ENSG00000196670) Orangutan MODERN SPECIES 18 ENSPPYG00000016112 ZNF354B (ENSPPYG00000016113) #13 ZFP2 (ENSPPYG00000016115) ZNF454 (ENSPPYG00000041561) #14 GRM6 (ENSPPYG00000016116) #15 ZNF879 (ENSPPYG00000029650) #16 ZNF354C (ENSPPYG00000016117) #17 ADAMTS2 (ENSPPYG00000016118) #18 ENSPPYG00000035848 RUFY1 (ENSPPYG00000016120) #19 ENSPPYG00000040835 ENSPPYG00000016121 #20 ENSPPYG00000031721 CANX (ENSPPYG00000016126) #21 CBY3 (ENSPPYG00000016124) MAML1 (ENSPPYG00000016127) #22 LTC4S (ENSPPYG00000016128) #23 MGAT4B (ENSPPYG00000016129) #24 SQSTM1 (ENSPPYG00000016130) #25 MRNIP (ENSPPYG00000016131) TBC1D9B (ENSPPYG00000016132) #26 RNF130 (ENSPPYG00000016133) #27 RASGEF1C (ENSPPYG00000016134) MAPK9 (ENSPPYG00000016135) #28 GFPT2 (ENSPPYG00000016136) #29 CNOT6 (ENSPPYG00000016137) #31 ENSPPYG00000037258 ENSPPYG00000016138 #32 FLT4 (ENSPPYG00000016139) #33 MGAT1 (ENSPPYG00000016140) ZFP62 (ENSPPYG00000016141) Gibbon MODERN SPECIES 11 CLK4 (ENSNLEG00000015794) #8 ZNF354B (ENSNLEG00000001411) #13 ENSNLEG00000031458 ENSNLEG00000001427 ZFP2 (ENSNLEG00000001415) ZNF454 (ENSNLEG00000001430) #14 GRM6 (ENSNLEG00000001434) #15 ZNF879 (ENSNLEG00000001439) #16 ZNF354C (ENSNLEG00000001445) #17 ENSNLEG00000001449 #18 RUFY1 (ENSNLEG00000001488) #19 ENSNLEG00000026658 #20 CBY3 (ENSNLEG00000001503) ENSNLEG00000035116 CANX (ENSNLEG00000001508) #21 MAML1 (ENSNLEG00000001678) #22 ENSNLEG00000001697 #23 MGAT4B (ENSNLEG00000001699) #24 ENSNLEG00000033839 ENSNLEG00000001801 #25 MRNIP (ENSNLEG00000001806) TBC1D9B (ENSNLEG00000001836) #26 ENSNLEG00000001941 #27 RASGEF1C (ENSNLEG00000001943) MAPK9 (ENSNLEG00000001965) #28 GFPT2 (ENSNLEG00000002178) #29 ENSNLEG00000031368 CNOT6 (ENSNLEG00000002322) #31 ENSNLEG00000027996 SCGB3A1 (ENSNLEG00000002365) #32 FLT4 (ENSNLEG00000002370) #33 Cercopithecidae ANCESTRAL SPECIES 5 ENSGT00940000154944.e.b ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00950000183043.b.b ENSGT00940000166214 ENSGT00940000153137.a.b.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00950000182915.a.a.a #21 ENSGT01030000236180 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00940000174020 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00910000147177 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Cercopithecinae ANCESTRAL SPECIES 9 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00950000183043.b.a.g.a ENSGT00950000183043.b.b ENSGT00940000166214 ENSGT00940000153137.a.b.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00950000182915.a.a.a #21 ENSGT01030000236180 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00940000174020 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00910000147177 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Vervet Monkey MODERN SPECIES 15 PHYKPL (ENSCSAG00000008619) CLK4 (ENSCSAG00000008600) #8 ZNF354A (ENSCSAG00000008589) #9 ZNF354B (ENSCSAG00000008583) #13 ZFP2 (ENSCSAG00000008564) ZNF454 (ENSCSAG00000008562) #14 GRM6 (ENSCSAG00000008547) #15 ZNF879 (ENSCSAG00000008491) #16 ZNF354C (ENSCSAG00000008484) #17 ADAMTS2 (ENSCSAG00000008473) #18 RUFY1 (ENSCSAG00000008458) #19 HNRNPH1 (ENSCSAG00000008415) #20 ENSCSAG00000008405 CBY3 (ENSCSAG00000008395) CANX (ENSCSAG00000008385) #21 MAML1 (ENSCSAG00000008369) #22 LTC4S (ENSCSAG00000008363) #23 MGAT4B (ENSCSAG00000008346) #24 SQSTM1 (ENSCSAG00000008334) #25 MRNIP (ENSCSAG00000008324) TBC1D9B (ENSCSAG00000008307) #26 RNF130 (ENSCSAG00000008295) #27 RASGEF1C (ENSCSAG00000008274) MAPK9 (ENSCSAG00000008264) #28 GFPT2 (ENSCSAG00000008225) #29 CNOT6 (ENSCSAG00000008165) #31 SCGB3A1 (ENSCSAG00000008157) #32 FLT4 (ENSCSAG00000008130) #33 MGAT1 (ENSCSAG00000019727) ZFP62 (ENSCSAG00000008052) BTNL8 (ENSCSAG00000008045) Cercopithecinae_a ANCESTRAL SPECIES 9 ENSGT00910000147061 ENSGT00940000154944.e.b ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000166214 ENSGT00940000153137.a.b.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00950000182915.a.a.a #21 ENSGT01030000236180 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00940000174020 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00910000147177 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Cercopithecinae_b ANCESTRAL SPECIES 4 ENSGT00940000162570 #13 ENSGT00910000147061 ENSGT00940000154944.e.b ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000166214 ENSGT00940000153137.a.b.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00940000174020 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00910000147177 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Olive baboon MODERN SPECIES 15 COL23A1 (ENSPANG00000006848) CLK4 (ENSPANG00000014774) #8 MSANTD5 (ENSPANG00000042990) ZNF354A (ENSPANG00000032762) #9 ZNF354B (ENSPANG00000002751) #13 ZNF454 (ENSPANG00000009509) #14 GRM6 (ENSPANG00000006031) #15 ZNF879 (ENSPANG00000032345) #16 ADAMTS2 (ENSPANG00000005312) #18 ENSPANG00000049297 ENSPANG00000040974 RUFY1 (ENSPANG00000019170) #19 HNRNPH1 (ENSPANG00000013058) #20 CBY3 (ENSPANG00000012012) CANX (ENSPANG00000013567) #21 MAML1 (ENSPANG00000009297) #22 ENSPANG00000044272 #23 MGAT4B (ENSPANG00000009339) #24 ENSPANG00000038696 SQSTM1 (ENSPANG00000012011) #25 MRNIP (ENSPANG00000002750) TBC1D9B (ENSPANG00000003016) #26 RNF130 (ENSPANG00000030752) #27 RASGEF1C (ENSPANG00000003726) MAPK9 (ENSPANG00000013251) #28 GFPT2 (ENSPANG00000016006) #29 CNOT6 (ENSPANG00000016191) #31 ENSPANG00000029867 SCGB3A1 (ENSPANG00000032680) #32 FLT4 (ENSPANG00000016325) #33 ENSPANG00000050685 Cercopithecinae_d ANCESTRAL SPECIES 115 ENSGT00940000162570 #13 ENSGT00910000147061 ENSGT00940000154944.e.b ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000166214 ENSGT00940000153137.a.b.a ENSGT00940000153299.c.b.a.b.a.a.b ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00910000147177 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00970000194357.a Sooty mangabey MODERN SPECIES 157 ENSCATG00000020646 ENSCATG00000025765 ZFP2 (ENSCATG00000029817) ZNF454 (ENSCATG00000031926) #14 GRM6 (ENSCATG00000042346) #15 ZNF879 (ENSCATG00000029400) #16 ZNF354C (ENSCATG00000039049) #17 ADAMTS2 (ENSCATG00000024805) #18 RUFY1 (ENSCATG00000012248) #19 HNRNPH1 (ENSCATG00000034747) #20 ENSCATG00000037633 ENSCATG00000039249 CBY3 (ENSCATG00000038136) ENSCATG00000030870 CANX (ENSCATG00000024926) #21 MAML1 (ENSCATG00000035850) #22 MGAT4B (ENSCATG00000021105) #24 LTC4S (ENSCATG00000029442) #23 SQSTM1 (ENSCATG00000034356) #25 MRNIP (ENSCATG00000038409) TBC1D9B (ENSCATG00000037328) #26 RNF130 (ENSCATG00000039524) #27 RASGEF1C (ENSCATG00000010154) ENSCATG00000000228 MAPK9 (ENSCATG00000033689) #28 GFPT2 (ENSCATG00000033682) #29 ENSCATG00000034666 CNOT6 (ENSCATG00000042014) #31 ENSCATG00000037590 SCGB3A1 (ENSCATG00000035525) #32 FLT4 (ENSCATG00000035362) #33 Drill MODERN SPECIES 603 ZNF354A (ENSMLEG00000038806) #9 ENSMLEG00000043968 ZNF354B (ENSMLEG00000037960) #13 ENSMLEG00000003410 ZFP2 (ENSMLEG00000014884) ZNF454 (ENSMLEG00000039955) #14 GRM6 (ENSMLEG00000031526) #15 ZNF879 (ENSMLEG00000044457) #16 ZNF354C (ENSMLEG00000029929) #17 ADAMTS2 (ENSMLEG00000037514) #18 RUFY1 (ENSMLEG00000042265) #19 ENSMLEG00000040142 #20 ENSMLEG00000027731 CBY3 (ENSMLEG00000028373) CANX (ENSMLEG00000041092) #21 MAML1 (ENSMLEG00000033787) #22 LTC4S (ENSMLEG00000039124) #23 MGAT4B (ENSMLEG00000030238) #24 SQSTM1 (ENSMLEG00000037546) #25 MRNIP (ENSMLEG00000041022) TBC1D9B (ENSMLEG00000029660) #26 RNF130 (ENSMLEG00000044175) #27 RASGEF1C (ENSMLEG00000034495) MAPK9 (ENSMLEG00000027658) #28 GFPT2 (ENSMLEG00000040967) #29 ENSMLEG00000039942 CNOT6 (ENSMLEG00000010555) #31 FLT4 (ENSMLEG00000028787) #33 ENSMLEG00000029740 MGAT1 (ENSMLEG00000000882) ZFP62 (ENSMLEG00000011033) Macaca ANCESTRAL SPECIES 7 ENSGT00940000162570 #13 ENSGT00910000147061 ENSGT00940000154944.e.b ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000166214 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236180 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00910000147177 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a ENSGT00530000063632.B Pig-tailed macaque MODERN SPECIES 591 ENSMNEG00000041417 ZFP2 (ENSMNEG00000038326) ZNF454 (ENSMNEG00000002699) #14 GRM6 (ENSMNEG00000044389) #15 ZNF879 (ENSMNEG00000030724) #16 ZNF354C (ENSMNEG00000034678) #17 ADAMTS2 (ENSMNEG00000032393) #18 RUFY1 (ENSMNEG00000036092) #19 HNRNPH1 (ENSMNEG00000032375) #20 ENSMNEG00000044166 CBY3 (ENSMNEG00000037134) ENSMNEG00000004160 ENSMNEG00000033462 CANX (ENSMNEG00000038823) #21 ENSMNEG00000020821 MAML1 (ENSMNEG00000031843) #22 LTC4S (ENSMNEG00000042676) #23 MGAT4B (ENSMNEG00000042915) #24 SQSTM1 (ENSMNEG00000021850) #25 MRNIP (ENSMNEG00000032717) TBC1D9B (ENSMNEG00000036227) #26 RNF130 (ENSMNEG00000030254) #27 RASGEF1C (ENSMNEG00000040323) MAPK9 (ENSMNEG00000041405) #28 GFPT2 (ENSMNEG00000030936) #29 ENSMNEG00000002473 CNOT6 (ENSMNEG00000038565) #31 SCGB3A1 (ENSMNEG00000041974) #32 FLT4 (ENSMNEG00000030424) #33 OR2Y1 (ENSMNEG00000026132) MGAT1 (ENSMNEG00000013091) Macaca_a ANCESTRAL SPECIES 8 ENSGT00840000130327 ENSGT00940000161487 #9 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000166214 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236180 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a ENSGT00530000063632.B ENSGT00940000162750 Crab-eating macaque MODERN SPECIES 16 CLK4 (ENSMFAG00000040140) #8 MSANTD5 (ENSMFAG00000055801) ZNF354A (ENSMFAG00000013407) #9 ZNF354B (ENSMFAG00000029623) #13 ZFP2 (ENSMFAG00000014508) ZNF454 (ENSMFAG00000043337) #14 GRM6 (ENSMFAG00000002639) #15 ENSMFAG00000050028 ZNF879 (ENSMFAG00000039136) #16 ADAMTS2 (ENSMFAG00000002799) #18 RUFY1 (ENSMFAG00000033376) #19 HNRNPH1 (ENSMFAG00000028267) #20 ENSMFAG00000033075 CANX (ENSMFAG00000031934) #21 CBY3 (ENSMFAG00000042944) MAML1 (ENSMFAG00000044212) #22 ENSMFAG00000043066 #23 MGAT4B (ENSMFAG00000029205) #24 SQSTM1 (ENSMFAG00000032992) #25 MRNIP (ENSMFAG00000040511) TBC1D9B (ENSMFAG00000000062) #26 RNF130 (ENSMFAG00000019863) #27 ENSMFAG00000061594 ENSMFAG00000065456 MAPK9 (ENSMFAG00000042461) #28 GFPT2 (ENSMFAG00000045396) #29 ENSMFAG00000054397 CNOT6 (ENSMFAG00000030867) #31 SCGB3A1 (ENSMFAG00000040059) #32 FLT4 (ENSMFAG00000033698) #33 OR2Y1 (ENSMFAG00000030133) Rhesus MODERN SPECIES 16 CLK4 (ENSMMUG00000004002) #8 MSANTD5 (ENSMMUG00000050539) ZNF354A (ENSMMUG00000041519) #9 ZNF354B (ENSMMUG00000008976) #13 ZFP2 (ENSMMUG00000008978) ZNF354C (ENSMMUG00000002485) #17 GRM6 (ENSMMUG00000017587) #15 ADAMTS2 (ENSMMUG00000002488) #18 RUFY1 (ENSMMUG00000018666) #19 HNRNPH1 (ENSMMUG00000010843) #20 ENSMMUG00000063082 CBY3 (ENSMMUG00000043680) ENSMMUG00000058524 CANX (ENSMMUG00000012370) #21 ENSMMUG00000050372 MAML1 (ENSMMUG00000012371) #22 LTC4S (ENSMMUG00000012373) #23 MGAT4B (ENSMMUG00000012374) #24 SQSTM1 (ENSMMUG00000021055) #25 MRNIP (ENSMMUG00000021056) TBC1D9B (ENSMMUG00000021057) #26 RNF130 (ENSMMUG00000013347) #27 RASGEF1C (ENSMMUG00000000635) MAPK9 (ENSMMUG00000001728) #28 GFPT2 (ENSMMUG00000001731) #29 CNOT6 (ENSMMUG00000018690) #31 SCGB3A1 (ENSMMUG00000018692) #32 FLT4 (ENSMMUG00000018693) #33 OR2Y1 (ENSMMUG00000009136) MGAT1 (ENSMMUG00000047880) ZFP62 (ENSMMUG00000042832) Rhinopithecus ANCESTRAL SPECIES 447 ENSGT00940000166214 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 Golden snub-nosed monkey MODERN SPECIES 2239 ZNF354B (ENSRROG00000029239) #13 ENSRROG00000021202 ENSRROG00000045092 ZFP2 (ENSRROG00000038496) ZNF454 (ENSRROG00000029318) #14 GRM6 (ENSRROG00000044108) #15 ZNF879 (ENSRROG00000030257) #16 ZNF354C (ENSRROG00000039027) #17 ADAMTS2 (ENSRROG00000041064) #18 RUFY1 (ENSRROG00000041055) #19 ENSRROG00000035613 #20 ENSRROG00000027548 ENSRROG00000036327 CBY3 (ENSRROG00000034035) CANX (ENSRROG00000034381) #21 MAML1 (ENSRROG00000039755) #22 LTC4S (ENSRROG00000033957) #23 MGAT4B (ENSRROG00000038612) #24 SQSTM1 (ENSRROG00000036129) #25 MRNIP (ENSRROG00000030855) TBC1D9B (ENSRROG00000043130) #26 RNF130 (ENSRROG00000017609) #27 ENSRROG00000038764 RASGEF1C (ENSRROG00000026189) MAPK9 (ENSRROG00000027518) #28 Black snub-nosed monkey MODERN SPECIES 2515 ENSRBIG00000031883 CBY3 (ENSRBIG00000027813) CANX (ENSRBIG00000020901) #21 MAML1 (ENSRBIG00000044794) #22 LTC4S (ENSRBIG00000043907) #23 MGAT4B (ENSRBIG00000044569) #24 SQSTM1 (ENSRBIG00000040424) #25 MRNIP (ENSRBIG00000010959) TBC1D9B (ENSRBIG00000034540) #26 RNF130 (ENSRBIG00000042845) #27 RASGEF1C (ENSRBIG00000038870) Platyrrhini ANCESTRAL SPECIES 19 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000154173.A.a.b ENSGT00940000159358 #33 ENSGT00420000029848.A #32 ENSGT00900000143807 ENSGT00940000158978 #31 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000162292 #12 ENSGT00940000162330 #11 ENSGT00940000161487 #9 ENSGT00940000160245 #8 ENSGT00940000162238 ENSGT00940000159222 Cebidae ANCESTRAL SPECIES 47 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000154173.A.a.b ENSGT00940000159358 #33 ENSGT00420000029848.A #32 ENSGT00900000143807 ENSGT00940000158978 #31 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 Cebidae_a ANCESTRAL SPECIES 113 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000154173.A.a.b ENSGT00940000159358 #33 ENSGT00420000029848.A #32 ENSGT00940000158978 #31 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 Bolivian squirrel monkey MODERN SPECIES 237 ZFP2 (ENSSBOG00000020675) ZNF454 (ENSSBOG00000028339) #14 GRM6 (ENSSBOG00000024819) #15 ZNF879 (ENSSBOG00000022474) #16 ZNF354C (ENSSBOG00000015814) #17 ADAMTS2 (ENSSBOG00000025193) #18 ENSSBOG00000025755 FLT4 (ENSSBOG00000031031) #33 SCGB3A1 (ENSSBOG00000027262) #32 ENSSBOG00000027641 CNOT6 (ENSSBOG00000030494) #31 RUFY1 (ENSSBOG00000031721) #19 HNRNPH1 (ENSSBOG00000022306) #20 CBY3 (ENSSBOG00000023009) CANX (ENSSBOG00000034866) #21 MAML1 (ENSSBOG00000021790) #22 ENSSBOG00000028968 #23 ENSSBOG00000014015 #24 SQSTM1 (ENSSBOG00000024318) #25 MRNIP (ENSSBOG00000023818) TBC1D9B (ENSSBOG00000027386) #26 ENSSBOG00000027608 RNF130 (ENSSBOG00000023510) #27 ENSSBOG00000021880 RASGEF1C (ENSSBOG00000030445) MAPK9 (ENSSBOG00000019251) #28 GFPT2 (ENSSBOG00000019062) #29 Capuchin MODERN SPECIES 623 ENSCCAG00000027696 CBY3 (ENSCCAG00000031282) CANX (ENSCCAG00000029294) #21 MAML1 (ENSCCAG00000028130) #22 LTC4S (ENSCCAG00000026797) #23 MGAT4B (ENSCCAG00000035998) #24 SQSTM1 (ENSCCAG00000034206) #25 MRNIP (ENSCCAG00000028973) TBC1D9B (ENSCCAG00000033711) #26 RNF130 (ENSCCAG00000034314) #27 ENSCCAG00000026775 ENSCCAG00000028190 RASGEF1C (ENSCCAG00000024499) MAPK9 (ENSCCAG00000038038) #28 ENSCCAG00000036076 GFPT2 (ENSCCAG00000030175) #29 Marmoset MODERN SPECIES 11 ZFP62 (ENSCJAG00000018839) MGAT1 (ENSCJAG00000046208) ZNF354B (ENSCJAG00000018848) #13 ZNF454 (ENSCJAG00000018857) #14 GRM6 (ENSCJAG00000018865) #15 ZNF879 (ENSCJAG00000018904) #16 ZNF354C (ENSCJAG00000086065) #17 ADAMTS2 (ENSCJAG00000018919) #18 FLT4 (ENSCJAG00000009696) #33 SCGB3A1 (ENSCJAG00000009787) #32 ENSCJAG00000043414 CNOT6 (ENSCJAG00000009795) #31 RUFY1 (ENSCJAG00000009844) #19 ENSCJAG00000009931 #20 CANX (ENSCJAG00000009989) #21 MAML1 (ENSCJAG00000048349) #22 LTC4S (ENSCJAG00000010116) #23 MGAT4B (ENSCJAG00000010124) #24 SQSTM1 (ENSCJAG00000010152) #25 MRNIP (ENSCJAG00000010163) TBC1D9B (ENSCJAG00000010170) #26 RNF130 (ENSCJAG00000010215) #27 RASGEF1C (ENSCJAG00000010277) ENSCJAG00000044504 MAPK9 (ENSCJAG00000010293) #28 GFPT2 (ENSCJAG00000010359) #29 SIMC1 (ENSCJAG00000012354) KIAA1191 (ENSCJAG00000012337) ARL10 (ENSCJAG00000012332) NOP16 (ENSCJAG00000057017) ENSCJAG00000084164 Mas night monkey MODERN SPECIES 911 ZNF454 (ENSANAG00000037002) #14 GRM6 (ENSANAG00000032011) #15 ZNF354C (ENSANAG00000021816) #17 ADAMTS2 (ENSANAG00000032180) #18 ENSANAG00000027694 FLT4 (ENSANAG00000030669) #33 SCGB3A1 (ENSANAG00000025025) #32 CNOT6 (ENSANAG00000030436) #31 ENSANAG00000013483 ENSANAG00000028928 ENSANAG00000030413 RUFY1 (ENSANAG00000031581) #19 HNRNPH1 (ENSANAG00000035312) #20 CBY3 (ENSANAG00000024701) CANX (ENSANAG00000025740) #21 MAML1 (ENSANAG00000037400) #22 LTC4S (ENSANAG00000024498) #23 MGAT4B (ENSANAG00000036256) #24 SQSTM1 (ENSANAG00000036320) #25 MRNIP (ENSANAG00000030629) TBC1D9B (ENSANAG00000033570) #26 RNF130 (ENSANAG00000033140) #27 RASGEF1C (ENSANAG00000036683) MAPK9 (ENSANAG00000024448) #28 GFPT2 (ENSANAG00000025129) #29 PROP1 (ENSANAG00000033421) #12 ZNF354A (ENSANAG00000022081) #9 CLK4 (ENSANAG00000022160) #8 COL23A1 (ENSANAG00000037234) PHYKPL (ENSANAG00000035175) ENSANAG00000026991 Tarsier MODERN SPECIES 2078 CANX (ENSTSYG00000031071) #21 MAML1 (ENSTSYG00000027426) #22 Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000178460 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183201.b.b.b.a #22 Hedgehog MODERN SPECIES 5339 MAML1 (ENSEEUG00000011873) #22 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000178460 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 Artiodactyla ANCESTRAL SPECIES 8 ENSGT00940000160245 #8 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178460 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Suina ANCESTRAL SPECIES 11 ENSGT00940000160245 #8 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178460 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Chacoan peccary MODERN SPECIES 203 CLK4 (ENSCWAG00000000896) #8 ZNF354A (ENSCWAG00000000870) #9 ENSCWAG00000000855 #11 PROP1 (ENSCWAG00000000841) #12 ZNF354B (ENSCWAG00000000786) #13 ZFP2 (ENSCWAG00000000774) ZNF454 (ENSCWAG00000000753) #14 GRM6 (ENSCWAG00000000721) #15 ZNF879 (ENSCWAG00000000708) #16 ZNF354C (ENSCWAG00000000692) #17 ADAMTS2 (ENSCWAG00000000631) #18 RUFY1 (ENSCWAG00000000548) #19 HNRNPH1 (ENSCWAG00000000465) #20 ENSCWAG00000000440 CANX (ENSCWAG00000000423) #21 MAML1 (ENSCWAG00000000338) #22 LTC4S (ENSCWAG00000000309) #23 MGAT4B (ENSCWAG00000000289) #24 SQSTM1 (ENSCWAG00000000263) #25 MRNIP (ENSCWAG00000000234) TBC1D9B (ENSCWAG00000000150) #26 RNF130 (ENSCWAG00000000068) #27 RASGEF1C (ENSCWAG00000021970) MAPK9 (ENSCWAG00000021969) #28 GFPT2 (ENSCWAG00000021968) #29 CNOT6 (ENSCWAG00000021966) #31 ENSCWAG00000021965 SCGB3A1 (ENSCWAG00000021964) #32 FLT4 (ENSCWAG00000021963) #33 ENSCWAG00000021962 Pig MODERN SPECIES 10 PROP1 (ENSSSCG00000029569) #12 MSANTD5 (ENSSSCG00000042891) ENSSSCG00000034785 ZNF354B (ENSSSCG00000028295) #13 ZFP2 (ENSSSCG00000029380) ZNF454 (ENSSSCG00000027351) #14 GRM6 (ENSSSCG00000014027) #15 ZNF879 (ENSSSCG00000052203) #16 ZNF354C (ENSSSCG00000021640) #17 ADAMTS2 (ENSSSCG00000024043) #18 RUFY1 (ENSSSCG00000014023) #19 HNRNPH1 (ENSSSCG00000014022) #20 ENSSSCG00000063154 ENSSSCG00000014021 CANX (ENSSSCG00000014020) #21 MAML1 (ENSSSCG00000014019) #22 LTC4S (ENSSSCG00000028488) #23 MGAT4B (ENSSSCG00000014017) #24 SQSTM1 (ENSSSCG00000014016) #25 ENSSSCG00000014015 TBC1D9B (ENSSSCG00000014014) #26 ENSSSCG00000055787 RNF130 (ENSSSCG00000057993) #27 RASGEF1C (ENSSSCG00000014011) MAPK9 (ENSSSCG00000014010) #28 GFPT2 (ENSSSCG00000014012) #29 ENSSSCG00000059175 CNOT6 (ENSSSCG00000014009) #31 ENSSSCG00000049258 SCGB3A1 (ENSSSCG00000014008) #32 FLT4 (ENSSSCG00000014007) #33 Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT00940000159618 ENSGT00940000154494.a.b ENSGT00950000182843.b ENSGT00940000159380 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00940000162292 #12 ENSGT00940000162330 #11 Camelidae ANCESTRAL SPECIES 57 ENSGT00940000160245 #8 ENSGT00940000161487 #9 ENSGT00940000162292 #12 ENSGT00940000162330 #11 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000159358 #33 Alpaca MODERN SPECIES 1422 ENSVPAG00000012315 #22 Arabian camel MODERN SPECIES 14 CLK4 (ENSCDRG00005007120) #8 ZNF354A (ENSCDRG00005007068) #9 PROP1 (ENSCDRG00005007026) #12 ENSCDRG00005007004 #11 ZNF354B (ENSCDRG00005006982) #13 ZFP2 (ENSCDRG00005006933) ZNF454 (ENSCDRG00005006909) #14 GRM6 (ENSCDRG00005006835) #15 ZNF879 (ENSCDRG00005006793) #16 ZNF354C (ENSCDRG00005006750) #17 ADAMTS2 (ENSCDRG00005005953) #18 RUFY1 (ENSCDRG00005005851) #19 HNRNPH1 (ENSCDRG00005005774) #20 ENSCDRG00005005737 CANX (ENSCDRG00005005708) #21 MAML1 (ENSCDRG00005005672) #22 LTC4S (ENSCDRG00005005617) #23 MGAT4B (ENSCDRG00005005565) #24 SQSTM1 (ENSCDRG00005005528) #25 MRNIP (ENSCDRG00005005511) ENSCDRG00005005487 #26 ENSCDRG00005005418 #26 RNF130 (ENSCDRG00005005219) #27 RASGEF1C (ENSCDRG00005005101) MAPK9 (ENSCDRG00005004915) #28 GFPT2 (ENSCDRG00005004782) #29 CNOT6 (ENSCDRG00005004730) #31 FLT4 (ENSCDRG00005004434) #33 FAM110C (ENSCDRG00005004377) ENSCDRG00005004355 ENSCDRG00005004311 Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00940000159618 ENSGT00940000154494.a.b ENSGT00950000182843.b ENSGT00940000159380 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00940000162292 #12 ENSGT00940000162330 #11 Cetacea ANCESTRAL SPECIES 1 ENSGT00940000159618 ENSGT00940000154494.a.b ENSGT00950000182843.b ENSGT00940000159380 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00950000184876 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00940000162292 #12 Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000159618 ENSGT00940000154494.a.b ENSGT00950000182843.b ENSGT00940000159380 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00950000184876 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00940000162292 #12 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000159618 ENSGT00940000154494.a.b ENSGT00950000182843.b ENSGT00940000159380 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00950000184876 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00940000162292 #12 Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000154494.a.b ENSGT00950000182843.b ENSGT00940000159380 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000155143.mb.b.a ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT01050000244986.b.b.b.b.d.b.b.b.a.b.b.a ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00950000184876 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00940000162292 #12 Monodontidae ANCESTRAL SPECIES 7 ENSGT00940000154494.a.b ENSGT00950000182843.b ENSGT00940000159380 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000155143.mb.b.a ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT01050000244986.b.b.b.b.d.b.b.b.a.b.b.a ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00950000184876 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00940000162292 #12 Beluga whale MODERN SPECIES 93 JMJD4 (ENSDLEG00000012232) ZNF354B (ENSDLEG00000012249) #13 ZFP2 (ENSDLEG00000012263) ZNF454 (ENSDLEG00000012270) #14 GRM6 (ENSDLEG00000012287) #15 ENSDLEG00000012347 ZNF879 (ENSDLEG00000012354) #16 ZNF354C (ENSDLEG00000012363) #17 ADAMTS2 (ENSDLEG00000012411) #18 ENSDLEG00000012767 ENSDLEG00000012788 RUFY1 (ENSDLEG00000012804) #19 ENSDLEG00000012869 #20 ENSDLEG00000012884 CANX (ENSDLEG00000016884) #21 MAML1 (ENSDLEG00000016920) #22 LTC4S (ENSDLEG00000016932) #23 MGAT4B (ENSDLEG00000016952) #24 SQSTM1 (ENSDLEG00000016971) #25 MRNIP (ENSDLEG00000016990) TBC1D9B (ENSDLEG00000017012) #26 RNF130 (ENSDLEG00000017108) #27 ENSDLEG00000017141 RASGEF1C (ENSDLEG00000017170) MAPK9 (ENSDLEG00000017214) #28 GFPT2 (ENSDLEG00000017242) #29 CNOT6 (ENSDLEG00000017285) #31 FLT4 (ENSDLEG00000017328) #33 Narwhal MODERN SPECIES 298 SNAP47 (ENSMMNG00015003455) JMJD4 (ENSMMNG00015003436) ZNF354B (ENSMMNG00015003424) #13 ZFP2 (ENSMMNG00015003397) ZNF454 (ENSMMNG00015003376) #14 GRM6 (ENSMMNG00015003345) #15 ENSMMNG00015003325 ZNF879 (ENSMMNG00015003310) #16 ZNF354C (ENSMMNG00015003290) #17 ENSMMNG00015003278 ADAMTS2 (ENSMMNG00015003260) #18 RUFY1 (ENSMMNG00015003190) #19 ENSMMNG00015003071 #20 ENSMMNG00015003017 CANX (ENSMMNG00015002989) #21 MAML1 (ENSMMNG00015002970) #22 ENSMMNG00015002960 LTC4S (ENSMMNG00015002934) #23 MGAT4B (ENSMMNG00015002877) #24 SQSTM1 (ENSMMNG00015002834) #25 MRNIP (ENSMMNG00015002797) TBC1D9B (ENSMMNG00015002749) #26 ENSMMNG00015002734 RNF130 (ENSMMNG00015002719) #27 RASGEF1C (ENSMMNG00015002676) MAPK9 (ENSMMNG00015002611) #28 GFPT2 (ENSMMNG00015002552) #29 CNOT6 (ENSMMNG00015002512) #31 FLT4 (ENSMMNG00015002382) #33 ENSMMNG00015002341 PROP1 (ENSMMNG00015002318) #12 Vaquita MODERN SPECIES 14 WNT9A (ENSPSNG00000007743) PRSS38 (ENSPSNG00000007771) SNAP47 (ENSPSNG00000007830) JMJD4 (ENSPSNG00000007858) ZNF354B (ENSPSNG00000007886) #13 ZFP2 (ENSPSNG00000007917) ZNF454 (ENSPSNG00000007949) #14 GRM6 (ENSPSNG00000007996) #15 ENSPSNG00000008070 ZNF879 (ENSPSNG00000008106) #16 ADAMTS2 (ENSPSNG00000008224) #18 RUFY1 (ENSPSNG00000008611) #19 ENSPSNG00000008738 #20 CBY3 (ENSPSNG00000008816) CANX (ENSPSNG00000008859) #21 MAML1 (ENSPSNG00000008918) #22 ENSPSNG00000008956 LTC4S (ENSPSNG00000008981) #23 MGAT4B (ENSPSNG00000009081) #24 SQSTM1 (ENSPSNG00000009189) #25 MRNIP (ENSPSNG00000009411) TBC1D9B (ENSPSNG00000009691) #26 RNF130 (ENSPSNG00000009870) #27 ENSPSNG00000009979 RASGEF1C (ENSPSNG00000010035) MAPK9 (ENSPSNG00000010316) #28 GFPT2 (ENSPSNG00000010506) #29 CNOT6 (ENSPSNG00000010601) #31 FLT4 (ENSPSNG00000010686) #33 PROP1 (ENSPSNG00000011406) #12 ENSPSNG00000011445 #11 Dolphin MODERN SPECIES 2088 RUFY1 (ENSTTRG00000000468) #19 HNRNPH1 (ENSTTRG00000000470) #20 CANX (ENSTTRG00000000475) #21 MAML1 (ENSTTRG00000000477) #22 Sperm whale MODERN SPECIES 11 SNAP47 (ENSPCTG00005001687) JMJD4 (ENSPCTG00005001672) ZNF354B (ENSPCTG00005001661) #13 ZFP2 (ENSPCTG00005001642) ZNF454 (ENSPCTG00005001630) #14 GRM6 (ENSPCTG00005001608) #15 ENSPCTG00005001587 ZNF879 (ENSPCTG00005001578) #16 ZNF354C (ENSPCTG00005001563) #17 ADAMTS2 (ENSPCTG00005001538) #18 ENSPCTG00005001527 RUFY1 (ENSPCTG00005001444) #19 HNRNPH1 (ENSPCTG00005001402) #20 ENSPCTG00005001383 CANX (ENSPCTG00005001359) #21 MAML1 (ENSPCTG00005001342) #22 LTC4S (ENSPCTG00005001322) #23 MGAT4B (ENSPCTG00005001282) #24 SQSTM1 (ENSPCTG00005001251) #25 MRNIP (ENSPCTG00005001159) TBC1D9B (ENSPCTG00005001115) #26 ENSPCTG00005001087 RNF130 (ENSPCTG00005001071) #27 RASGEF1C (ENSPCTG00005001021) MAPK9 (ENSPCTG00005000942) #28 GFPT2 (ENSPCTG00005000865) #29 CNOT6 (ENSPCTG00005000832) #31 ENSPCTG00005000813 #32 FLT4 (ENSPCTG00005000690) #33 ENSPCTG00005000649 ENSPCTG00005000638 Blue whale MODERN SPECIES 14 PRSS38 (ENSBMSG00010008714) SNAP47 (ENSBMSG00010008703) JMJD4 (ENSBMSG00010008694) ZNF354B (ENSBMSG00010008689) #13 ZFP2 (ENSBMSG00010008682) ZNF454 (ENSBMSG00010008671) #14 GRM6 (ENSBMSG00010008657) #15 ZNF879 (ENSBMSG00010008639) #16 ENSBMSG00010008598 ENSBMSG00010008587 #18 ENSBMSG00010008570 RUFY1 (ENSBMSG00010008550) #19 HNRNPH1 (ENSBMSG00010008502) #20 CBY3 (ENSBMSG00010008469) CANX (ENSBMSG00010008443) #21 MAML1 (ENSBMSG00010008423) #22 LTC4S (ENSBMSG00010008396) #23 MGAT4B (ENSBMSG00010008352) #24 SQSTM1 (ENSBMSG00010008322) #25 MRNIP (ENSBMSG00010008305) TBC1D9B (ENSBMSG00010008220) #26 ENSBMSG00010008160 RNF130 (ENSBMSG00010008132) #27 RASGEF1C (ENSBMSG00010008098) ENSBMSG00010008086 #28 GFPT2 (ENSBMSG00010008079) #29 ENSBMSG00010008071 CNOT6 (ENSBMSG00010008051) #31 ENSBMSG00010008030 #32 FLT4 (ENSBMSG00010007965) #33 ENSBMSG00010007951 Pecora ANCESTRAL SPECIES ENSGT00940000162155 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00390000009510 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Percora_a ANCESTRAL SPECIES ENSGT00940000162155 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00390000009510 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000159358 #33 Bovidae ANCESTRAL SPECIES ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00390000009510 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000008903.g.b.b ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000159358 #33 Caprinae ANCESTRAL SPECIES 32 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00390000009510 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334.a #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000008903.g.b.b ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000159358 #33 Rambouillet Sheep MODERN SPECIES 21 H3-4 (ENSOARG00020016979) H2AC25 (ENSOARG00020016951) HIST3H2BB (ENSOARG00020016921) RNF187 (ENSOARG00020016886) ZFP2 (ENSOARG00020016872) ZNF454 (ENSOARG00020016811) #14 GRM6 (ENSOARG00020016554) #15 ZNF354C (ENSOARG00020016338) #17 ENSOARG00020016295 ADAMTS2 (ENSOARG00020015867) #18 ENSOARG00020015796 ENSOARG00020015427 #19 HNRNPH1 (ENSOARG00020015212) #20 ENSOARG00020015166 CANX (ENSOARG00020014950) #21 MAML1 (ENSOARG00020014863) #22 LTC4S (ENSOARG00020014721) #23 MGAT4B (ENSOARG00020014516) #24 ENSOARG00020014482 SQSTM1 (ENSOARG00020014013) #25 ENSOARG00020013856 ENSOARG00020013782 #26 ENSOARG00020013747 ENSOARG00020013692 RNF130 (ENSOARG00020013456) #27 RASGEF1C (ENSOARG00020013195) MAPK9 (ENSOARG00020011303) #28 GFPT2 (ENSOARG00020010818) #29 ENSOARG00020010644 ENSOARG00020010506 CNOT6 (ENSOARG00020010403) #31 Goat MODERN SPECIES 26 H3-4 (ENSCHIG00000008243) H2AC25 (ENSCHIG00000006649) H2BC26 (ENSCHIG00000009284) RNF187 (ENSCHIG00000012732) ENSCHIG00000025835 ZFP2 (ENSCHIG00000010314) ZNF454 (ENSCHIG00000013008) #14 GRM6 (ENSCHIG00000024892) #15 ZNF879 (ENSCHIG00000020873) #16 ZNF354C (ENSCHIG00000014371) #17 ADAMTS2 (ENSCHIG00000027055) #18 RUFY1 (ENSCHIG00000025380) #19 HNRNPH1 (ENSCHIG00000021285) #20 CBY3 (ENSCHIG00000015238) CANX (ENSCHIG00000000679) #21 MAML1 (ENSCHIG00000024765) #22 LTC4S (ENSCHIG00000026999) #23 MGAT4B (ENSCHIG00000010088) #24 ENSCHIG00000000618 SQSTM1 (ENSCHIG00000022932) #25 MRNIP (ENSCHIG00000017185) TBC1D9B (ENSCHIG00000009249) #26 RNF130 (ENSCHIG00000026077) #27 ENSCHIG00000011545 RASGEF1C (ENSCHIG00000021172) MAPK9 (ENSCHIG00000013958) #28 ENSCHIG00000002362 GFPT2 (ENSCHIG00000025952) #29 ENSCHIG00000024902 CNOT6 (ENSCHIG00000019100) #31 FLT4 (ENSCHIG00000013670) #33 Bovinae ANCESTRAL SPECIES 34 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00390000009510 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000008903.g.b.b ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000159358 #33 Bos ANCESTRAL SPECIES 34 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00390000009510 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000008903.g.b.b ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000159358 #33 Bos_a ANCESTRAL SPECIES 29 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00390000009510 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000008903.g.b.b ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000159358 #33 ENSGT01100000263496.C.c.b.c.b.h.a.b.b Wild yak MODERN SPECIES 562 ENSBMUG00000014775 CANX (ENSBMUG00000014802) #21 MAML1 (ENSBMUG00000014817) #22 LTC4S (ENSBMUG00000014843) #23 MGAT4B (ENSBMUG00000014867) #24 SQSTM1 (ENSBMUG00000014880) #25 MRNIP (ENSBMUG00000014911) ENSBMUG00000014921 #26 ENSBMUG00000014931 #26 RNF130 (ENSBMUG00000014992) #27 Domestic yak MODERN SPECIES 27 ENSBGRG00000003415 H3-4 (ENSBGRG00000003421) H2AC25 (ENSBGRG00000003429) RNF187 (ENSBGRG00000003438) ENSBGRG00000003452 ZNF454 (ENSBGRG00000003460) #14 GRM6 (ENSBGRG00000003481) #15 ZNF354C (ENSBGRG00000003526) #17 ADAMTS2 (ENSBGRG00000003554) #18 ENSBGRG00000003653 ENSBGRG00000003670 RUFY1 (ENSBGRG00000003711) #19 HNRNPH1 (ENSBGRG00000003913) #20 CBY3 (ENSBGRG00000004121) CANX (ENSBGRG00000004174) #21 MAML1 (ENSBGRG00000004268) #22 LTC4S (ENSBGRG00000004319) #23 MGAT4B (ENSBGRG00000004400) #24 SQSTM1 (ENSBGRG00000004587) #25 ENSBGRG00000004761 MRNIP (ENSBGRG00000004791) TBC1D9B (ENSBGRG00000004939) #26 RNF130 (ENSBGRG00000005434) #27 RASGEF1C (ENSBGRG00000005599) MAPK9 (ENSBGRG00000005703) #28 GFPT2 (ENSBGRG00000005946) #29 CNOT6 (ENSBGRG00000006042) #31 FLT4 (ENSBGRG00000006109) #33 ENSBGRG00000006323 ENSBGRG00000004259 ENSBGRG00000004267 Bos_b ANCESTRAL SPECIES 36 ENSGT00940000160371 ENSGT00940000162155 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b ENSGT01100000263474.a.b.b.e.b.a.a ENSGT00390000009510 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000008903.g.b.b ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000159358 #33 ENSGT01100000263496.C.c.b.c.b.h.a.b.b ENSGT00940000154537.o.b.a.b ENSGT00940000154537.o.b.a.a.b.b Hybrid Bos Indicus MODERN SPECIES 26 TRIM11 (ENSBIXG00005029289) TRIM17 (ENSBIXG00005029306) H3-4 (ENSBIXG00005029320) ENSBIXG00005029327 H2AC25 (ENSBIXG00005029330) H2BC26 (ENSBIXG00005029334) RNF187 (ENSBIXG00005029336) ZNF454 (ENSBIXG00005029356) #14 GRM6 (ENSBIXG00005029370) #15 ZNF354C (ENSBIXG00005029390) #17 ADAMTS2 (ENSBIXG00005029444) #18 RUFY1 (ENSBIXG00005029537) #19 HNRNPH1 (ENSBIXG00005029588) #20 ENSBIXG00005029650 CANX (ENSBIXG00005029662) #21 MAML1 (ENSBIXG00005029688) #22 LTC4S (ENSBIXG00005029703) #23 MGAT4B (ENSBIXG00005029717) #24 SQSTM1 (ENSBIXG00005029735) #25 TBC1D9B (ENSBIXG00005029826) #26 RNF130 (ENSBIXG00005029909) #27 RASGEF1C (ENSBIXG00005029974) MAPK9 (ENSBIXG00005030066) #28 GFPT2 (ENSBIXG00005030150) #29 ENSBIXG00005030167 CNOT6 (ENSBIXG00005030187) #31 FLT4 (ENSBIXG00005030226) #33 ENSBIXG00005030277 ENSBIXG00005030287 ENSBIXG00005030304 ENSBIXG00005030312 Cow MODERN SPECIES 26 H2BC26 (ENSBTAG00000053467) RNF187 (ENSBTAG00000019667) ENSBTAG00000052690 ZFP2 (ENSBTAG00000007122) ZNF454 (ENSBTAG00000004262) #14 GRM6 (ENSBTAG00000016187) #15 ENSBTAG00000034973 ZNF879 (ENSBTAG00000038541) #16 ENSBTAG00000055301 ZNF354C (ENSBTAG00000002281) #17 ADAMTS2 (ENSBTAG00000014665) #18 RUFY1 (ENSBTAG00000019868) #19 HNRNPH1 (ENSBTAG00000009389) #20 CBY3 (ENSBTAG00000046663) CANX (ENSBTAG00000048107) #21 MAML1 (ENSBTAG00000050347) #22 LTC4S (ENSBTAG00000009737) #23 MGAT4B (ENSBTAG00000009738) #24 ENSBTAG00000052483 SQSTM1 (ENSBTAG00000015591) #25 MRNIP (ENSBTAG00000015602) TBC1D9B (ENSBTAG00000015611) #26 RNF130 (ENSBTAG00000004856) #27 RASGEF1C (ENSBTAG00000055156) MAPK9 (ENSBTAG00000004709) #28 GFPT2 (ENSBTAG00000002215) #29 CNOT6 (ENSBTAG00000017362) #31 FLT4 (ENSBTAG00000001462) #33 ENSBTAG00000037602 OR5W39 (ENSBTAG00000040610) ENSBTAG00000050327 American bison MODERN SPECIES 3366 ENSBBBG00000012856 H2AC25 (ENSBBBG00000002529) H2BC26 (ENSBBBG00000012861) ENSBBBG00000012877 ENSBBBG00000012896 ZFP2 (ENSBBBG00000012903) ZNF454 (ENSBBBG00000012911) #14 GRM6 (ENSBBBG00000002558) #15 ZNF879 (ENSBBBG00000012952) #16 ZNF354C (ENSBBBG00000012969) #17 ADAMTS2 (ENSBBBG00000013027) #18 RUFY1 (ENSBBBG00000013083) #19 HNRNPH1 (ENSBBBG00000002667) #20 CBY3 (ENSBBBG00000013250) CANX (ENSBBBG00000001618) #21 MAML1 (ENSBBBG00000002705) #22 LTC4S (ENSBBBG00000013326) #23 MGAT4B (ENSBBBG00000001606) #24 ENSBBBG00000002719 SQSTM1 (ENSBBBG00000013370) #25 ENSBBBG00000013424 ENSBBBG00000013442 #26 ENSBBBG00000013465 #26 RNF130 (ENSBBBG00000013530) #27 RASGEF1C (ENSBBBG00000002819) MAPK9 (ENSBBBG00000002942) #28 GFPT2 (ENSBBBG00000013816) #29 Siberian musk deer MODERN SPECIES 37 ENSMMSG00000005088 RUFY1 (ENSMMSG00000015267) #19 ENSMMSG00000015206 #20 ENSMMSG00000015194 CBY3 (ENSMMSG00000015178) CANX (ENSMMSG00000015133) #21 MAML1 (ENSMMSG00000015102) #22 LTC4S (ENSMMSG00000015079) #23 MGAT4B (ENSMMSG00000015039) #24 SQSTM1 (ENSMMSG00000014995) #25 MRNIP (ENSMMSG00000014972) TBC1D9B (ENSMMSG00000014868) #26 RNF130 (ENSMMSG00000014811) #27 ENSMMSG00000014794 RASGEF1C (ENSMMSG00000014739) ENSMMSG00000014721 MAPK9 (ENSMMSG00000014591) #28 GFPT2 (ENSMMSG00000014477) #29 CNOT6 (ENSMMSG00000014444) #31 ADAMTS2 (ENSMMSG00000014340) #18 Yarkand deer MODERN SPECIES 32 ENSCHYG00000009333 ENSCHYG00000009280 ZFP2 (ENSCHYG00000009266) ZNF454 (ENSCHYG00000009231) #14 GRM6 (ENSCHYG00000025499) #15 ZNF879 (ENSCHYG00000025473) #16 ZNF354C (ENSCHYG00000025442) #17 ENSCHYG00000025422 ADAMTS2 (ENSCHYG00000025226) #18 RUFY1 (ENSCHYG00000025163) #19 HNRNPH1 (ENSCHYG00000025070) #20 ENSCHYG00000025060 ENSCHYG00000025054 ENSCHYG00000025001 CANX (ENSCHYG00000024917) #21 MAML1 (ENSCHYG00000024853) #22 LTC4S (ENSCHYG00000024793) #23 MGAT4B (ENSCHYG00000024710) #24 ENSCHYG00000024695 SQSTM1 (ENSCHYG00000024608) #25 MRNIP (ENSCHYG00000024479) TBC1D9B (ENSCHYG00000024054) #26 ENSCHYG00000023803 #27 RASGEF1C (ENSCHYG00000023602) MAPK9 (ENSCHYG00000023318) #28 ENSCHYG00000023280 GFPT2 (ENSCHYG00000023155) #29 CNOT6 (ENSCHYG00000023069) #31 SCGB3A1 (ENSCHYG00000023043) #32 FLT4 (ENSCHYG00000022355) #33 ENSCHYG00000022304 Laurasiatheria_b ANCESTRAL SPECIES 9 ENSGT00940000161487 #9 ENSGT00940000162330 #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000178460 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 Carnivora ANCESTRAL SPECIES 8 ENSGT00940000164840 ENSGT00940000162292 #12 ENSGT00940000162330 #11 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Caniformia ANCESTRAL SPECIES 5 ENSGT00940000164840 ENSGT00940000162292 #12 ENSGT00940000162330 #11 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Caniformia_b ANCESTRAL SPECIES 4 ENSGT00940000164840 ENSGT00940000162292 #12 ENSGT00940000162330 #11 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Ursidae ANCESTRAL SPECIES 16 ENSGT00940000164840 ENSGT00940000162292 #12 ENSGT00940000162330 #11 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 Ursus ANCESTRAL SPECIES 111 ENSGT00940000161487 #9 ENSGT00940000162292 #12 ENSGT00940000162330 #11 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 American black bear MODERN SPECIES 1385 RUFY1 (ENSUAMG00000011441) #19 HNRNPH1 (ENSUAMG00000011445) #20 CBY3 (ENSUAMG00000011449) CANX (ENSUAMG00000011464) #21 ENSUAMG00000012546 MAML1 (ENSUAMG00000012550) #22 MGAT4B (ENSUAMG00000012554) #24 ENSUAMG00000012575 #23 Polar bear MODERN SPECIES 336 ENSUMAG00000023920 CLK4 (ENSUMAG00000023922) #8 ZNF354A (ENSUMAG00000023923) #9 PROP1 (ENSUMAG00000023925) #12 ENSUMAG00000023927 #11 ZNF354B (ENSUMAG00000023928) #13 ZFP2 (ENSUMAG00000023929) ZNF454 (ENSUMAG00000023930) #14 ZNF354C (ENSUMAG00000023932) #17 ZNF879 (ENSUMAG00000023935) #16 ADAMTS2 (ENSUMAG00000023952) #18 RUFY1 (ENSUMAG00000024119) #19 HNRNPH1 (ENSUMAG00000024131) #20 CANX (ENSUMAG00000024212) #21 ENSUMAG00000024214 MAML1 (ENSUMAG00000024215) #22 MGAT4B (ENSUMAG00000024217) #24 ENSUMAG00000024218 #25 ENSUMAG00000024219 TBC1D9B (ENSUMAG00000024277) #26 RNF130 (ENSUMAG00000024538) #27 RASGEF1C (ENSUMAG00000024544) MAPK9 (ENSUMAG00000024571) #28 GFPT2 (ENSUMAG00000024574) #29 CNOT6 (ENSUMAG00000024577) #31 ENSUMAG00000024578 ENSUMAG00000024580 #32 FLT4 (ENSUMAG00000024583) #33 ENSUMAG00000024595 ENSUMAG00000024596 ENSUMAG00000024597 Giant Panda MODERN SPECIES 13 COL23A1 (ENSAMEG00000006381) CLK4 (ENSAMEG00000009109) #8 ZNF354A (ENSAMEG00000009107) #9 ENSAMEG00000020203 PROP1 (ENSAMEG00000030265) #12 ENSAMEG00000023808 #11 ENSAMEG00000023862 #11 ZNF354B (ENSAMEG00000009090) #13 ZNF454 (ENSAMEG00000030594) #14 GRM6 (ENSAMEG00000009029) #15 ZNF354C (ENSAMEG00000009025) #17 ENSAMEG00000008993 #18 HNRNPH1 (ENSAMEG00000008888) #20 CBY3 (ENSAMEG00000026250) CANX (ENSAMEG00000008836) #21 MAML1 (ENSAMEG00000008832) #22 LTC4S (ENSAMEG00000008821) #23 MGAT4B (ENSAMEG00000008776) #24 SQSTM1 (ENSAMEG00000008746) #25 MRNIP (ENSAMEG00000008734) TBC1D9B (ENSAMEG00000008647) #26 RNF130 (ENSAMEG00000008631) #27 RASGEF1C (ENSAMEG00000000806) MAPK9 (ENSAMEG00000000853) #28 GFPT2 (ENSAMEG00000000889) #29 CNOT6 (ENSAMEG00000000949) #31 ENSAMEG00000026585 ENSAMEG00000000972 #32 ENSAMEG00000000974 #33 ENSAMEG00000027505 ENSAMEG00000019809 Mustelinae ANCESTRAL SPECIES 92 ENSGT00940000164840 ENSGT00940000162292 #12 ENSGT00940000162330 #11 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000153503.a.a #20 ENSGT00940000158334 #19 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00900000143807 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.b.b American mink MODERN SPECIES 311 ENSNVIG00000009570 #11 ZNF354B (ENSNVIG00000009575) #13 ZFP2 (ENSNVIG00000009587) ZNF454 (ENSNVIG00000009594) #14 GRM6 (ENSNVIG00000009613) #15 ZNF879 (ENSNVIG00000009657) #16 ZNF354C (ENSNVIG00000009666) #17 ADAMTS2 (ENSNVIG00000009679) #18 ENSNVIG00000009731 RUFY1 (ENSNVIG00000009742) #19 HNRNPH1 (ENSNVIG00000009779) #20 ENSNVIG00000009885 ENSNVIG00000009895 CANX (ENSNVIG00000009897) #21 ENSNVIG00000009926 MAML1 (ENSNVIG00000009929) #22 ENSNVIG00000009938 #23 MGAT4B (ENSNVIG00000009946) #24 SQSTM1 (ENSNVIG00000009967) #25 MRNIP (ENSNVIG00000009983) TBC1D9B (ENSNVIG00000010040) #26 RNF130 (ENSNVIG00000010105) #27 RASGEF1C (ENSNVIG00000010169) MAPK9 (ENSNVIG00000010230) #28 GFPT2 (ENSNVIG00000010374) #29 CNOT6 (ENSNVIG00000010410) #31 ENSNVIG00000010457 ENSNVIG00000010463 #32 FLT4 (ENSNVIG00000010481) #33 ENSNVIG00000010621 ENSNVIG00000010627 Ferret MODERN SPECIES 230 ENSMPUG00000018461 ENSMPUG00000000730 #11 PROP1 (ENSMPUG00000000729) #12 ZNF354B (ENSMPUG00000000728) #13 ZFP2 (ENSMPUG00000018460) ZNF454 (ENSMPUG00000000725) #14 GRM6 (ENSMPUG00000000702) #15 ZNF879 (ENSMPUG00000000701) #16 ZNF354C (ENSMPUG00000000700) #17 ADAMTS2 (ENSMPUG00000000699) #18 ENSMPUG00000000697 HNRNPH1 (ENSMPUG00000000693) #20 RUFY1 (ENSMPUG00000000690) #19 CBY3 (ENSMPUG00000018459) CANX (ENSMPUG00000000686) #21 MAML1 (ENSMPUG00000000684) #22 LTC4S (ENSMPUG00000000668) #23 MGAT4B (ENSMPUG00000000665) #24 SQSTM1 (ENSMPUG00000000653) #25 MRNIP (ENSMPUG00000000636) TBC1D9B (ENSMPUG00000000629) #26 RNF130 (ENSMPUG00000000598) #27 RASGEF1C (ENSMPUG00000000596) MAPK9 (ENSMPUG00000000593) #28 GFPT2 (ENSMPUG00000000590) #29 CNOT6 (ENSMPUG00000000587) #31 SCGB3A1 (ENSMPUG00000000584) #32 FLT4 (ENSMPUG00000000579) #33 ENSMPUG00000000578 ENSMPUG00000000575 ENSMPUG00000000573 Canidae ANCESTRAL SPECIES 9 ENSGT00940000161487 #9 ENSGT00940000162292 #12 ENSGT00940000162330 #11 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000159358 #33 ENSGT00940000153253.b.a.h ENSGT00950000183007.a.b.g.b.a.a.a ENSGT00950000183007.a.b.g.a.b.b.a ENSGT00950000183007.a.b.g.a.a Canis_lupus ANCESTRAL SPECIES 15 ENSGT00390000008029.d ENSGT00940000162292 #12 ENSGT00940000162330 #11 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00950000182802.A.bb ENSGT00940000158978 #31 ENSGT00940000159358 #33 ENSGT00940000153253.b.a.h ENSGT00950000183007.a.b.g.b.a.a.a ENSGT00950000183007.a.b.g.a.b.b.a Dingo MODERN SPECIES 238 ENSCAFG00020003580 PROP1 (ENSCAFG00020003569) #12 ENSCAFG00020003565 #11 ZNF354B (ENSCAFG00020003559) #13 ZFP2 (ENSCAFG00020003554) ZNF454 (ENSCAFG00020003550) #14 GRM6 (ENSCAFG00020003534) #15 ZNF879 (ENSCAFG00020003529) #16 ZNF354C (ENSCAFG00020003521) #17 ADAMTS2 (ENSCAFG00020002876) #18 RUFY1 (ENSCAFG00020002806) #19 HNRNPH1 (ENSCAFG00020002712) #20 CBY3 (ENSCAFG00020002701) CANX (ENSCAFG00020002678) #21 ENSCAFG00020002674 MAML1 (ENSCAFG00020002665) #22 LTC4S (ENSCAFG00020002654) #23 MGAT4B (ENSCAFG00020002640) #24 SQSTM1 (ENSCAFG00020002634) #25 MRNIP (ENSCAFG00020002630) TBC1D9B (ENSCAFG00020002609) #26 RNF130 (ENSCAFG00020002599) #27 RASGEF1C (ENSCAFG00020002586) MAPK9 (ENSCAFG00020002569) #28 GFPT2 (ENSCAFG00020002548) #29 ENSCAFG00020002544 ENSCAFG00020002541 CNOT6 (ENSCAFG00020002441) #31 FLT4 (ENSCAFG00020002415) #33 ENSCAFG00020002411 ENSCAFG00020002403 Dog MODERN SPECIES 2 CLK4 (ENSCAFG00845009410) #8 ENSCAFG00845009369 ZNF354A (ENSCAFG00845009328) #9 PROP1 (ENSCAFG00845009295) #12 OR1AD1 (ENSCAFG00845009275) #11 ZNF354B (ENSCAFG00845009251) #13 ZFP2 (ENSCAFG00845009219) ZNF454 (ENSCAFG00845009113) #14 GRM6 (ENSCAFG00845009049) #15 ZNF879 (ENSCAFG00845008945) #16 ADAMTS2 (ENSCAFG00845008674) #18 RUFY1 (ENSCAFG00845008457) #19 HNRNPH1 (ENSCAFG00845008269) #20 ENSCAFG00845008156 CANX (ENSCAFG00845008030) #21 MAML1 (ENSCAFG00845007951) #22 LTC4S (ENSCAFG00845007863) #23 MGAT4B (ENSCAFG00845007711) #24 SQSTM1 (ENSCAFG00845007599) #25 ENSCAFG00845007488 TBC1D9B (ENSCAFG00845007248) #26 RNF130 (ENSCAFG00845007023) #27 RASGEF1C (ENSCAFG00845006880) MAPK9 (ENSCAFG00845006710) #28 GFPT2 (ENSCAFG00845006488) #29 ENSCAFG00845006420 CNOT6 (ENSCAFG00845006394) #31 ENSCAFG00845006015 #33 ENSCAFG00845005841 ENSCAFG00845005821 ENSCAFG00845005800 Red fox MODERN SPECIES 111 ZNF354A (ENSVVUG00000001168) #9 ENSVVUG00000001199 PROP1 (ENSVVUG00000001216) #12 ENSVVUG00000001223 #11 ZNF354B (ENSVVUG00000001230) #13 ZFP2 (ENSVVUG00000001258) ZNF454 (ENSVVUG00000001267) #14 GRM6 (ENSVVUG00000001275) #15 ZNF879 (ENSVVUG00000001298) #16 ZNF354C (ENSVVUG00000001301) #17 ADAMTS2 (ENSVVUG00000001350) #18 RUFY1 (ENSVVUG00000001379) #19 HNRNPH1 (ENSVVUG00000001397) #20 ENSVVUG00000001423 CANX (ENSVVUG00000001443) #21 MAML1 (ENSVVUG00000001479) #22 LTC4S (ENSVVUG00000001534) #23 MGAT4B (ENSVVUG00000001609) #24 SQSTM1 (ENSVVUG00000001644) #25 MRNIP (ENSVVUG00000001675) TBC1D9B (ENSVVUG00000001699) #26 RNF130 (ENSVVUG00000001731) #27 Felidae ANCESTRAL SPECIES 6 ENSGT00940000164840 ENSGT00940000162292 #12 ENSGT00940000162330.q #11 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.a Panthera ANCESTRAL SPECIES 6 ENSGT00940000162292 #12 ENSGT00940000162330.r #11 ENSGT00940000162330.q #11 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.a Tiger MODERN SPECIES 179 COL23A1 (ENSPTIG00000021709) CLK4 (ENSPTIG00000021658) #8 ZNF354A (ENSPTIG00000021645) #9 PROP1 (ENSPTIG00000021642) #12 ENSPTIG00000008066 #11 ENSPTIG00000008063 #11 ZNF354B (ENSPTIG00000021623) #13 ZFP2 (ENSPTIG00000008055) ZNF454 (ENSPTIG00000021618) #14 GRM6 (ENSPTIG00000021610) #15 ZNF879 (ENSPTIG00000021605) #16 ADAMTS2 (ENSPTIG00000021593) #18 RUFY1 (ENSPTIG00000021574) #19 HNRNPH1 (ENSPTIG00000021552) #20 CANX (ENSPTIG00000021509) #21 MAML1 (ENSPTIG00000021443) #22 LTC4S (ENSPTIG00000021436) #23 MGAT4B (ENSPTIG00000021423) #24 SQSTM1 (ENSPTIG00000021366) #25 ENSPTIG00000021321 TBC1D9B (ENSPTIG00000021280) #26 RNF130 (ENSPTIG00000021267) #27 RASGEF1C (ENSPTIG00000021261) MAPK9 (ENSPTIG00000021236) #28 GFPT2 (ENSPTIG00000016814) #29 CNOT6 (ENSPTIG00000016794) #31 SCGB3A1 (ENSPTIG00000016785) #32 FLT4 (ENSPTIG00000016679) #33 ENSPTIG00000016668 ENSPTIG00000016635 TRIM52 (ENSPTIG00000016620) Panthera_a ANCESTRAL SPECIES 3 ENSGT00940000162292 #12 ENSGT00940000162330.r #11 ENSGT00940000162330.q #11 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT01030000236091 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00950000186148 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00950000183007.a.b.g.a.b.b.a leopard MODERN SPECIES 56 ZNF354A (ENSPPRG00000011698) #9 PROP1 (ENSPPRG00000011246) #12 ENSPPRG00000011161 #11 ENSPPRG00000016090 #11 ZNF354B (ENSPPRG00000011009) #13 ZFP2 (ENSPPRG00000016081) ZNF454 (ENSPPRG00000010811) #14 GRM6 (ENSPPRG00000010413) #15 ZNF879 (ENSPPRG00000010083) #16 ZNF354C (ENSPPRG00000009858) #17 ADAMTS2 (ENSPPRG00000009123) #18 RUFY1 (ENSPPRG00000008370) #19 HNRNPH1 (ENSPPRG00000008228) #20 CBY3 (ENSPPRG00000007762) CANX (ENSPPRG00000007744) #21 MAML1 (ENSPPRG00000007494) #22 LTC4S (ENSPPRG00000007076) #23 MGAT4B (ENSPPRG00000006074) #24 SQSTM1 (ENSPPRG00000005098) #25 ENSPPRG00000004317 TBC1D9B (ENSPPRG00000003447) #26 RNF130 (ENSPPRG00000002048) #27 RASGEF1C (ENSPPRG00000001768) MAPK9 (ENSPPRG00000018998) #28 GFPT2 (ENSPPRG00000012407) #29 CNOT6 (ENSPPRG00000011912) #31 FLT4 (ENSPPRG00000010423) #33 ENSPPRG00000015233 V1R (ENSPPRG00000015217) lion MODERN SPECIES LEAP2 (ENSPLOG00000001435) UQCRQ (ENSPLOG00000001445) GDF9 (ENSPLOG00000001462) SHROOM1 (ENSPLOG00000001489) SOWAHA (ENSPLOG00000001548) SEPTIN8 (ENSPLOG00000001577) KIF3A (ENSPLOG00000001619) ENSPLOG00000001651 IL13 (ENSPLOG00000001662) ENSPLOG00000001678 RUFY1 (ENSPLOG00000001700) #19 HNRNPH1 (ENSPLOG00000001746) #20 ENSPLOG00000001782 CANX (ENSPLOG00000001792) #21 ENSPLOG00000001813 MAML1 (ENSPLOG00000001822) #22 LTC4S (ENSPLOG00000001837) #23 MGAT4B (ENSPLOG00000001865) #24 SQSTM1 (ENSPLOG00000001888) #25 ENSPLOG00000001922 ENSPLOG00000001926 TBC1D9B (ENSPLOG00000001968) #26 RNF130 (ENSPLOG00000002028) #27 RASGEF1C (ENSPLOG00000002080) MAPK9 (ENSPLOG00000002198) #28 GFPT2 (ENSPLOG00000002417) #29 CNOT6 (ENSPLOG00000002444) #31 ENSPLOG00000002463 #32 FLT4 (ENSPLOG00000002503) #33 ENSPLOG00000002578 ENSPLOG00000002591 Cat MODERN SPECIES COL23A1 (ENSFCAG00000045286) CLK4 (ENSFCAG00000030349) #8 ZNF354A (ENSFCAG00000043514) #9 ENSFCAG00000028668 PROP1 (ENSFCAG00000044834) #12 ENSFCAG00000022525 #11 ZNF354B (ENSFCAG00000040729) #13 ZNF454 (ENSFCAG00000021971) #14 GRM6 (ENSFCAG00000009682) #15 ZNF354C (ENSFCAG00000038284) #17 ADAMTS2 (ENSFCAG00000019013) #18 RUFY1 (ENSFCAG00000001202) #19 HNRNPH1 (ENSFCAG00000001204) #20 ENSFCAG00000004846 CANX (ENSFCAG00000022987) #21 MAML1 (ENSFCAG00000014693) #22 LTC4S (ENSFCAG00000019371) #23 MGAT4B (ENSFCAG00000014697) #24 SQSTM1 (ENSFCAG00000014700) #25 MRNIP (ENSFCAG00000014705) TBC1D9B (ENSFCAG00000014707) #26 RASGEF1C (ENSFCAG00000004472) MAPK9 (ENSFCAG00000025302) #28 GFPT2 (ENSFCAG00000004474) #29 CNOT6 (ENSFCAG00000001881) #31 SCGB3A1 (ENSFCAG00000041360) #32 FLT4 (ENSFCAG00000001882) #33 ENSFCAG00000027798 ENSFCAG00000049328 ENSFCAG00000025694 FELCATV1R2 (ENSFCAG00000031101) Laurasiatheria_c ANCESTRAL SPECIES 7 ENSGT00940000162238 ENSGT00940000160245 #8 ENSGT00940000161487 #9 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00530000063632.B Equus ANCESTRAL SPECIES 6 ENSGT00940000160245 #8 ENSGT00940000161487 #9 ENSGT00940000162330.t #11 ENSGT00940000162292 #12 ENSGT00940000162570 #13 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978.e #31 ENSGT00940000159358 #33 ENSGT00940000163029.b ENSGT00530000063632.B ENSGT00940000162750 ENSGT00940000160338 Horse MODERN SPECIES 5 COL23A1 (ENSECAG00000041924) CLK4 (ENSECAG00000014153) #8 ZNF354A (ENSECAG00000012431) #9 PROP1 (ENSECAG00000012415) #12 ZNF354B (ENSECAG00000012028) #13 ZFP2 (ENSECAG00000005156) ZNF454 (ENSECAG00000056685) #14 GRM6 (ENSECAG00000023504) #15 ZNF879 (ENSECAG00000053026) #16 ZNF354C (ENSECAG00000023446) #17 ADAMTS2 (ENSECAG00000016328) #18 RUFY1 (ENSECAG00000023719) #19 HNRNPH1 (ENSECAG00000014429) #20 CBY3 (ENSECAG00000056430) CANX (ENSECAG00000003079) #21 MAML1 (ENSECAG00000024706) #22 LTC4S (ENSECAG00000020644) #23 MGAT4B (ENSECAG00000010844) #24 SQSTM1 (ENSECAG00000020929) #25 MRNIP (ENSECAG00000020524) TBC1D9B (ENSECAG00000017830) #26 RNF130 (ENSECAG00000007222) #27 RASGEF1C (ENSECAG00000015254) ENSECAG00000059110 MAPK9 (ENSECAG00000021489) #28 GFPT2 (ENSECAG00000009303) #29 CNOT6 (ENSECAG00000019325) #31 FLT4 (ENSECAG00000017108) #33 ENSECAG00000047525 ENSECAG00000045902 ENSECAG00000046956 Donkey MODERN SPECIES 29 ZNF354A (ENSEASG00005030309) #9 ENSEASG00005007169 #12 ENSEASG00005007167 #11 ZNF354B (ENSEASG00005037407) #13 ZFP2 (ENSEASG00005012614) ZNF454 (ENSEASG00005012616) #14 GRM6 (ENSEASG00005012619) #15 ZNF879 (ENSEASG00005026494) #16 ZNF354C (ENSEASG00005012627) #17 ADAMTS2 (ENSEASG00005012630) #18 RUFY1 (ENSEASG00005012637) #19 ENSEASG00005031517 HNRNPH1 (ENSEASG00005012642) #20 CBY3 (ENSEASG00005012647) CANX (ENSEASG00005012649) #21 MAML1 (ENSEASG00005012652) #22 ENSEASG00005012654 #23 MGAT4B (ENSEASG00005012655) #24 SQSTM1 (ENSEASG00005012658) #25 ENSEASG00005012662 TBC1D9B (ENSEASG00005028853) #26 RNF130 (ENSEASG00005012726) #27 RASGEF1C (ENSEASG00005012753) MAPK9 (ENSEASG00005012786) #28 GFPT2 (ENSEASG00005012790) #29 ENSEASG00005012794 #31 FLT4 (ENSEASG00005012804) #33 ENSEASG00005012833 MGAT1 (ENSEASG00005035153) ZFP62 (ENSEASG00005012840) BTNL9 (ENSEASG00005031036) Chiroptera ANCESTRAL SPECIES 1 ENSGT00940000162570 #13 ENSGT00940000162851 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00530000063632.B Microchiroptera ANCESTRAL SPECIES 3 ENSGT00940000162851 ENSGT00940000162743 ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000178333 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00530000063632.B Microbat MODERN SPECIES 1353 RUFY1 (ENSMLUG00000016610) #19 ENSMLUG00000016625 #20 CANX (ENSMLUG00000013027) #21 MAML1 (ENSMLUG00000008087) #22 ENSMLUG00000030145 #23 MGAT4B (ENSMLUG00000006819) #24 SQSTM1 (ENSMLUG00000001250) #25 ENSMLUG00000001257 RNF130 (ENSMLUG00000023943) #27 MAPK9 (ENSMLUG00000005924) #28 GFPT2 (ENSMLUG00000013606) #29 CNOT6 (ENSMLUG00000010257) #31 Greater horseshoe bat MODERN SPECIES 16 ENSRFEG00010020667 #9 ZFP2 (ENSRFEG00010020696) ZNF454 (ENSRFEG00010020708) #14 GRM6 (ENSRFEG00010020725) #15 ZNF879 (ENSRFEG00010020752) #16 ZNF354C (ENSRFEG00010020767) #17 ADAMTS2 (ENSRFEG00010020822) #18 ENSRFEG00010020942 ENSRFEG00010020957 RUFY1 (ENSRFEG00010020977) #19 HNRNPH1 (ENSRFEG00010021042) #20 ENSRFEG00010021085 ENSRFEG00010021101 ENSRFEG00010021107 CANX (ENSRFEG00010021119) #21 MAML1 (ENSRFEG00010021142) #22 LTC4S (ENSRFEG00010021169) #23 MGAT4B (ENSRFEG00010021202) #24 SQSTM1 (ENSRFEG00010021248) #25 ENSRFEG00010021266 TBC1D9B (ENSRFEG00010021286) #26 ENSRFEG00010021331 RNF130 (ENSRFEG00010021349) #27 RASGEF1C (ENSRFEG00010021365) MAPK9 (ENSRFEG00010021397) #28 GFPT2 (ENSRFEG00010021436) #29 ENSRFEG00010021453 CNOT6 (ENSRFEG00010021460) #31 SCGB3A1 (ENSRFEG00010021477) #32 FLT4 (ENSRFEG00010021493) #33 ENSRFEG00010021535 Megabat MODERN SPECIES 389 CANX (ENSPVAG00000015489) #21 MAML1 (ENSPVAG00000015490) #22 ENSPVAG00000015492 MGAT4B (ENSPVAG00000015497) #24 SQSTM1 (ENSPVAG00000015501) #25 MRNIP (ENSPVAG00000015503) TBC1D9B (ENSPVAG00000015506) #26 RNF130 (ENSPVAG00000015510) #27 Atlantogenata ANCESTRAL SPECIES ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000163611 ENSGT00940000162750 ENSGT00530000063632.B ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 ENSGT00940000163029 ENSGT00940000162292 #12 ENSGT00940000162330 #11 Afrotheria ANCESTRAL SPECIES 123 ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT00940000162181 #14 ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Afrotheria_a ANCESTRAL SPECIES 127 ENSGT01090000260018.D.d.b ENSGT01090000260018.D.d.a ENSGT01090000260018.A.a.b ENSGT01090000259995.b.a.a.b ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT01030000234648.a.b.a.b #15 ENSGT00940000162816 #16 ENSGT00940000162715 #17 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.a.a.a #20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00420000029848.A #32 ENSGT00940000159358 #33 Elephant MODERN SPECIES 2 ENSLAFG00000030931 ENSLAFG00000028643 ENSLAFG00000029553 ENSLAFG00000028767 BTNL9 (ENSLAFG00000010886) ZFP62 (ENSLAFG00000010486) MGAT1 (ENSLAFG00000009734) GRM6 (ENSLAFG00000022818) #15 ZNF879 (ENSLAFG00000018662) #16 ZNF354C (ENSLAFG00000006476) #17 ADAMTS2 (ENSLAFG00000006120) #18 RUFY1 (ENSLAFG00000015754) #19 ENSLAFG00000015766 #20 ENSLAFG00000001132 CANX (ENSLAFG00000000512) #21 MAML1 (ENSLAFG00000000515) #22 LTC4S (ENSLAFG00000020490) #23 ENSLAFG00000017123 #24 MGAT4B (ENSLAFG00000030911) #24 SQSTM1 (ENSLAFG00000028515) #25 MRNIP (ENSLAFG00000028457) TBC1D9B (ENSLAFG00000018254) #26 RNF130 (ENSLAFG00000008735) #27 RASGEF1C (ENSLAFG00000002749) MAPK9 (ENSLAFG00000014532) #28 GFPT2 (ENSLAFG00000007391) #29 CNOT6 (ENSLAFG00000016742) #31 ENSLAFG00000009953 #32 FLT4 (ENSLAFG00000008776) #33 ENSLAFG00000031837 ENSLAFG00000031942 Hyrax MODERN SPECIES 2005 CANX (ENSPCAG00000004473) #21 MAML1 (ENSPCAG00000004553) #22 Tenrec MODERN SPECIES 16434 CANX (ENSETEG00000010509) #21 MAML1 (ENSETEG00000010506) #22 Xenarthra ANCESTRAL SPECIES 1090 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 Armadillo MODERN SPECIES 2373 CBY3 (ENSDNOG00000032017) CANX (ENSDNOG00000009892) #21 MAML1 (ENSDNOG00000009919) #22 LTC4S (ENSDNOG00000037622) #23 MGAT4B (ENSDNOG00000037025) #24 Marsupialia ANCESTRAL SPECIES 9 ENSGT00940000155266.x ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b ENSGT00940000158764 ENSGT00940000155448 ENSGT00940000159708 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00940000158554 #26 ENSGT00940000157465.a #27 ENSGT00940000159358 #33 ENSGT00420000029848.A #32 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000161005 ENSGT00940000160245 #8 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 Marsupialia_b ANCESTRAL SPECIES 5 ENSGT00940000157601 ENSGT00940000154663 ENSGT00940000155266.x ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b ENSGT00940000158764 ENSGT00940000155448 ENSGT00940000159708 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00940000158554 #26 ENSGT00940000157465.a #27 ENSGT00940000159358 #33 ENSGT00420000029848.A #32 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000161005 ENSGT00940000160245 #8 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 Diprotodontia ANCESTRAL SPECIES 4 ENSGT00390000001804 ENSGT00940000157601.x.a ENSGT00940000155266.x ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b ENSGT00940000158764 ENSGT00940000155448 ENSGT00940000159708 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00940000158554 #26 ENSGT00940000157465.a #27 ENSGT00940000159358 #33 ENSGT00420000029848.A #32 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000161005 ENSGT00940000160245 #8 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 Wallaby MODERN SPECIES 6536 MAML1 (ENSMEUG00000005948) #22 LTC4S (ENSMEUG00000005965) #23 MGAT4B (ENSMEUG00000005974) #24 Diprotodontia_a ANCESTRAL SPECIES 5 ENSGT00940000157601.x.b ENSGT00940000154663 ENSGT00940000155266.x ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b ENSGT00940000158764 ENSGT00940000155448 ENSGT00940000159708 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00940000158554 #26 ENSGT00940000157465.a #27 ENSGT00940000159358 #33 ENSGT00420000029848.A #32 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000161005 ENSGT00940000160245 #8 ENSGT00940000162238 ENSGT00940000159222 ENSGT00940000154735 Common wonbat MODERN SPECIES 1023 EIF2S2 (ENSVURG00010019246) ENSVURG00010019251 CHMP4B (ENSVURG00010019263) ENSVURG00010019269 ZNF341 (ENSVURG00010019277) PXMP4 (ENSVURG00010019297) E2F1 (ENSVURG00010019304) NECAB3 (ENSVURG00010019324) ACTL10 (ENSVURG00010019341) CBFA2T2 (ENSVURG00010019347) SNTA1 (ENSVURG00010019377) TOX2 (ENSVURG00010019590) SRSF6 (ENSVURG00010019601) L3MBTL1 (ENSVURG00010019617) CANX (ENSVURG00010019632) #21 MAML1 (ENSVURG00010019659) #22 SQSTM1 (ENSVURG00010019670) #25 TBC1D9B (ENSVURG00010019683) #26 RNF130 (ENSVURG00010019705) #27 FLT4 (ENSVURG00010019743) #33 ENSVURG00010019769 #32 MAPK9 (ENSVURG00010019784) #28 GFPT2 (ENSVURG00010019801) #29 CNOT6 (ENSVURG00010019814) #31 RASGEF1C (ENSVURG00010019833) CLK4 (ENSVURG00010019863) #8 ENSVURG00010019893 PHYKPL (ENSVURG00010019924) HNRNPAB (ENSVURG00010000096) NHP2 (ENSVURG00010000133) ENSVURG00010000153 koala MODERN SPECIES 74 ENSPCIG00000011153 CHMP4B (ENSPCIG00000005848) ENSPCIG00000005849 ZNF341 (ENSPCIG00000005844) PXMP4 (ENSPCIG00000005843) E2F1 (ENSPCIG00000005835) NECAB3 (ENSPCIG00000005831) ENSPCIG00000005833 ENSPCIG00000005830 SNTA1 (ENSPCIG00000005829) TOX2 (ENSPCIG00000005825) SRSF6 (ENSPCIG00000003820) L3MBTL1 (ENSPCIG00000003824) ENSPCIG00000033556 CANX (ENSPCIG00000003888) #21 MAML1 (ENSPCIG00000003902) #22 ENSPCIG00000003908 #23 MGAT4B (ENSPCIG00000003915) #24 SQSTM1 (ENSPCIG00000003936) #25 TBC1D9B (ENSPCIG00000003952) #26 ENSPCIG00000003992 #27 FLT4 (ENSPCIG00000004027) #33 ENSPCIG00000004056 #32 MAPK9 (ENSPCIG00000004062) #28 GFPT2 (ENSPCIG00000004080) #29 CNOT6 (ENSPCIG00000020319) #31 RASGEF1C (ENSPCIG00000018198) CLK4 (ENSPCIG00000018201) #8 COL23A1 (ENSPCIG00000037047) PHYKPL (ENSPCIG00000002747) HNRNPAB (ENSPCIG00000002735) Tasmanian devil MODERN SPECIES 1 EIF2S2 (ENSSHAG00000029026) ENSSHAG00000022710 ENSSHAG00000026098 ENSSHAG00000022664 ZNF341 (ENSSHAG00000022447) PXMP4 (ENSSHAG00000029249) ENSSHAG00000023415 E2F1 (ENSSHAG00000029215) ENSSHAG00000023391 ENSSHAG00000024966 ENSSHAG00000015173 ENSSHAG00000013874 ENSSHAG00000012805 ENSSHAG00000028809 ENSSHAG00000011510 #21 MAML1 (ENSSHAG00000011151) #22 LTC4S (ENSSHAG00000025649) #23 MGAT4B (ENSSHAG00000010968) #24 SQSTM1 (ENSSHAG00000025384) #25 ENSSHAG00000009809 #26 ENSSHAG00000008447 #27 ENSSHAG00000007344 #33 ENSSHAG00000006299 #32 MAPK9 (ENSSHAG00000005542) #28 ENSSHAG00000004019 #29 ENSSHAG00000017436 #31 ENSSHAG00000016960 #8 COL23A1 (ENSSHAG00000015949) PHYKPL (ENSSHAG00000015838) ENSSHAG00000015802 NHP2 (ENSSHAG00000015581) Opossum MODERN SPECIES CHMP4B (ENSMODG00000002830) ZNF341 (ENSMODG00000002856) PXMP4 (ENSMODG00000002864) E2F1 (ENSMODG00000002875) ENSMODG00000002988 ENSMODG00000002993 NECAB3 (ENSMODG00000002977) CBFA2T2 (ENSMODG00000003023) SNTA1 (ENSMODG00000003050) TOX2 (ENSMODG00000003070) ENSMODG00000023076 SRSF6 (ENSMODG00000003107) L3MBTL1 (ENSMODG00000003647) ENSMODG00000003673 ENSMODG00000003708 #21 MAML1 (ENSMODG00000003725) #22 LTC4S (ENSMODG00000003733) #23 MGAT4B (ENSMODG00000003778) #24 SQSTM1 (ENSMODG00000003806) #25 TBC1D9B (ENSMODG00000003882) #26 ENSMODG00000003904 #27 FLT4 (ENSMODG00000003918) #33 ENSMODG00000003922 #32 MAPK9 (ENSMODG00000003946) #28 GFPT2 (ENSMODG00000003969) #29 CNOT6 (ENSMODG00000003979) #31 RASGEF1C (ENSMODG00000004052) CLK4 (ENSMODG00000004119) #8 COL23A1 (ENSMODG00000004172) HNRNPAB (ENSMODG00000004217) NHP2 (ENSMODG00000004231) Platypus MODERN SPECIES 85 RMND5B (ENSOANG00000043497) NHP2 (ENSOANG00000001204) HNRNPAB (ENSOANG00000004998) PHYKPL (ENSOANG00000004999) COL23A1 (ENSOANG00000005000) CLK4 (ENSOANG00000010230) #8 RASGEF1C (ENSOANG00000010229) MAPK9 (ENSOANG00000010228) #28 GFPT2 (ENSOANG00000010227) #29 CNOT6 (ENSOANG00000010226) #31 ADAMTS2 (ENSOANG00000010225) #18 ENSOANG00000010223 #19 ENSOANG00000010222 ##20 ENSOANG00000010221 CANX (ENSOANG00000013590) #21 MAML1 (ENSOANG00000013589) #22 LTC4S (ENSOANG00000045177) #23 MGAT4B (ENSOANG00000013588) #24 SQSTM1 (ENSOANG00000014851) #25 ENSOANG00000039463 ENSOANG00000036131 ALAS1 (ENSOANG00000014853) POC1A (ENSOANG00000014854) DUSP7 (ENSOANG00000048154) ACY1 (ENSOANG00000001327) ABHD14A (ENSOANG00000037506) ABHD14B (ENSOANG00000037228) TEX264 (ENSOANG00000040502) RAD54L2 (ENSOANG00000012793) DCAF1 (ENSOANG00000012792) ENSOANG00000001071 Sauria ANCESTRAL SPECIES 17 ENSGT00940000159308 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00990000206303 ENSGT00390000017909 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000153137.a.b.a ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.h #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b Archelosauria ANCESTRAL SPECIES 15 ENSGT00940000159308 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00990000206303 ENSGT00390000017909 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000153137.a.b.a ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000155150.b.b Archosauria ANCESTRAL SPECIES 17 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00990000206303 ENSGT00390000017909 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000153137.a.b.a ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000155150.b.b Aves ANCESTRAL SPECIES 15 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000153137.a.b.a ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000155150.b.b Neognathae ANCESTRAL SPECIES 14 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00390000017909 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000155150.b.b Neognathae_b ANCESTRAL SPECIES 16 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00390000017909 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000155150.b.b Neognathae_c ANCESTRAL SPECIES 19 ENSGT00940000157840 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000155150.b.b Golden eagle MODERN SPECIES 14 WNT8A (ENSACCG00020015786) NME5 (ENSACCG00020015776) HNRNPAB (ENSACCG00020015761) PHYKPL (ENSACCG00020015749) CLK4 (ENSACCG00020015732) #8 RASGEF1C (ENSACCG00020015714) MAPK9 (ENSACCG00020015665) #28 GFPT2 (ENSACCG00020015570) #29 CNOT6 (ENSACCG00020015512) #31 ADAMTS2 (ENSACCG00020015422) #18 RUFY1 (ENSACCG00020015254) #19 ENSACCG00020015222 ENSACCG00020015174 ##20 ENSACCG00020015121 #23 CANX (ENSACCG00020015110) #21 MAML1 (ENSACCG00020015085) #22 ENSACCG00020015072 #23 MGAT4B (ENSACCG00020015055) #24 SQSTM1 (ENSACCG00020015027) #25 TBC1D9B (ENSACCG00020014941) #26 RNF130 (ENSACCG00020014886) #27 FLT4 (ENSACCG00020014606) #33 ENSACCG00020014402 ENSACCG00020014389 HMGXB3 (ENSACCG00020014338) CSF1R (ENSACCG00020014270) PDGFRB (ENSACCG00020014132) ENSACCG00020014034 SLC6A7 (ENSACCG00020014014) ENSACCG00020013979 ARSI (ENSACCG00020013936) Kakapo MODERN SPECIES 6 WNT8A (ENSSHBG00005008010) NME5 (ENSSHBG00005008026) HNRNPAB (ENSSHBG00005008039) PHYKPL (ENSSHBG00005008050) CLK4 (ENSSHBG00005008068) #8 RASGEF1C (ENSSHBG00005008091) MAPK9 (ENSSHBG00005008107) #28 GFPT2 (ENSSHBG00005008139) #29 CNOT6 (ENSSHBG00005008176) #31 ADAMTS2 (ENSSHBG00005008223) #18 RUFY1 (ENSSHBG00005008332) #19 ENSSHBG00005008360 ##20 ENSSHBG00005008382 ENSSHBG00005008385 #23 CANX (ENSSHBG00005008393) #21 MAML1 (ENSSHBG00005008399) #22 ENSSHBG00005008408 #23 MGAT4B (ENSSHBG00005008420) #24 SQSTM1 (ENSSHBG00005008441) #25 ENSSHBG00005008459 TBC1D9B (ENSSHBG00005008481) #26 RNF130 (ENSSHBG00005008494) #27 FLT4 (ENSSHBG00005008539) #33 ENSSHBG00005008652 ENSSHBG00005000759 ENSSHBG00005005364 HMGXB3 (ENSSHBG00005005462) CSF1R (ENSSHBG00005005702) ENSSHBG00005005995 ENSSHBG00005006031 ENSSHBG00005006039 Passeriformes ANCESTRAL SPECIES 14 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00390000017909 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b Great tit MODERN SPECIES 4 NME5 (ENSPMJG00000008733) PHYKPL (ENSPMJG00000008732) HNRNPAB (ENSPMJG00000008731) CLK4 (ENSPMJG00000008727) #8 RASGEF1C (ENSPMJG00000008725) MAPK9 (ENSPMJG00000008720) #28 GFPT2 (ENSPMJG00000008717) #29 CNOT6 (ENSPMJG00000008709) #31 ENSPMJG00000008708 ADAMTS2 (ENSPMJG00000008215) #18 RUFY1 (ENSPMJG00000008200) #19 ENSPMJG00000008198 ##20 ENSPMJG00000008197 ENSPMJG00000008196 #23 CANX (ENSPMJG00000008194) #21 MAML1 (ENSPMJG00000008193) #22 ENSPMJG00000008192 #23 MGAT4B (ENSPMJG00000008191) #24 SQSTM1 (ENSPMJG00000008190) #25 ENSPMJG00000008189 TBC1D9B (ENSPMJG00000008188) #26 RNF130 (ENSPMJG00000008163) #27 FLT4 (ENSPMJG00000008144) #33 ENSPMJG00000008142 ENSPMJG00000008140 HMGXB3 (ENSPMJG00000008137) CSF1R (ENSPMJG00000008134) PDGFRB (ENSPMJG00000008128) ENSPMJG00000008125 SLC6A7 (ENSPMJG00000008124) ENSPMJG00000008123 Passeriformes_d ANCESTRAL SPECIES 15 ENSGT00940000157840 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000155150.b.b Flycatcher MODERN SPECIES 4 NME5 (ENSFALG00000007651) PHYKPL (ENSFALG00000007658) ENSFALG00000007654 ENSFALG00000007671 ENSFALG00000007682 #8 RASGEF1C (ENSFALG00000007687) MAPK9 (ENSFALG00000007690) #28 GFPT2 (ENSFALG00000007695) #29 CNOT6 (ENSFALG00000029051) #31 ADAMTS2 (ENSFALG00000007706) #18 RUFY1 (ENSFALG00000007724) #19 ENSFALG00000007747 ##20 ENSFALG00000007761 ENSFALG00000007764 #23 CANX (ENSFALG00000007769) #21 MAML1 (ENSFALG00000025517) #22 ENSFALG00000007777 #23 MGAT4B (ENSFALG00000007786) #24 SQSTM1 (ENSFALG00000023497) #25 ENSFALG00000028425 TBC1D9B (ENSFALG00000007812) #26 RNF130 (ENSFALG00000007816) #27 ENSFALG00000007835 #33 ENSFALG00000007870 ENSFALG00000014366 HMGXB3 (ENSFALG00000007879) CSF1R (ENSFALG00000007905) PDGFRB (ENSFALG00000007939) ENSFALG00000007944 SLC6A7 (ENSFALG00000007961) ENSFALG00000007989 Passeriformes_g ANCESTRAL SPECIES 15 ENSGT00940000157840 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000155150.b.b Medium ground finch MODERN SPECIES 11 WNT8A (ENSGFOG00000003821) NME5 (ENSGFOG00000003839) HNRNPAB (ENSGFOG00000003855) PHYKPL (ENSGFOG00000003891) CLK4 (ENSGFOG00000003915) #8 RASGEF1C (ENSGFOG00000003937) MAPK9 (ENSGFOG00000003958) #28 GFPT2 (ENSGFOG00000003990) #29 CNOT6 (ENSGFOG00000004035) #31 ADAMTS2 (ENSGFOG00000004096) #18 RUFY1 (ENSGFOG00000005270) #19 ENSGFOG00000005296 ##20 ENSGFOG00000005339 ENSGFOG00000005388 #23 CANX (ENSGFOG00000000010) #21 MAML1 (ENSGFOG00000000012) #22 ENSGFOG00000000013 #23 MGAT4B (ENSGFOG00000000014) #24 SQSTM1 (ENSGFOG00000000015) #25 ENSGFOG00000000016 TBC1D9B (ENSGFOG00000000023) #26 RNF130 (ENSGFOG00000000027) #27 FLT4 (ENSGFOG00000000045) #33 ENSGFOG00000000100 ENSGFOG00000000101 HMGXB3 (ENSGFOG00000000106) CSF1R (ENSGFOG00000000114) PDGFRB (ENSGFOG00000000122) ENSGFOG00000000127 SLC6A7 (ENSGFOG00000000134) ENSGFOG00000000162 Passeroidea ANCESTRAL SPECIES 15 ENSGT00940000157840 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000155150.b.b Zebra finch MODERN SPECIES 4 WNT8A (ENSTGUG00000001171) NME5 (ENSTGUG00000001170) HNRNPAB (ENSTGUG00000028392) PHYKPL (ENSTGUG00000001162) CLK4 (ENSTGUG00000001155) #8 RASGEF1C (ENSTGUG00000001150) MAPK9 (ENSTGUG00000023050) #28 GFPT2 (ENSTGUG00000001128) #29 CNOT6 (ENSTGUG00000001119) #31 ADAMTS2 (ENSTGUG00000001108) #18 RUFY1 (ENSTGUG00000001097) #19 ENSTGUG00000001085 ##20 ENSTGUG00000001082 ENSTGUG00000001074 #23 CANX (ENSTGUG00000001054) #21 MAML1 (ENSTGUG00000001049) #22 ENSTGUG00000001044 #23 MGAT4B (ENSTGUG00000001033) #24 SQSTM1 (ENSTGUG00000001022) #25 ENSTGUG00000021129 TBC1D9B (ENSTGUG00000001013) #26 RNF130 (ENSTGUG00000001009) #27 FLT4 (ENSTGUG00000000983) #33 ENSTGUG00000027380 ENSTGUG00000000982 HMGXB3 (ENSTGUG00000000975) CSF1R (ENSTGUG00000000965) PDGFRB (ENSTGUG00000000942) ENSTGUG00000000941 SLC6A7 (ENSTGUG00000000917) CAMK2A (ENSTGUG00000000887) Common canary MODERN SPECIES 16 WNT8A (ENSSCAG00000011117) NME5 (ENSSCAG00000011123) HNRNPAB (ENSSCAG00000011128) PHYKPL (ENSSCAG00000011133) CLK4 (ENSSCAG00000011140) #8 RASGEF1C (ENSSCAG00000011146) MAPK9 (ENSSCAG00000011152) #28 GFPT2 (ENSSCAG00000011157) #29 CNOT6 (ENSSCAG00000011162) #31 ADAMTS2 (ENSSCAG00000011211) #18 RUFY1 (ENSSCAG00000011477) #19 ENSSCAG00000011489 ##20 ENSSCAG00000011506 ENSSCAG00000011513 #23 CANX (ENSSCAG00000011524) #21 MAML1 (ENSSCAG00000011526) #22 ENSSCAG00000011528 #23 MGAT4B (ENSSCAG00000011538) #24 SQSTM1 (ENSSCAG00000011545) #25 ENSSCAG00000011551 TBC1D9B (ENSSCAG00000011597) #26 RNF130 (ENSSCAG00000011779) #27 FLT4 (ENSSCAG00000011785) #33 ENSSCAG00000011795 ENSSCAG00000011798 HMGXB3 (ENSSCAG00000011802) CSF1R (ENSSCAG00000011805) PDGFRB (ENSSCAG00000011809) ENSSCAG00000011822 SLC6A7 (ENSSCAG00000011824) ENSSCAG00000011830 Galloanserae ANCESTRAL SPECIES 14 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000163514.C ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00390000017909 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000155150.b.b Anatidae ANCESTRAL SPECIES 15 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000163514.C ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00390000017909 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358.c #33 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b ENSGT00940000157656.a Pink-footed goose MODERN SPECIES 9 WNT8A (ENSABRG00000003621) NME5 (ENSABRG00000003571) HNRNPAB (ENSABRG00000003559) PHYKPL (ENSABRG00000003395) CLK4 (ENSABRG00000003361) #8 RASGEF1C (ENSABRG00000003330) MAPK9 (ENSABRG00000003268) #28 GFPT2 (ENSABRG00000003156) #29 CNOT6 (ENSABRG00000002765) #31 ADAMTS2 (ENSABRG00000002027) #18 RUFY1 (ENSABRG00000001121) #19 ENSABRG00000000385 ##20 ENSABRG00000018456 ENSABRG00000018451 #23 CANX (ENSABRG00000018390) #21 MAML1 (ENSABRG00000018368) #22 ENSABRG00000018364 #23 MGAT4B (ENSABRG00000018285) #24 SQSTM1 (ENSABRG00000018209) #25 ENSABRG00000018206 TBC1D9B (ENSABRG00000017814) #26 RNF130 (ENSABRG00000017775) #27 FLT4 (ENSABRG00000017535) #33 ENSABRG00000017496 HMGXB3 (ENSABRG00000017493) CSF1R (ENSABRG00000017483) PDGFRB (ENSABRG00000017474) ENSABRG00000017472 SLC6A7 (ENSABRG00000017465) ENSABRG00000017460 ARSI (ENSABRG00000017457) Duck MODERN SPECIES 5 NME5 (ENSAPLG00000013940) PHYKPL (ENSAPLG00000014272) HNRNPAB (ENSAPLG00000014040) ENSAPLG00000014525 CLK4 (ENSAPLG00000014787) #8 RASGEF1C (ENSAPLG00000015248) MAPK9 (ENSAPLG00000013460) #28 GFPT2 (ENSAPLG00000012941) #29 CNOT6 (ENSAPLG00000012715) #31 ENSAPLG00000001038 ADAMTS2 (ENSAPLG00000012527) #18 RUFY1 (ENSAPLG00000010790) #19 ENSAPLG00000010309 ##20 ENSAPLG00000029808 ENSAPLG00000018622 #23 MAML1 (ENSAPLG00000009517) #22 ENSAPLG00000009497 #23 MGAT4B (ENSAPLG00000008886) #24 CANX (ENSAPLG00000009588) #21 MRNIP (ENSAPLG00000008639) ENSAPLG00000016862 TBC1D9B (ENSAPLG00000008106) #26 ENSAPLG00000007868 #33 RNF130 (ENSAPLG00000007959) #27 FLT4 (ENSAPLG00000005955) #33 ENSAPLG00000011578 ENSAPLG00000018926 ENSAPLG00000021315 ENSAPLG00000005491 CSF1R (ENSAPLG00000013023) PDGFRB (ENSAPLG00000013101) Phasianidae ANCESTRAL SPECIES 14 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000163514.C.dc ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413.c #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000155150.b.b Japanese quail MODERN SPECIES 4 WNT8A (ENSCJPG00005005215) NME5 (ENSCJPG00005005216) HNRNPAB (ENSCJPG00005005218) PHYKPL (ENSCJPG00005005220) CLK4 (ENSCJPG00005005226) #8 RASGEF1C (ENSCJPG00005005236) MAPK9 (ENSCJPG00005005246) #28 GFPT2 (ENSCJPG00005005253) #29 CNOT6 (ENSCJPG00005005257) #31 ADAMTS2 (ENSCJPG00005005259) #18 RUFY1 (ENSCJPG00005005260) #19 ENSCJPG00005005262 ##20 ENSCJPG00005005263 ENSCJPG00005005264 #23 CANX (ENSCJPG00005005265) #21 MAML1 (ENSCJPG00005005266) #22 ENSCJPG00005005267 #23 MGAT4B (ENSCJPG00005005272) #24 SQSTM1 (ENSCJPG00005005275) #25 ENSCJPG00005005466 TBC1D9B (ENSCJPG00005005467) #26 RNF130 (ENSCJPG00005005476) #27 FLT4 (ENSCJPG00005005537) #33 ENSCJPG00005005646 ENSCJPG00005005647 HMGXB3 (ENSCJPG00005005648) CSF1R (ENSCJPG00005005658) PDGFRB (ENSCJPG00005005661) ENSCJPG00005005664 SLC6A7 (ENSCJPG00005005672) CAMK2A (ENSCJPG00005006530) Phasianidae_b ANCESTRAL SPECIES 18 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000163514.C.dc ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413.c #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000164917 ENSGT00940000153503.b ##20 ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.g.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b Turkey MODERN SPECIES 6 ENSMGAG00000020896 ENSMGAG00000006543 ENSMGAG00000006665 ENSMGAG00000006839 SLC6A7 (ENSMGAG00000006793) ENSMGAG00000006864 ENSMGAG00000006856 ENSMGAG00000006974 ENSMGAG00000015454 ENSMGAG00000020278 ENSMGAG00000006995 #33 ENSMGAG00000007091 #27 ENSMGAG00000007111 #26 SQSTM1 (ENSMGAG00000007163) #25 ENSMGAG00000019623 MAML1 (ENSMGAG00000015455) #22 ENSMGAG00000007235 #23 MGAT4B (ENSMGAG00000007181) #24 ENSMGAG00000007250 #21 ENSMGAG00000007364 #23 ENSMGAG00000007380 ENSMGAG00000007328 ##20 ENSMGAG00000016936 #19 ENSMGAG00000017243 #18 ENSMGAG00000007477 #18 ENSMGAG00000007499 #31 ENSMGAG00000019477 #29 ENSMGAG00000007504 #29 ENSMGAG00000007540 #28 ENSMGAG00000007606 #8 ENSMGAG00000007555 Chicken MODERN SPECIES 4 NME5 (ENSGALG00010015198) PHYKPL (ENSGALG00010015182) HNRNPAB (ENSGALG00010015142) ENSGALG00010015122 CLK4 (ENSGALG00010012880) #8 RASGEF1C (ENSGALG00010015260) MAPK9 (ENSGALG00010015175) #28 GFPT2 (ENSGALG00010015161) #29 CNOT6 (ENSGALG00010015156) #31 ADAMTS2 (ENSGALG00010015111) #18 RUFY1 (ENSGALG00010015066) #19 DCK2 (ENSGALG00010015049) HNRNPH1 (ENSGALG00010014967) ##20 LTC4SL (ENSGALG00010016985) #23 CANX (ENSGALG00010016947) #21 MAML1 (ENSGALG00010016964) #22 LTC4S (ENSGALG00010016951) #23 MGAT4B (ENSGALG00010016927) #24 SQSTM1 (ENSGALG00010016907) #25 ENSGALG00010016902 TBC1D9B (ENSGALG00010016893) #26 RNF130 (ENSGALG00010016879) #27 FLT4 (ENSGALG00010016867) #33 ENSGALG00010016848 NPY7R (ENSGALG00010016842) HMGXB3 (ENSGALG00010016814) CSF1R (ENSGALG00010016804) PDGFRB (ENSGALG00010016785) CDX1 (ENSGALG00010013660) SLC6A7 (ENSGALG00010013654) CAMK2A (ENSGALG00010013576) African ostrich MODERN SPECIES 151 RASGEF1C (ENSSCUG00000003111) MAPK9 (ENSSCUG00000003101) #28 GFPT2 (ENSSCUG00000003064) #29 CNOT6 (ENSSCUG00000003037) #31 ADAMTS2 (ENSSCUG00000003011) #18 RUFY1 (ENSSCUG00000002990) #19 ENSSCUG00000002988 ##20 ENSSCUG00000002987 ENSSCUG00000002986 ENSSCUG00000002985 #23 CANX (ENSSCUG00000002981) #21 MAML1 (ENSSCUG00000002977) #22 ENSSCUG00000002973 #23 MGAT4B (ENSSCUG00000002969) #24 SQSTM1 (ENSSCUG00000002963) #25 TBC1D9B (ENSSCUG00000002940) #26 RNF130 (ENSSCUG00000002936) #27 FLT4 (ENSSCUG00000002935) #33 ENSSCUG00000002934 ENSSCUG00000002932 HMGXB3 (ENSSCUG00000002931) CSF1R (ENSSCUG00000002929) PDGFRB (ENSSCUG00000002926) CDX1 (ENSSCUG00000002924) SLC6A7 (ENSSCUG00000002922) ENSSCUG00000002920 ENSSCUG00000002919 Australian saltwater crocodile MODERN SPECIES 34 ENSCPRG00005011444 CLK4 (ENSCPRG00005011465) #8 RASGEF1C (ENSCPRG00005011474) MAPK9 (ENSCPRG00005011481) #28 ENSCPRG00005011483 GFPT2 (ENSCPRG00005011486) #29 CNOT6 (ENSCPRG00005011509) #31 ENSCPRG00005011522 ADAMTS2 (ENSCPRG00005011547) #18 RUFY1 (ENSCPRG00005011625) #19 ENSCPRG00005011626 ##20 ENSCPRG00005011644 CBY3 (ENSCPRG00005011659) ENSCPRG00005011664 #23 CANX (ENSCPRG00005011671) #21 MAML1 (ENSCPRG00005011695) #22 ENSCPRG00005011702 #23 MGAT4B (ENSCPRG00005011711) #24 SQSTM1 (ENSCPRG00005011756) #25 TBC1D9B (ENSCPRG00005011777) #26 RNF130 (ENSCPRG00005012289) #27 FLT4 (ENSCPRG00005012318) #33 ENSCPRG00005012347 ENSCPRG00005012348 HMGXB3 (ENSCPRG00005012352) CSF1R (ENSCPRG00005012357) PDGFRB (ENSCPRG00005012378) CDX1 (ENSCPRG00005012394) SLC6A7 (ENSCPRG00005012401) ENSCPRG00005012440 ARSI (ENSCPRG00005012545) Cryptodira ANCESTRAL SPECIES 15 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00990000206303 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000153137.a.b.a ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.h #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b Testudinoidea ANCESTRAL SPECIES 5 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00990000206303 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000153137.a.b.a ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.h #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465.k #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b Emydidae ANCESTRAL SPECIES 11 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00990000206303 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000153137.a.b.a ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.h #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465.k #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b Three-toed box turtle MODERN SPECIES 306 PHYKPL (ENSTMTG00000021627) CLK4 (ENSTMTG00000021774) #8 ENSTMTG00000021776 ENSTMTG00000021780 ENSTMTG00000021783 MAPK9 (ENSTMTG00000021786) #28 GFPT2 (ENSTMTG00000021791) #29 CNOT6 (ENSTMTG00000021799) #31 ENSTMTG00000021810 ADAMTS2 (ENSTMTG00000021825) #18 RUFY1 (ENSTMTG00000021859) #19 ENSTMTG00000021863 ##20 CBY3 (ENSTMTG00000021868) ENSTMTG00000021871 #23 CANX (ENSTMTG00000021875) #21 MAML1 (ENSTMTG00000021882) #22 ENSTMTG00000021885 #23 MGAT4B (ENSTMTG00000021892) #24 SQSTM1 (ENSTMTG00000021899) #25 MRNIP (ENSTMTG00000021907) ENSTMTG00000021915 #26 ENSTMTG00000021922 #27 ENSTMTG00000021926 #27 FLT4 (ENSTMTG00000021944) #33 ENSTMTG00000022061 ENSTMTG00000022065 HMGXB3 (ENSTMTG00000022068) CSF1R (ENSTMTG00000022078) PDGFRB (ENSTMTG00000022087) ENSTMTG00000022099 SLC6A7 (ENSTMTG00000022103) painted turtle MODERN SPECIES 17 WNT8A (ENSCPBG00000008804) NME5 (ENSCPBG00000008814) HNRNPAB (ENSCPBG00000008819) PHYKPL (ENSCPBG00000008828) CLK4 (ENSCPBG00000008860) #8 RASGEF1C (ENSCPBG00000008876) MAPK9 (ENSCPBG00000008892) #28 GFPT2 (ENSCPBG00000008900) #29 CNOT6 (ENSCPBG00000008908) #31 ADAMTS2 (ENSCPBG00000008971) #18 RUFY1 (ENSCPBG00000009504) #19 ENSCPBG00000009511 ##20 CBY3 (ENSCPBG00000009516) CANX (ENSCPBG00000009538) #21 ENSCPBG00000009559 #23 MAML1 (ENSCPBG00000009562) #22 ENSCPBG00000009566 #23 MGAT4B (ENSCPBG00000009577) #24 SQSTM1 (ENSCPBG00000009588) #25 MRNIP (ENSCPBG00000009592) TBC1D9B (ENSCPBG00000009598) #26 RNF130 (ENSCPBG00000009611) #27 FLT4 (ENSCPBG00000009620) #33 ENSCPBG00000009632 ENSCPBG00000009634 HMGXB3 (ENSCPBG00000009638) CSF1R (ENSCPBG00000009658) PDGFRB (ENSCPBG00000009762) ENSCPBG00000010062 SLC6A7 (ENSCPBG00000010064) ENSCPBG00000010071 Testudinidae ANCESTRAL SPECIES 16 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00990000206303 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000153137.a.b.a ENSGT00940000160738.g.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.h #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465.k #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b Abingdon island giant tortoise MODERN SPECIES 237 RUFY1 (ENSCABG00000013374) #19 ENSCABG00000013364 ##20 CBY3 (ENSCABG00000013355) ENSCABG00000013352 #23 CANX (ENSCABG00000013349) #21 MAML1 (ENSCABG00000013344) #22 ENSCABG00000013340 #23 MGAT4B (ENSCABG00000013290) #24 SQSTM1 (ENSCABG00000013281) #25 ENSCABG00000013271 TBC1D9B (ENSCABG00000013268) #26 RNF130 (ENSCABG00000013266) #27 FLT4 (ENSCABG00000013263) #33 ENSCABG00000013262 ENSCABG00000013261 HMGXB3 (ENSCABG00000013259) CSF1R (ENSCABG00000013256) PDGFRB (ENSCABG00000013252) ENSCABG00000013250 SLC6A7 (ENSCABG00000013248) ENSCABG00000013106 Goode s thornscrub tortoise MODERN SPECIES 22 NME5 (ENSGEVG00005005872) HNRNPAB (ENSGEVG00005005840) PHYKPL (ENSGEVG00005005802) CLK4 (ENSGEVG00005005769) #8 ENSGEVG00005005740 ENSGEVG00005005718 MAPK9 (ENSGEVG00005005690) #28 GFPT2 (ENSGEVG00005005244) #29 CNOT6 (ENSGEVG00005005127) #31 ADAMTS2 (ENSGEVG00005004876) #18 RUFY1 (ENSGEVG00005004747) #19 ENSGEVG00005004646 ##20 CBY3 (ENSGEVG00005004582) ENSGEVG00005004559 #23 CANX (ENSGEVG00005004531) #21 MAML1 (ENSGEVG00005004480) #22 MGAT4B (ENSGEVG00005004436) #24 SQSTM1 (ENSGEVG00005004406) #25 ENSGEVG00005004379 TBC1D9B (ENSGEVG00005004291) #26 RNF130 (ENSGEVG00005004213) #27 FLT4 (ENSGEVG00005004155) #33 ENSGEVG00005004116 ENSGEVG00005004104 HMGXB3 (ENSGEVG00005004074) CSF1R (ENSGEVG00005004047) PDGFRB (ENSGEVG00005004021) ENSGEVG00005015618 SLC6A7 (ENSGEVG00005015551) ENSGEVG00005015248 ARSI (ENSGEVG00005015155) Chinese turtle MODERN SPECIES 2223 MAPK9 (ENSPSIG00000015702) #28 GFPT2 (ENSPSIG00000017124) #29 CNOT6 (ENSPSIG00000017307) #31 ADAMTS2 (ENSPSIG00000017460) #18 ENSPSIG00000018080 RUFY1 (ENSPSIG00000018084) #19 ENSPSIG00000003206 ##20 CBY3 (ENSPSIG00000001279) ENSPSIG00000003648 #23 ENSPSIG00000003895 MAML1 (ENSPSIG00000006251) #22 ENSPSIG00000006651 #23 MGAT4B (ENSPSIG00000006815) #24 SQSTM1 (ENSPSIG00000009647) #25 TBC1D9B (ENSPSIG00000010089) #26 RNF130 (ENSPSIG00000010310) #27 FLT4 (ENSPSIG00000010766) #33 ENSPSIG00000012124 ENSPSIG00000012211 HMGXB3 (ENSPSIG00000012325) CSF1R (ENSPSIG00000013142) PDGFRB (ENSPSIG00000013306) ENSPSIG00000014400 ENSPSIG00000014421 SLC6A7 (ENSPSIG00000014435) CAMK2A (ENSPSIG00000015140) Lepidosauria ANCESTRAL SPECIES 15 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000160738.g.b #23 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.h #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537 ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b tuatara MODERN SPECIES 76 RUFY1 (ENSSPUG00000012668) #19 ENSSPUG00000012650 ENSSPUG00000012604 ##20 ENSSPUG00000012592 #23 CANX (ENSSPUG00000012543) #21 MAML1 (ENSSPUG00000012521) #22 ENSSPUG00000012505 #23 MGAT4B (ENSSPUG00000012489) #24 SQSTM1 (ENSSPUG00000012466) #25 TBC1D9B (ENSSPUG00000012435) #26 RNF130 (ENSSPUG00000012407) #27 FLT4 (ENSSPUG00000012355) #33 ENSSPUG00000012335 ENSSPUG00000012323 HMGXB3 (ENSSPUG00000012293) ENSSPUG00000012177 Episquamata ANCESTRAL SPECIES 4 ENSGT00940000157840 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.h #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537.q ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b Laterata ANCESTRAL SPECIES 1 ENSGT00940000157840 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000164917 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.h #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00390000006124 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537.q ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b Common wall lizard MODERN SPECIES 10 ENSPMRG00000005186 CLK4 (ENSPMRG00000005199) #8 ENSPMRG00000005208 RASGEF1C (ENSPMRG00000005209) ENSPMRG00000005233 MAPK9 (ENSPMRG00000005346) #28 GFPT2 (ENSPMRG00000005986) #29 CNOT6 (ENSPMRG00000006015) #31 ENSPMRG00000006040 ADAMTS2 (ENSPMRG00000006052) #18 RUFY1 (ENSPMRG00000006070) #19 ENSPMRG00000006085 ##20 ENSPMRG00000006105 ENSPMRG00000006119 CANX (ENSPMRG00000006136) #21 MAML1 (ENSPMRG00000006146) #22 LTC4S (ENSPMRG00000006149) #23 MGAT4B (ENSPMRG00000006196) #24 ENSPMRG00000006337 SQSTM1 (ENSPMRG00000006341) #25 TBC1D9B (ENSPMRG00000006347) #26 RNF130 (ENSPMRG00000006358) #27 FLT4 (ENSPMRG00000006396) #33 ENSPMRG00000006576 ENSPMRG00000006587 HMGXB3 (ENSPMRG00000006592) CSF1R (ENSPMRG00000006617) PDGFRB (ENSPMRG00000006636) ENSPMRG00000006678 ENSPMRG00000006684 SLC6A7 (ENSPMRG00000006718) Argentine black and white tegu MODERN SPECIES 1 WNT8A (ENSSMRG00000017357) NME5 (ENSSMRG00000017355) HNRNPAB (ENSSMRG00000017354) PHYKPL (ENSSMRG00000017351) CLK4 (ENSSMRG00000017348) #8 RASGEF1C (ENSSMRG00000017347) MAPK9 (ENSSMRG00000017326) #28 GFPT2 (ENSSMRG00000017323) #29 CNOT6 (ENSSMRG00000017317) #31 ADAMTS2 (ENSSMRG00000017315) #18 RUFY1 (ENSSMRG00000017302) #19 ENSSMRG00000017301 ##20 ENSSMRG00000017247 CBY3 (ENSSMRG00000017244) CANX (ENSSMRG00000017242) #21 MAML1 (ENSSMRG00000017240) #22 LTC4S (ENSSMRG00000017239) #23 MGAT4B (ENSSMRG00000017235) #24 SQSTM1 (ENSSMRG00000017222) #25 MRNIP (ENSSMRG00000017221) TBC1D9B (ENSSMRG00000017219) #26 RNF130 (ENSSMRG00000017217) #27 FLT4 (ENSSMRG00000017187) #33 ENSSMRG00000017184 ENSSMRG00000017161 HMGXB3 (ENSSMRG00000017160) CSF1R (ENSSMRG00000017157) PDGFRB (ENSSMRG00000017145) ENSSMRG00000017111 SLC6A7 (ENSSMRG00000017102) ENSSMRG00000017099 Toxicofera ANCESTRAL SPECIES 3 ENSGT00940000167593 ENSGT00940000157840 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.h #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537.q ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506 ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b ENSGT00940000155150.b.b Lizard MODERN SPECIES 1 ENSACAG00000016845 ENSACAG00000035594 ENSACAG00000038736 ENSACAG00000037767 CLK4 (ENSACAG00000016756) #8 RASGEF1C (ENSACAG00000016734) ENSACAG00000016677 #28 CNOT6 (ENSACAG00000016548) #31 ENSACAG00000037960 ADAMTS2 (ENSACAG00000016472) #18 RUFY1 (ENSACAG00000016379) #19 ENSACAG00000016323 ENSACAG00000016304 CBY3 (ENSACAG00000025487) CANX (ENSACAG00000016222) #21 MAML1 (ENSACAG00000016211) #22 LTC4S (ENSACAG00000029619) #23 MGAT4B (ENSACAG00000016121) #24 SQSTM1 (ENSACAG00000016080) #25 TBC1D9B (ENSACAG00000016000) #26 RNF130 (ENSACAG00000015967) #27 ENSACAG00000015792 #33 ENSACAG00000015787 ENSACAG00000015780 HMGXB3 (ENSACAG00000015661) CSF1R (ENSACAG00000015531) PDGFRB (ENSACAG00000015352) ENSACAG00000041665 SLC6A7 (ENSACAG00000015182) ENSACAG00000038325 ENSACAG00000039708 Elapidae ANCESTRAL SPECIES 2 ENSGT00940000167593 ENSGT00940000157840 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327 #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.h #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537.q ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506.a.b ENSGT00940000155506.b ENSGT00940000155506.a.a ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 Indian cobra MODERN SPECIES 1 NME5 (ENSNNAG00000002331) PHYKPL (ENSNNAG00000002136) HNRNPAB (ENSNNAG00000015921) CLK4 (ENSNNAG00000015875) #8 RASGEF1C (ENSNNAG00000015846) MAPK9 (ENSNNAG00000015812) #28 GFPT2 (ENSNNAG00000015784) #29 CNOT6 (ENSNNAG00000015766) #31 ADAMTS2 (ENSNNAG00000015503) #18 ENSNNAG00000015480 RUFY1 (ENSNNAG00000015452) #19 ENSNNAG00000015290 ##20 ENSNNAG00000015253 ##20 CBY3 (ENSNNAG00000015244) CANX (ENSNNAG00000015226) #21 MAML1 (ENSNNAG00000015209) #22 LTC4S (ENSNNAG00000015194) #23 MGAT4B (ENSNNAG00000015135) #24 SQSTM1 (ENSNNAG00000015110) #25 TBC1D9B (ENSNNAG00000014947) #26 RNF130 (ENSNNAG00000014900) #27 FLT4 (ENSNNAG00000014249) #33 ENSNNAG00000014188 ENSNNAG00000014174 ENSNNAG00000014156 ENSNNAG00000014101 ENSNNAG00000014072 ENSNNAG00000014016 PDGFRB (ENSNNAG00000013967) ENSNNAG00000013947 SLC6A7 (ENSNNAG00000013888) Elapidae_a ANCESTRAL SPECIES 11 ENSGT00940000157840 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327.a #28 ENSGT00940000158327.b #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.h #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537.q ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506.b ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b ENSGT00940000155150.b.b Acanthophiinae ANCESTRAL SPECIES 12 ENSGT00940000167593 ENSGT00940000157840 ENSGT00940000159595 ENSGT00940000154735 ENSGT00940000159222 ENSGT00940000160245 #8 ENSGT00940000161005 ENSGT00940000158327.b #28 ENSGT00940000156413 #29 ENSGT00940000158978 #31 ENSGT00940000156647 #18 ENSGT00940000158334 #19 ENSGT00940000153503.b ##20 ENSGT00940000153137.a.b.a ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.h #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 ENSGT00940000158537.q ENSGT00940000155973.a ENSGT00390000006983 ENSGT00940000155506.b ENSGT00940000157138 ENSGT00940000164078.a ENSGT00940000160823 ENSGT00940000159769.a.b ENSGT00940000155150.b.b Mainland tiger snake MODERN SPECIES 4 ENSNSUG00000003027 WNT8A (ENSNSUG00000003023) NME5 (ENSNSUG00000003018) HNRNPAB (ENSNSUG00000003013) PHYKPL (ENSNSUG00000003010) ENSNSUG00000003008 #8 ENSNSUG00000003006 #8 RASGEF1C (ENSNSUG00000003000) MAPK9 (ENSNSUG00000001062) #28 GFPT2 (ENSNSUG00000000642) #29 CNOT6 (ENSNSUG00000000401) #31 ADAMTS2 (ENSNSUG00000000282) #18 RUFY1 (ENSNSUG00000000250) #19 ENSNSUG00000000189 ##20 CANX (ENSNSUG00000000167) #21 MAML1 (ENSNSUG00000000157) #22 LTC4S (ENSNSUG00000000155) #23 MGAT4B (ENSNSUG00000000140) #24 SQSTM1 (ENSNSUG00000000120) #25 TBC1D9B (ENSNSUG00000000054) #26 RNF130 (ENSNSUG00000000017) #27 FLT4 (ENSNSUG00000017387) #33 ENSNSUG00000017386 ENSNSUG00000017385 HMGXB3 (ENSNSUG00000017381) CSF1R (ENSNSUG00000017380) PDGFRB (ENSNSUG00000017176) ENSNSUG00000017175 SLC6A7 (ENSNSUG00000017174) ENSNSUG00000017173 CAMK2A (ENSNSUG00000017172) Eastern brown snake MODERN SPECIES 6 WNT8A (ENSPTXG00000013422) NME5 (ENSPTXG00000013423) HNRNPAB (ENSPTXG00000013424) PHYKPL (ENSPTXG00000013425) CLK4 (ENSPTXG00000013427) #8 ENSPTXG00000013432 ENSPTXG00000013438 MAPK9 (ENSPTXG00000013445) #28 GFPT2 (ENSPTXG00000013451) #29 CNOT6 (ENSPTXG00000013459) #31 ADAMTS2 (ENSPTXG00000013465) #18 RUFY1 (ENSPTXG00000013471) #19 ENSPTXG00000013472 ##20 CBY3 (ENSPTXG00000013477) CANX (ENSPTXG00000013479) #21 MAML1 (ENSPTXG00000013482) #22 LTC4S (ENSPTXG00000013484) #23 MGAT4B (ENSPTXG00000013485) #24 SQSTM1 (ENSPTXG00000013486) #25 TBC1D9B (ENSPTXG00000013487) #26 RNF130 (ENSPTXG00000013488) #27 FLT4 (ENSPTXG00000013489) #33 ENSPTXG00000013500 ENSPTXG00000013505 HMGXB3 (ENSPTXG00000013506) CSF1R (ENSPTXG00000013509) PDGFRB (ENSPTXG00000013519) ENSPTXG00000013573 SLC6A7 (ENSPTXG00000013578) ENSPTXG00000013584 CAMK2A (ENSPTXG00000013592) Blue-lipped sea krait DUPLICATION Blue-lipped sea krait MODERN SPECIES 4904 ENSLLTG00000008347 ##20 CBY3 (ENSLLTG00000008463) CANX (ENSLLTG00000008523) #21 ENSLLTG00000008559 #22 Blue-lipped sea krait MODERN SPECIES 9093 ENSLLTG00000013494 #22 ENSLLTG00000013275 #23 Anura ANCESTRAL SPECIES 275 ENSGT00940000160738.d.b #23 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.d.a #23 ENSGT00940000156526.a #24 ENSGT00390000002781 #25 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT00940000159358 #33 Frog MODERN SPECIES 3 adra1b (ENSXETG00000043868) ENSXETG00000032320 ENSXETG00000046538 ENSXETG00000038193 ENSXETG00000031824 ENSXETG00000049460 glra1 (ENSXETG00000001966) ENSXETG00000043513 nmur2 (ENSXETG00000001947) ENSXETG00000044367 gria1 (ENSXETG00000001922) ENSXETG00000035756 fam114a2 (ENSXETG00000034241) gtf3c3 (ENSXETG00000027469) mfap3 (ENSXETG00000003680) maml1 (ENSXETG00000011243) #22 ltc4s.1 (ENSXETG00000045810) #23 ENSXETG00000043107 mgat4b (ENSXETG00000011234) #24 cracr2a (ENSXETG00000040901) ENSXETG00000048538 parp11 (ENSXETG00000011229) tigar (ENSXETG00000005971) fgf23.2 (ENSXETG00000026353) fgf23.1 (ENSXETG00000043568) fgf6 (ENSXETG00000049430) ENSXETG00000005967 c12orf4 (ENSXETG00000005966) rad51ap1 (ENSXETG00000011389) caprin2 (ENSXETG00000007516) ipo8 (ENSXETG00000007514) Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000017282 ENSLLEG00000017329 ENSLLEG00000017421 ENSLLEG00000017447 PCDH1 (ENSLLEG00000017533) ENSLLEG00000018025 ENSLLEG00000018042 ENSLLEG00000018064 ENSLLEG00000018110 ENSLLEG00000018145 ENSLLEG00000018393 PCDH12 (ENSLLEG00000018488) ENSLLEG00000018550 #23 CANX (ENSLLEG00000018685) #21 ENSLLEG00000018852 MAML1 (ENSLLEG00000018881) #22 ENSLLEG00000018955 LTC4S (ENSLLEG00000019025) #23 ENSLLEG00000019099 MGAT4B (ENSLLEG00000019143) #24 ENSLLEG00000019507 ENSLLEG00000019524 UBE2E1 (ENSLLEG00000019548) ENSLLEG00000019670 #25 TBC1D9B (ENSLLEG00000020024) #26 RNF130 (ENSLLEG00000020465) #27 FLT4 (ENSLLEG00000021066) #33 ENSLLEG00000021342 ENSLLEG00000021380 ENSLLEG00000021510 ENSLLEG00000021532 Coelacanth MODERN SPECIES 476 PCDH1 (ENSLACG00000015969) ENSLACG00000013425 ARAP3 (ENSLACG00000012937) ENSLACG00000012866 MGAT4B (ENSLACG00000012591) #24 SQSTM1 (ENSLACG00000012177) #25 ENSLACG00000012135 ENSLACG00000012057 ENSLACG00000011951 ENSLACG00000011904 PCDH12 (ENSLACG00000011665) ENSLACG00000011565 #23 CANX (ENSLACG00000011213) #21 MAML1 (ENSLACG00000010918) #22 ENSLACG00000010673 #23 FCHSD1 (ENSLACG00000010262) ENSLACG00000010113 hdac3 (ENSLACG00000009761) DIAPH1 (ENSLACG00000008375) ENSLACG00000007072 ENSLACG00000007011 ENSLACG00000006212 ENSLACG00000003645 Actinopterygii ANCESTRAL SPECIES 30 ENSGT00510000048167.b.b ENSGT00940000153322.B.d ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000155437 ENSGT00390000015484.i ENSGT01050000244840.A.b.a ENSGT00940000157465 #27 ENSGT00940000178460 ENSGT00940000158554 #26 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000153137.a.b ENSGT00940000160403 ENSGT00940000155521 ENSGT00940000155317.a.b ENSGT00390000002137 ENSGT00950000186323 ENSGT00940000158371 ENSGT01060000248588.a.c.a ENSGT01030000235223 ENSGT00940000164983 ENSGT00940000164468 ENSGT01020000230605 ENSGT00940000165118 ENSGT00940000164725 Neopterygii ANCESTRAL SPECIES 53 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b ENSGT00940000153322.B.d.b ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000155437 ENSGT00940000157465 #27 ENSGT00940000178460 ENSGT00940000158554 #26 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000153137.a.b ENSGT00940000160403 ENSGT00940000155317.a.b ENSGT00390000002137 ENSGT00940000161122 ENSGT00940000166070 ENSGT00950000186323 ENSGT00940000158371 ENSGT01060000248588.a.c.a ENSGT00940000159910 ENSGT00940000163777.a ENSGT00940000164983 ENSGT00940000164468.a.a.b.a.a.a.a ENSGT00940000165118.a Osteoglossocephalai ANCESTRAL SPECIES 163 ENSGT00940000155521.a.a ENSGT00390000015484.i ENSGT01050000244840.A.b.a ENSGT00940000157465 #27 ENSGT00940000178460 ENSGT00940000158554 #26 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000153137.a.b ENSGT00940000160403 ENSGT00940000155317.a.b ENSGT00390000002137 ENSGT00940000166070 ENSGT00950000186323 ENSGT00940000158371 ENSGT01060000248588.a.c.a ENSGT01030000235223 ENSGT00940000159910 ENSGT00940000163777.a ENSGT00940000164983.d ENSGT00940000164468.a.a.b.a.a.a.a ENSGT00940000165118.a.a.a.a.b.b Clupeocephala ANCESTRAL SPECIES 313 ENSGT00940000157645.f ENSGT00940000155521.a.a ENSGT00390000015484.i ENSGT01050000244840.A.b.a ENSGT00940000157465 #27 ENSGT00940000178460 ENSGT00940000158554 #26 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000153137.a.b ENSGT00940000160403 ENSGT00940000181346 ENSGT00690000103768 Otomorpha ANCESTRAL SPECIES 125 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000160403 ENSGT00940000155317.a.b ENSGT00950000183159.a.v.b ENSGT00940000159958.d ENSGT00390000011368 ENSGT00940000155372 ENSGT00390000012346 ENSGT00940000155988.d ENSGT00940000154372.a.b.b ENSGT00940000154372.a.a.a ENSGT00530000063586.b.c.b ENSGT00390000010628.b ENSGT00390000005639.a.a.m ENSGT00390000000470.n Clupeiformes ANCESTRAL SPECIES 20 ENSGT00390000015511 ENSGT00940000154508.a.a.s.b ENSGT00520000055589.d.a.a ENSGT00940000163251.b.j ENSGT00940000163251.b.i ENSGT00390000006550 ENSGT00390000014635 ENSGT00390000006413 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT01030000237568 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000160403 ENSGT00940000155317.a.b ENSGT00950000183159.a.v.b ENSGT00940000159958.d ENSGT00390000011368 ENSGT00940000155372 ENSGT00390000012346 ENSGT00940000155988.d ENSGT00940000154372.a.b.b ENSGT00940000154372.a.a.a ENSGT00530000063586.b.c.b ENSGT00390000010628.b ENSGT00390000000973.a.a ENSGT00940000156333 Atlantic herring MODERN SPECIES 12 ENSCHAG00000024027 F2RL3 (ENSCHAG00000024022) lect2.1 (ENSCHAG00000024002) ENSCHAG00000023989 ENSCHAG00000023908 hars (ENSCHAG00000023816) tmco6 (ENSCHAG00000023793) abhd18 (ENSCHAG00000023675) rnf103 (ENSCHAG00000023654) immt (ENSCHAG00000023348) ptcd3 (ENSCHAG00000023293) POLR1A (ENSCHAG00000021078) ENSCHAG00000021000 sqstm1 (ENSCHAG00000020888) #25 mgat4b (ENSCHAG00000020498) #24 MAML1 (ENSCHAG00000020475) #22 ENSCHAG00000020469 #23 ENSCHAG00000020383 PCDH12 (ENSCHAG00000020375) ENSCHAG00000020368 ENSCHAG00000020350 phox2bb (ENSCHAG00000020341) tmem33 (ENSCHAG00000020332) ccna2 (ENSCHAG00000020323) bbs7 (ENSCHAG00000020200) anxa5a (ENSCHAG00000020107) ENSCHAG00000020097 fgfbp2a (ENSCHAG00000020069) prom1a (ENSCHAG00000018555) TAPT1 (ENSCHAG00000017540) FAM193B (ENSCHAG00000017522) Denticle herring MODERN SPECIES 9 rmnd5b (ENSDCDG00000023430) aldob (ENSDCDG00000023422) acsl1b (ENSDCDG00000017140) STOX2 (ENSDCDG00000017061) ENSDCDG00000017056 ENSDCDG00000017048 trappc11 (ENSDCDG00000017017) abhd18 (ENSDCDG00000016997) rnf103 (ENSDCDG00000016994) immt (ENSDCDG00000015430) ptcd3 (ENSDCDG00000015393) POLR1A (ENSDCDG00000015349) sqstm1 (ENSDCDG00000015336) #25 mgat4b (ENSDCDG00000014646) #24 canx (ENSDCDG00000013790) #21 MAML1 (ENSDCDG00000013778) #22 LTC4S (ENSDCDG00000013776) #23 PCDH12 (ENSDCDG00000013775) ENSDCDG00000013772 ENSDCDG00000013771 LIMCH1 (ENSDCDG00000010937) phox2bb (ENSDCDG00000010823) tmem33 (ENSDCDG00000010814) ccna2 (ENSDCDG00000010811) bbs7 (ENSDCDG00000010792) anxa5a (ENSDCDG00000009802) ENSDCDG00000009756 prom1a (ENSDCDG00000008950) TAPT1 (ENSDCDG00000006039) FAM193B (ENSDCDG00000005653) DDX41 (ENSDCDG00000028280) Otophysi ANCESTRAL SPECIES 10 ENSGT00940000159358 #33 ENSGT00940000164374.B.c.a.c ENSGT00940000155973.a ENSGT00950000182810.B.a ENSGT00940000161050 ENSGT00390000006413 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000153662.A ENSGT00950000182881.a.b.a.b.z.b ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000160403 ENSGT00940000155317.a.b ENSGT00950000183159.a.v.b ENSGT00940000159958.d ENSGT00940000154495.b.a.a.b ENSGT00940000157622.b ENSGT00940000158505.n.a ENSGT00940000153713.B.c ENSGT00390000016928.d ENSGT00940000159900 ENSGT00940000160999 ENSGT00740000115581.f ENSGT00940000156736.c.a ENSGT00390000010318 Characiphysae ANCESTRAL SPECIES 21 ENSGT00940000159358 #33 ENSGT00940000164374.B.c.a.c ENSGT00940000155973.a ENSGT00950000182810.B.a.pb ENSGT00940000161050 ENSGT00390000006413 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000153662.A ENSGT00950000182881.a.b.a.b.z.b ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000160403 ENSGT00940000155317.a.b ENSGT00950000183159.a.v.b.a ENSGT00940000159958.d ENSGT00940000154495.b.a.a.b ENSGT00940000157622.b ENSGT00940000158505.n.a ENSGT00940000153713.B.c ENSGT00390000016928.d ENSGT00940000159900 ENSGT00940000160999 ENSGT00740000115581.f ENSGT00940000156736.c.a ENSGT00390000010318 Channel catfish MODERN SPECIES 27 csnk1a1 (ENSIPUG00000013544) st3gal5 (ENSIPUG00000013530) atoh8 (ENSIPUG00000013510) PRELID1 (ENSIPUG00000013482) mxd3 (ENSIPUG00000013474) Rnf103 (ENSIPUG00000013447) Immt (ENSIPUG00000013371) ptcd3 (ENSIPUG00000013271) polr1a (ENSIPUG00000013174) prpf19 (ENSIPUG00000013084) tcirg1 (ENSIPUG00000013058) c8h5orf45 (ENSIPUG00000012981) sqstm1 (ENSIPUG00000013021) #25 mgat4b (ENSIPUG00000012887) #24 canx (ENSIPUG00000012736) #21 maml1 (ENSIPUG00000012722) #22 Ltc4s (ENSIPUG00000009679) #23 pcdh12 (ENSIPUG00000009669) ENSIPUG00000009653 ENSIPUG00000009629 ENSIPUG00000009620 phox2bb (ENSIPUG00000009610) smtnl1 (ENSIPUG00000009601) slc43a3b (ENSIPUG00000009499) ENSIPUG00000009577 ENSIPUG00000009473 rtn4rl2b (ENSIPUG00000009468) JAKMIP1 (ENSIPUG00000009398) Wfs1 (ENSIPUG00000009368) spon2b (ENSIPUG00000009340) si:ch211-255i20.3 (ENSIPUG00000009306) Characiphysae_b ANCESTRAL SPECIES 16 ENSGT00940000159358 #33 ENSGT00940000164374.B.c.a.c ENSGT00940000155973.a ENSGT00950000182810.B.a.pb ENSGT00940000161050 ENSGT00390000006413 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000153662.A ENSGT00950000182881.a.b.a.b.z.b ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000160403 ENSGT00940000155317.a.b ENSGT00950000183159.a.v.b.a ENSGT00940000159958.d ENSGT00940000154495.b.a.a.b ENSGT00940000157622.b ENSGT00940000158505.n.a ENSGT00940000153713.B.c ENSGT00390000016928.d ENSGT00940000159900 ENSGT00940000160999 ENSGT00740000115581.f ENSGT00940000156736.c.a ENSGT00390000010318 Characoidei ANCESTRAL SPECIES 47 ENSGT00940000159358 #33 ENSGT00940000164374.B.c.a.c ENSGT00940000155973.a ENSGT00950000182810.B.a.pb ENSGT00940000161050 ENSGT00390000006413 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000153662.A ENSGT00950000182881.a.b.a.b.z.b ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000160403 ENSGT00940000155317.a.b ENSGT00950000183159.a.v.b.a ENSGT00940000159958.d ENSGT00940000154495.b.a.a.b ENSGT00940000157622.b ENSGT00940000158505.n.a ENSGT00940000153713.B.c ENSGT00390000016928.d ENSGT00940000159900 ENSGT00940000160999 ENSGT00740000115581.f ENSGT00940000156736.c.a ENSGT00390000010318 Red-bellied piranha MODERN SPECIES 818 mgat4b (ENSPNAG00000003582) #24 canx (ENSPNAG00000019082) #21 MAML1 (ENSPNAG00000019059) #22 LTC4S (ENSPNAG00000006952) #23 ENSPNAG00000019035 Mexicana tetra MODERN SPECIES 16 rnf103 (ENSAMXG00000036300) immt (ENSAMXG00000011592) ENSAMXG00000040680 ptcd3 (ENSAMXG00000011570) ENSAMXG00000011559 ENSAMXG00000011553 prpf19 (ENSAMXG00000011547) tcirg1b (ENSAMXG00000011532) mrnip (ENSAMXG00000035662) sqstm1 (ENSAMXG00000011526) #25 mgat4b (ENSAMXG00000031451) #24 ENSAMXG00000042248 ENSAMXG00000030588 canx (ENSAMXG00000015162) #21 ENSAMXG00000042710 MAML1 (ENSAMXG00000031783) #22 LTC4S (ENSAMXG00000039412) #23 PCDH12 (ENSAMXG00000015011) ENSAMXG00000029657 ENSAMXG00000037418 ENSAMXG00000036476 phox2bb (ENSAMXG00000043803) smtnl1 (ENSAMXG00000032862) slc43a3b (ENSAMXG00000007555) ENSAMXG00000044034 ENSAMXG00000029059 rtn4rl2b (ENSAMXG00000036104) JAKMIP1 (ENSAMXG00000007587) ENSAMXG00000029800 WFS1 (ENSAMXG00000043676) spon2b (ENSAMXG00000042894) Electric eel MODERN SPECIES 406 ENSEEEG00000020829 FBXO38 (ENSEEEG00000020834) hspa9 (ENSEEEG00000021120) st3gal5 (ENSEEEG00000023810) prpf19 (ENSEEEG00000023811) tcirg1b (ENSEEEG00000023812) ENSEEEG00000023813 sqstm1 (ENSEEEG00000023814) #25 mgat4b (ENSEEEG00000023817) #24 canx (ENSEEEG00000023823) #21 MAML1 (ENSEEEG00000023829) #22 LTC4S (ENSEEEG00000023830) #23 PCDH12 (ENSEEEG00000023831) ENSEEEG00000023832 ENSEEEG00000023833 Cyprinoidei ANCESTRAL SPECIES 74 ENSGT00950000182881.a.b.a.b.z.b ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000163443.m.b ENSGT00940000160403 ENSGT00940000153662.A ENSGT00920000149138 ENSGT00390000016876 ENSGT00390000002313 ENSGT00390000006413 ENSGT00940000161050 ENSGT00950000182810.B.a ENSGT00940000155973.a ENSGT00940000164374.B.c.a.c ENSGT00940000159358 #33 ENSGT00530000063113.C ENSGT00940000159044 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 461 ENSGT01030000237568 ENSGT00390000002781.i #25 ENSGT00940000156526.a.l #24 ENSGT00950000182915.a.a.a.f #21 ENSGT00950000183201.b.b.b.a.c #22 ENSGT00940000160738 #23 ENSGT00940000160403.a ENSGT00940000153662.A.c ENSGT00920000149138.t ENSGT00390000016876.d ENSGT00390000002313.o ENSGT00390000006413.a ENSGT00940000161050.d ENSGT00950000182810.B.a ENSGT00940000155973.a.a.a ENSGT00940000155973.a.b ENSGT00940000164374.B.c.a.c.b ENSGT00940000159358.k #33 ENSGT00530000063113.C.b ENSGT00940000159044.g Cyprininae_a ANCESTRAL SPECIES 554 ENSGT00940000156526.a.l #24 ENSGT00950000182915.a.a.a.f #21 ENSGT00950000183201.b.b.b.a.c #22 ENSGT00940000160738.l #23 ENSGT00940000163443.m.b.a ENSGT00940000160403.b ENSGT00940000153662.A.d ENSGT00920000149138.s ENSGT00390000016876.c ENSGT00390000002313.p ENSGT00390000006413.b ENSGT00940000161050.c Golden-line barbel MODERN SPECIES 410 ENSSGRG00000055531 mgat4b (ENSSGRG00000055532) #24 canx (ENSSGRG00000055533) #21 MAML1 (ENSSGRG00000055534) #22 LTC4S (ENSSGRG00000055535) #23 PCDH12 (ENSSGRG00000055536) prpf19 (ENSSGRG00000055537) POLR1A (ENSSGRG00000055538) ptcd3 (ENSSGRG00000055539) immt (ENSSGRG00000055540) mxd3 (ENSSGRG00000055542) prelid1a (ENSSGRG00000055543) trim105 (ENSSGRG00000055544) ENSSGRG00000055545 flt4 (ENSSGRG00000055546) #33 ergic1 (ENSSGRG00000055547) neurl1b (ENSSGRG00000055548) ENSSGRG00000055549 spink2.1 (ENSSGRG00000055550) Common carp reference MODERN SPECIES 35 fut11 (ENSCCRG00000001853) znf185 (ENSCCRG00000001843) nsdhl (ENSCCRG00000064398) ENSCCRG00000060509 gcna (ENSCCRG00000001814) ENSCCRG00000074983 ENSCCRG00000047247 ENSCCRG00000034557 ENSCCRG00000075512 tcirg1b (ENSCCRG00000010051) ENSCCRG00000071448 sqstm1 (ENSCCRG00000032351) #25 mrnip (ENSCCRG00000073326) mgat4b (ENSCCRG00000026864) #24 canx (ENSCCRG00000009938) #21 ENSCCRG00000026642 #22 LTC4S (ENSCCRG00000026637) #23 itln3 (ENSCCRG00000026551) ENSCCRG00000068406 prpf19 (ENSCCRG00000025301) POLR1A (ENSCCRG00000026214) ptcd3 (ENSCCRG00000018950) immt (ENSCCRG00000064861) rnf103 (ENSCCRG00000061956) mxd3 (ENSCCRG00000050399) prelid1a (ENSCCRG00000050401) npy7r (ENSCCRG00000078807) trim105 (ENSCCRG00000018042) flt4 (ENSCCRG00000044738) #33 ergic1 (ENSCCRG00000018050) dusp1 (ENSCCRG00000018016) Goldfish MODERN SPECIES 5 fmr1 (ENSCARG00000022335) AFF2 (ENSCARG00000023943) fndc5b (ENSCARG00000023975) ldlrap1a (ENSCARG00000024042) maco1a (ENSCARG00000024071) srfbp1 (ENSCARG00000024117) e2f3 (ENSCARG00000024121) ENSCARG00000024139 SOX4 (ENSCARG00000024144) ENSCARG00000001947 ENSCARG00000002010 sqstm1 (ENSCARG00000002079) #25 mgat4b (ENSCARG00000002195) #24 ENSCARG00000002322 canx (ENSCARG00000002333) #21 MAML1 (ENSCARG00000002416) #22 LTC4S (ENSCARG00000002425) #23 itln3 (ENSCARG00000002439) PCDH12 (ENSCARG00000002467) prpf19 (ENSCARG00000002493) POLR1A (ENSCARG00000002625) ptcd3 (ENSCARG00000002761) immt (ENSCARG00000003884) rnf103 (ENSCARG00000003938) mxd3 (ENSCARG00000003961) prelid1a (ENSCARG00000004008) npy7r (ENSCARG00000004030) trim105 (ENSCARG00000004043) flt4 (ENSCARG00000004287) #33 ergic1 (ENSCARG00000007315) dusp1 (ENSCARG00000007325) Cyprininae ANCESTRAL SPECIES 817 ENSGT00940000155085.o ENSGT00940000175313.a ENSGT00950000182881.a.b.a.b.z.b ENSGT00390000006124 ENSGT00390000002781.j #25 ENSGT00940000156526.a.k #24 ENSGT00950000182915.a.a.a.e #21 ENSGT00950000183201.b.b.b.a.d #22 Cyprininae_a ANCESTRAL SPECIES 163 ENSGT00940000167495.a ENSGT00390000006915.c.d.a.b ENSGT00940000160481.d.b ENSGT00940000158983.b ENSGT00530000063872.A.e.a.a ENSGT00940000158229 ENSGT00940000157209.gb.b ENSGT00440000040163.g ENSGT00940000155085.o ENSGT00940000175313.a ENSGT00950000182881.a.b.a.b.z.b.e ENSGT00390000006124 ENSGT00390000002781.j #25 ENSGT00940000156526.a.k #24 ENSGT00950000182915.a.a.a.e #21 ENSGT00950000183201.b.b.b.a.d #22 ENSGT00940000160738.k #23 ENSGT00940000160403.a ENSGT00940000153662.A.c ENSGT00920000149138.t ENSGT00390000016876.d ENSGT00390000002313.o ENSGT00390000006413.a ENSGT00940000161050.d ENSGT00950000182810.B.a ENSGT00940000155973.a.a.a ENSGT00940000155973.a.b ENSGT00940000164374.B.c.a.c.b ENSGT00940000159358.k #33 ENSGT00530000063113.C.b ENSGT00940000159044.g Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 3853 ENSSGRG00000007562 #22 LTC4S (ENSSGRG00000007561) #23 Golden-line barbel MODERN SPECIES 508 pcdh20 (ENSSGRG00000043026) plp1a (ENSSGRG00000043028) RAB9B (ENSSGRG00000043029) fut11 (ENSSGRG00000043030) znf185 (ENSSGRG00000043032) nsdhl (ENSSGRG00000043036) CETN1 (ENSSGRG00000043058) gcna (ENSSGRG00000043088) OGT (ENSSGRG00000043116) ENSSGRG00000043328 tcirg1b (ENSSGRG00000043334) ENSSGRG00000043400 ENSSGRG00000043401 #25 mgat4b (ENSSGRG00000043409) #24 canx (ENSSGRG00000043608) #21 ENSSGRG00000043610 #22 itln3 (ENSSGRG00000043613) PCDH12 (ENSSGRG00000043680) prpf19 (ENSSGRG00000043684) Common carp reference MODERN SPECIES 20 plp1a (ENSCCRG00000020822) ENSCCRG00000020827 fut11 (ENSCCRG00000077531) znf185 (ENSCCRG00000056891) nsdhl (ENSCCRG00000040771) ENSCCRG00000020804 gcna (ENSCCRG00000040991) ENSCCRG00000078359 ENSCCRG00000069100 ENSCCRG00000057286 ENSCCRG00000010165 tcirg1b (ENSCCRG00000064394) sqstm1 (ENSCCRG00000010030) #25 mgat4b (ENSCCRG00000026672) #24 canx (ENSCCRG00000026659) #21 ENSCCRG00000059543 #22 LTC4S (ENSCCRG00000071139) #23 ENSCCRG00000026194 prpf19 (ENSCCRG00000043650) ENSCCRG00000036478 POLR1A (ENSCCRG00000019390) ptcd3 (ENSCCRG00000057359) immt (ENSCCRG00000018425) rnf103 (ENSCCRG00000018411) mxd3 (ENSCCRG00000065117) prelid1a (ENSCCRG00000045616) npy7r (ENSCCRG00000018397) trim105 (ENSCCRG00000063176) flt4 (ENSCCRG00000018078) #33 ergic1 (ENSCCRG00000079580) dusp1 (ENSCCRG00000072996) Goldfish MODERN SPECIES 5 fut11 (ENSCARG00000050803) znf185 (ENSCARG00000050911) OGT (ENSCARG00000050943) nsdhl (ENSCARG00000051281) ENSCARG00000051339 gcna (ENSCARG00000051388) ENSCARG00000051413 ENSCARG00000051425 ENSCARG00000051436 tcirg1b (ENSCARG00000051475) mrnip (ENSCARG00000051678) sqstm1 (ENSCARG00000051762) #25 mgat4b (ENSCARG00000051850) #24 ENSCARG00000053270 canx (ENSCARG00000053318) #21 MAML1 (ENSCARG00000054236) #22 LTC4S (ENSCARG00000054244) #23 PCDH12 (ENSCARG00000054278) prpf19 (ENSCARG00000054308) immt (ENSCARG00000054780) rnf103 (ENSCARG00000057439) mxd3 (ENSCARG00000057468) prelid1a (ENSCARG00000057485) trim105 (ENSCARG00000057499) flt4 (ENSCARG00000057551) #33 ergic1 (ENSCARG00000058036) dusp1 (ENSCARG00000058118) neurl1b (ENSCARG00000058153) spink2.1 (ENSCARG00000058175) uvssa (ENSCARG00000058197) nkx1.2lb (ENSCARG00000058237) Zebrafish MODERN SPECIES 5 spon2b (ENSDARG00000002732) WFS1 (ENSDARG00000074617) JAKMIP1 (ENSDARG00000076090) rtn4rl2b (ENSDARG00000037495) slc43a3b (ENSDARG00000057949) smtnl1 (ENSDARG00000041257) phox2bb (ENSDARG00000091029) dicp2.2 (ENSDARG00000099539) dicp2.1 (ENSDARG00000035101) ENSDARG00000103774 tcirg1b (ENSDARG00000105142) sqstm1 (ENSDARG00000075014) #25 mrnip (ENSDARG00000074071) mgat4b (ENSDARG00000004115) #24 canx (ENSDARG00000037488) #21 MAML1 (ENSDARG00000076466) #22 LTC4S (ENSDARG00000062598) #23 itln3 (ENSDARG00000003523) PCDH12 (ENSDARG00000076594) prpf19 (ENSDARG00000015239) POLR1A (ENSDARG00000098375) ptcd3 (ENSDARG00000103856) immt (ENSDARG00000102874) rnf103 (ENSDARG00000100850) mxd3 (ENSDARG00000098350) prelid1a (ENSDARG00000098671) npy7r (ENSDARG00000103623) trim105 (ENSDARG00000099885) flt4 (ENSDARG00000104453) #33 ergic1 (ENSDARG00000100047) dusp1 (ENSDARG00000100515) Euteleosteomorpha ANCESTRAL SPECIES 263 ENSGT00940000157645.f ENSGT00940000155521.a.a ENSGT00390000015484.i ENSGT01050000244840.A.b.a ENSGT00940000157465 #27 ENSGT00940000178460 ENSGT00940000158554 #26 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000153137.a.b ENSGT00940000160403 ENSGT00940000181346 ENSGT00690000103768 Acanthomorphata ANCESTRAL SPECIES 1 ENSGT00940000155244.d ENSGT00940000173271 ENSGT00940000155341 ENSGT00390000001695 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 ENSGT00390000013344 ENSGT00940000153169.A.b.a ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000160403 ENSGT00940000181346 ENSGT00690000103768 ENSGT00940000155521.a.a ENSGT00390000015484.i ENSGT01050000244840.A.b.a ENSGT00940000157465 #27 ENSGT00940000178460 ENSGT00940000158554 #26 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00390000010318 ENSGT00390000011725.c ENSGT00530000063506.A Euacanthomorphacea ANCESTRAL SPECIES 66 ENSGT00940000153596.A ENSGT00940000155244.d ENSGT00940000155341 ENSGT00390000001695 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 ENSGT00390000013344 ENSGT00940000153169.A.b.a ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000160403 ENSGT00940000181346 ENSGT00690000103768 ENSGT00970000197534 ENSGT00940000155521.a.a ENSGT00390000015484.i ENSGT01050000244840.A.b.a ENSGT00940000157465 #27 ENSGT00940000178460 ENSGT00940000158554 #26 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00390000010318 ENSGT00390000011725.c Percomorphaceae ANCESTRAL SPECIES 78 ENSGT00950000182859.A.a.a.a ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT01050000244840.A.b.a ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000153596.A Percomorphaceae_B ANCESTRAL SPECIES 14 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d Ovalentaria ANCESTRAL SPECIES 15 ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d Atherinomorphae ANCESTRAL SPECIES 9 ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a.a ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a.b ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a Cyprinodontiformes ANCESTRAL SPECIES 8 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a.b ENSGT00940000153169.A.b.b.f ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a Aplocheiloidei ANCESTRAL SPECIES 13 ENSGT00940000158869 ENSGT00390000001695 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a.b ENSGT00940000153169.A.b.b.f ENSGT00940000158625 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00940000159047.d ENSGT00390000011365.a ENSGT00510000046787.e.b ENSGT00940000163780 ENSGT00940000156583 Mangrove rivulus MODERN SPECIES 806 mgat4b (ENSKMAG00000021093) #24 ENSKMAG00000021082 canx (ENSKMAG00000021041) #21 MAML1 (ENSKMAG00000021012) #22 LTC4S (ENSKMAG00000020998) #23 Turquoise killifish MODERN SPECIES 1610 NOA1 (ENSNFUG00015001762) NIPSNAP3 (ENSNFUG00015001752) ABCA1B (ENSNFUG00015001724) SLC44A1 (ENSNFUG00015001707) TBC1D2 (ENSNFUG00015001697) ENSNFUG00015001686 NEUROG1 (ENSNFUG00015001682) PAIP2 (ENSNFUG00015001676) MATR3L1.1 (ENSNFUG00015001659) ENSNFUG00015001638 ENSNFUG00015001519 ENSNFUG00015001455 NFKB1 (ENSNFUG00015000976) mgat4b (ENSNFUG00015000853) #24 CANX (ENSNFUG00015000772) #21 ENSNFUG00015000745 #22 ENSNFUG00015000742 LTC4S (ENSNFUG00015000740) #23 CABZ01005777.1 (ENSNFUG00015000737) ENSNFUG00015000735 EMX3 (ENSNFUG00015000734) ENSNFUG00015000732 ENSNFUG00015000729 B4GALT7 (ENSNFUG00015000722) TMED9 (ENSNFUG00015000701) tmem216 (ENSNFUG00015000692) ENSNFUG00015000686 ENSNFUG00015000678 ENSNFUG00015000674 ENSNFUG00015000670 ENSNFUG00015000666 Cyprinodontoidei ANCESTRAL SPECIES 23 ENSGT00940000158554 #26 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00390000010318 ENSGT00390000011725.c ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT01030000234578.A.b.b ENSGT00950000183132.C ENSGT01030000234799 ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000159322 ENSGT00940000156736.c.a ENSGT00940000160999 ENSGT00940000159900 ENSGT00940000157061.a ENSGT00940000153203.B ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a NAME_4 ANCESTRAL SPECIES 120 ENSGT00940000158554 #26 ENSGT00940000177214 ENSGT00390000002781 #25 ENSGT00390000010318 ENSGT00390000011725.c ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT01030000234578.A.b.b ENSGT00950000183132.C ENSGT01030000234799 ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000159322 ENSGT00940000156736.c.a ENSGT00940000160999 ENSGT00940000159900 ENSGT00940000157061.a ENSGT00940000153203.B ENSGT00940000154808.a.b.l ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a Mummichog MODERN SPECIES 251 DGKQ (ENSFHEG00000007049) mgat4b (ENSFHEG00000006957) #24 canx (ENSFHEG00000006895) #21 MAML1 (ENSFHEG00000006828) #22 LTC4S (ENSFHEG00000006817) #23 slit3 (ENSFHEG00000000178) fgfrl1a (ENSFHEG00000006658) ENSFHEG00000006620 spon2b (ENSFHEG00000006598) ENSFHEG00000006591 ARAP3 (ENSFHEG00000006562) noa1 (ENSFHEG00000006213) nipsnap3a (ENSFHEG00000006185) ENSFHEG00000006168 ENSFHEG00000000166 SLC44A1 (ENSFHEG00000006103) TBC1D2 (ENSFHEG00000006085) neurog1 (ENSFHEG00000006076) ENSFHEG00000006062 Sheepshead minnow MODERN SPECIES 196 ENSCVAG00000007612 polr2b (ENSCVAG00000007676) ENSCVAG00000007685 ENSCVAG00000000209 NFKB1 (ENSCVAG00000007771) DGKQ (ENSCVAG00000007796) mgat4b (ENSCVAG00000007902) #24 canx (ENSCVAG00000007944) #21 MAML1 (ENSCVAG00000007997) #22 LTC4S (ENSCVAG00000008009) #23 ENSCVAG00000008016 slit3 (ENSCVAG00000000223) fgfrl1a (ENSCVAG00000008166) ENSCVAG00000008173 spon2b (ENSCVAG00000008186) zgc:136929 (ENSCVAG00000008256) maea (ENSCVAG00000008268) ENSCVAG00000008324 KLHL3 (ENSCVAG00000008416) fam13b (ENSCVAG00000008488) cxcl14 (ENSCVAG00000008499) LINGO2 (ENSCVAG00000000858) Poeciliinae ANCESTRAL SPECIES 11 ENSGT00940000158554 #26 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00390000010318 ENSGT00390000011725.c ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT01030000234578.A.b.b ENSGT00950000183132.C ENSGT01030000234799 ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000159322 ENSGT00940000156736.c.a ENSGT00940000160999 ENSGT00940000159900 ENSGT00940000157061.a ENSGT00940000153203.B ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a Platyfish MODERN SPECIES 15 ENSXMAG00000027941 ENSXMAG00000025855 ENSXMAG00000023813 #26 ENSXMAG00000015180 rnf130 (ENSXMAG00000015265) #27 F2RL3 (ENSXMAG00000015278) ENSXMAG00000015279 polr2b (ENSXMAG00000015282) ENSXMAG00000025993 ENSXMAG00000015357 NFKB1 (ENSXMAG00000015369) DGKQ (ENSXMAG00000015446) mgat4b (ENSXMAG00000015489) #24 ENSXMAG00000028503 canx (ENSXMAG00000016067) #21 MAML1 (ENSXMAG00000024495) #22 LTC4S (ENSXMAG00000016063) #23 slit3 (ENSXMAG00000015981) ENSXMAG00000021616 fgfrl1a (ENSXMAG00000027004) ENSXMAG00000022117 ENSXMAG00000026825 ENSXMAG00000008748 spon2b (ENSXMAG00000008749) ENSXMAG00000021984 zgc:136929 (ENSXMAG00000006454) ENSXMAG00000021111 maea (ENSXMAG00000005520) HNRNPA0 (ENSXMAG00000019804) HNRNPA0 (ENSXMAG00000029150) KLHL3 (ENSXMAG00000008532) Poecilia ANCESTRAL SPECIES 43 ENSGT00940000158554 #26 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00390000010318 ENSGT00390000011725.c ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT01030000234578.A.b.b ENSGT00950000183132.C ENSGT01030000234799 ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000159322 ENSGT00940000156736.c.a ENSGT00940000160999 ENSGT00940000159900 ENSGT00940000157061.a ENSGT00940000153203.B ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a NAME_6 ANCESTRAL SPECIES 480 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000159322 Amazon molly MODERN SPECIES 921 mgat4b (ENSPFOG00000003209) #24 canx (ENSPFOG00000002828) #21 ENSPFOG00000002715 #22 LTC4S (ENSPFOG00000002700) #23 slit3 (ENSPFOG00000001781) Oryzias ANCESTRAL SPECIES 17 ENSGT00950000182859.A.a.a.a.b ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a ENSGT00510000046787.e.b Oryzias_b ANCESTRAL SPECIES 47 ENSGT00950000182859.A.a.a.a.b ENSGT00940000155109.b ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a ENSGT00510000046787.e.b Indian medaka MODERN SPECIES 37 ENSOMEG00000022594 ENSOMEG00000022560 ENSOMEG00000022533 NFKB1 (ENSOMEG00000022508) DGKQ (ENSOMEG00000022467) mgat4b (ENSOMEG00000022443) #24 canx (ENSOMEG00000022389) #21 ENSOMEG00000022312 #22 LTC4S (ENSOMEG00000022231) #23 ENSOMEG00000022223 ENSOMEG00000022205 ENSOMEG00000022187 b4galt7 (ENSOMEG00000022170) tmed9 (ENSOMEG00000022161) tmem216 (ENSOMEG00000022141) ENSOMEG00000022135 PCDH1 (ENSOMEG00000022101) ENSOMEG00000022057 PCDH12 (ENSOMEG00000022043) gm2a (ENSOMEG00000022026) ENSOMEG00000022005 thoc3 (ENSOMEG00000021977) cplx2 (ENSOMEG00000021947) Javanese ricefish MODERN SPECIES 1 ENSOJAG00000022404 ENSOJAG00000022412 tmem216 (ENSOJAG00000022424) tmed9 (ENSOJAG00000022428) ENSOJAG00000022438 ENSOJAG00000022445 ENSOJAG00000022465 ENSOJAG00000022489 ENSOJAG00000022588 NFKB1 (ENSOJAG00000022598) mgat4b (ENSOJAG00000022654) #24 ENSOJAG00000001577 #21 ENSOJAG00000001607 #22 LTC4S (ENSOJAG00000001666) #23 ENSOJAG00000001686 PCDH1 (ENSOJAG00000001705) PCDH12 (ENSOJAG00000001726) gm2a (ENSOJAG00000001748) ENSOJAG00000001769 ENSOJAG00000001798 cplx2 (ENSOJAG00000001813) ENSOJAG00000001821 slc25a48 (ENSOJAG00000001835) glra1 (ENSOJAG00000001876) g3bp1 (ENSOJAG00000002007) sparc (ENSOJAG00000002111) atox1 (ENSOJAG00000002296) SLC36A1 (ENSOJAG00000002330) Oryzias_a ANCESTRAL SPECIES 65 ENSGT00950000182859.A.a.a.a.b ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a ENSGT00510000046787.e.b Japanese Medaka HdrR MODERN SPECIES 1 ENSORLG00000028816 ENSORLG00000022088 ENSORLG00000027596 ENSORLG00000020414 ENSORLG00000028427 ENSORLG00000025092 ENSORLG00000026271 ENSORLG00000021832 NFKB1 (ENSORLG00000030524) DGKQ (ENSORLG00000019496) mgat4b (ENSORLG00000018573) #24 canx (ENSORLG00000018595) #21 ENSORLG00000027469 MAML1 (ENSORLG00000024588) #22 LTC4S (ENSORLG00000023609) #23 ENSORLG00000025235 ENSORLG00000023242 ENSORLG00000025070 b4galt7 (ENSORLG00000011570) tmed9 (ENSORLG00000011600) tmem216 (ENSORLG00000011578) ENSORLG00000028242 ENSORLG00000029453 ENSORLG00000028614 ENSORLG00000026178 ENSORLG00000011559 ENSORLG00000027731 PCDH12 (ENSORLG00000011535) gm2a (ENSORLG00000024392) Ovalentaria_B ANCESTRAL SPECIES 13 ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00980000198740 ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 Cichlidae ANCESTRAL SPECIES 8 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00980000198740 ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 Pseudocrenilabrinae ANCESTRAL SPECIES 27 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00980000198740 ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 Pseudocrenilabrinae_A ANCESTRAL SPECIES 31 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00690000103768 ENSGT00940000181346 ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00980000198740 ENSGT00940000177647 ENSGT00940000158129 Haplochromini ANCESTRAL SPECIES 25 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000179353 ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00980000198740 ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a Haplochromini_A ANCESTRAL SPECIES 28 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000179353 ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00980000198740 ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a P. nyererei MODERN SPECIES 374 ENSPNYG00000015756 ENSPNYG00000015766 neurog1 (ENSPNYG00000015779) ENSPNYG00000015792 ENSPNYG00000015843 ENSPNYG00000015855 ENSPNYG00000015889 ENSPNYG00000015899 ENSPNYG00000015942 NFKB1 (ENSPNYG00000015980) DGKQ (ENSPNYG00000016046) mgat4b (ENSPNYG00000016071) #24 canx (ENSPNYG00000016110) #21 MAML1 (ENSPNYG00000016125) #22 LTC4S (ENSPNYG00000016155) #23 ENSPNYG00000016169 emx3 (ENSPNYG00000016181) b4galt7 (ENSPNYG00000016193) tmed9 (ENSPNYG00000016215) tmem216 (ENSPNYG00000016231) ENSPNYG00000016260 ENSPNYG00000016274 PCDH1 (ENSPNYG00000016296) ENSPNYG00000016387 ENSPNYG00000016431 PCDH12 (ENSPNYG00000016456) gm2a (ENSPNYG00000016547) ENSPNYG00000016573 ENSPNYG00000016607 Haplochromini_B ANCESTRAL SPECIES 45 ENSGT00940000157174.d ENSGT00940000177365.b.b.a ENSGT00940000159937.f ENSGT00940000177365.a ENSGT00940000159937.e ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000179353 ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00980000198740 ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a Zebra mbuna MODERN SPECIES 1102 ENSMZEG00005003572 ENSMZEG00005003579 ENSMZEG00005003619 ENSMZEG00005003635 neurog1 (ENSMZEG00005003639) ENSMZEG00005003652 ENSMZEG00005003673 ENSMZEG00005003796 ENSMZEG00005003813 ENSMZEG00005003833 ENSMZEG00005003871 NFKB1 (ENSMZEG00005003891) DGKQ (ENSMZEG00005003967) mgat4b (ENSMZEG00005003994) #24 canx (ENSMZEG00005004048) #21 MAML1 (ENSMZEG00005004071) #22 LTC4S (ENSMZEG00005004105) #23 ENSMZEG00005004113 emx3 (ENSMZEG00005004124) b4galt7 (ENSMZEG00005004139) TMED9 (ENSMZEG00005004161) tmem216 (ENSMZEG00005004180) ENSMZEG00005004199 PCDH1 (ENSMZEG00005004220) ENSMZEG00005004284 hspa9 (ENSMZEG00005004296) pde6a (ENSMZEG00005004347) SLC26A2 (ENSMZEG00005004404) HTR4 (ENSMZEG00005004414) lman2 (ENSMZEG00005004451) sparc (ENSMZEG00005004476) Eastern happy MODERN SPECIES 11 ENSACLG00000015682 ENSACLG00000015708 ENSACLG00000015721 TBC1D2 (ENSACLG00000015741) neurog1 (ENSACLG00000015850) ENSACLG00000015874 ENSACLG00000015884 ENSACLG00000015903 ENSACLG00000016125 ENSACLG00000016208 ENSACLG00000016262 NFKB1 (ENSACLG00000016324) DGKQ (ENSACLG00000016414) mgat4b (ENSACLG00000016482) #24 canx (ENSACLG00000016610) #21 MAML1 (ENSACLG00000016672) #22 LTC4S (ENSACLG00000016707) #23 ENSACLG00000016715 emx3 (ENSACLG00000016742) b4galt7 (ENSACLG00000016773) tmed9 (ENSACLG00000016806) tmem216 (ENSACLG00000016820) ENSACLG00000016851 PCDH1 (ENSACLG00000016940) ENSACLG00000016967 ENSACLG00000017059 PCDH12 (ENSACLG00000017113) gm2a (ENSACLG00000017131) ENSACLG00000017142 ENSACLG00000017193 thoc3 (ENSACLG00000017219) Burton s mouthbrooder MODERN SPECIES 486 ENSHBUG00000003972 neurog1 (ENSHBUG00000003982) ENSHBUG00000003991 ENSHBUG00000000095 ENSHBUG00000004043 ENSHBUG00000004084 ENSHBUG00000004096 NFKB1 (ENSHBUG00000004157) DGKQ (ENSHBUG00000004203) mgat4b (ENSHBUG00000004245) #24 canx (ENSHBUG00000004272) #21 MAML1 (ENSHBUG00000004311) #22 LTC4S (ENSHBUG00000004326) #23 ENSHBUG00000004337 emx3 (ENSHBUG00000004351) b4galt7 (ENSHBUG00000004386) tmed9 (ENSHBUG00000004407) tmem216 (ENSHBUG00000004417) Lyretail cichlid MODERN SPECIES 341 ENSNBRG00000013157 SLC44A1 (ENSNBRG00000013177) TBC1D2 (ENSNBRG00000013288) neurog1 (ENSNBRG00000013315) ENSNBRG00000013323 ENSNBRG00000013335 ENSNBRG00000013399 ENSNBRG00000013414 ENSNBRG00000013447 NFKB1 (ENSNBRG00000013462) DGKQ (ENSNBRG00000013510) mgat4b (ENSNBRG00000013586) #24 canx (ENSNBRG00000013618) #21 MAML1 (ENSNBRG00000013633) #22 LTC4S (ENSNBRG00000013645) #23 ENSNBRG00000013670 ENSNBRG00000013698 b4galt7 (ENSNBRG00000013752) tmed9 (ENSNBRG00000013768) tmem216 (ENSNBRG00000013774) ENSNBRG00000013792 PCDH1 (ENSNBRG00000013804) ENSNBRG00000013827 ENSNBRG00000013836 PCDH12 (ENSNBRG00000013849) gm2a (ENSNBRG00000013855) ENSNBRG00000013871 ENSNBRG00000013910 thoc3 (ENSNBRG00000013917) Nile tilapia MODERN SPECIES 11 TBC1D2 (ENSONIG00000004425) neurog1 (ENSONIG00000038395) PAIP2 (ENSONIG00000039154) ENSONIG00000004419 ENSONIG00000035796 ENSONIG00000004400 ENSONIG00000016539 ENSONIG00000004376 ENSONIG00000036649 UBE2D3 (ENSONIG00000004373) NFKB1 (ENSONIG00000004349) ENSONIG00000037579 DGKQ (ENSONIG00000004338) mgat4b (ENSONIG00000004334) #24 canx (ENSONIG00000004319) #21 MAML1 (ENSONIG00000004317) #22 LTC4S (ENSONIG00000004315) #23 ENSONIG00000034776 ENSONIG00000004314 emx3 (ENSONIG00000029650) b4galt7 (ENSONIG00000004308) tmed9 (ENSONIG00000004305) tmem216 (ENSONIG00000004303) ENSONIG00000037929 ENSONIG00000042797 ENSONIG00000004301 ENSONIG00000042025 ENSONIG00000036491 PCDH1 (ENSONIG00000004300) PCDH12 (ENSONIG00000004298) gm2a (ENSONIG00000004295) Midas cichlid MODERN SPECIES 1123 frzb (ENSACIG00000019583) mgat4b (ENSACIG00000019606) #24 canx (ENSACIG00000019635) #21 MAML1 (ENSACIG00000019683) #22 LTC4S (ENSACIG00000019721) #23 Pomacentridae ANCESTRAL SPECIES 163 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625.h ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747.f ENSGT00940000153899.a.a ENSGT00940000155521.a.a Bicolor damselfish MODERN SPECIES 668 ENSSPAG00000023451 NFKB1 (ENSSPAG00000023453) DGKQ (ENSSPAG00000023456) mgat4b (ENSSPAG00000023458) #24 canx (ENSSPAG00000023461) #21 MAML1 (ENSSPAG00000023463) #22 LTC4S (ENSSPAG00000023464) #23 ENSSPAG00000023465 ENSSPAG00000023466 gm2a (ENSSPAG00000023467) PCDH12 (ENSSPAG00000023469) ENSSPAG00000023470 ENSSPAG00000023471 ENSSPAG00000023472 uvssa (ENSSPAG00000023473) Pomacentridae_A ANCESTRAL SPECIES 182 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625.h ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747.f ENSGT00940000153899.a.a ENSGT00940000155521.a.a Amphiprion ANCESTRAL SPECIES 213 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511.a ENSGT00940000169511.b ENSGT00950000182859.A.a.a.a ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625.h ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747.f ENSGT00940000153899.a.a Orange clownfish MODERN SPECIES 4 ENSAPEG00000003740 neurog1 (ENSAPEG00000003773) ENSAPEG00000003779 ENSAPEG00000003791 ENSAPEG00000003827 ENSAPEG00000003849 ENSAPEG00000003875 ENSAPEG00000003941 NFKB1 (ENSAPEG00000004000) ENSAPEG00000004032 ENSAPEG00000004063 ENSAPEG00000004095 mgat4b (ENSAPEG00000004111) #24 ENSAPEG00000004157 canx (ENSAPEG00000004186) #21 MAML1 (ENSAPEG00000004199) #22 LTC4S (ENSAPEG00000004210) #23 ENSAPEG00000004224 ENSAPEG00000004247 emx3 (ENSAPEG00000004282) b4galt7 (ENSAPEG00000004311) tmed9 (ENSAPEG00000004335) tmem216 (ENSAPEG00000004355) ENSAPEG00000004384 ENSAPEG00000004416 ENSAPEG00000004430 ENSAPEG00000004448 PCDH1 (ENSAPEG00000004539) ENSAPEG00000004579 ENSAPEG00000004608 ENSAPEG00000004633 Clown anemonefish MODERN SPECIES 2069 canx (ENSAOCG00000019360) #21 MAML1 (ENSAOCG00000019338) #22 LTC4S (ENSAOCG00000002546) #23 ENSAOCG00000019294 Spiny chromis MODERN SPECIES 1144 mgat4b (ENSAPOG00000006441) #24 canx (ENSAPOG00000006477) #21 MAML1 (ENSAPOG00000006514) #22 LTC4S (ENSAPOG00000006551) #23 ENSAPOG00000006565 DGKQ (ENSAPOG00000006579) ENSAPOG00000006595 Percomorphaceae_C ANCESTRAL SPECIES 16 ENSGT00390000001695 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a Eupercaria ANCESTRAL SPECIES 12 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a Eupecaria_A ANCESTRAL SPECIES 13 ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a Eupecaria_B ANCESTRAL SPECIES 13 ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a Perciformes ANCESTRAL SPECIES 13 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a Cottioidei ANCESTRAL SPECIES 83 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a Lumpfish MODERN SPECIES 1 ENSCLMG00005017769 ENSCLMG00005017760 NFKB1 (ENSCLMG00005017167) DGKQ (ENSCLMG00005017153) mgat4b (ENSCLMG00005017147) #24 ENSCLMG00005017145 ENSCLMG00005017143 canx (ENSCLMG00005016994) #21 MAML1 (ENSCLMG00005016991) #22 LTC4S (ENSCLMG00005016988) #23 ENSCLMG00005016986 ENSCLMG00005016984 emx3 (ENSCLMG00005016982) ENSCLMG00005016981 b4galt7 (ENSCLMG00005016978) tmed9 (ENSCLMG00005016976) ENSCLMG00005016974 ENSCLMG00005016973 ENSCLMG00005016972 ENSCLMG00005016971 ENSCLMG00005016970 ENSCLMG00005016969 PCDH1 (ENSCLMG00005016968) ENSCLMG00005016966 Stickleback MODERN SPECIES 3 lman2 (ENSGACG00000016821) FAT2 (ENSGACG00000016824) mtnr1al (ENSGACG00000016828) SLC36A1 (ENSGACG00000016829) sparc (ENSGACG00000016847) g3bp1 (ENSGACG00000016848) glra1 (ENSGACG00000016854) slc25a48 (ENSGACG00000016856) ENSGACG00000016859 ENSGACG00000016862 ENSGACG00000016868 NFKB1 (ENSGACG00000016876) DGKQ (ENSGACG00000016877) mgat4b (ENSGACG00000016886) #24 canx (ENSGACG00000016892) #21 MAML1 (ENSGACG00000016896) #22 LTC4S (ENSGACG00000016900) #23 ENSGACG00000016901 ENSGACG00000016902 rom1b (ENSGACG00000016903) ccdc88b (ENSGACG00000016915) ENSGACG00000016919 macrod1 (ENSGACG00000016922) FLRT1 (ENSGACG00000016923) fermt3b (ENSGACG00000016924) trpt1 (ENSGACG00000016927) ENSGACG00000016930 ENSGACG00000016933 nxf1a (ENSGACG00000016934) ATG2A (ENSGACG00000016958) trmt112 (ENSGACG00000016967) Perciformes_a ANCESTRAL SPECIES 11 ENSGT00950000182859.A.a.a.a ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a Pike perch MODERN SPECIES 32 mgat4b (ENSSLUG00000005558) #24 canx (ENSSLUG00000005532) #21 ENSSLUG00000005518 #22 LTC4S (ENSSLUG00000005507) #23 ENSSLUG00000005495 emx3 (ENSSLUG00000005484) b4galt7 (ENSSLUG00000005474) tmed9 (ENSSLUG00000005437) tmem216 (ENSSLUG00000005421) ENSSLUG00000005413 ENSSLUG00000005402 ENSSLUG00000005396 ENSSLUG00000005388 PCDH1 (ENSSLUG00000005379) ENSSLUG00000005371 PCDH12 (ENSSLUG00000005352) ENSSLUG00000005345 gm2a (ENSSLUG00000005337) Eupecaria_C ANCESTRAL SPECIES 12 ENSGT00940000177214 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT01050000244840.A.b.a ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a Gilthead seabream MODERN SPECIES 9 ENSSAUG00010004882 tgfbi (ENSSAUG00010004895) ENSSAUG00010004906 ENSSAUG00010004907 ENSSAUG00010004912 ENSSAUG00010004915 ENSSAUG00010004920 ENSSAUG00010004925 ENSSAUG00010004927 ENSSAUG00010004928 ENSSAUG00010004947 NFKB1 (ENSSAUG00010005489) DGKQ (ENSSAUG00010005502) mgat4b (ENSSAUG00010005508) #24 canx (ENSSAUG00010005713) #21 MAML1 (ENSSAUG00010005783) #22 ENSSAUG00010005784 LTC4S (ENSSAUG00010005787) #23 ENSSAUG00010005794 emx3 (ENSSAUG00010005796) b4galt7 (ENSSAUG00010005797) TMED9 (ENSSAUG00010005802) tmem216 (ENSSAUG00010005806) tmed9 (ENSSAUG00010005808) ENSSAUG00010005812 ENSSAUG00010005814 PCDH1 (ENSSAUG00010005818) ENSSAUG00010005820 PCDH12 (ENSSAUG00010005822) gm2a (ENSSAUG00010005825) ENSSAUG00010005828 Eupercaria_incertae_sedis ANCESTRAL SPECIES 14 ENSGT00390000002781 #25 ENSGT00940000177214 ENSGT00940000158554 #26 ENSGT00940000157465 #27 ENSGT01050000244840.A.b.a ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000155109.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a Large yellow croaker MODERN SPECIES ENSLCRG00005001005 ENSLCRG00005001000 #27 ENSLCRG00005000998 #27 F2RL3 (ENSLCRG00005000994) neurog1 (ENSLCRG00005000993) ENSLCRG00005000990 ENSLCRG00005000986 ENSLCRG00005000974 ENSLCRG00005000965 ENSLCRG00005000950 ENSLCRG00005000939 ENSLCRG00005000753 NFKB1 (ENSLCRG00005000662) mgat4b (ENSLCRG00005000407) #24 canx (ENSLCRG00005000360) #21 MAML1 (ENSLCRG00005000350) #22 LTC4S (ENSLCRG00005000346) #23 ENSLCRG00005000343 emx3 (ENSLCRG00005000342) b4galt7 (ENSLCRG00005000335) tmed9 (ENSLCRG00005000329) tmem216 (ENSLCRG00005000324) ENSLCRG00005000320 ENSLCRG00005000316 ENSLCRG00005000314 ENSLCRG00005000310 ENSLCRG00005000305 ENSLCRG00005000303 PCDH1 (ENSLCRG00005000294) ENSLCRG00005000287 ENSLCRG00005000283 European seabass MODERN SPECIES 12 ENSDLAG00005032287 ENSDLAG00005003163 ENSDLAG00005026990 ENSDLAG00005032833 ENSDLAG00005033633 tgfbi (ENSDLAG00005030215) ENSDLAG00005009993 ENSDLAG00005008472 ENSDLAG00005035059 ENSDLAG00005019614 ENSDLAG00005019558 ENSDLAG00005019478 ENSDLAG00005019443 mgat4b (ENSDLAG00005018580) #24 canx (ENSDLAG00005017668) #21 ENSDLAG00005018540 #22 ENSDLAG00005018530 #23 ENSDLAG00005028311 ENSDLAG00005032177 b4galt7 (ENSDLAG00005027918) ENSDLAG00005030962 ENSDLAG00005031216 ENSDLAG00005029692 ENSDLAG00005017536 ENSDLAG00005017516 ENSDLAG00005017512 ENSDLAG00005031337 ENSDLAG00005002542 ENSDLAG00005027344 ENSDLAG00005017453 thoc3 (ENSDLAG00005017426) Ballan wrasse MODERN SPECIES 113 neurog1 (ENSLBEG00000018191) dnali1 (ENSLBEG00000018208) ENSLBEG00000018227 ENSLBEG00000018267 ENSLBEG00000018361 ENSLBEG00000018409 ENSLBEG00000018466 NFKB1 (ENSLBEG00000018512) DGKQ (ENSLBEG00000018579) mgat4b (ENSLBEG00000018661) #24 canx (ENSLBEG00000018739) #21 MAML1 (ENSLBEG00000018807) #22 LTC4S (ENSLBEG00000018819) #23 ENSLBEG00000018827 ENSLBEG00000018842 ENSLBEG00000018858 emx3 (ENSLBEG00000018910) b4galt7 (ENSLBEG00000018940) tmed9 (ENSLBEG00000019077) tmem216 (ENSLBEG00000019120) Tetraodontidae ANCESTRAL SPECIES 191 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a Fugu MODERN SPECIES 5 slc25a48 (ENSTRUG00000002430) cplx2 (ENSTRUG00000028930) thoc3 (ENSTRUG00000002925) ENSTRUG00000003172 gm2a (ENSTRUG00000023982) ELP1 (ENSTRUG00000001880) ENSTRUG00000026768 ENSTRUG00000031678 CPXM1 (ENSTRUG00000003892) SMU1 (ENSTRUG00000004467) CPLX1 (ENSTRUG00000030904) PCGF3 (ENSTRUG00000027521) SLC49A3 (ENSTRUG00000004972) NCBP1 (ENSTRUG00000005287) TSTD2 (ENSTRUG00000005854) MAML1 (ENSTRUG00000005986) #22 LTC4S (ENSTRUG00000006092) #23 ccdc69 (ENSTRUG00000031391) emx3 (ENSTRUG00000030250) b4galt7 (ENSTRUG00000008706) tmed9 (ENSTRUG00000008653) tmem216 (ENSTRUG00000008641) PCDH12 (ENSTRUG00000008500) ENSTRUG00000000394 PCDH1 (ENSTRUG00000026409) ENSTRUG00000029633 SEC24B (ENSTRUG00000010184) hopx (ENSTRUG00000022348) arl9 (ENSTRUG00000021613) ENSTRUG00000010116 srp72 (ENSTRUG00000009831) Tetraodon MODERN SPECIES 12 lman2 (ENSTNIG00000006317) FAT2 (ENSTNIG00000006316) mtnr1al (ENSTNIG00000012951) SLC36A1 (ENSTNIG00000012952) sparc (ENSTNIG00000012953) g3bp1 (ENSTNIG00000012954) glra1 (ENSTNIG00000012955) slc25a48 (ENSTNIG00000012956) ENSTNIG00000012957 thoc3 (ENSTNIG00000012958) ENSTNIG00000012959 ENSTNIG00000012961 ENSTNIG00000012962 gm2a (ENSTNIG00000012960) ENSTNIG00000001603 MAML1 (ENSTNIG00000012963) #22 LTC4S (ENSTNIG00000012964) #23 ENSTNIG00000000748 emx3 (ENSTNIG00000012965) b4galt7 (ENSTNIG00000001663) b4galt7 (ENSTNIG00000012966) tmed9 (ENSTNIG00000012967) PCDH12 (ENSTNIG00000012968) PCDH1 (ENSTNIG00000012969) Percomorphaceae_D ANCESTRAL SPECIES 17 ENSGT00390000001695 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000175795 ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d Carangaria ANCESTRAL SPECIES 15 ENSGT00390000001695 ENSGT00950000183018.b ENSGT00940000154658.b.i.a.h ENSGT00940000157174.d ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a Pleuronectoidei ANCESTRAL SPECIES 116 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a Turbot MODERN SPECIES 4 ENSSMAG00000007718 ENSSMAG00000007699 SRP72 (ENSSMAG00000007639) ENSSMAG00000007631 arl9 (ENSSMAG00000026633) ENSSMAG00000007620 hopx (ENSSMAG00000007609) ENSSMAG00000007541 ENSSMAG00000007528 ENSSMAG00000007463 SLC49A3 (ENSSMAG00000007448) ENSSMAG00000007416 CPLX1 (ENSSMAG00000007389) ENSSMAG00000007338 canx (ENSSMAG00000007308) #21 ENSSMAG00000007301 #22 LTC4S (ENSSMAG00000007287) #23 ENSSMAG00000007271 ENSSMAG00000007213 b4galt7 (ENSSMAG00000007209) ENSSMAG00000007171 ENSSMAG00000007195 ENSSMAG00000007161 ENSSMAG00000029533 ENSSMAG00000022996 ENSSMAG00000005557 ENSSMAG00000023620 ENSSMAG00000007111 ENSSMAG00000035076 ENSSMAG00000007094 ENSSMAG00000029890 Tongue sole MODERN SPECIES 6 SMU1 (ENSCSEG00000012301) CPLX1 (ENSCSEG00000012329) PCGF3 (ENSCSEG00000012338) SLC49A3 (ENSCSEG00000012355) NCBP1 (ENSCSEG00000012377) TSTD2 (ENSCSEG00000012433) SEC24B (ENSCSEG00000012444) ENSCSEG00000012461 lman2 (ENSCSEG00000012470) atox1 (ENSCSEG00000012490) SLC36A1 (ENSCSEG00000012497) mtnr1al (ENSCSEG00000012507) FAT2 (ENSCSEG00000012512) mgat4b (ENSCSEG00000012532) #24 canx (ENSCSEG00000012554) #21 ENSCSEG00000012586 #22 LTC4S (ENSCSEG00000012592) #23 ENSCSEG00000012595 emx3 (ENSCSEG00000012600) b4galt7 (ENSCSEG00000012610) tmed9 (ENSCSEG00000012631) ENSCSEG00000012640 tmem216 (ENSCSEG00000012643) tbpl1 (ENSCSEG00000012646) ENSCSEG00000012656 ENSCSEG00000012682 ENSCSEG00000012698 neurog1 (ENSCSEG00000012706) ENSCSEG00000012714 NFKB1 (ENSCSEG00000012728) DGKQ (ENSCSEG00000012752) Carangaria_A ANCESTRAL SPECIES 17 ENSGT00390000001695 ENSGT00950000183018.b ENSGT00940000154658.b.i.a.h ENSGT00940000157174.d ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a Seriola ANCESTRAL SPECIES 31 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000157174.d ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00980000198740 ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d Greater amberjack MODERN SPECIES 159 mgat4b (ENSSDUG00000014176) #24 canx (ENSSDUG00000014213) #21 MAML1 (ENSSDUG00000014232) #22 LTC4S (ENSSDUG00000014244) #23 ENSSDUG00000014266 emx3 (ENSSDUG00000014279) ENSSDUG00000014286 b4galt7 (ENSSDUG00000014293) TBC1D2 (ENSSDUG00000014307) ENSSDUG00000014321 ENSSDUG00000014332 SLC44A1 (ENSSDUG00000014345) gm2a (ENSSDUG00000014379) PCDH12 (ENSSDUG00000014388) PCDH1 (ENSSDUG00000014393) Yellowtail amberjack MODERN SPECIES 3195 ENSSLDG00000015879 VAV1 (ENSSLDG00000015815) UBL5 (ENSSLDG00000015781) pin1 (ENSSLDG00000015758) ENSSLDG00000015653 ENSSLDG00000014616 ENSSLDG00000014378 ENSSLDG00000014362 ENSSLDG00000014332 fbxl18 (ENSSLDG00000014309) PTCD1 (ENSSLDG00000014261) zgc:112980 (ENSSLDG00000014217) smcr8b (ENSSLDG00000014199) mgat4b (ENSSLDG00000014173) #24 canx (ENSSLDG00000014150) #21 MAML1 (ENSSLDG00000014125) #22 LTC4S (ENSSLDG00000014108) #23 emx3 (ENSSLDG00000014095) b4galt7 (ENSSLDG00000014080) ENSSLDG00000014068 ENSSLDG00000014054 ENSSLDG00000014045 Barramundi perch MODERN SPECIES 463 ENSLCAG00010006588 ENSLCAG00010006633 NFKB1 (ENSLCAG00010006790) DGKQ (ENSLCAG00010006811) mgat4b (ENSLCAG00010006838) #24 canx (ENSLCAG00010006865) #21 MAML1 (ENSLCAG00010006910) #22 LTC4S (ENSLCAG00010006911) #23 ENSLCAG00010006914 emx3 (ENSLCAG00010006916) Anabantaria ANCESTRAL SPECIES 15 ENSGT00390000001695 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000159937 ENSGT00940000167363 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00950000182859.A.a.a.a ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000168305 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000175795 ENSGT00940000155521.a.a ENSGT00940000160403 ENSGT00390000003288 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d Anabantoidei ANCESTRAL SPECIES 11 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000175795 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000168305 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 Climbing perch MODERN SPECIES 22 mtnr1al (ENSATEG00000017184) ENSATEG00000017558 atox1 (ENSATEG00000017575) sparc (ENSATEG00000017589) g3bp1 (ENSATEG00000017646) glra1 (ENSATEG00000017876) slc25a48 (ENSATEG00000017906) ENSATEG00000026908 thoc3 (ENSATEG00000017937) ENSATEG00000017955 ENSATEG00000029734 ENSATEG00000018020 ENSATEG00000018043 mgat4b (ENSATEG00000018078) #24 canx (ENSATEG00000018130) #21 ENSATEG00000018177 #22 LTC4S (ENSATEG00000018191) #23 ENSATEG00000029494 ENSATEG00000027104 b4galt7 (ENSATEG00000027061) ENSATEG00000018306 ENSATEG00000018323 ENSATEG00000018340 ENSATEG00000018380 ENSATEG00000018427 ENSATEG00000018447 ENSATEG00000018501 ENSATEG00000018516 ENSATEG00000018534 ENSATEG00000018598 ENSATEG00000018604 Siamese fighting fish MODERN SPECIES 1 g3bp1 (ENSBSLG00000018181) glra1 (ENSBSLG00000018233) ENSBSLG00000018404 slc25a48 (ENSBSLG00000018412) cplx2 (ENSBSLG00000018425) thoc3 (ENSBSLG00000018438) gm2a (ENSBSLG00000018748) ENSBSLG00000018772 PCDH12 (ENSBSLG00000018808) ENSBSLG00000018840 PCDH1 (ENSBSLG00000018852) ENSBSLG00000018865 mgat4b (ENSBSLG00000018940) #24 ENSBSLG00000002337 canx (ENSBSLG00000002477) #21 MAML1 (ENSBSLG00000002949) #22 LTC4S (ENSBSLG00000002956) #23 ENSBSLG00000002966 emx3 (ENSBSLG00000002975) b4galt7 (ENSBSLG00000003670) tmed9 (ENSBSLG00000003739) tmem216 (ENSBSLG00000003780) DGKQ (ENSBSLG00000003829) NFKB1 (ENSBSLG00000003947) ENSBSLG00000004095 ENSBSLG00000004170 ENSBSLG00000004753 ENSBSLG00000004827 ENSBSLG00000004900 neurog1 (ENSBSLG00000005027) TBC1D2 (ENSBSLG00000005095) Zig-zag eel MODERN SPECIES 1 ENSMAMG00000027354 ENSMAMG00000014007 ENSMAMG00000013911 ENSMAMG00000025355 neurog1 (ENSMAMG00000013881) ENSMAMG00000013851 ENSMAMG00000013840 ENSMAMG00000013806 ENSMAMG00000013744 ENSMAMG00000013695 ENSMAMG00000013622 ENSMAMG00000013592 ENSMAMG00000013527 mgat4b (ENSMAMG00000013534) #24 canx (ENSMAMG00000013509) #21 ENSMAMG00000013493 #22 LTC4S (ENSMAMG00000028039) #23 ENSMAMG00000013449 ENSMAMG00000028293 b4galt7 (ENSMAMG00000013415) ENSMAMG00000013395 ENSMAMG00000013380 ENSMAMG00000013373 ENSMAMG00000013358 ENSMAMG00000013336 ENSMAMG00000013316 ENSMAMG00000013307 ENSMAMG00000013268 thoc3 (ENSMAMG00000013229) ENSMAMG00000013160 slc25a48 (ENSMAMG00000025670) Tiger tail seahorse MODERN SPECIES 181 ENSHCOG00000002874 ENSHCOG00000002880 ENSHCOG00000002896 znf219 (ENSHCOG00000000082) ENSHCOG00000002924 CLCN5 (ENSHCOG00000002932) tnfsf10l (ENSHCOG00000002945) ccnb3 (ENSHCOG00000002952) htr2cl1 (ENSHCOG00000002965) zgc:109889 (ENSHCOG00000003025) ENSHCOG00000003061 NFKB1 (ENSHCOG00000003095) DGKQ (ENSHCOG00000003297) mgat4b (ENSHCOG00000003347) #24 canx (ENSHCOG00000003371) #21 MAML1 (ENSHCOG00000003375) #22 LTC4S (ENSHCOG00000003387) #23 ENSHCOG00000003416 emx3 (ENSHCOG00000000103) b4galt7 (ENSHCOG00000003445) tmed9 (ENSHCOG00000003452) tmem216 (ENSHCOG00000003458) sparc (ENSHCOG00000003466) g3bp1 (ENSHCOG00000003474) glra1 (ENSHCOG00000003488) slc25a48 (ENSHCOG00000003494) cplx2 (ENSHCOG00000003503) thoc3 (ENSHCOG00000003522) ENSHCOG00000003546 gm2a (ENSHCOG00000003555) PCDH12 (ENSHCOG00000003567) Pinecone sodierfish MODERN SPECIES 1 exosc3 (ENSMMDG00005024003) b4galt1l (ENSMMDG00005023999) rest (ENSMMDG00005023996) noa1 (ENSMMDG00005023992) nipsnap3a (ENSMMDG00005023991) ABCA1 (ENSMMDG00005019834) SLC44A1 (ENSMMDG00005019662) TBC1D2 (ENSMMDG00005019658) ELP1 (ENSMMDG00005018839) EBF4 (ENSMMDG00005018746) ENSMMDG00005018699 NFKB1 (ENSMMDG00005018695) DGKQ (ENSMMDG00005018688) mgat4b (ENSMMDG00005018678) #24 canx (ENSMMDG00005016543) #21 MAML1 (ENSMMDG00005016468) #22 LTC4S (ENSMMDG00005016463) #23 ENSMMDG00005016459 PCDH12 (ENSMMDG00005016456) ENSMMDG00005016454 ENSMMDG00005016450 ENSMMDG00005016448 ENSMMDG00005016446 PCDH1 (ENSMMDG00005016445) ENSMMDG00005016442 lect2.1 (ENSMMDG00005016398) F2RL3 (ENSMMDG00005016394) ENSMMDG00005016393 rnf130 (ENSMMDG00005016387) #27 TBC1D9B (ENSMMDG00005015134) #26 ENSMMDG00005015095 Cod MODERN SPECIES 1 ENSGMOG00000005058 exosc3 (ENSGMOG00000005045) b4galt1l (ENSGMOG00000005031) rest (ENSGMOG00000036828) noa1 (ENSGMOG00000004944) nipsnap3a (ENSGMOG00000004934) ENSGMOG00000004829 SLC44A1 (ENSGMOG00000004798) ENSGMOG00000012669 ENSGMOG00000006055 ENSGMOG00000007501 ENSGMOG00000007506 ENSGMOG00000018915 mgat4b (ENSGMOG00000033012) #24 canx (ENSGMOG00000001868) #21 ENSGMOG00000032705 #22 LTC4S (ENSGMOG00000001927) #23 ENSGMOG00000026404 ENSGMOG00000037088 ENSGMOG00000008209 ENSGMOG00000030878 ENSGMOG00000013452 ENSGMOG00000025399 lect2.1 (ENSGMOG00000000097) ENSGMOG00000031285 rnf130 (ENSGMOG00000000091) #27 ENSGMOG00000000082 #26 Protacanthopterygii ANCESTRAL SPECIES 58 ENSGT01050000244965.b ENSGT00940000154518.a ENSGT00940000167634 ENSGT00730000111223 ENSGT00940000164379.e.b ENSGT00940000154194.c.a ENSGT00940000156665.a ENSGT00390000015484.i ENSGT01050000244840.A.b.a ENSGT00940000157465 #27 ENSGT00940000158554 #26 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738.n #23 ENSGT00940000153137.a.b ENSGT00940000160738.m #23 ENSGT00940000160403 ENSGT00550000074940 ENSGT00940000157266.b ENSGT00940000159024 ENSGT00940000167144 ENSGT00950000183135.B.a.b ENSGT00940000166497 ENSGT00940000159651 ENSGT00940000167002.h ENSGT00940000164405 ENSGT00940000165256 ENSGT00940000156842 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 367 ENSGT00940000156665.a.d ENSGT00390000015484.i.n ENSGT01050000244840.A.b.a.f ENSGT00940000157465.o.a #27 ENSGT00940000158554.b #26 ENSGT00390000002781.l #25 ENSGT00940000156526.a.n #24 ENSGT00950000182915.a.a.a.i #21 ENSGT00950000183201.b.b.b.a.e #22 ENSGT00940000160738.m #23 ENSGT00940000160403.d ENSGT00550000074940 ENSGT00940000157266.b.c ENSGT00940000159024.c ENSGT00940000167144.d ENSGT00950000183135.B.a.b.i.a ENSGT00940000166497.b ENSGT00940000159651.e ENSGT00940000167002.g ENSGT00940000164405.i ENSGT00940000165256.d ENSGT00940000156842 ENSGT00990000207836.A ENSGT01030000235110.b Salmoninae_a ANCESTRAL SPECIES 18 ENSGT00940000156627.a.f ENSGT01050000244965.b.c.b ENSGT00940000154518.a.h ENSGT00730000111223.n ENSGT00940000164379.e.b.m.a ENSGT00940000154194.c.a ENSGT00940000156665.a.d ENSGT00940000156038.a.a.d.b.b.a.b ENSGT00390000015484.i.n ENSGT01050000244840.A.b.a.f ENSGT00940000157465.o.a #27 ENSGT00940000158554.b #26 ENSGT00390000002781.l #25 ENSGT00940000156526.a.n #24 ENSGT00950000182915.a.a.a.i #21 ENSGT00950000183201.b.b.b.a.e #22 ENSGT00940000160738.m #23 ENSGT00940000160403.d ENSGT00550000074940 ENSGT00940000157266.b.c ENSGT00940000159024.c ENSGT00940000167144.d ENSGT00950000183135.B.a.b.i.a ENSGT00940000166497.b ENSGT00940000159651.e ENSGT00940000167002.g ENSGT00940000164405.i ENSGT00940000165256.d ENSGT00940000156842 ENSGT00990000207836.A ENSGT01030000235110.b Salmo ANCESTRAL SPECIES 24 ENSGT00940000158366.p ENSGT01050000244965.b.c.b ENSGT00940000154518.a.h ENSGT00730000111223.n ENSGT00940000164379.e.b.m.a ENSGT00940000154194.c.a ENSGT00940000156665.a.d ENSGT00940000156038.a.a.d.b.b.a.b ENSGT00390000015484.i.n ENSGT01050000244840.A.b.a.f ENSGT00940000157465.o.a #27 ENSGT00940000158554.b #26 ENSGT00390000002781.l #25 ENSGT00940000156526.a.n #24 ENSGT00950000182915.a.a.a.i #21 ENSGT00950000183201.b.b.b.a.e #22 ENSGT00940000160738.m #23 ENSGT00940000160403.d ENSGT00550000074940 ENSGT00940000157266.b.c ENSGT00940000159024.c ENSGT00940000167144.d ENSGT00950000183135.B.a.b.i.a ENSGT00940000166497.b ENSGT00940000159651.e ENSGT00940000167002.g ENSGT00940000164405.i ENSGT00940000165256.d ENSGT00940000156842 ENSGT00990000207836.A ENSGT01030000235110.b Atlantic salmon MODERN SPECIES 24 lrit3a (ENSSSAG00000098899) elovl6 (ENSSSAG00000074658) pitx2 (ENSSSAG00000102092) ENSSSAG00000101189 adhx (ENSSSAG00000074737) ENSSSAG00000082752 ENSSSAG00000075996 ENSSSAG00000118276 ENSSSAG00000076003 ENSSSAG00000076013 rnf130 (ENSSSAG00000076016) #27 TBC1D9B (ENSSSAG00000076038) #26 sqstm1 (ENSSSAG00000076115) #25 mgat4b (ENSSSAG00000076123) #24 canx (ENSSSAG00000076158) #21 ENSSSAG00000076182 #22 LTC4S (ENSSSAG00000089536) #23 ENSSSAG00000076189 guf1 (ENSSSAG00000076202) ENSSSAG00000076466 ENSSSAG00000087846 gabra4 (ENSSSAG00000076474) ap1ar (ENSSSAG00000076488) nanos1 (ENSSSAG00000108324) lbx2 (ENSSSAG00000116761) pcgf1 (ENSSSAG00000076508) fgf24 (ENSSSAG00000101433) npm1b (ENSSSAG00000002978) tlx2 (ENSSSAG00000118712) adad1 (ENSSSAG00000003012) ENSSSAG00000003029 River trout MODERN SPECIES 22 pitx2 (ENSSTUG00000034307) gar1 (ENSSTUG00000034345) ENSSTUG00000034362 eif4ea (ENSSTUG00000034607) ENSSTUG00000034624 LINGO2 (ENSSTUG00000034630) ENSSTUG00000034641 ENSSTUG00000034653 F2RL3 (ENSSTUG00000034679) rnf130 (ENSSTUG00000034687) #27 TBC1D9B (ENSSTUG00000034913) #26 ENSSTUG00000039125 sqstm1 (ENSSTUG00000039128) #25 mgat4b (ENSSTUG00000039183) #24 canx (ENSSTUG00000040523) #21 ENSSTUG00000040574 #22 LTC4S (ENSSTUG00000040592) #23 PCDH12 (ENSSTUG00000040613) GUF1 (ENSSTUG00000040706) GABRA2 (ENSSTUG00000042105) gabra4 (ENSSTUG00000042200) ap1ar (ENSSTUG00000042269) nanos1 (ENSSTUG00000042291) lbx2 (ENSSTUG00000042316) pcgf1 (ENSSTUG00000042341) fgf24 (ENSSTUG00000042397) npm1b (ENSSTUG00000042438) tlx2 (ENSSTUG00000042480) adad1 (ENSSTUG00000042504) ENSSTUG00000042528 ENSSTUG00000042553 Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00940000156627.a.f ENSGT01050000244965.b.c.b ENSGT00940000154518.a.h ENSGT00730000111223.n ENSGT00940000164379.e.b.m.a ENSGT00940000154194.c.a ENSGT00940000156665.a.d ENSGT00940000156038.a.a.d.b.b.a.b ENSGT00390000015484.i.n ENSGT01050000244840.A.b.a.f ENSGT00940000157465.o.a #27 ENSGT00940000158554.b #26 ENSGT00390000002781.l #25 ENSGT00940000156526.a.n #24 ENSGT00950000182915.a.a.a.i #21 ENSGT00950000183201.b.b.b.a.e #22 ENSGT00940000176194 ENSGT00940000160403.d ENSGT00550000074940 ENSGT00940000157266.b.c ENSGT00940000159024.c ENSGT00940000167144.d ENSGT00950000183135.B.a.b.i.a ENSGT01100000265271 ENSGT00940000166497.b ENSGT00940000159651.e ENSGT00940000167002.g ENSGT00940000164405.i ENSGT00940000165256.d ENSGT00940000156842 ENSGT00990000207836.A Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00940000156627.a.f ENSGT01050000244965.b.c.b ENSGT00940000154518.a.h ENSGT00730000111223.n ENSGT00940000164379.e.b.m.a ENSGT00940000154194.c.a ENSGT00940000156665.a.d ENSGT00940000156038.a.a.d.b.b.a.b ENSGT00390000015484.i.n ENSGT01050000244840.A.b.a.f ENSGT00940000157465.o.a #27 ENSGT00940000158554.b #26 ENSGT00390000002781.l #25 ENSGT00940000156526.a.n #24 ENSGT00950000182915.a.a.a.i #21 ENSGT00950000183201.b.b.b.a.e #22 ENSGT00940000176194 ENSGT00940000160403.d ENSGT00550000074940 ENSGT00940000157266.b.c ENSGT00940000159024.c ENSGT00940000167144.d ENSGT00950000183135.B.a.b.i.a ENSGT01100000265271 ENSGT00940000166497.b ENSGT00940000159651.e ENSGT00940000167002.g ENSGT00940000164405.i ENSGT00940000165256.d ENSGT00940000156842 ENSGT00990000207836.A Coho salmon MODERN SPECIES 10 lrit3a (ENSOKIG00005006501) ELOVL6 (ENSOKIG00005006494) pitx2 (ENSOKIG00005006469) gar1 (ENSOKIG00005006459) ENSOKIG00005005956 eif4ea (ENSOKIG00005042234) LINGO2 (ENSOKIG00005042223) ENSOKIG00005042152 ENSOKIG00005042073 F2RL3 (ENSOKIG00005042060) rnf130 (ENSOKIG00005041817) #27 TBC1D9B (ENSOKIG00005038477) #26 sqstm1 (ENSOKIG00005038304) #25 mgat4b (ENSOKIG00005036327) #24 canx (ENSOKIG00005036172) #21 MAML1 (ENSOKIG00005036142) #22 ENSOKIG00005036115 PCDH12 (ENSOKIG00005036097) GUF1 (ENSOKIG00005035293) GABRA2 (ENSOKIG00005034571) gabra4 (ENSOKIG00005034531) ap1ar (ENSOKIG00005034520) nanos1 (ENSOKIG00005034503) ENSOKIG00005034487 lbx2 (ENSOKIG00005034476) pcgf1 (ENSOKIG00005034462) npm1b (ENSOKIG00005034412) tlx2 (ENSOKIG00005034385) adad1 (ENSOKIG00005034341) ENSOKIG00005034329 ENSOKIG00005034283 Chinook salmon MODERN SPECIES 13 lrit3a (ENSOTSG00005045680) elovl6 (ENSOTSG00005045678) pitx2 (ENSOTSG00005045677) gar1 (ENSOTSG00005045676) ENSOTSG00005045657 eif4ea (ENSOTSG00005045652) LINGO2 (ENSOTSG00005045651) ENSOTSG00005045650 ENSOTSG00005045649 F2RL3 (ENSOTSG00005045648) rnf130 (ENSOTSG00005045647) #27 TBC1D9B (ENSOTSG00005045553) #26 sqstm1 (ENSOTSG00005045547) #25 mgat4b (ENSOTSG00005045367) #24 canx (ENSOTSG00005045278) #21 MAML1 (ENSOTSG00005045272) #22 ENSOTSG00005045271 PCDH12 (ENSOTSG00005045270) GUF1 (ENSOTSG00005045033) GABRA2 (ENSOTSG00005044770) gabra4 (ENSOTSG00005044768) ap1ar (ENSOTSG00005044767) ENSOTSG00005044765 nanos1 (ENSOTSG00005044764) lbx2 (ENSOTSG00005044763) pcgf1 (ENSOTSG00005044762) fgf24 (ENSOTSG00005044761) npm1b (ENSOTSG00005044760) tlx2 (ENSOTSG00005044759) adad1 (ENSOTSG00005044757) ENSOTSG00005044756 Rainbow trout MODERN SPECIES 5 pitx2 (ENSOMYG00000061049) ENSOMYG00000065623 ENSOMYG00000066294 ENSOMYG00000011968 ENSOMYG00000011377 ENSOMYG00000011286 ENSOMYG00000011269 ENSOMYG00000011228 ENSOMYG00000011205 ENSOMYG00000011201 RNF130 (ENSOMYG00000010945) #27 TBC1D9B (ENSOMYG00000008326) #26 sqstm1 (ENSOMYG00000006893) #25 mgat4b (ENSOMYG00000006797) #24 canx (ENSOMYG00000006488) #21 ENSOMYG00000006057 #22 ENSOMYG00000006037 ENSOMYG00000006023 ENSOMYG00000005528 ENSOMYG00000004777 ENSOMYG00000049825 gabra4 (ENSOMYG00000004656) ap1ar (ENSOMYG00000004627) nanos1 (ENSOMYG00000004577) ENSOMYG00000052017 lbx2 (ENSOMYG00000004564) pcgf1 (ENSOMYG00000004531) fgf24 (ENSOMYG00000004413) npm1b (ENSOMYG00000044750) tlx2 (ENSOMYG00000004195) adad1 (ENSOMYG00000004151) Huchen MODERN SPECIES 513 mgat4b (ENSHHUG00000020073) #24 canx (ENSHHUG00000020209) #21 MAML1 (ENSHHUG00000020263) #22 ENSHHUG00000020265 PCDH12 (ENSHHUG00000020269) GUF1 (ENSHHUG00000020273) GABRA2 (ENSHHUG00000020283) gabra4 (ENSHHUG00000020456) ap1ar (ENSHHUG00000020462) ENSHHUG00000020472 nanos1 (ENSHHUG00000020477) lbx2 (ENSHHUG00000020487) pcgf1 (ENSHHUG00000020490) fgf24 (ENSHHUG00000020497) npm1b (ENSHHUG00000020511) tlx2 (ENSHHUG00000020525) Salmoninae ANCESTRAL SPECIES 34 ENSGT01050000244965.b.c.a ENSGT00940000154518.a.g ENSGT00940000167634 ENSGT00730000111223.m ENSGT00940000164379.e.b.m.b ENSGT00940000154194.c.a ENSGT00940000156665.a.c ENSGT00390000015484.i.m ENSGT01050000244840.A.b.a.e ENSGT00940000157465.o.b #27 ENSGT00940000158554.a #26 ENSGT00390000006124 ENSGT00390000002781.k #25 ENSGT00940000156526.a.m #24 ENSGT00950000182915.a.a.a.j #21 ENSGT00950000183201.b.b.b.a.f #22 ENSGT00940000160738.n #23 ENSGT00940000153137.a.b ENSGT00940000160403.c ENSGT00940000157266.b.d ENSGT00940000159024.d ENSGT00940000167144.c ENSGT00950000183135.B.a.b.i.b ENSGT00940000166497.a ENSGT00940000159651.f ENSGT00940000167002.h ENSGT00940000164405.j ENSGT00940000165256.c ENSGT00990000207836.B ENSGT01030000235110.a ENSGT00940000162309.c Salmoninae_a ANCESTRAL SPECIES 40 ENSGT00940000158366 ENSGT01050000244965.b.c.a ENSGT00940000154518.a.g ENSGT00940000167634 ENSGT00730000111223.m ENSGT00940000164379.e.b.m.b ENSGT00940000156665.a.c ENSGT00390000015484.i.m ENSGT01050000244840.A.b.a.e ENSGT00940000157465.o.b #27 ENSGT00940000158554.a #26 ENSGT00390000006124 ENSGT00390000002781.k #25 ENSGT00940000156526.a.m #24 ENSGT00950000182915.a.a.a.j #21 ENSGT00950000183201.b.b.b.a.f #22 ENSGT00940000160738.n #23 ENSGT00940000153137.a.b ENSGT00940000160403.c ENSGT00940000157266.b.d ENSGT00940000159024.d ENSGT00940000167144.c ENSGT00950000183135.B.a.b.i.b ENSGT00940000166497.a ENSGT00940000159651.f ENSGT00940000167002.h ENSGT00940000164405.j ENSGT00940000165256.c ENSGT00990000207836.B ENSGT01030000235110.a ENSGT00940000162309.c Oncorhynchus ANCESTRAL SPECIES 39 ENSGT00940000158366 ENSGT01050000244965.b.c.a ENSGT00940000154518.a.g ENSGT00940000167634 ENSGT00730000111223.m ENSGT00940000164379.e.b.m.b ENSGT00940000156665.a.c ENSGT00390000015484.i.m ENSGT01050000244840.A.b.a.e ENSGT00940000157465.o.b #27 ENSGT00940000158554.a #26 ENSGT00390000006124 ENSGT00390000002781.k #25 ENSGT00940000156526.a.m #24 ENSGT00950000182915.a.a.a.j #21 ENSGT00950000183201.b.b.b.a.f #22 ENSGT00940000160738.n #23 ENSGT00940000153137.a.b ENSGT00940000160403.c ENSGT00940000157266.b.d ENSGT00940000159024.d ENSGT00940000167144.c ENSGT00950000183135.B.a.b.j ENSGT00940000166497.a ENSGT00940000159651.f ENSGT00940000167002.h ENSGT00940000164405.j ENSGT00940000165256.c ENSGT00990000207836.B ENSGT01030000235110.a ENSGT00940000162309.c Rainbow trout MODERN SPECIES 23 zgc:77938 (ENSOMYG00000061228) ENSOMYG00000050174 ENSOMYG00000055981 ENSOMYG00000035965 ENSOMYG00000076386 ENSOMYG00000045077 lect2 (ENSOMYG00000045057) ENSOMYG00000053921 ENSOMYG00000052242 rnf130 (ENSOMYG00000045010) #27 TBC1D9B (ENSOMYG00000044940) #26 ENSOMYG00000048178 sqstm1 (ENSOMYG00000044911) #25 mgat4b (ENSOMYG00000044895) #24 canx (ENSOMYG00000044873) #21 ENSOMYG00000071499 #22 LTC4S (ENSOMYG00000051938) #23 ENSOMYG00000044862 ENSOMYG00000044858 ENSOMYG00000070618 ENSOMYG00000044811 gabra4 (ENSOMYG00000044782) ap1ar (ENSOMYG00000044772) nanos1 (ENSOMYG00000044766) lbx2 (ENSOMYG00000044763) pcgf1 (ENSOMYG00000044759) npm1b (ENSOMYG00000072502) tlx2 (ENSOMYG00000044744) ENSOMYG00000044739 il2 (ENSOMYG00000044734) IL21B (ENSOMYG00000044729) Oncorhynchus_a ANCESTRAL SPECIES 40 ENSGT00940000158366 ENSGT01050000244965.b.c.a ENSGT00940000162789 ENSGT01050000247341 ENSGT00730000111223.m ENSGT00940000164379.e.b.m.b ENSGT00940000156665.a.c ENSGT00390000015484.i.m ENSGT01050000244840.A.b.a.e ENSGT00940000157465.o.b #27 ENSGT00940000158554.a #26 ENSGT00390000006124 ENSGT00390000002781.k #25 ENSGT00940000156526.a.m #24 ENSGT00950000182915.a.a.a.j #21 ENSGT00950000183201.b.b.b.a.f #22 ENSGT00940000160738.n #23 ENSGT00940000153137.a.b ENSGT00940000160403.c ENSGT00940000157266.b.d ENSGT00940000159024.d ENSGT00940000167144.c ENSGT00950000183135.B.a.b.j ENSGT00940000166497.a ENSGT00940000159651.f ENSGT00940000167002.h ENSGT00940000164405.j ENSGT00940000165256.c ENSGT00990000207836.B ENSGT01030000235110.a ENSGT00940000162309.c Chinook salmon MODERN SPECIES 32 elovl6 (ENSOTSG00005044595) pitx2 (ENSOTSG00005044593) ENSOTSG00005044592 gar1 (ENSOTSG00005044591) ENSOTSG00005044590 LINGO2 (ENSOTSG00005044589) ENSOTSG00005044588 lect2.1 (ENSOTSG00005044586) F2RL3 (ENSOTSG00005044582) rnf130 (ENSOTSG00005044448) #27 TBC1D9B (ENSOTSG00005044202) #26 mrnip (ENSOTSG00005044200) sqstm1 (ENSOTSG00005044199) #25 mgat4b (ENSOTSG00005044114) #24 canx (ENSOTSG00005044108) #21 MAML1 (ENSOTSG00005044106) #22 LTC4S (ENSOTSG00005044104) #23 ENSOTSG00005044103 PCDH12 (ENSOTSG00005044101) GABRA2 (ENSOTSG00005043617) gabra4 (ENSOTSG00005043614) ap1ar (ENSOTSG00005043613) nanos1 (ENSOTSG00005043611) lbx2 (ENSOTSG00005043610) pcgf1 (ENSOTSG00005043607) fgf24 (ENSOTSG00005043602) npm1b (ENSOTSG00005043601) tlx2 (ENSOTSG00005043600) ENSOTSG00005043599 ENSOTSG00005043598 ENSOTSG00005043567 Coho salmon MODERN SPECIES 6 egf (ENSOKIG00005005902) elovl6 (ENSOKIG00005005872) PITX2 (ENSOKIG00005005849) ENSOKIG00005005835 GAR1 (ENSOKIG00005005832) ENSOKIG00005005772 LINGO2 (ENSOKIG00005005755) ENSOKIG00005005714 ENSOKIG00005005707 F2RL3 (ENSOKIG00005005704) rnf130 (ENSOKIG00005005604) #27 TBC1D9B (ENSOKIG00005005449) #26 mrnip (ENSOKIG00005005431) sqstm1 (ENSOKIG00005005419) #25 mgat4b (ENSOKIG00005005139) #24 MAML1 (ENSOKIG00005004965) #22 ENSOKIG00005004900 #23 ENSOKIG00005004877 PCDH12 (ENSOKIG00005004873) GABRA2 (ENSOKIG00005004415) gabra4 (ENSOKIG00005004238) ENSOKIG00005030585 ap1ar (ENSOKIG00005030570) nanos1 (ENSOKIG00005030552) lbx2 (ENSOKIG00005030531) pcgf1 (ENSOKIG00005030402) fgf24 (ENSOKIG00005030326) npm1b (ENSOKIG00005030275) tlx2 (ENSOKIG00005030237) ENSOKIG00005030216 ENSOKIG00005030174 Salmo ANCESTRAL SPECIES 43 ENSGT00940000158366.o ENSGT01050000244965.b.c.a ENSGT00940000154518.a.g ENSGT00940000167634 ENSGT00730000111223.m ENSGT00940000164379.e.b.m.b ENSGT00940000156665.a.c ENSGT00390000015484.i.m ENSGT01050000244840.A.b.a.e ENSGT00940000157465.o.b #27 ENSGT00940000158554.a #26 ENSGT00390000006124 ENSGT00390000002781.k #25 ENSGT00940000156526.a.m #24 ENSGT00950000182915.a.a.a.j #21 ENSGT00950000183201.b.b.b.a.f #22 ENSGT00940000160738.n #23 ENSGT00940000153137.a.b ENSGT00940000160403.c ENSGT00940000157266.b.d ENSGT00940000159024.d ENSGT00940000167144.c ENSGT00950000183135.B.a.b.i.b ENSGT00940000166497.a ENSGT00940000159651.f ENSGT00940000167002.h ENSGT00940000164405.j ENSGT00940000165256.c ENSGT00990000207836.B ENSGT01030000235110.a ENSGT00940000162309.c Atlantic salmon MODERN SPECIES 28 elovl6 (ENSSSAG00000073055) pitx2 (ENSSSAG00000073060) zgc:77938 (ENSSSAG00000073069) ENSSSAG00000073128 ENSSSAG00000073130 ENSSSAG00000083049 ENSSSAG00000073155 ENSSSAG00000073159 ENSSSAG00000115953 ENSSSAG00000104182 rnf130 (ENSSSAG00000073187) #27 sqstm1 (ENSSSAG00000073443) #25 TBC1D9B (ENSSSAG00000073271) #26 mgat4b (ENSSSAG00000118203) #24 canx (ENSSSAG00000073461) #21 ENSSSAG00000107190 #22 LTC4S (ENSSSAG00000100228) #23 ENSSSAG00000106678 ENSSSAG00000073511 ENSSSAG00000073523 gabra4 (ENSSSAG00000107159) ap1ar (ENSSSAG00000073576) nanos1 (ENSSSAG00000073581) lbx2 (ENSSSAG00000117592) pcgf1 (ENSSSAG00000073584) fgf24 (ENSSSAG00000073589) npm1b (ENSSSAG00000087613) tlx2 (ENSSSAG00000073594) ENSSSAG00000118910 ENSSSAG00000073598 ENSSSAG00000073599 River trout MODERN SPECIES 4 elovl6 (ENSSTUG00000026065) pitx2 (ENSSTUG00000026093) adh5l (ENSSTUG00000026137) gar1 (ENSSTUG00000026245) ENSSTUG00000026280 LINGO2 (ENSSTUG00000026423) ENSSTUG00000026428 ENSSTUG00000026447 F2RL3 (ENSSTUG00000026525) rnf130 (ENSSTUG00000026535) #27 TBC1D9B (ENSSTUG00000026593) #26 ENSSTUG00000027088 sqstm1 (ENSSTUG00000027093) #25 mgat4b (ENSSTUG00000027122) #24 canx (ENSSTUG00000027494) #21 MAML1 (ENSSTUG00000027510) #22 LTC4S (ENSSTUG00000027520) #23 ENSSTUG00000027528 PCDH12 (ENSSTUG00000027533) GABRA2 (ENSSTUG00000027559) gabra4 (ENSSTUG00000029107) ap1ar (ENSSTUG00000029120) nanos1 (ENSSTUG00000029148) lbx2 (ENSSTUG00000029158) pcgf1 (ENSSTUG00000029166) fgf24 (ENSSTUG00000029181) npm1b (ENSSTUG00000029216) tlx2 (ENSSTUG00000029226) ENSSTUG00000029240 il21 (ENSSTUG00000029260) ENSSTUG00000029298 Huchen MODERN SPECIES pitx2 (ENSHHUG00000001426) ENSHHUG00000001408 gar1 (ENSHHUG00000001391) ENSHHUG00000001373 ENSHHUG00000001356 ENSHHUG00000001348 LINGO2 (ENSHHUG00000001340) LECT2 (ENSHHUG00000001269) F2RL3 (ENSHHUG00000001265) rnf130 (ENSHHUG00000001258) #27 TBC1D9B (ENSHHUG00000000838) #26 ENSHHUG00000000831 sqstm1 (ENSHHUG00000000816) #25 mgat4b (ENSHHUG00000000790) #24 canx (ENSHHUG00000000657) #21 MAML1 (ENSHHUG00000000656) #22 LTC4S (ENSHHUG00000000654) #23 ENSHHUG00000000648 PCDH12 (ENSHHUG00000000644) ENSHHUG00000000640 GABRA2 (ENSHHUG00000000583) gabra4 (ENSHHUG00000000544) ap1ar (ENSHHUG00000000527) nanos1 (ENSHHUG00000000503) lbx2 (ENSHHUG00000000497) pcgf1 (ENSHHUG00000000471) fgf24 (ENSHHUG00000000417) npm1b (ENSHHUG00000000404) tlx2 (ENSHHUG00000000354) ENSHHUG00000000318 ENSHHUG00000000301 Northern pike MODERN SPECIES 3 ELOVL6 (ENSELUG00000028127) pitx2 (ENSELUG00000021088) gar1 (ENSELUG00000021108) ENSELUG00000021119 eif4ea (ENSELUG00000021129) LINGO2 (ENSELUG00000021135) ENSELUG00000021375 lect2 (ENSELUG00000030366) F2RL3 (ENSELUG00000021415) rnf130 (ENSELUG00000021452) #27 TBC1D9B (ENSELUG00000021561) #26 ENSELUG00000026382 sqstm1 (ENSELUG00000021590) #25 mgat4b (ENSELUG00000021707) #24 canx (ENSELUG00000021763) #21 MAML1 (ENSELUG00000021776) #22 LTC4S (ENSELUG00000021842) #23 ENSELUG00000021868 PCDH12 (ENSELUG00000021877) GUF1 (ENSELUG00000021933) ENSELUG00000021951 gabra4 (ENSELUG00000021980) ap1ar (ENSELUG00000022014) nanos1 (ENSELUG00000022032) lbx2 (ENSELUG00000022042) pcgf1 (ENSELUG00000022082) fgf24 (ENSELUG00000022094) tlx2 (ENSELUG00000022140) adad1 (ENSELUG00000022167) ENSELUG00000001217 ENSELUG00000022187 Osteoglossiformes ANCESTRAL SPECIES 55 ENSGT00940000155521.a.a ENSGT00390000015484.i ENSGT01050000244840.A.b.a ENSGT00940000157465 #27 ENSGT00940000158554 #26 ENSGT00390000006124 ENSGT00390000002781 #25 ENSGT00940000156526.a #24 ENSGT00950000182915.a.a.a #21 ENSGT00950000183201.b.b.b.a #22 ENSGT00940000160738 #23 ENSGT00940000153137.a.b ENSGT00940000160403 ENSGT00940000155317.a.b ENSGT00390000002137 ENSGT00940000166070 ENSGT00940000158371 ENSGT01060000248588.a.c.a ENSGT01030000235223 ENSGT00940000159910 ENSGT00940000165759 ENSGT00940000164983.d.c.a ENSGT00940000164468.a.b.b ENSGT00940000164468.a.b.a.b ENSGT00940000164468.a.a.b.b.a Asian bonytongue MODERN SPECIES 4 ENSSFOG00015017823 ENSSFOG00015002535 ENSSFOG00015008105 ENSSFOG00015002638 rnasel3 (ENSSFOG00015002656) PCDH1 (ENSSFOG00015002669) ENSSFOG00015002714 lect2.1 (ENSSFOG00015002754) F2RL3 (ENSSFOG00015002782) rnf130 (ENSSFOG00015002791) #27 TBC1D9B (ENSSFOG00015002823) #26 ENSSFOG00015002861 sqstm1 (ENSSFOG00015002854) #25 mgat4b (ENSSFOG00015002873) #24 canx (ENSSFOG00015002970) #21 MAML1 (ENSSFOG00015030618) #22 LTC4S (ENSSFOG00015031429) #23 PCDH12 (ENSSFOG00015003061) ENSSFOG00015003066 bicc2 (ENSSFOG00015003080) SPOCK1 (ENSSFOG00015003145) TRPC7 (ENSSFOG00015005871) ENSSFOG00015003255 DIAPH1 (ENSSFOG00015003268) ENSSFOG00015003457 ENSSFOG00015029790 ENSSFOG00015030442 ENSSFOG00015032778 ENSSFOG00015030767 ENSSFOG00015028728 ENSSFOG00015003634 P. kingsleyae MODERN SPECIES 39 F2RL3 (ENSPKIG00000014856) rnf130 (ENSPKIG00000014920) #27 TBC1D9B (ENSPKIG00000015082) #26 ENSPKIG00000015209 sqstm1 (ENSPKIG00000015230) #25 ENSPKIG00000015251 mgat4b (ENSPKIG00000015283) #24 canx (ENSPKIG00000015357) #21 MAML1 (ENSPKIG00000015388) #22 LTC4S (ENSPKIG00000015412) #23 ENSPKIG00000015426 PCDH12 (ENSPKIG00000015442) ENSPKIG00000015463 ENSPKIG00000015505 bicc2 (ENSPKIG00000015555) SPOCK1 (ENSPKIG00000015769) trpc7a (ENSPKIG00000015843) ENSPKIG00000015862 DIAPH1 (ENSPKIG00000015916) ENSPKIG00000016033 ENSPKIG00000016109 ENSPKIG00000016154 ENSPKIG00000016230 ENSPKIG00000016245 Spotted gar MODERN SPECIES 672 NEUROG1 (ENSLOCG00000011560) ENSLOCG00000011550 ARAP3 (ENSLOCG00000011534) ENSLOCG00000011527 tgfbi (ENSLOCG00000011520) smad5 (ENSLOCG00000011514) PCDH1 (ENSLOCG00000011506) lect2.1 (ENSLOCG00000011500) F2RL3 (ENSLOCG00000011493) rnf130 (ENSLOCG00000011483) #27 TBC1D9B (ENSLOCG00000011473) #26 ENSLOCG00000011470 sqstm1 (ENSLOCG00000011462) #25 mgat4b (ENSLOCG00000011450) #24 canx (ENSLOCG00000011437) #21 MAML1 (ENSLOCG00000011427) #22 LTC4S (ENSLOCG00000011416) #23 PCDH12 (ENSLOCG00000011407) ENSLOCG00000011398 ENSLOCG00000011390 ENSLOCG00000011380 bicc2 (ENSLOCG00000011365) SPOCK1 (ENSLOCG00000011355) TRPC7 (ENSLOCG00000011343) DIAPH1 (ENSLOCG00000011329) pcdh1g32 (ENSLOCG00000011316) ENSLOCG00000011309 ENSLOCG00000018309 ENSLOCG00000011299 ENSLOCG00000011292 ENSLOCG00000011280 Reedfish MODERN SPECIES 2 spdl1 (ENSECRG00000009440) hnrnpa0b (ENSECRG00000009472) ENSECRG00000009479 KLHL3 (ENSECRG00000009502) ENSECRG00000009567 FAM13B (ENSECRG00000009581) cxcl14 (ENSECRG00000009596) slit3 (ENSECRG00000009684) ENSECRG00000009954 ENSECRG00000009962 ENSECRG00000009976 ENSECRG00000009988 sqstm1 (ENSECRG00000009997) #25 mgat4b (ENSECRG00000010015) #24 canx (ENSECRG00000010037) #21 MAML1 (ENSECRG00000010061) #22 LTC4S (ENSECRG00000010071) #23 PCDH12 (ENSECRG00000010080) ENSECRG00000010113 ENSECRG00000010216 SPOCK1 (ENSECRG00000010233) trpc7a (ENSECRG00000010285) ENSECRG00000010334 DIAPH1 (ENSECRG00000010465) ENSECRG00000010953 ENSECRG00000010970 ENSECRG00000010983 ENSECRG00000010986 pcdh1g31 (ENSECRG00000010990) ENSECRG00000011005 ENSECRG00000011019 Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES ENSGT00950000183201.b.b.b.b.a ##22 Elephant shark MODERN SPECIES 1542 gab1 (ENSCMIG00000019463) USP38 (ENSCMIG00000019468) INPP4B (ENSCMIG00000019484) ENSCMIG00000019498 ENSCMIG00000019500 znf330 (ENSCMIG00000019502) rnf150a (ENSCMIG00000019503) TBC1D9 (ENSCMIG00000019541) ucp1 (ENSCMIG00000019678) elmod2 (ENSCMIG00000019679) ENSCMIG00000019683 ##24 clgn (ENSCMIG00000019687) ##21 SCOC (ENSCMIG00000019712) ENSCMIG00000019716 ##22 ENSCMIG00000019717 ENSCMIG00000019719 mgst2 (ENSCMIG00000019720) setd7 (ENSCMIG00000019722) zgc:113425 (ENSCMIG00000019723) ENSCMIG00000019724 rab33ba (ENSCMIG00000019725) mlsl (ENSCMIG00000019728) naa15b (ENSCMIG00000019736) ENSCMIG00000000194 ENSCMIG00000000244 elf2b (ENSCMIG00000000255) NOCT (ENSCMIG00000000263) SLC7A11 (ENSCMIG00000000285) pcdh18b (ENSCMIG00000000330) Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES ENSGT00950000183201.b.b.b.b.b.a ##22 Elephant shark MODERN SPECIES 1689 ENSCMIG00000006287 nipal4 (ENSCMIG00000006294) cyfip2 (ENSCMIG00000006312) itk (ENSCMIG00000006386) hdac3 (ENSCMIG00000006492) ENSCMIG00000006544 ENSCMIG00000006547 ENSCMIG00000006549 flt4 (ENSCMIG00000006584) #33 rnf130 (ENSCMIG00000006663) #27 TBC1D9B (ENSCMIG00000006719) #26 ENSCMIG00000006822 sqstm1 (ENSCMIG00000006829) #25 mgat4b (ENSCMIG00000006831) #24 ENSCMIG00000006849 MAML1 (ENSCMIG00000006885) ##22 ENSCMIG00000006886 #23 ENSCMIG00000006888 ENSCMIG00000006891 ENSCMIG00000006896 ENSCMIG00000006905 cdx1b (ENSCMIG00000006912) ENSCMIG00000006954 ARSI (ENSCMIG00000007115) ENSCMIG00000007117 rps14 (ENSCMIG00000007120) ndst1a (ENSCMIG00000007139) ENSCMIG00000007168 MYOZ3 (ENSCMIG00000007170) rbm22 (ENSCMIG00000007172) dctn4 (ENSCMIG00000007178) Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES ENSGT00950000183201.b.b.b.b.b.b.a ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183201.b.b.b.b.b.b.a ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00950000183201.b.b.b.b.b.b.a ##22 Reedfish MODERN SPECIES 12 ANKRD42 (ENSECRG00000009350) pcf11 (ENSECRG00000009305) rab30 (ENSECRG00000009291) ENSECRG00000009278 prcp (ENSECRG00000009264) ENSECRG00000009251 ENSECRG00000009239 ENSECRG00000009223 tenm4 (ENSECRG00000009196) nars2 (ENSECRG00000009162) GAB2 (ENSECRG00000009126) USP35 (ENSECRG00000009091) POLQ (ENSECRG00000008961) ENSECRG00000008884 ##22 ENSECRG00000008877 ENSECRG00000008867 ##22 ENSECRG00000008828 birc2 (ENSECRG00000008754) ENSECRG00000008725 ENSECRG00000008722 yap1 (ENSECRG00000008693) cfap300 (ENSECRG00000008664) ENSECRG00000008652 ANGPTL5 (ENSECRG00000008638) trpc6a (ENSECRG00000008591) pgr (ENSECRG00000008552) arhgap42a (ENSECRG00000008529) ENSECRG00000008511 cntn5 (ENSECRG00000008426) ENSECRG00000008360 fbxo40.1 (ENSECRG00000008353) Neopterygii ANCESTRAL SPECIES ENSGT00950000183201.b.b.b.b.b.b.a ##22 Spotted gar MODERN SPECIES 669 alg8 (ENSLOCG00000005958) KCTD21 (ENSLOCG00000018199) ccdc90b (ENSLOCG00000005941) ANKRD42 (ENSLOCG00000005924) pcf11 (ENSLOCG00000005901) rab30 (ENSLOCG00000005884) ENSLOCG00000005869 prcp (ENSLOCG00000005836) FAM181B (ENSLOCG00000018197) cmah (ENSLOCG00000005814) tenm4 (ENSLOCG00000005799) nars2 (ENSLOCG00000005772) GAB2 (ENSLOCG00000005755) USP35 (ENSLOCG00000005724) POLQ (ENSLOCG00000005709) ENSLOCG00000005696 ##22 birc2 (ENSLOCG00000005681) yap1 (ENSLOCG00000005660) cfap300 (ENSLOCG00000005645) ENSLOCG00000005619 ANGPTL5 (ENSLOCG00000005594) trpc6a (ENSLOCG00000005553) pgr (ENSLOCG00000005538) arhgap42a (ENSLOCG00000005493) cntn5 (ENSLOCG00000005476) fbxo40.1 (ENSLOCG00000005461) dlg2 (ENSLOCG00000005438) ENSLOCG00000005399 tmem126a (ENSLOCG00000005364) ENSLOCG00000005355 ENSLOCG00000005338 Elephant shark MODERN SPECIES 1489 DIPK2B (ENSCMIG00000012038) ccdc80 (ENSCMIG00000012040) slc35a5 (ENSCMIG00000012043) atg3 (ENSCMIG00000012052) ENSCMIG00000012057 SLC19A2 (ENSCMIG00000012061) gpr161b (ENSCMIG00000012062) dcaf6 (ENSCMIG00000012105) mpc2 (ENSCMIG00000012153) trpc6a (ENSCMIG00000012160) ENSCMIG00000012164 PGR (ENSCMIG00000012168) arhgap42a (ENSCMIG00000012195) khk (ENSCMIG00000012250) ENSCMIG00000012268 ENSCMIG00000012274 ##22 ENSCMIG00000012277 ##22 MTMR2 (ENSCMIG00000012331) CEP57 (ENSCMIG00000012446) fam76b (ENSCMIG00000012450) ENSCMIG00000012461 cwc15 (ENSCMIG00000012465) AMOTL1 (ENSCMIG00000012476) PIWIL4 (ENSCMIG00000012588) FUT4 (ENSCMIG00000012765) ankrd49 (ENSCMIG00000012766) mre11a (ENSCMIG00000012782) GPR83 (ENSCMIG00000012971) panx1a (ENSCMIG00000012981) HEPH (ENSCMIG00000013106) ENSCMIG00000013435 Gnathostomata ANCESTRAL SPECIES 14 ENSGT00940000159713 ENSGT00940000155492 ENSGT00950000183201.b.b.b.b.b.b.b ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.D ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153259.a.a.a ENSGT00940000155516 ENSGT00940000160157 ENSGT00940000153972.A Euteleostomi ANCESTRAL SPECIES 34 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00950000183201.b.b.b.b.b.b.b ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.D ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000153972.A ENSGT01100000263551.b.a ENSGT00390000011810 ENSGT00940000153123.A ENSGT00390000015987 Sarcopterygii ANCESTRAL SPECIES 52 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00950000183201.b.b.b.b.b.b.b ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.D ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000153972.A ENSGT01100000263551.b.a.b ENSGT00390000011810 ENSGT00940000153123.A ENSGT00390000015987 Coelacanth MODERN SPECIES 850 ENSLACG00000002975 ##22 MTMR2 (ENSLACG00000006349) CEP57 (ENSLACG00000007776) FAM76B (ENSLACG00000008459) ENSLACG00000011414 CWC15 (ENSLACG00000012239) AMOTL1 (ENSLACG00000013131) Elephant shark MODERN SPECIES 1489 ccdc80 (ENSCMIG00000012040) slc35a5 (ENSCMIG00000012043) atg3 (ENSCMIG00000012052) ENSCMIG00000012057 SLC19A2 (ENSCMIG00000012061) gpr161b (ENSCMIG00000012062) dcaf6 (ENSCMIG00000012105) mpc2 (ENSCMIG00000012153) trpc6a (ENSCMIG00000012160) ENSCMIG00000012164 PGR (ENSCMIG00000012168) arhgap42a (ENSCMIG00000012195) khk (ENSCMIG00000012250) ENSCMIG00000012268 ENSCMIG00000012274 ##22 ENSCMIG00000012277 ##22 MTMR2 (ENSCMIG00000012331) CEP57 (ENSCMIG00000012446) fam76b (ENSCMIG00000012450) ENSCMIG00000012461 cwc15 (ENSCMIG00000012465) AMOTL1 (ENSCMIG00000012476) PIWIL4 (ENSCMIG00000012588) FUT4 (ENSCMIG00000012765) ankrd49 (ENSCMIG00000012766) mre11a (ENSCMIG00000012782) GPR83 (ENSCMIG00000012971) panx1a (ENSCMIG00000012981) HEPH (ENSCMIG00000013106) ENSCMIG00000013435 ENSCMIG00000013439 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183201.b.b.a ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183201.b.b.a ##22 Actinopterygii ANCESTRAL SPECIES 5 ENSGT00940000155453 ENSGT00940000154216.a ENSGT00440000034259.b ENSGT00940000156875 ENSGT00940000166008 ENSGT00940000165087 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00940000160942 ENSGT00940000158694 ENSGT00910000148102 ENSGT00950000183201.b.b.a ##22 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00950000183204.a ENSGT00940000155156.b ENSGT01030000234954 ENSGT00520000055616.a ENSGT00390000016589 Reedfish MODERN SPECIES 12 KCTD21 (ENSECRG00000009393) ccdc90b (ENSECRG00000009384) ANKRD42 (ENSECRG00000009350) pcf11 (ENSECRG00000009305) rab30 (ENSECRG00000009291) ENSECRG00000009278 prcp (ENSECRG00000009264) ENSECRG00000009251 ENSECRG00000009239 ENSECRG00000009223 tenm4 (ENSECRG00000009196) nars2 (ENSECRG00000009162) GAB2 (ENSECRG00000009126) USP35 (ENSECRG00000009091) POLQ (ENSECRG00000008961) ENSECRG00000008884 ##22 ENSECRG00000008877 ENSECRG00000008867 ##22 ENSECRG00000008828 birc2 (ENSECRG00000008754) ENSECRG00000008725 ENSECRG00000008722 yap1 (ENSECRG00000008693) cfap300 (ENSECRG00000008664) ENSECRG00000008652 ANGPTL5 (ENSECRG00000008638) trpc6a (ENSECRG00000008591) pgr (ENSECRG00000008552) arhgap42a (ENSECRG00000008529) ENSECRG00000008511 cntn5 (ENSECRG00000008426) Neopterygii ANCESTRAL SPECIES 54 ENSGT00940000155453 ENSGT00940000154216.a ENSGT00440000034259.b ENSGT00940000156875 ENSGT00940000166008 ENSGT00940000165087 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00940000160942 ENSGT00940000158694 ENSGT00910000148102 ENSGT00950000183201.b.b.a ##22 ENSGT00940000154175 ENSGT00510000046760.a.bb ENSGT00510000047559 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00950000183204.a ENSGT00940000155156.b ENSGT01030000234954 ENSGT00520000055616.a ENSGT00390000016589 Osteoglossocephalai ANCESTRAL SPECIES 110 ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000153733.A ENSGT00940000155453 ENSGT00940000154216.a ENSGT00440000034259.b ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 Osteoglossiformes ANCESTRAL SPECIES 121 ENSGT00940000170083 ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00940000163088 ENSGT00940000157114.d ENSGT00940000159682 ENSGT00530000063252.a.a.a ENSGT00940000164481.b.b Asian bonytongue MODERN SPECIES 1 ENSSFOG00015033169 ENSSFOG00015025655 FNDC3A (ENSSFOG00015023430) ENSSFOG00015023421 ENSSFOG00015032143 ENSSFOG00015029696 guca1c (ENSSFOG00015023410) thrsp (ENSSFOG00015023402) prcp (ENSSFOG00015023394) ENSSFOG00015023388 FAM181B (ENSSFOG00015027083) tenm4 (ENSSFOG00015023372) ENSSFOG00015027381 GAB2 (ENSSFOG00015023361) ENSSFOG00015023342 ENSSFOG00015023340 ##22 yap1 (ENSSFOG00015028354) pgr (ENSSFOG00015023314) ARHGAP42 (ENSSFOG00015023294) cntn5 (ENSSFOG00015023269) FBXO40 (ENSSFOG00015023259) NECTIN1 (ENSSFOG00015023252) TREH (ENSSFOG00015023224) DDX6 (ENSSFOG00015025899) bcl9l (ENSSFOG00015023200) cdon (ENSSFOG00015023187) prdm10 (ENSSFOG00015023130) APLP2 (ENSSFOG00015023108) ENSSFOG00015023099 dhx34 (ENSSFOG00015023082) spred3 (ENSSFOG00015027124) P. kingsleyae MODERN SPECIES 84 ENSPKIG00000015021 ENSPKIG00000014998 ENSPKIG00000014987 tenm4 (ENSPKIG00000014548) GAB2 (ENSPKIG00000014325) ENSPKIG00000014288 ##22 yap1 (ENSPKIG00000014259) pgr (ENSPKIG00000014228) ENSPKIG00000014208 ENSPKIG00000014187 cntn5 (ENSPKIG00000013991) FBXO40 (ENSPKIG00000013914) NECTIN1 (ENSPKIG00000013887) ENSPKIG00000013869 ENSPKIG00000013852 TREH (ENSPKIG00000013790) DDX6 (ENSPKIG00000013728) bcl9l (ENSPKIG00000013683) cdon (ENSPKIG00000013654) ENSPKIG00000013629 prdm10 (ENSPKIG00000013587) Clupeocephala ANCESTRAL SPECIES 9 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000170083 ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT00990000210146 ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 Otomorpha ANCESTRAL SPECIES 2 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00990000205057 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT00990000210146 ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT01060000248589.B ENSGT01060000248589.A ENSGT01060000248592.C ENSGT01030000234590.A.a.a ENSGT00940000153680.a ENSGT00940000158551 ENSGT00940000156921 ENSGT00940000161467 ENSGT01030000234579.A.b.a ENSGT00940000157909 ENSGT00390000012719.a.a.a ENSGT00940000155414 ENSGT00390000006450 Clupeiformes ANCESTRAL SPECIES 718 ENSGT00390000006762.c ENSGT00950000183201.b.b.a ##22 ENSGT00940000162644 Denticle herring MODERN SPECIES 4 ENSDCDG00000029794 ENSDCDG00000029793 nlk2 (ENSDCDG00000029571) lyrm9 (ENSDCDG00000029528) nos2a (ENSDCDG00000026754) msi2b (ENSDCDG00000026268) akap1b (ENSDCDG00000026068) ENSDCDG00000026058 ENSDCDG00000026057 NF1 (ENSDCDG00000020328) lgals9l3 (ENSDCDG00000019661) KSR1 (ENSDCDG00000019631) wsb1 (ENSDCDG00000019620) cuedc1b (ENSDCDG00000019616) ENSDCDG00000019612 ENSDCDG00000019605 ##22 MINDY4B (ENSDCDG00000019600) clrn1 (ENSDCDG00000019596) ENSDCDG00000019530 mfsd14a1 (ENSDCDG00000019306) sass6 (ENSDCDG00000018471) trmt13 (ENSDCDG00000018422) lrrc39 (ENSDCDG00000018418) dbt (ENSDCDG00000018335) rtca (ENSDCDG00000018269) cdc14ab (ENSDCDG00000018237) GPR88 (ENSDCDG00000018225) vcam1b (ENSDCDG00000018224) slc30a7 (ENSDCDG00000018223) dph5 (ENSDCDG00000018220) s1pr1 (ENSDCDG00000018219) Atlantic herring MODERN SPECIES 25 ENSCHAG00000014069 ENSCHAG00000004555 SLITRK3 (ENSCHAG00000004141) ENSCHAG00000004117 ENSCHAG00000004109 ENSCHAG00000004101 ENSCHAG00000004063 fam168a (ENSCHAG00000004019) P2RY6 (ENSCHAG00000004003) ARHGEF17 (ENSCHAG00000003565) relt (ENSCHAG00000003472) P2RY2 (ENSCHAG00000003451) FCHSD2 (ENSCHAG00000001158) ENSCHAG00000000302 cuedc1b (ENSCHAG00000027778) ENSCHAG00000027777 ##22 MINDY4B (ENSCHAG00000027776) LGALS4 (ENSCHAG00000027774) ryr1b (ENSCHAG00000027560) rasgrp4 (ENSCHAG00000027444) opa3 (ENSCHAG00000027439) ppp1r13l (ENSCHAG00000027438) TMEM91 (ENSCHAG00000027435) exosc5 (ENSCHAG00000027431) bckdha (ENSCHAG00000027422) ENSCHAG00000027417 cfap45 (ENSCHAG00000027404) tbrg1 (ENSCHAG00000027392) siae (ENSCHAG00000027385) tada2a (ENSCHAG00000027311) dusp14 (ENSCHAG00000027289) Otophysi ANCESTRAL SPECIES 69 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00990000205057 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT00990000210146 ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT01060000248589.B ENSGT01060000248589.A ENSGT01060000248592.C ENSGT01030000234590.A.a.a ENSGT00940000153680.a ENSGT00940000158551 ENSGT00940000156921 ENSGT00940000161467 ENSGT01030000234579.A.b.a ENSGT00940000157909 ENSGT00390000012719.a.a.a ENSGT00940000155414 ENSGT00390000006450 Characiphysae ANCESTRAL SPECIES 39 ENSGT00940000158925 ENSGT01100000263536.B.c.a.a ENSGT00940000159319 ENSGT00940000153997.b.a.b.c.a ENSGT00990000205057 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT01060000248589.B ENSGT01060000248589.A ENSGT01060000248592.C ENSGT01030000234590.A.a.a ENSGT00940000153680.a ENSGT00940000158551 ENSGT00390000003014 ENSGT00940000163520.B ENSGT00940000163520.A.b.c ENSGT00940000162978.a.b ENSGT00940000162775 ENSGT00940000154525.b.b ENSGT00940000165141.a Channel catfish MODERN SPECIES 8 FNDC3A (ENSIPUG00000021075) zgc:153184 (ENSIPUG00000021065) ENSIPUG00000021056 guca1c (ENSIPUG00000021049) thrsp (ENSIPUG00000021040) ndufc2 (ENSIPUG00000021028) Rab30 (ENSIPUG00000021010) PRCP (ENSIPUG00000020979) FAM181B (ENSIPUG00000020971) ENSIPUG00000020962 ENSIPUG00000020955 tenm4 (ENSIPUG00000020918) ENSIPUG00000020911 nars2 (ENSIPUG00000020892) gab2 (ENSIPUG00000020867) maml2 (ENSIPUG00000020854) ##22 MINDY4B (ENSIPUG00000020838) clrn1 (ENSIPUG00000020827) gpr171 (ENSIPUG00000020826) ENSIPUG00000020824 P2RY14 (ENSIPUG00000020821) ENSIPUG00000020816 rnf168 (ENSIPUG00000020806) ano7 (ENSIPUG00000020790) ENSIPUG00000020773 ENSIPUG00000020763 cbln20 (ENSIPUG00000020759) ENSIPUG00000020753 nudt8 (ENSIPUG00000020748) mfrp (ENSIPUG00000020742) si:ch1073-280e3.1 (ENSIPUG00000020593) Characiphysae_b ANCESTRAL SPECIES 38 ENSGT00990000203619.B.a.a ENSGT01100000263536.B.c.a.a ENSGT00940000159319 ENSGT00940000153997.b.a.b.c.a ENSGT00990000205057 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT01060000248589.B ENSGT01060000248589.A ENSGT01060000248592.C ENSGT01030000234590.A.a.a ENSGT00940000153680.a ENSGT00940000158551 ENSGT00390000003014 ENSGT00940000163520.B ENSGT00940000163520.A.b.c ENSGT00940000162978.a.b ENSGT00940000162775 ENSGT00940000154525.b.b ENSGT00940000165141.a Characoidei ANCESTRAL SPECIES 53 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00990000203619.B.a.a ENSGT00940000159319 ENSGT00940000153997.b.a.b.c.a ENSGT00990000205057 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT01060000248589.B ENSGT01060000248589.A ENSGT01060000248592.C ENSGT01030000234590.A.a.a ENSGT00940000153680.a ENSGT00940000158551 ENSGT00390000003014 ENSGT00940000163520.B ENSGT00940000163520.A.b.c ENSGT00940000162978.a.b ENSGT00940000162775 ENSGT00940000154525.b.b ENSGT00940000165141.a Red-bellied piranha MODERN SPECIES 46 lpar6a (ENSPNAG00000010439) RCBTB2 (ENSPNAG00000010481) ENSPNAG00000010492 FNDC3A (ENSPNAG00000010642) zgc:153184 (ENSPNAG00000010675) ENSPNAG00000010688 guca1c (ENSPNAG00000010706) thrsp (ENSPNAG00000010711) ndufc2 (ENSPNAG00000010736) rab30 (ENSPNAG00000010760) prcp (ENSPNAG00000010794) FAM181B (ENSPNAG00000010800) tenm4 (ENSPNAG00000011147) nars2 (ENSPNAG00000011197) GAB2 (ENSPNAG00000001609) ENSPNAG00000001618 ##22 MINDY4B (ENSPNAG00000001628) clrn1 (ENSPNAG00000001634) GPR171 (ENSPNAG00000011254) ENSPNAG00000011264 P2RY14 (ENSPNAG00000011268) ENSPNAG00000011284 rnf168 (ENSPNAG00000011291) ANO7 (ENSPNAG00000011333) ENSPNAG00000001687 ENSPNAG00000001692 cbln20 (ENSPNAG00000011358) ENSPNAG00000011380 nudt8 (ENSPNAG00000011387) MFRP (ENSPNAG00000011393) ENSPNAG00000001744 Mexicana tetra MODERN SPECIES 11 ENSAMXG00000031359 ENSAMXG00000030387 ENSAMXG00000005523 GAK (ENSAMXG00000032746) gpr184 (ENSAMXG00000025892) ENSAMXG00000025891 ENSAMXG00000040163 ENSAMXG00000037324 ENSAMXG00000033816 DSCAML1 (ENSAMXG00000007856) ENSAMXG00000038396 ENSAMXG00000038852 tenm4 (ENSAMXG00000010000) nars2 (ENSAMXG00000010086) GAB2 (ENSAMXG00000010088) ENSAMXG00000010093 ##22 MINDY4B (ENSAMXG00000010100) clrn1 (ENSAMXG00000036898) GPR171 (ENSAMXG00000025567) ENSAMXG00000010118 P2RY14 (ENSAMXG00000025569) ENSAMXG00000044031 rnf168 (ENSAMXG00000010126) ANO7 (ENSAMXG00000010138) ENSAMXG00000034829 ENSAMXG00000041838 cbln20 (ENSAMXG00000010161) ENSAMXG00000041895 nudt8 (ENSAMXG00000035176) psmd11b (ENSAMXG00000029910) MFRP (ENSAMXG00000010190) Electric eel DUPLICATION Electric eel MODERN SPECIES 647 tenm4 (ENSEEEG00000020618) nars2 (ENSEEEG00000020621) GAB2 (ENSEEEG00000020625) ENSEEEG00000020627 ##22 ENSEEEG00000020628 ##22 clrn1 (ENSEEEG00000020630) Electric eel MODERN SPECIES 647 tenm4 (ENSEEEG00000020618) nars2 (ENSEEEG00000020621) GAB2 (ENSEEEG00000020625) ENSEEEG00000020627 ##22 ENSEEEG00000020628 ##22 clrn1 (ENSEEEG00000020630) Cyprinoidei ANCESTRAL SPECIES 141 ENSGT00950000183201.b.b.a ##22 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT01060000248589.B ENSGT01060000248589.A.a.a ENSGT01060000248589.A.a.b ENSGT01060000248592.C ENSGT01060000248589.A.b ENSGT01030000234590.A.a.a ENSGT00940000153680.a ENSGT00940000158551 ENSGT00940000156921 ENSGT01030000234579.A.b.a ENSGT00940000157909 ENSGT00390000012719.a.a.a ENSGT00940000155414 Zebrafish MODERN SPECIES 6 FNDC3A (ENSDARG00000105503) SLITRK5 (ENSDARG00000103359) RCBTB2 (ENSDARG00000090687) ENSDARG00000074984 stoml3a (ENSDARG00000079914) ENSDARG00000113542 slc25a15a (ENSDARG00000063539) foxo1a (ENSDARG00000099555) cog6 (ENSDARG00000103149) ENSDARG00000115101 lpar6a (ENSDARG00000062552) ENSDARG00000058869 RNF14 (ENSDARG00000078683) RNF14 (ENSDARG00000104631) ENSDARG00000091727 ENSDARG00000112977 ##22 MINDY4B (ENSDARG00000112337) clrn1 (ENSDARG00000102890) GPR171 (ENSDARG00000105008) ENSDARG00000099495 ENSDARG00000104648 ENSDARG00000117109 P2RY14 (ENSDARG00000103305) ENSDARG00000116123 ENSDARG00000100595 ENSDARG00000100378 rnf168 (ENSDARG00000112483) ANO7 (ENSDARG00000104834) ece2b (ENSDARG00000102142) atp1b3b (ENSDARG00000042837) tfdp2 (ENSDARG00000042835) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 712 ENSGT00940000165761.a.a ENSGT00940000158785.s ENSGT00940000160457.b.a ENSGT00940000159132.b.a ENSGT00950000183201.b.b.a.c.a ##22 ENSGT00940000162644.d ENSGT00850000132319.a.a.a.e ENSGT01060000248589.B.f ENSGT01030000234518.C.b.c ENSGT01060000248589.A.a.b.a ENSGT01060000248592.C.a ENSGT01060000248589.A.b.b Goldfish MODERN SPECIES 6 or62c2 (ENSCARG00000003558) ENSCARG00000003563 ENSCARG00000003566 ENSCARG00000003571 ENSCARG00000003577 ENSCARG00000003580 ENSCARG00000003590 ENSCARG00000003595 ENSCARG00000003599 ppp5c (ENSCARG00000003618) tgfb1a (ENSCARG00000003682) ENSCARG00000003697 ENSCARG00000003708 ENSCARG00000003738 ENSCARG00000003740 ENSCARG00000003753 ##22 MINDY4B (ENSCARG00000003763) clrn1 (ENSCARG00000003772) GPR171 (ENSCARG00000003774) ENSCARG00000003776 ENSCARG00000003782 ENSCARG00000003786 ENSCARG00000003789 ENSCARG00000003797 P2RY14 (ENSCARG00000003804) ENSCARG00000003811 cldna (ENSCARG00000003818) ENSCARG00000003831 cldnf (ENSCARG00000003843) cldne (ENSCARG00000003846) cldnj (ENSCARG00000003850) Cyprininae_a ANCESTRAL SPECIES 573 ENSGT00940000162700.e.a.a.a.a.a.b.a.b.b.a.a ENSGT00940000165761.a.a ENSGT00940000158785.s ENSGT00940000160457.b.a ENSGT00940000159132.b.a ENSGT00950000183201.b.b.a.c.a ##22 ENSGT00940000162644.d ENSGT00850000132319.a.a.a.e.a ENSGT01060000248589.B.f ENSGT01030000234518.C.b.c ENSGT01060000248589.A.b.b Common carp reference MODERN SPECIES 26 porb (ENSCCRG00000004902) taf15 (ENSCCRG00000061364) ENSCCRG00000020886 cul3b (ENSCCRG00000039253) ENSCCRG00000008434 ENSCCRG00000038529 ENSCCRG00000031560 cldnf (ENSCCRG00000058346) ENSCCRG00000072783 ENSCCRG00000064346 ENSCCRG00000003268 ppp5c (ENSCCRG00000054686) tgfb1a (ENSCCRG00000020880) ENSCCRG00000020867 ENSCCRG00000076670 ENSCCRG00000039335 ##22 MINDY4B (ENSCCRG00000039328) clrn1 (ENSCCRG00000057774) GPR171 (ENSCCRG00000078036) ENSCCRG00000029748 ENSCCRG00000053581 ENSCCRG00000063802 ENSCCRG00000059084 ENSCCRG00000074203 ENSCCRG00000055202 ENSCCRG00000032249 ENSCCRG00000066305 ENSCCRG00000077953 P2RY14 (ENSCCRG00000063096) ENSCCRG00000054120 ENSCCRG00000072106 Golden-line barbel MODERN SPECIES 521 ENSSGRG00000032915 ##22 clrn1 (ENSSGRG00000032916) GPR171 (ENSSGRG00000032917) ENSSGRG00000032918 P2RY14 (ENSSGRG00000032919) GRM7 (ENSSGRG00000032922) ##15 Cyprininae ANCESTRAL SPECIES 357 ENSGT00940000165704.a.b.c.b ENSGT00940000164025.a.a ENSGT00940000154762.a.b.a.a.a.a.a ENSGT00940000163648.a.a.a.b.a ENSGT01090000260029.a.b.b.b.a.a.a.a.b.a.b.a.b.a.b ENSGT00940000165067.b ENSGT00940000154762.a.b.a.b.b.e ENSGT00940000165704.a.b.c.a ENSGT00940000154762.a.b.a.a.a.a.b ENSGT00940000154762.a.a ENSGT00940000163648.a.a.a.b.b ENSGT00940000165761.a.b ENSGT00940000158785.t ENSGT00940000160457.b.b ENSGT00940000159132.b.b ENSGT00950000183201.b.b.a.c.b ##22 ENSGT00940000162644.c ENSGT00850000132319.a.a.a.f ENSGT01060000248589.B.e ENSGT01060000248589.A.a.a.a ENSGT01060000248589.A.a.b.b ENSGT01060000248592.C.b ENSGT01060000248589.A.b.a ENSGT01030000234590.A.a.a.e ENSGT00940000153680.a.yb ENSGT00940000158551.i ENSGT00940000156921.c ENSGT01030000234579.A.b.a.b ENSGT00940000157909.m.b Goldfish MODERN SPECIES 34 ENSCARG00000043651 MMP28 (ENSCARG00000043631) cul3b (ENSCARG00000043166) cldnj (ENSCARG00000043119) ENSCARG00000043110 cldnf (ENSCARG00000043101) cldna (ENSCARG00000043090) ENSCARG00000043071 ENSCARG00000043066 ENSCARG00000043056 ENSCARG00000043045 ppp5c (ENSCARG00000041458) tgfb1a (ENSCARG00000041319) ENSCARG00000041233 MINDY4B (ENSCARG00000041180) ENSCARG00000041141 ##22 clrn1 (ENSCARG00000041113) GPR171 (ENSCARG00000041104) ENSCARG00000041097 P2RY14 (ENSCARG00000041092) ENSCARG00000041083 ENSCARG00000041069 rnf168 (ENSCARG00000041005) ENSCARG00000040240 ece2b (ENSCARG00000039574) atp1b3b (ENSCARG00000039514) tfdp2 (ENSCARG00000039439) Cyprininae_a ANCESTRAL SPECIES 411 ENSGT00940000155066.e.a.a.f ENSGT00940000165430 ENSGT00390000007499.b ENSGT00940000165067.a ENSGT00940000154762.a.b.a.b.b.e ENSGT00940000165704.a.b.c.a ENSGT00940000164025.a.a ENSGT00940000165704.b.f ENSGT00940000154762.a.b.a.a.a.a.b ENSGT00940000154762.a.a ENSGT00940000163648.a.a.a.b.b ENSGT00940000165761.a.b ENSGT00940000158785.t ENSGT00940000160457.b.b ENSGT00940000159132.b.b ENSGT00950000183201.b.b.a.c.b ##22 ENSGT00940000162644.c ENSGT01060000248589.B.e ENSGT01060000248589.A.a.a.a ENSGT01060000248592.C.a Common carp reference MODERN SPECIES 39 ENSCCRG00000082554 ENSCCRG00000020888 ENSCCRG00000039138 ENSCCRG00000082407 ENSCCRG00000082669 cldnj (ENSCCRG00000068360) ENSCCRG00000055547 cldnf (ENSCCRG00000081753) ENSCCRG00000070830 ENSCCRG00000067817 ENSCCRG00000056310 ppp5c (ENSCCRG00000019852) tgfb1a (ENSCCRG00000019802) ENSCCRG00000019784 ENSCCRG00000076610 ENSCCRG00000082321 ##22 ENSCCRG00000078377 ENSCCRG00000018145 ENSCCRG00000077276 ENSCCRG00000035981 ENSCCRG00000056158 ENSCCRG00000056403 ENSCCRG00000070415 ENSCCRG00000051673 ENSCCRG00000033565 rnf168 (ENSCCRG00000069968) ENSCCRG00000020069 ece2b (ENSCCRG00000027881) atp1b3b (ENSCCRG00000026730) tfdp2 (ENSCCRG00000026748) rffl (ENSCCRG00000019759) Golden-line barbel MODERN SPECIES 252 ENSSGRG00000031443 ENSSGRG00000031442 ENSSGRG00000031440 ENSSGRG00000031439 cldnf (ENSSGRG00000031438) ENSSGRG00000031436 ENSSGRG00000031435 cldna (ENSSGRG00000031421) ENSSGRG00000031420 ENSSGRG00000031418 ENSSGRG00000031415 ENSSGRG00000031414 ppp5c (ENSSGRG00000030954) tgfb1a (ENSSGRG00000030951) ENSSGRG00000030950 ENSSGRG00000030949 ##22 GPR171 (ENSSGRG00000030946) ENSSGRG00000030945 phax (ENSSGRG00000030944) Cyprininae ANCESTRAL SPECIES ENSGT00950000183201.b.b.a.d ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183201.b.b.a.d ##22 Golden-line barbel MODERN SPECIES 2274 ENSSGRG00000016023 ENSSGRG00000016022 ENSSGRG00000016021 ##22 Goldfish MODERN SPECIES 1752 ENSCARG00000050878 ##22 Euteleosteomorpha ANCESTRAL SPECIES 7 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT00990000210146 ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Protacanthopterygii ANCESTRAL SPECIES 123 ENSGT01100000263536.B.c.a ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949.p ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Northern pike MODERN SPECIES FNDC3A (ENSELUG00000022876) MLNR (ENSELUG00000022884) ENSELUG00000022889 ENSELUG00000022893 guca1c (ENSELUG00000022908) ENSELUG00000022914 ndufc2 (ENSELUG00000025514) rab30 (ENSELUG00000022997) prcp (ENSELUG00000023022) FAM181B (ENSELUG00000023042) ENSELUG00000023068 ENSELUG00000023082 tenm4 (ENSELUG00000023555) nars2 (ENSELUG00000023629) GAB2 (ENSELUG00000023635) ENSELUG00000023656 ##22 yap1 (ENSELUG00000023678) ENSELUG00000023684 trpc6a (ENSELUG00000023802) pgr (ENSELUG00000023857) ARHGAP42 (ENSELUG00000023917) ENSELUG00000029326 ENSELUG00000025575 ENSELUG00000024067 ENSELUG00000024080 cntn5 (ENSELUG00000024055) ENSELUG00000027726 CLC4E (ENSELUG00000026163) ENSELUG00000027447 ENSELUG00000033299 ENSELUG00000024385 Salmoninae ANCESTRAL SPECIES 236 ENSGT01100000263536.B.c.a ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b.h ENSGT00940000158183.h ENSGT00940000158183.g.b ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a.d Huchen MODERN SPECIES 9672 ENSHHUG00000007401 ##22 Salmoninae_a ANCESTRAL SPECIES 112 ENSGT01100000263536.B.c.a ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab.c.b ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b.h ENSGT00940000158183.g.b ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a.d ENSGT00940000159256.p.b ENSGT00940000159112.b.i.a Salmo ANCESTRAL SPECIES 13 ENSGT01100000263536.B.c.a ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab.c.b ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b.h ENSGT00940000158183.g.b ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a.d ENSGT00940000159256.p.b ENSGT00940000159112.b.i.a ENSGT00940000158785.r River trout MODERN SPECIES 18 guca1c (ENSSTUG00000004680) thrsp (ENSSTUG00000004690) ndufc2 (ENSSTUG00000004692) rab30 (ENSSTUG00000004695) prcp (ENSSTUG00000004715) ENSSTUG00000005096 FAM181B (ENSSTUG00000005116) ENSSTUG00000005128 ENSSTUG00000005135 ENSSTUG00000005144 nars2 (ENSSTUG00000005181) ENSSTUG00000005739 ENSSTUG00000005753 GAB2 (ENSSTUG00000005757) ENSSTUG00000005762 ENSSTUG00000005766 ##22 yap1 (ENSSTUG00000005782) ENSSTUG00000005803 trpc6a (ENSSTUG00000005815) pgr (ENSSTUG00000005826) ARHGAP42 (ENSSTUG00000005948) cntn5 (ENSSTUG00000006041) FBXO40 (ENSSTUG00000006373) ttc36 (ENSSTUG00000006379) ENSSTUG00000006387 ENSSTUG00000006397 ENSSTUG00000006409 EHD2 (ENSSTUG00000006414) BICRA (ENSSTUG00000006421) ppp5c (ENSSTUG00000006496) Atlantic salmon MODERN SPECIES 12 ENSSSAG00000082178 ENSSSAG00000099672 ENSSSAG00000087510 guca1c (ENSSSAG00000064617) ndufc2 (ENSSSAG00000064607) ENSSSAG00000085694 rab30 (ENSSSAG00000064598) prcp (ENSSSAG00000106200) ENSSSAG00000064595 FAM181B (ENSSSAG00000105440) ENSSSAG00000064649 tenm4 (ENSSSAG00000101378) ENSSSAG00000110158 nars2 (ENSSSAG00000064656) GAB2 (ENSSSAG00000083340) ENSSSAG00000092742 ##22 YAP1 (ENSSSAG00000089669) ENSSSAG00000086586 ENSSSAG00000064695 TRPC6 (ENSSSAG00000064754) pgr (ENSSSAG00000114879) ARHGAP42 (ENSSSAG00000105303) ENSSSAG00000112677 cntn5 (ENSSSAG00000092837) ENSSSAG00000108514 ENSSSAG00000066366 ttc36 (ENSSSAG00000117120) ENSSSAG00000112042 ENSSSAG00000066396 ENSSSAG00000066371 ENSSSAG00000047648 Oncorhynchus ANCESTRAL SPECIES 89 ENSGT01100000263536.B.c.a ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab.c.b ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b.g.b ENSGT00940000158183.g.a.a ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a.d ENSGT00940000159256.p.b ENSGT00940000159112.b.i.a Rainbow trout MODERN SPECIES 19 guca1c (ENSOMYG00000034779) ENSOMYG00000067232 ndufc2 (ENSOMYG00000034751) rab30 (ENSOMYG00000034765) prcp (ENSOMYG00000064152) ENSOMYG00000038937 FAM181B (ENSOMYG00000038947) tenm4 (ENSOMYG00000076848) ENSOMYG00000055893 ENSOMYG00000051006 ENSOMYG00000073551 ENSOMYG00000051457 nars2 (ENSOMYG00000068246) GAB2 (ENSOMYG00000038548) ENSOMYG00000069547 ENSOMYG00000034803 ##22 YAP1 (ENSOMYG00000062238) ENSOMYG00000064921 ENSOMYG00000075290 ENSOMYG00000057292 ENSOMYG00000075289 ENSOMYG00000049443 ENSOMYG00000054699 TRPC6 (ENSOMYG00000037553) pgr (ENSOMYG00000037566) ARHGAP42 (ENSOMYG00000024700) ENSOMYG00000067352 ENSOMYG00000064649 ENSOMYG00000072207 cntn5 (ENSOMYG00000059815) ENSOMYG00000066026 Oncorhynchus_a ANCESTRAL SPECIES 301 ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab.c.b ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 Coho salmon MODERN SPECIES 6 ENSOKIG00005029139 BICRA (ENSOKIG00005029117) ENSOKIG00005029104 ENSOKIG00005029091 NECTIN1 (ENSOKIG00005029047) ENSOKIG00005029039 ENSOKIG00005029025 FBXO40 (ENSOKIG00005029014) cntn5 (ENSOKIG00005028053) GAB2 (ENSOKIG00005027931) ENSOKIG00005027895 ##22 YAP1 (ENSOKIG00005027876) ENSOKIG00005027867 ENSOKIG00005027851 ENSOKIG00005027831 TRPC6 (ENSOKIG00005027812) pgr (ENSOKIG00005027748) ENSOKIG00005027692 ARHGAP42 (ENSOKIG00005027485) nars2 (ENSOKIG00005027367) tenm4 (ENSOKIG00005025840) ENSOKIG00005025689 FAM181B (ENSOKIG00005025669) ENSOKIG00005025643 prcp (ENSOKIG00005025180) rab30 (ENSOKIG00005025120) Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 1138 ENSOTSG00005039194 ##22 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 143 ENSOTSG00005025347 cideb (ENSOTSG00005025348) ENSOTSG00005025349 dhrs4 (ENSOTSG00005025350) efs (ENSOTSG00005025376) ENSOTSG00005025378 ENSOTSG00005025377 ENSOTSG00005025383 ENSOTSG00005025384 mrpl52 (ENSOTSG00005025400) mmp14a (ENSOTSG00005025401) ENSOTSG00005026343 ENSOTSG00005026344 ENSOTSG00005026345 ENSOTSG00005026346 ##22 ENSOTSG00005026347 ##22 Chinook salmon MODERN SPECIES 143 ENSOTSG00005026347 ##22 ENSOTSG00005026346 ##22 ENSOTSG00005026345 ENSOTSG00005026344 ENSOTSG00005026343 mmp14a (ENSOTSG00005025401) mrpl52 (ENSOTSG00005025400) ENSOTSG00005025384 ENSOTSG00005025383 ENSOTSG00005025377 ENSOTSG00005025378 efs (ENSOTSG00005025376) dhrs4 (ENSOTSG00005025350) ENSOTSG00005025349 cideb (ENSOTSG00005025348) ENSOTSG00005025347 ENSOTSG00005025219 Acanthomorphata ANCESTRAL SPECIES 8 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Cod MODERN SPECIES 7 FNDC3A (ENSGMOG00000002435) MLNR (ENSGMOG00000023579) zgc:153184 (ENSGMOG00000028518) ENSGMOG00000024878 guca1c (ENSGMOG00000036649) ENSGMOG00000023619 ndufc2 (ENSGMOG00000028770) rab30 (ENSGMOG00000028654) prcp (ENSGMOG00000002562) ENSGMOG00000002587 FAM181B (ENSGMOG00000028052) tenm4 (ENSGMOG00000002593) ENSGMOG00000025730 nars2 (ENSGMOG00000002677) GAB2 (ENSGMOG00000002709) ENSGMOG00000029730 ##22 ENSGMOG00000002826 ENSGMOG00000027823 TRPC6 (ENSGMOG00000002863) pgr (ENSGMOG00000002886) ARHGAP42 (ENSGMOG00000002950) cntn5 (ENSGMOG00000010031) ENSGMOG00000022367 ttc36 (ENSGMOG00000018669) ENSGMOG00000036748 TREH (ENSGMOG00000009520) ENSGMOG00000009542 bcl9l (ENSGMOG00000034413) cdon (ENSGMOG00000009574) prdm10 (ENSGMOG00000002789) ENSGMOG00000013446 Euacanthomorphacea ANCESTRAL SPECIES 8 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Pinecone sodierfish MODERN SPECIES 4 RCBTB2 (ENSMMDG00005011587) FNDC3A (ENSMMDG00005011838) MLNR (ENSMMDG00005015212) ENSMMDG00005015214 guca1c (ENSMMDG00005015216) thrsp (ENSMMDG00005015218) ndufc2 (ENSMMDG00005015219) rab30 (ENSMMDG00005015221) prcp (ENSMMDG00005015227) ENSMMDG00005015377 FAM181B (ENSMMDG00005015380) tenm4 (ENSMMDG00005015382) ENSMMDG00005015384 ENSMMDG00005015385 GAB2 (ENSMMDG00005015386) ENSMMDG00005015387 ##22 yap1 (ENSMMDG00005015388) ENSMMDG00005015402 trpc6a (ENSMMDG00005015416) pgr (ENSMMDG00005015606) ARHGAP42 (ENSMMDG00005015874) cntn5 (ENSMMDG00005015927) ENSMMDG00005004515 FBXO40 (ENSMMDG00005004526) ttc36 (ENSMMDG00005004535) NECTIN1 (ENSMMDG00005004540) TREH (ENSMMDG00005004557) DDX6 (ENSMMDG00005004577) CXCR5 (ENSMMDG00005004634) bcl9l (ENSMMDG00005004639) cdon (ENSMMDG00005004659) Percomorphaceae ANCESTRAL SPECIES 8 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Tiger tail seahorse MODERN SPECIES 352 lpar6a (ENSHCOG00000010375) RCBTB2 (ENSHCOG00000010412) FNDC3A (ENSHCOG00000010463) MLNR (ENSHCOG00000010487) zgc:153184 (ENSHCOG00000010492) ENSHCOG00000010495 guca1c (ENSHCOG00000010504) ndufc2 (ENSHCOG00000010686) ENSHCOG00000010707 prcp (ENSHCOG00000010709) FAM181B (ENSHCOG00000010721) ENSHCOG00000000337 tenm4 (ENSHCOG00000011017) nars2 (ENSHCOG00000011107) GAB2 (ENSHCOG00000011119) ENSHCOG00000011129 ##22 yap1 (ENSHCOG00000011146) ENSHCOG00000011156 trpc6a (ENSHCOG00000011804) pgr (ENSHCOG00000012226) ARHGAP42 (ENSHCOG00000012309) cntn5 (ENSHCOG00000012362) FBXO40 (ENSHCOG00000012382) ttc36 (ENSHCOG00000012387) NECTIN1 (ENSHCOG00000000353) DDX6 (ENSHCOG00000012451) bcl9l (ENSHCOG00000012473) cdon (ENSHCOG00000012505) ENSHCOG00000012525 prdm10 (ENSHCOG00000012676) ENSHCOG00000012705 Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Ovalentaria ANCESTRAL SPECIES 8 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Pomacentridae ANCESTRAL SPECIES 27 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Pomacentridae_A ANCESTRAL SPECIES 32 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Amphiprion ANCESTRAL SPECIES 30 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000180355 ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Clown anemonefish MODERN SPECIES 3541 RCBTB2 (ENSAOCG00000012785) FNDC3A (ENSAOCG00000012723) MLNR (ENSAOCG00000012669) zgc:153184 (ENSAOCG00000012646) ENSAOCG00000000775 ENSAOCG00000012621 guca1c (ENSAOCG00000012603) thrsp (ENSAOCG00000012585) ndufc2 (ENSAOCG00000002053) rab30 (ENSAOCG00000012556) prcp (ENSAOCG00000012520) FAM181B (ENSAOCG00000012466) TENM4 (ENSAOCG00000012424) nars2 (ENSAOCG00000012259) GAB2 (ENSAOCG00000012238) ENSAOCG00000012208 ##22 Orange clownfish MODERN SPECIES 23 RCBTB2 (ENSAPEG00000011682) FNDC3A (ENSAPEG00000011747) MLNR (ENSAPEG00000011910) zgc:153184 (ENSAPEG00000011925) ENSAPEG00000011937 ENSAPEG00000011958 guca1c (ENSAPEG00000012002) ndufc2 (ENSAPEG00000011973) thrsp (ENSAPEG00000012027) rab30 (ENSAPEG00000012044) prcp (ENSAPEG00000012050) FAM181B (ENSAPEG00000012092) tenm4 (ENSAPEG00000012129) nars2 (ENSAPEG00000012242) GAB2 (ENSAPEG00000012259) ENSAPEG00000012322 ##22 yap1 (ENSAPEG00000012326) ENSAPEG00000012333 trpc6a (ENSAPEG00000012343) pgr (ENSAPEG00000012579) ARHGAP42 (ENSAPEG00000012641) cntn5 (ENSAPEG00000012796) FBXO40 (ENSAPEG00000012882) ttc36 (ENSAPEG00000012931) NECTIN1 (ENSAPEG00000012944) ENSAPEG00000012964 ENSAPEG00000012979 ENSAPEG00000013018 DDX6 (ENSAPEG00000013047) CXCR5 (ENSAPEG00000013106) bcl9l (ENSAPEG00000013117) Spiny chromis MODERN SPECIES 56 FNDC3A (ENSAPOG00000000640) MLNR (ENSAPOG00000022503) ENSAPOG00000022510 zgc:153184 (ENSAPOG00000022517) ENSAPOG00000022529 ENSAPOG00000022547 guca1c (ENSAPOG00000022573) thrsp (ENSAPOG00000022586) ndufc2 (ENSAPOG00000022606) rab30 (ENSAPOG00000022625) prcp (ENSAPOG00000022636) FAM181B (ENSAPOG00000022653) tenm4 (ENSAPOG00000022857) nars2 (ENSAPOG00000022947) GAB2 (ENSAPOG00000023038) ENSAPOG00000023052 ##22 yap1 (ENSAPOG00000023102) ENSAPOG00000023125 trpc6a (ENSAPOG00000023207) pgr (ENSAPOG00000023767) ARHGAP42 (ENSAPOG00000023987) cntn5 (ENSAPOG00000024066) ENSAPOG00000024077 PCDH11Y (ENSAPOG00000024111) TSC22D3 (ENSAPOG00000024149) MID2 (ENSAPOG00000024234) Bicolor damselfish MODERN SPECIES 1087 tenm4 (ENSSPAG00000006544) nars2 (ENSSPAG00000006472) GAB2 (ENSSPAG00000006421) ENSSPAG00000006397 ##22 Cichlidae ANCESTRAL SPECIES 21 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Pseudocrenilabrinae ANCESTRAL SPECIES 19 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Pseudocrenilabrinae_A ANCESTRAL SPECIES 15 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Haplochromini ANCESTRAL SPECIES 15 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Burton s mouthbrooder MODERN SPECIES 348 ENSHBUG00000001640 lpar6a (ENSHBUG00000001635) RCBTB2 (ENSHBUG00000001634) FNDC3A (ENSHBUG00000001607) MLNR (ENSHBUG00000001572) ENSHBUG00000001565 ENSHBUG00000001561 guca1c (ENSHBUG00000001558) ndufc2 (ENSHBUG00000001550) rab30 (ENSHBUG00000000993) prcp (ENSHBUG00000001535) FAM181B (ENSHBUG00000001528) tenm4 (ENSHBUG00000001502) nars2 (ENSHBUG00000001449) GAB2 (ENSHBUG00000001442) ENSHBUG00000001436 ##22 yap1 (ENSHBUG00000001431) ENSHBUG00000001428 trpc6a (ENSHBUG00000001426) pgr (ENSHBUG00000001421) ARHGAP42 (ENSHBUG00000001415) cntn5 (ENSHBUG00000001407) Haplochromini_A ANCESTRAL SPECIES 23 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 P. nyererei MODERN SPECIES 361 lpar6a (ENSPNYG00000009993) RCBTB2 (ENSPNYG00000009963) FNDC3A (ENSPNYG00000009890) MLNR (ENSPNYG00000009856) zgc:153184 (ENSPNYG00000009844) ENSPNYG00000009823 guca1c (ENSPNYG00000009782) thrsp (ENSPNYG00000009765) ndufc2 (ENSPNYG00000009751) rab30 (ENSPNYG00000009728) prcp (ENSPNYG00000009703) FAM181B (ENSPNYG00000009689) tenm4 (ENSPNYG00000009550) nars2 (ENSPNYG00000009495) GAB2 (ENSPNYG00000009460) ENSPNYG00000009440 ##22 yap1 (ENSPNYG00000009423) ENSPNYG00000009405 trpc6a (ENSPNYG00000009367) pgr (ENSPNYG00000008970) ARHGAP42 (ENSPNYG00000008820) cntn5 (ENSPNYG00000008753) FBXO40 (ENSPNYG00000008689) ttc36 (ENSPNYG00000008668) ENSPNYG00000008632 NECTIN1 (ENSPNYG00000008613) ENSPNYG00000008601 TREH (ENSPNYG00000008583) DDX6 (ENSPNYG00000008538) CXCR5 (ENSPNYG00000008514) bcl9l (ENSPNYG00000008494) Haplochromini_B ANCESTRAL SPECIES 27 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Eastern happy MODERN SPECIES 5 lpar6a (ENSACLG00000023889) RCBTB2 (ENSACLG00000023852) FNDC3A (ENSACLG00000023703) MLNR (ENSACLG00000023691) zgc:153184 (ENSACLG00000023625) ENSACLG00000023603 guca1c (ENSACLG00000023584) thrsp (ENSACLG00000023578) ndufc2 (ENSACLG00000023564) rab30 (ENSACLG00000023526) prcp (ENSACLG00000023492) FAM181B (ENSACLG00000023487) tenm4 (ENSACLG00000023199) nars2 (ENSACLG00000023017) GAB2 (ENSACLG00000022946) ENSACLG00000022929 ##22 yap1 (ENSACLG00000022912) ENSACLG00000022885 trpc6a (ENSACLG00000022839) pgr (ENSACLG00000022799) ARHGAP42 (ENSACLG00000022629) ENSACLG00000022582 cntn5 (ENSACLG00000022377) FBXO40 (ENSACLG00000022351) ttc36 (ENSACLG00000022343) NECTIN1 (ENSACLG00000022327) ENSACLG00000022291 TREH (ENSACLG00000022243) DDX6 (ENSACLG00000022164) CXCR5 (ENSACLG00000022147) bcl9l (ENSACLG00000022129) Zebra mbuna MODERN SPECIES 1096 NEK3 (ENSMZEG00005024007) lpar6a (ENSMZEG00005024009) RCBTB2 (ENSMZEG00005024010) FNDC3A (ENSMZEG00005024011) MLNR (ENSMZEG00005024017) zgc:153184 (ENSMZEG00005024020) ENSMZEG00005024024 guca1c (ENSMZEG00005024028) ndufc2 (ENSMZEG00005024030) rab30 (ENSMZEG00005024032) prcp (ENSMZEG00005024037) FAM181B (ENSMZEG00005024042) tenm4 (ENSMZEG00005024046) nars2 (ENSMZEG00005024050) GAB2 (ENSMZEG00005024053) ENSMZEG00005024056 ##22 yap1 (ENSMZEG00005024057) ENSMZEG00005024060 trpc6a (ENSMZEG00005024064) pgr (ENSMZEG00005024067) ARHGAP42 (ENSMZEG00005024073) cntn5 (ENSMZEG00005024080) FBXO40 (ENSMZEG00005024085) ttc36 (ENSMZEG00005024087) NECTIN1 (ENSMZEG00005024090) ENSMZEG00005024091 TREH (ENSMZEG00005024093) DDX6 (ENSMZEG00005024098) CXCR5 (ENSMZEG00005024102) bcl9l (ENSMZEG00005024105) cdon (ENSMZEG00005024108) Lyretail cichlid MODERN SPECIES 335 lpar6a (ENSNBRG00000001776) RCBTB2 (ENSNBRG00000001800) FNDC3A (ENSNBRG00000001869) MLNR (ENSNBRG00000001998) ENSNBRG00000002024 ENSNBRG00000002035 guca1c (ENSNBRG00000002052) ndufc2 (ENSNBRG00000002064) rab30 (ENSNBRG00000002082) prcp (ENSNBRG00000002097) FAM181B (ENSNBRG00000002127) tenm4 (ENSNBRG00000002145) nars2 (ENSNBRG00000002261) ENSNBRG00000002312 ENSNBRG00000002327 ENSNBRG00000002348 ##22 yap1 (ENSNBRG00000002371) ENSNBRG00000002457 trpc6a (ENSNBRG00000002504) pgr (ENSNBRG00000002569) ARHGAP42 (ENSNBRG00000003195) cntn5 (ENSNBRG00000003275) FBXO40 (ENSNBRG00000003347) ttc36 (ENSNBRG00000003375) NECTIN1 (ENSNBRG00000003383) ENSNBRG00000003396 TREH (ENSNBRG00000003416) DDX6 (ENSNBRG00000003507) DDX6 (ENSNBRG00000003540) CXCR5 (ENSNBRG00000003562) bcl9l (ENSNBRG00000003575) Nile tilapia MODERN SPECIES 5 NEK3 (ENSONIG00000034039) lpar6a (ENSONIG00000021407) RCBTB2 (ENSONIG00000005688) FNDC3A (ENSONIG00000005695) MLNR (ENSONIG00000005699) zgc:153184 (ENSONIG00000029795) ENSONIG00000037374 guca1c (ENSONIG00000005702) thrsp (ENSONIG00000005704) ndufc2 (ENSONIG00000036233) rab30 (ENSONIG00000005708) prcp (ENSONIG00000005709) tenm4 (ENSONIG00000005714) nars2 (ENSONIG00000005718) GAB2 (ENSONIG00000005723) ENSONIG00000005727 ##22 yap1 (ENSONIG00000005729) ENSONIG00000035687 trpc6a (ENSONIG00000005731) pgr (ENSONIG00000041442) ARHGAP42 (ENSONIG00000005735) cntn5 (ENSONIG00000005737) FBXO40 (ENSONIG00000005748) ttc36 (ENSONIG00000005749) NECTIN1 (ENSONIG00000005751) TREH (ENSONIG00000005752) DDX6 (ENSONIG00000005756) CXCR5 (ENSONIG00000021409) bcl9l (ENSONIG00000005760) cdon (ENSONIG00000005762) ENSONIG00000030752 Midas cichlid MODERN SPECIES 97 NEK3 (ENSACIG00000023857) lpar6a (ENSACIG00000023863) FNDC3A (ENSACIG00000023867) MLNR (ENSACIG00000023879) zgc:153184 (ENSACIG00000023882) ENSACIG00000023885 guca1c (ENSACIG00000023886) thrsp (ENSACIG00000023891) ndufc2 (ENSACIG00000023894) rab30 (ENSACIG00000023906) prcp (ENSACIG00000023908) FAM181B (ENSACIG00000023911) tenm4 (ENSACIG00000023913) nars2 (ENSACIG00000023918) GAB2 (ENSACIG00000023921) ENSACIG00000023924 ##22 yap1 (ENSACIG00000023927) trpc6a (ENSACIG00000023929) pgr (ENSACIG00000023940) ARHGAP42 (ENSACIG00000023969) cntn5 (ENSACIG00000023970) ENSACIG00000023971 FBXO40 (ENSACIG00000023972) ttc36 (ENSACIG00000023974) NECTIN1 (ENSACIG00000023976) ENSACIG00000023978 TREH (ENSACIG00000023980) DDX6 (ENSACIG00000023989) CXCR5 (ENSACIG00000023991) bcl9l (ENSACIG00000023992) cdon (ENSACIG00000023995) Atherinomorphae ANCESTRAL SPECIES 15 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Oryzias ANCESTRAL SPECIES 8 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Oryzias_b ANCESTRAL SPECIES 14 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Indian medaka MODERN SPECIES 12 RCBTB2 (ENSOMEG00000001798) FNDC3A (ENSOMEG00000001758) MLNR (ENSOMEG00000001670) zgc:153184 (ENSOMEG00000001664) ENSOMEG00000001660 guca1c (ENSOMEG00000001655) ndufc2 (ENSOMEG00000001648) thrsp (ENSOMEG00000001626) rab30 (ENSOMEG00000001613) prcp (ENSOMEG00000001607) ENSOMEG00000001599 FAM181B (ENSOMEG00000001592) tenm4 (ENSOMEG00000001544) nars2 (ENSOMEG00000001474) GAB2 (ENSOMEG00000001467) ENSOMEG00000001463 ##22 yap1 (ENSOMEG00000001457) ENSOMEG00000001445 trpc6a (ENSOMEG00000001440) pgr (ENSOMEG00000001429) ARHGAP42 (ENSOMEG00000001411) cntn5 (ENSOMEG00000001385) FBXO40 (ENSOMEG00000001377) ttc36 (ENSOMEG00000001376) NECTIN1 (ENSOMEG00000001372) TREH (ENSOMEG00000001356) DDX6 (ENSOMEG00000001347) CXCR5 (ENSOMEG00000001343) bcl9l (ENSOMEG00000001339) cdon (ENSOMEG00000001330) prdm10 (ENSOMEG00000001310) Javanese ricefish MODERN SPECIES 4 RCBTB2 (ENSOJAG00000021373) FNDC3A (ENSOJAG00000021631) zgc:153184 (ENSOJAG00000022247) ENSOJAG00000022252 guca1c (ENSOJAG00000022257) thrsp (ENSOJAG00000022264) ndufc2 (ENSOJAG00000022267) rab30 (ENSOJAG00000022270) prcp (ENSOJAG00000022290) ENSOJAG00000022352 FAM181B (ENSOJAG00000022367) ENSOJAG00000022372 tenm4 (ENSOJAG00000022460) nars2 (ENSOJAG00000022831) GAB2 (ENSOJAG00000022852) ENSOJAG00000022864 ##22 yap1 (ENSOJAG00000022872) ENSOJAG00000022880 trpc6a (ENSOJAG00000022910) pgr (ENSOJAG00000023076) ARHGAP42 (ENSOJAG00000023214) cntn5 (ENSOJAG00000001823) FBXO40 (ENSOJAG00000002022) ttc36 (ENSOJAG00000002029) ENSOJAG00000002043 NECTIN1 (ENSOJAG00000002068) TREH (ENSOJAG00000002092) DDX6 (ENSOJAG00000002172) CXCR5 (ENSOJAG00000002336) bcl9l (ENSOJAG00000002342) cdon (ENSOJAG00000002378) Oryzias_a ANCESTRAL SPECIES 8 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00940000181267 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a Japanese Medaka HdrR MODERN SPECIES 4 FNDC3A (ENSORLG00000002976) MLNR (ENSORLG00000002888) zgc:153184 (ENSORLG00000024871) ENSORLG00000023029 guca1c (ENSORLG00000002874) thrsp (ENSORLG00000002868) ndufc2 (ENSORLG00000002863) rab30 (ENSORLG00000029812) prcp (ENSORLG00000002842) FAM181B (ENSORLG00000002825) ENSORLG00000021895 ENSORLG00000022763 tenm4 (ENSORLG00000002811) nars2 (ENSORLG00000002778) GAB2 (ENSORLG00000002738) ENSORLG00000022863 ##22 yap1 (ENSORLG00000002708) TRPC6 (ENSORLG00000002690) pgr (ENSORLG00000002651) ARHGAP42 (ENSORLG00000002644) cntn5 (ENSORLG00000002616) ENSORLG00000023862 FBXO40 (ENSORLG00000002543) ttc36 (ENSORLG00000002535) NECTIN1 (ENSORLG00000002527) ENSORLG00000024717 ENSORLG00000024498 ENSORLG00000022376 TREH (ENSORLG00000002521) DDX6 (ENSORLG00000002506) CXCR5 (ENSORLG00000002476) Chinese medaka MODERN SPECIES 1047 RCBTB2 (ENSOSIG00000023857) FNDC3A (ENSOSIG00000023872) MLNR (ENSOSIG00000023874) zgc:153184 (ENSOSIG00000023875) ENSOSIG00000023877 guca1c (ENSOSIG00000023878) thrsp (ENSOSIG00000023881) ndufc2 (ENSOSIG00000023882) rab30 (ENSOSIG00000023883) prcp (ENSOSIG00000023886) ENSOSIG00000023888 FAM181B (ENSOSIG00000023891) tenm4 (ENSOSIG00000023897) nars2 (ENSOSIG00000023905) GAB2 (ENSOSIG00000023907) ENSOSIG00000023910 ##22 yap1 (ENSOSIG00000023911) ENSOSIG00000023914 trpc6a (ENSOSIG00000023932) pgr (ENSOSIG00000023944) ARHGAP42 (ENSOSIG00000023953) Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Aplocheiloidei ANCESTRAL SPECIES 8 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Mangrove rivulus MODERN SPECIES 36 ENSKMAG00000004780 lpar6a (ENSKMAG00000004769) RCBTB2 (ENSKMAG00000004725) FNDC3A (ENSKMAG00000004585) ENSKMAG00000004543 zgc:153184 (ENSKMAG00000004530) ENSKMAG00000004508 guca1c (ENSKMAG00000004474) ndufc2 (ENSKMAG00000004455) rab30 (ENSKMAG00000004439) prcp (ENSKMAG00000004395) FAM181B (ENSKMAG00000004379) tenm4 (ENSKMAG00000004153) nars2 (ENSKMAG00000004015) GAB2 (ENSKMAG00000003983) ENSKMAG00000003967 ##22 yap1 (ENSKMAG00000003932) ENSKMAG00000003922 trpc6a (ENSKMAG00000003906) pgr (ENSKMAG00000003875) ARHGAP42 (ENSKMAG00000003786) cntn5 (ENSKMAG00000003682) FBXO40 (ENSKMAG00000003669) ttc36 (ENSKMAG00000003655) NECTIN1 (ENSKMAG00000003645) ENSKMAG00000003629 TREH (ENSKMAG00000003595) DDX6 (ENSKMAG00000003546) CXCR5 (ENSKMAG00000003527) bcl9l (ENSKMAG00000003508) Turquoise killifish MODERN SPECIES 1615 MLNR (ENSNFUG00015008087) ENSNFUG00015008083 RCSD1 (ENSNFUG00015008079) ENSNFUG00015008077 ENSNFUG00015008074 guca1c (ENSNFUG00015008069) thrsp (ENSNFUG00015008063) NDUFC2 (ENSNFUG00015008057) RAB30 (ENSNFUG00015008048) PRCP (ENSNFUG00015007997) ENSNFUG00015007980 FAM181B (ENSNFUG00015007979) tenm4 (ENSNFUG00015006866) NARS2 (ENSNFUG00015006694) GAB2 (ENSNFUG00015006678) MAML2 (ENSNFUG00015006667) ##22 yap1 (ENSNFUG00015006651) KIAA1377 (ENSNFUG00015006643) trpc6a (ENSNFUG00015006639) PGR (ENSNFUG00015006578) ARHGAP42 (ENSNFUG00015005919) ENSNFUG00015005380 CNTN5 (ENSNFUG00015005069) FBXO40 (ENSNFUG00015004983) TTC36 (ENSNFUG00015004974) Nfu_g_1_000521 (ENSNFUG00015004949) TREH (ENSNFUG00015004902) DDX6 (ENSNFUG00015004735) CXCR5 (ENSNFUG00015004694) BCL9L (ENSNFUG00015004686) CDON (ENSNFUG00015004649) Cyprinodontoidei ANCESTRAL SPECIES 9 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00980000199029 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 NAME_4 ANCESTRAL SPECIES 54 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00980000199029 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Mummichog MODERN SPECIES 2346 RCBTB2 (ENSFHEG00000013635) FNDC3A (ENSFHEG00000013799) MLNR (ENSFHEG00000013824) zgc:153184 (ENSFHEG00000013834) ENSFHEG00000013850 guca1c (ENSFHEG00000013872) thrsp (ENSFHEG00000013886) ndufc2 (ENSFHEG00000013895) rab30 (ENSFHEG00000013918) prcp (ENSFHEG00000013966) FAM181B (ENSFHEG00000013980) ENSFHEG00000013988 tenm4 (ENSFHEG00000014066) nars2 (ENSFHEG00000014152) GAB2 (ENSFHEG00000014217) ENSFHEG00000014228 ##22 yap1 (ENSFHEG00000014255) ENSFHEG00000014262 trpc6a (ENSFHEG00000014293) Sheepshead minnow MODERN SPECIES 538 tenm4 (ENSCVAG00000023418) nars2 (ENSCVAG00000023419) GAB2 (ENSCVAG00000023420) ENSCVAG00000023421 ##22 yap1 (ENSCVAG00000023422) ENSCVAG00000023423 trpc6a (ENSCVAG00000023424) pgr (ENSCVAG00000023425) ARHGAP42 (ENSCVAG00000023426) ENSCVAG00000023427 cntn5 (ENSCVAG00000023428) Poeciliinae ANCESTRAL SPECIES 14 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00980000199029 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000154394.b.a.a.a.a.a.b.d ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab.b ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Platyfish MODERN SPECIES 9 MLNR (ENSXMAG00000028025) zgc:153184 (ENSXMAG00000029895) ENSXMAG00000021352 guca1c (ENSXMAG00000007435) thrsp (ENSXMAG00000020232) ndufc2 (ENSXMAG00000023972) ENSXMAG00000028264 ENSXMAG00000023047 rab30 (ENSXMAG00000025848) prcp (ENSXMAG00000007481) FAM181B (ENSXMAG00000020233) tenm4 (ENSXMAG00000007490) nars2 (ENSXMAG00000015442) GAB2 (ENSXMAG00000015477) ENSXMAG00000028255 ENSXMAG00000007534 ##22 yap1 (ENSXMAG00000007536) ENSXMAG00000023671 trpc6a (ENSXMAG00000007545) pgr (ENSXMAG00000007553) ARHGAP42 (ENSXMAG00000007558) cntn5 (ENSXMAG00000007575) FBXO40 (ENSXMAG00000028606) ttc36 (ENSXMAG00000007606) NECTIN1 (ENSXMAG00000007608) ENSXMAG00000025132 TREH (ENSXMAG00000007609) DDX6 (ENSXMAG00000007620) CXCR5 (ENSXMAG00000022083) bcl9l (ENSXMAG00000007630) cdon (ENSXMAG00000007635) Poecilia ANCESTRAL SPECIES 2 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00980000199029 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000154394.b.a.a.a.b.b ENSGT00940000154394.b.a.a.a.a.a.b.d ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab.b ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Guppy MODERN SPECIES 443 MLNR (ENSPREG00000014556) zgc:153184 (ENSPREG00000014569) ENSPREG00000014578 guca1c (ENSPREG00000014583) thrsp (ENSPREG00000014594) ndufc2 (ENSPREG00000014603) ENSPREG00000014611 ENSPREG00000014621 rab30 (ENSPREG00000014634) prcp (ENSPREG00000014756) FAM181B (ENSPREG00000014781) ENSPREG00000014792 tenm4 (ENSPREG00000014816) nars2 (ENSPREG00000014861) GAB2 (ENSPREG00000014885) ENSPREG00000014915 ##22 yap1 (ENSPREG00000014924) ENSPREG00000014936 trpc6a (ENSPREG00000014952) pgr (ENSPREG00000015071) ARHGAP42 (ENSPREG00000015619) cntn5 (ENSPREG00000015774) ENSPREG00000015855 FBXO40 (ENSPREG00000015880) ttc36 (ENSPREG00000015891) NECTIN1 (ENSPREG00000015911) ENSPREG00000015929 ENSPREG00000015944 TREH (ENSPREG00000015984) DDX6 (ENSPREG00000016082) CXCR5 (ENSPREG00000016128) NAME_6 ANCESTRAL SPECIES 356 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab.b ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 Amazon molly DUPLICATION Amazon molly MODERN SPECIES 961 ENSPFOG00000023598 ##22 yap1 (ENSPFOG00000009360) ENSPFOG00000009320 ##22 Amazon molly MODERN SPECIES 961 ENSPFOG00000023598 ##22 yap1 (ENSPFOG00000009360) ENSPFOG00000009320 ##22 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 919 ENSPLAG00000011607 ##22 yap1 (ENSPLAG00000011613) trpc6a (ENSPLAG00000011647) pgr (ENSPLAG00000011667) ARHGAP42 (ENSPLAG00000011781) ENSPLAG00000011792 Sailfin molly MODERN SPECIES 4069 ENSPLAG00000004163 ##22 Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Eupercaria ANCESTRAL SPECIES 7 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Tetraodontidae ANCESTRAL SPECIES 10 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00990000212493 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Fugu MODERN SPECIES 2 lpar6a (ENSTRUG00000014206) RCBTB2 (ENSTRUG00000014127) FNDC3A (ENSTRUG00000013982) MLNR (ENSTRUG00000013958) zgc:153184 (ENSTRUG00000025197) ENSTRUG00000025778 guca1c (ENSTRUG00000013910) thrsp (ENSTRUG00000013902) ndufc2 (ENSTRUG00000029464) rab30 (ENSTRUG00000022559) prcp (ENSTRUG00000013812) FAM181B (ENSTRUG00000013809) tenm4 (ENSTRUG00000013623) nars2 (ENSTRUG00000013557) GAB2 (ENSTRUG00000013479) ENSTRUG00000019759 ##22 yap1 (ENSTRUG00000020886) ENSTRUG00000032293 trpc6a (ENSTRUG00000013189) pgr (ENSTRUG00000013128) ARHGAP42 (ENSTRUG00000012664) cntn5 (ENSTRUG00000012207) FBXO40 (ENSTRUG00000012174) ttc36 (ENSTRUG00000020104) ENSTRUG00000027765 nectin1 (ENSTRUG00000031644) DDX6 (ENSTRUG00000011848) cxcr5 (ENSTRUG00000011814) bcl9l (ENSTRUG00000011780) cdon (ENSTRUG00000011633) prdm10 (ENSTRUG00000011527) Eupecaria_A ANCESTRAL SPECIES 9 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Ballan wrasse MODERN SPECIES 73 or71aq1 (ENSLBEG00000001377) ENSLBEG00000001315 CHRNA10 (ENSLBEG00000001296) PGAP2 (ENSLBEG00000001287) ENSLBEG00000001260 ENSLBEG00000001235 guca1c (ENSLBEG00000001210) thrsp (ENSLBEG00000001172) ndufc2 (ENSLBEG00000001157) rab30 (ENSLBEG00000001146) prcp (ENSLBEG00000001081) FAM181B (ENSLBEG00000001050) tenm4 (ENSLBEG00000000924) nars2 (ENSLBEG00000000890) GAB2 (ENSLBEG00000000658) ENSLBEG00000000631 ##22 yap1 (ENSLBEG00000000590) ENSLBEG00000000559 trpc6a (ENSLBEG00000000469) pgr (ENSLBEG00000000438) ARHGAP42 (ENSLBEG00000000355) cntn5 (ENSLBEG00000000274) ttc36 (ENSLBEG00000028255) FBXO40 (ENSLBEG00000028242) NECTIN1 (ENSLBEG00000028227) ENSLBEG00000028222 Eupecaria_B ANCESTRAL SPECIES 9 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Perciformes ANCESTRAL SPECIES 10 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Cottioidei ANCESTRAL SPECIES 4 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Lumpfish MODERN SPECIES 4 lpar6a (ENSCLMG00005017513) RCBTB2 (ENSCLMG00005017515) FNDC3A (ENSCLMG00005017565) MLNR (ENSCLMG00005018418) zgc:153184 (ENSCLMG00005018419) ENSCLMG00005018421 guca1c (ENSCLMG00005018423) thrsp (ENSCLMG00005018424) ndufc2 (ENSCLMG00005018425) rab30 (ENSCLMG00005018426) prcp (ENSCLMG00005018428) FAM181B (ENSCLMG00005018434) tenm4 (ENSCLMG00005018435) nars2 (ENSCLMG00005018436) GAB2 (ENSCLMG00005018444) ENSCLMG00005018445 ##22 yap1 (ENSCLMG00005018447) ENSCLMG00005018448 TRPC6 (ENSCLMG00005018451) pgr (ENSCLMG00005004334) ARHGAP42 (ENSCLMG00005004734) cntn5 (ENSCLMG00005005405) FBXO40 (ENSCLMG00005005575) ttc36 (ENSCLMG00005005576) NECTIN1 (ENSCLMG00005005578) TREH (ENSCLMG00005005579) ENSCLMG00005005581 DDX6 (ENSCLMG00005005594) CXCR5 (ENSCLMG00005005787) bcl9l (ENSCLMG00005005788) cdon (ENSCLMG00005005790) Stickleback MODERN SPECIES ENSGACG00000011936 lpar6a (ENSGACG00000011947) RCBTB2 (ENSGACG00000011950) FNDC3A (ENSGACG00000011959) ENSGACG00000011973 ENSGACG00000011976 ENSGACG00000011980 guca1c (ENSGACG00000011982) thrsp (ENSGACG00000012003) rab30 (ENSGACG00000012006) prcp (ENSGACG00000012026) FAM181B (ENSGACG00000012067) tenm4 (ENSGACG00000012069) nars2 (ENSGACG00000012085) GAB2 (ENSGACG00000012121) ENSGACG00000012128 ##22 yap1 (ENSGACG00000012139) ENSGACG00000012148 ENSGACG00000012151 trpc6a (ENSGACG00000012155) pgr (ENSGACG00000012162) ARHGAP42 (ENSGACG00000012165) cntn5 (ENSGACG00000012176) FBXO40 (ENSGACG00000012227) ttc36 (ENSGACG00000012229) NECTIN1 (ENSGACG00000012236) TREH (ENSGACG00000012248) DDX6 (ENSGACG00000012258) CXCR5 (ENSGACG00000012278) bcl9l (ENSGACG00000012279) cdon (ENSGACG00000012283) Perciformes_a ANCESTRAL SPECIES 9 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Pike perch MODERN SPECIES 14 ENSSLUG00000000132 lpar6a (ENSSLUG00000000139) RCBTB2 (ENSSLUG00000000151) FNDC3A (ENSSLUG00000000326) MLNR (ENSSLUG00000000740) zgc:153184 (ENSSLUG00000000744) ENSSLUG00000000747 guca1c (ENSSLUG00000000748) thrsp (ENSSLUG00000000753) ndufc2 (ENSSLUG00000000755) rab30 (ENSSLUG00000000760) prcp (ENSSLUG00000000781) tenm4 (ENSSLUG00000000821) nars2 (ENSSLUG00000000838) GAB2 (ENSSLUG00000000859) ENSSLUG00000000865 ##22 yap1 (ENSSLUG00000000871) ENSSLUG00000000883 trpc6a (ENSSLUG00000000936) pgr (ENSSLUG00000001042) ARHGAP42 (ENSSLUG00000001065) cntn5 (ENSSLUG00000001094) FBXO40 (ENSSLUG00000001101) ttc36 (ENSSLUG00000001107) ENSSLUG00000001110 ENSSLUG00000001115 fat3a (ENSSLUG00000001164) ENSSLUG00000001215 ENSSLUG00000001217 ENSSLUG00000001220 GAL3ST2 (ENSSLUG00000001225) Channel bull blenny MODERN SPECIES 4 lpar6a (ENSCGOG00000022022) RCBTB2 (ENSCGOG00000022025) FNDC3A (ENSCGOG00000022139) MLNR (ENSCGOG00000022776) zgc:153184 (ENSCGOG00000022777) ENSCGOG00000022778 guca1c (ENSCGOG00000022779) ndufc2 (ENSCGOG00000022782) thrsp (ENSCGOG00000022784) rab30 (ENSCGOG00000001600) prcp (ENSCGOG00000001646) FAM181B (ENSCGOG00000001771) tenm4 (ENSCGOG00000001892) nars2 (ENSCGOG00000004930) GAB2 (ENSCGOG00000005045) ENSCGOG00000005049 ##22 yap1 (ENSCGOG00000005063) ENSCGOG00000005080 trpc6a (ENSCGOG00000005087) pgr (ENSCGOG00000005236) ARHGAP42 (ENSCGOG00000005456) cntn5 (ENSCGOG00000006402) FBXO40 (ENSCGOG00000008826) ttc36 (ENSCGOG00000008838) NECTIN1 (ENSCGOG00000008841) cdon (ENSCGOG00000008853) prdm10 (ENSCGOG00000009037) aplp2 (ENSCGOG00000009680) ENSCGOG00000011429 dhx34 (ENSCGOG00000011508) spred3 (ENSCGOG00000011541) Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00940000159738 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00940000159738 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 European seabass MODERN SPECIES 3 foxo1a (ENSDLAG00005024010) ENSDLAG00005024181 ENSDLAG00005024184 LPAR6 (ENSDLAG00005024198) RCBTB2 (ENSDLAG00005024207) FNDC3A (ENSDLAG00005024336) MLNR (ENSDLAG00005025176) zgc:153184 (ENSDLAG00005027030) ENSDLAG00005031427 rab30 (ENSDLAG00005034228) ndufc2 (ENSDLAG00005028681) prcp (ENSDLAG00005025207) tenm4 (ENSDLAG00005025323) nars2 (ENSDLAG00005025603) GAB2 (ENSDLAG00005025608) ENSDLAG00005025613 ##22 ENSDLAG00005025614 ENSDLAG00005025618 TRPC6 (ENSDLAG00005025640) pgr (ENSDLAG00005025654) ARHGAP42 (ENSDLAG00005025671) cntn5 (ENSDLAG00005000320) ENSDLAG00005000931 ttc36 (ENSDLAG00005000933) ENSDLAG00005030868 TREH (ENSDLAG00005030211) DDX6 (ENSDLAG00005000950) CXCR5 (ENSDLAG00005001009) bcl9l (ENSDLAG00005001012) ENSDLAG00005001018 cdon (ENSDLAG00005001056) Large yellow croaker MODERN SPECIES 479 AXL (ENSLCRG00005006955) ENSLCRG00005006954 LGALS4 (ENSLCRG00005006952) ryr1b (ENSLCRG00005006706) rasgrp4 (ENSLCRG00005006119) HNRNPUL1 (ENSLCRG00005005308) opa3 (ENSLCRG00005005306) ppp1r13l (ENSLCRG00005005305) TMEM91 (ENSLCRG00005005304) exosc5 (ENSLCRG00005005303) prcp (ENSLCRG00005005300) tenm4 (ENSLCRG00005005285) nars2 (ENSLCRG00005005276) GAB2 (ENSLCRG00005005273) ENSLCRG00005005272 ENSLCRG00005005271 ##22 yap1 (ENSLCRG00005005259) ENSLCRG00005005257 trpc6a (ENSLCRG00005004594) pgr (ENSLCRG00005004469) ARHGAP42 (ENSLCRG00005004413) cntn5 (ENSLCRG00005002465) FBXO40 (ENSLCRG00005002348) ttc36 (ENSLCRG00005002342) NECTIN1 (ENSLCRG00005017686) TREH (ENSLCRG00005017685) DDX6 (ENSLCRG00005017659) CXCR5 (ENSLCRG00005017656) bcl9l (ENSLCRG00005017655) cdon (ENSLCRG00005017653) prdm10 (ENSLCRG00005017648) Gilthead seabream MODERN SPECIES 11 lhfpl6 (ENSSAUG00010005777) NEK3 (ENSSAUG00010005775) lpar6a (ENSSAUG00010005773) RCBTB2 (ENSSAUG00010005698) FNDC3A (ENSSAUG00010000525) MLNR (ENSSAUG00010000210) zgc:153184 (ENSSAUG00010000204) ENSSAUG00010000198 guca1c (ENSSAUG00010000186) NDUFC2 (ENSSAUG00010000182) rab30 (ENSSAUG00010000172) prcp (ENSSAUG00010000134) tenm4 (ENSSAUG00010023225) nars2 (ENSSAUG00010023198) GAB2 (ENSSAUG00010023194) ENSSAUG00010023193 ##22 yap1 (ENSSAUG00010023192) ENSSAUG00010023191 trpc6a (ENSSAUG00010023157) pgr (ENSSAUG00010023099) ARHGAP42 (ENSSAUG00010023076) cntn5 (ENSSAUG00010021956) FBXO40 (ENSSAUG00010021932) ttc36 (ENSSAUG00010021931) NECTIN1 (ENSSAUG00010021930) TREH (ENSSAUG00010021922) DDX6 (ENSSAUG00010021892) CXCR5 (ENSSAUG00010021885) bcl9l (ENSSAUG00010021884) cdon (ENSSAUG00010021883) prdm10 (ENSSAUG00010021777) Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Anabantaria ANCESTRAL SPECIES 9 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Zig-zag eel MODERN SPECIES 4 LPAR6 (ENSMAMG00000011750) RCBTB2 (ENSMAMG00000011758) FNDC3A (ENSMAMG00000011791) MLNR (ENSMAMG00000011877) zgc:153184 (ENSMAMG00000011890) ENSMAMG00000011916 guca1c (ENSMAMG00000011926) ENSMAMG00000011963 ndufc2 (ENSMAMG00000027855) rab30 (ENSMAMG00000011973) prcp (ENSMAMG00000011981) FAM181B (ENSMAMG00000012027) tenm4 (ENSMAMG00000012064) nars2 (ENSMAMG00000012198) GAB2 (ENSMAMG00000012254) ENSMAMG00000012301 ##22 ENSMAMG00000012307 ENSMAMG00000012316 TRPC6 (ENSMAMG00000012357) pgr (ENSMAMG00000013413) ARHGAP42 (ENSMAMG00000013457) cntn5 (ENSMAMG00000013595) ENSMAMG00000013665 ttc36 (ENSMAMG00000013671) ENSMAMG00000013679 TREH (ENSMAMG00000013713) DDX6 (ENSMAMG00000013732) CXCR5 (ENSMAMG00000013853) bcl9l (ENSMAMG00000013830) cdon (ENSMAMG00000013859) prdm10 (ENSMAMG00000013887) Anabantoidei ANCESTRAL SPECIES 14 ENSGT01040000240444.A.a.a.a.a.a ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 Climbing perch MODERN SPECIES 4 FNDC3A (ENSATEG00000010572) MLNR (ENSATEG00000010550) zgc:153184 (ENSATEG00000010539) ENSATEG00000025474 ENSATEG00000026336 guca1c (ENSATEG00000010507) ENSATEG00000010494 ndufc2 (ENSATEG00000030159) rab30 (ENSATEG00000026571) prcp (ENSATEG00000010399) FAM181B (ENSATEG00000010380) ENSATEG00000010371 tenm4 (ENSATEG00000010290) nars2 (ENSATEG00000010262) GAB2 (ENSATEG00000010185) ENSATEG00000010158 ##22 ENSATEG00000010139 ENSATEG00000030012 TRPC6 (ENSATEG00000010091) pgr (ENSATEG00000010053) ARHGAP42 (ENSATEG00000009985) cntn5 (ENSATEG00000009905) ENSATEG00000009818 ttc36 (ENSATEG00000025446) ENSATEG00000009804 TREH (ENSATEG00000009760) DDX6 (ENSATEG00000009693) CXCR5 (ENSATEG00000009676) bcl9l (ENSATEG00000009628) cdon (ENSATEG00000009445) prdm10 (ENSATEG00000009356) Siamese fighting fish MODERN SPECIES 4 RCBTB2 (ENSBSLG00000004239) FNDC3A (ENSBSLG00000007658) MLNR (ENSBSLG00000014936) zgc:153184 (ENSBSLG00000014948) ENSBSLG00000014971 guca1c (ENSBSLG00000014991) thrsp (ENSBSLG00000015010) ndufc2 (ENSBSLG00000015213) rab30 (ENSBSLG00000015295) prcp (ENSBSLG00000015543) FAM181B (ENSBSLG00000015877) ENSBSLG00000016663 tenm4 (ENSBSLG00000020051) nars2 (ENSBSLG00000025913) GAB2 (ENSBSLG00000025993) ENSBSLG00000026069 ##22 yap1 (ENSBSLG00000026154) ENSBSLG00000026197 trpc6a (ENSBSLG00000026572) pgr (ENSBSLG00000026633) ARHGAP42 (ENSBSLG00000026639) cntn5 (ENSBSLG00000026646) FBXO40 (ENSBSLG00000026653) ttc36 (ENSBSLG00000026654) NECTIN1 (ENSBSLG00000026655) TREH (ENSBSLG00000026658) DDX6 (ENSBSLG00000026659) CXCR5 (ENSBSLG00000026660) bcl9l (ENSBSLG00000026661) cdon (ENSBSLG00000026662) prdm10 (ENSBSLG00000026664) Carangaria ANCESTRAL SPECIES 8 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Carangaria_A ANCESTRAL SPECIES 10 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00980000198620 ENSGT00390000006949 ENSGT00900000141067 ENSGT01050000244848.B.a.a ENSGT00730000110915.a ENSGT00940000157114 Seriola ANCESTRAL SPECIES 65 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 Greater amberjack MODERN SPECIES 59 lpar6a (ENSSDUG00000013056) RCBTB2 (ENSSDUG00000013073) FNDC3A (ENSSDUG00000013122) MLNR (ENSSDUG00000013235) zgc:153184 (ENSSDUG00000013250) ENSSDUG00000013267 guca1c (ENSSDUG00000013299) thrsp (ENSSDUG00000013306) ndufc2 (ENSSDUG00000013314) rab30 (ENSSDUG00000013325) prcp (ENSSDUG00000013337) FAM181B (ENSSDUG00000013352) tenm4 (ENSSDUG00000013368) nars2 (ENSSDUG00000013432) GAB2 (ENSSDUG00000013499) ENSSDUG00000013519 ##22 Yellowtail amberjack MODERN SPECIES 2716 RCBTB2 (ENSSLDG00000022272) FNDC3A (ENSSLDG00000022318) MLNR (ENSSLDG00000022451) zgc:153184 (ENSSLDG00000022463) ENSSLDG00000022482 guca1c (ENSSLDG00000022501) thrsp (ENSSLDG00000022512) ndufc2 (ENSSLDG00000022527) rab30 (ENSSLDG00000022533) prcp (ENSSLDG00000022544) ENSSLDG00000022557 FAM181B (ENSSLDG00000022570) tenm4 (ENSSLDG00000022614) nars2 (ENSSLDG00000022896) GAB2 (ENSSLDG00000022946) ENSSLDG00000022956 ##22 Barramundi perch MODERN SPECIES 109 lpar6a (ENSLCAG00010003781) RCBTB2 (ENSLCAG00010003813) FNDC3A (ENSLCAG00010003950) MLNR (ENSLCAG00010004032) zgc:153184 (ENSLCAG00010004037) ENSLCAG00010004043 guca1c (ENSLCAG00010004044) thrsp (ENSLCAG00010004046) ndufc2 (ENSLCAG00010004048) rab30 (ENSLCAG00010004049) prcp (ENSLCAG00010004065) FAM181B (ENSLCAG00010004137) tenm4 (ENSLCAG00010004261) nars2 (ENSLCAG00010004833) GAB2 (ENSLCAG00010004838) ENSLCAG00010004841 ##22 yap1 (ENSLCAG00010004848) ENSLCAG00010004857 trpc6a (ENSLCAG00010004864) pgr (ENSLCAG00010004876) ARHGAP42 (ENSLCAG00010004925) cntn5 (ENSLCAG00010005027) FBXO40 (ENSLCAG00010005299) ttc36 (ENSLCAG00010005304) NECTIN1 (ENSLCAG00010005309) ENSLCAG00010005310 TREH (ENSLCAG00010005317) DDX6 (ENSLCAG00010005356) CXCR5 (ENSLCAG00010005388) bcl9l (ENSLCAG00010005392) cdon (ENSLCAG00010005399) Pleuronectoidei ANCESTRAL SPECIES 35 ENSGT00940000158925 ENSGT00940000159319 ENSGT01100000263484.C.a ENSGT00940000153997.b.a.b.c.a ENSGT00940000168248 ENSGT00940000164751.a ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000156875 ENSGT00940000158099 ENSGT00980000198746 ENSGT00940000154730.b ENSGT01030000234566.e.b.b.a ENSGT01030000234618.D ENSGT00940000157792 ENSGT00950000183201.b.b.a ##22 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.a.b ENSGT00940000158183.d ENSGT00950000183204.a.b ENSGT00390000007968 ENSGT00940000156933.d.a ENSGT00390000006949 ENSGT00900000141067 ENSGT00730000110915.a ENSGT00940000157114 ENSGT00940000158740 ENSGT00530000063252.a.a Turbot MODERN SPECIES 15 LPAR6 (ENSSMAG00000002872) RCBTB2 (ENSSMAG00000002851) FNDC3A (ENSSMAG00000002677) MLNR (ENSSMAG00000002647) zgc:153184 (ENSSMAG00000031718) ENSSMAG00000034995 guca1c (ENSSMAG00000002616) ENSSMAG00000002606 ndufc2 (ENSSMAG00000002527) rab30 (ENSSMAG00000002500) prcp (ENSSMAG00000002457) FAM181B (ENSSMAG00000002451) tenm4 (ENSSMAG00000002017) nars2 (ENSSMAG00000001927) GAB2 (ENSSMAG00000001853) ENSSMAG00000001815 ##22 ENSSMAG00000001801 ENSSMAG00000001791 TRPC6 (ENSSMAG00000001741) pgr (ENSSMAG00000001689) ARHGAP42 (ENSSMAG00000001545) cntn5 (ENSSMAG00000001411) ENSSMAG00000001383 ttc36 (ENSSMAG00000001365) ENSSMAG00000001332 TREH (ENSSMAG00000001301) ENSSMAG00000001253 bcl9l (ENSSMAG00000001239) cdon (ENSSMAG00000001222) prdm10 (ENSSMAG00000001125) ENSSMAG00000000927 Tongue sole MODERN SPECIES 14 ENSCSEG00000005579 LGALS4 (ENSCSEG00000005573) AXL (ENSCSEG00000005564) ENSCSEG00000005561 cyp2y3 (ENSCSEG00000005555) ENSCSEG00000005551 ENSCSEG00000005549 tgfb1a (ENSCSEG00000005544) ppp5c (ENSCSEG00000005534) prcp (ENSCSEG00000005520) ENSCSEG00000005516 FAM181B (ENSCSEG00000005508) tenm4 (ENSCSEG00000005488) nars2 (ENSCSEG00000005464) GAB2 (ENSCSEG00000005457) ENSCSEG00000005449 ##22 yap1 (ENSCSEG00000005445) SYPL2 (ENSCSEG00000005437) pax3b (ENSCSEG00000005432) ENSCSEG00000005430 SGPP2 (ENSCSEG00000005427) ENSCSEG00000005424 farsb (ENSCSEG00000005415) acsl3a (ENSCSEG00000005409) kcne4 (ENSCSEG00000005406) ENSCSEG00000005404 AP1S3 (ENSCSEG00000005403) dhrs12la (ENSCSEG00000005401) wdfy1 (ENSCSEG00000005391) serpine2 (ENSCSEG00000005386) prss16 (ENSCSEG00000005385) Sarcopterygii ANCESTRAL SPECIES 18 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000010494 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000182021 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT01030000235247 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 Coelacanth MODERN SPECIES 543 CLGN (ENSLACG00000002424) ##21 SCOC (ENSLACG00000004488) ENSLACG00000007654 ##22 MAML3 (ENSLACG00000010639) ##22 MGST2 (ENSLACG00000012359) SETD7 (ENSLACG00000012870) zgc:113425 (ENSLACG00000013312) RAB33B (ENSLACG00000013571) mlsl (ENSLACG00000013696) NAA15 (ENSLACG00000013953) MGARP (ENSLACG00000014636) ELF2 (ENSLACG00000015111) NOCT (ENSLACG00000015874) Tetrapoda ANCESTRAL SPECIES 3 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT01030000235247 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT01030000234904 Anura ANCESTRAL SPECIES 2 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403.i ENSGT00940000157587 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288.b ENSGT00940000160288.a ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 Leishan spiny toad MODERN SPECIES ENSLLEG00000003136 ENSLLEG00000003142 INPP4B (ENSLLEG00000003157) ENSLLEG00000003221 ENSLLEG00000003230 RNF150 (ENSLLEG00000003248) TBC1D9 (ENSLLEG00000003273) ENSLLEG00000003329 ENSLLEG00000003334 UCP1 (ENSLLEG00000003339) ELMOD2 (ENSLLEG00000003353) MGAT4D (ENSLLEG00000003366) CLGN (ENSLLEG00000003455) ##21 SCOC (ENSLLEG00000003472) ENSLLEG00000003481 MAML3 (ENSLLEG00000003498) ##22 ENSLLEG00000003514 ENSLLEG00000003522 SETD7 (ENSLLEG00000003543) RAB33B (ENSLLEG00000003582) ENSLLEG00000003588 ENSLLEG00000003597 ENSLLEG00000003629 ENSLLEG00000003659 ENSLLEG00000003666 ENSLLEG00000003672 ENSLLEG00000003679 ENSLLEG00000003685 ENSLLEG00000003690 ELF2 (ENSLLEG00000003697) NOCT (ENSLLEG00000003717) Frog MODERN SPECIES usp38 (ENSXETG00000017515) ENSXETG00000048811 inpp4b (ENSXETG00000021313) ENSXETG00000039862 ENSXETG00000037336 il15 (ENSXETG00000031411) znf330 (ENSXETG00000014970) rnf150 (ENSXETG00000040133) tbc1d9 (ENSXETG00000014933) ucp1 (ENSXETG00000014927) elmod2 (ENSXETG00000014925) mgat4d (ENSXETG00000014915) clgn (ENSXETG00000014911) ##21 scoc (ENSXETG00000040787) ENSXETG00000042487 maml3 (ENSXETG00000016965) ##22 mgst2 (ENSXETG00000036671) ENSXETG00000030456 setd7 (ENSXETG00000016939) XB5734924 [provisional] (ENSXETG00000024517) rab33b (ENSXETG00000047550) XB5866417 [provisional] (ENSXETG00000016901) naa15 (ENSXETG00000016900) NDUFC1 (ENSXETG00000031514) noct (ENSXETG00000016899) elf2 (ENSXETG00000016896) mgarp (ENSXETG00000003337) slc7a11 (ENSXETG00000003335) ENSXETG00000042656 pcdh18 (ENSXETG00000011158) ENSXETG00000041833 Amniota ANCESTRAL SPECIES 2 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT01030000235247 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 Mammalia ANCESTRAL SPECIES 1 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Platypus MODERN SPECIES 3 ANAPC10 (ENSOANG00000013919) HHIP (ENSOANG00000013920) SMARCA5 (ENSOANG00000013921) GAB1 (ENSOANG00000013925) USP38 (ENSOANG00000013926) INPP4B (ENSOANG00000013164) ENSOANG00000047662 ZNF330 (ENSOANG00000013166) RNF150 (ENSOANG00000050448) TBC1D9 (ENSOANG00000013540) UCP1 (ENSOANG00000015294) ELMOD2 (ENSOANG00000015293) ENSOANG00000015292 CLGN (ENSOANG00000015291) ##21 ENSOANG00000051041 ENSOANG00000015289 ##22 MGST2 (ENSOANG00000015288) SETD7 (ENSOANG00000015287) RAB33B (ENSOANG00000036558) ENSOANG00000008971 NAA15 (ENSOANG00000008970) NDUFC1 (ENSOANG00000039590) ENSOANG00000043598 ELF2 (ENSOANG00000047361) NOCT (ENSOANG00000013761) ENSOANG00000013762 SMARCAD1 (ENSOANG00000013764) GRID2 (ENSOANG00000013766) ENSOANG00000047963 CCSER1 (ENSOANG00000014947) MMRN1 (ENSOANG00000014945) Theria ANCESTRAL SPECIES 6 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Eutheria ANCESTRAL SPECIES 2 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Boreoeutheria ANCESTRAL SPECIES 8 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Laurasiatheria ANCESTRAL SPECIES 11 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Laurasiatheria_a ANCESTRAL SPECIES 8 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Artiodactyla ANCESTRAL SPECIES 12 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Suina ANCESTRAL SPECIES 22 ENSGT00390000013722 ENSGT00940000158660 ENSGT00550000075214 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284.ub ENSGT00730000111168 Pig MODERN SPECIES 16 ANAPC10 (ENSSSCG00000033871) HHIP (ENSSSCG00000009045) ENSSSCG00000009046 SMARCA5 (ENSSSCG00000009047) GAB1 (ENSSSCG00000009048) USP38 (ENSSSCG00000009049) INPP4B (ENSSSCG00000009050) IL15 (ENSSSCG00000009051) ZNF330 (ENSSSCG00000009052) RNF150 (ENSSSCG00000009053) TBC1D9 (ENSSSCG00000032741) ELMOD2 (ENSSSCG00000009055) MGAT4D (ENSSSCG00000038236) CLGN (ENSSSCG00000026360) ##21 SCOC (ENSSSCG00000038550) MAML3 (ENSSSCG00000009060) ##22 ENSSSCG00000046543 MGST2 (ENSSSCG00000031736) SETD7 (ENSSSCG00000030396) RAB33B (ENSSSCG00000020711) NAA15 (ENSSSCG00000009061) NDUFC1 (ENSSSCG00000058604) MGARP (ENSSSCG00000009062) ENSSSCG00000057026 ELF2 (ENSSSCG00000029920) NOCT (ENSSSCG00000024596) ENSSSCG00000048383 SLC7A11 (ENSSSCG00000022649) PCDH18 (ENSSSCG00000032749) PABPC4L (ENSSSCG00000009067) PCDH10 (ENSSSCG00000036125) Chacoan peccary MODERN SPECIES 120 ANAPC10 (ENSCWAG00000009870) HHIP (ENSCWAG00000009710) ENSCWAG00000009655 SMARCA5 (ENSCWAG00000009513) GAB1 (ENSCWAG00000009243) USP38 (ENSCWAG00000009147) INPP4B (ENSCWAG00000008695) IL15 (ENSCWAG00000008557) ZNF330 (ENSCWAG00000008534) RNF150 (ENSCWAG00000008342) TBC1D9 (ENSCWAG00000008142) ELMOD2 (ENSCWAG00000008046) MGAT4D (ENSCWAG00000007811) CLGN (ENSCWAG00000021275) ##21 SCOC (ENSCWAG00000021260) MAML3 (ENSCWAG00000021238) ##22 MGST2 (ENSCWAG00000021227) SETD7 (ENSCWAG00000021207) RAB33B (ENSCWAG00000021204) NAA15 (ENSCWAG00000021191) ENSCWAG00000021181 MGARP (ENSCWAG00000021176) ELF2 (ENSCWAG00000021165) NOCT (ENSCWAG00000021150) SLC7A11 (ENSCWAG00000021117) PCDH18 (ENSCWAG00000021090) PABPC4L (ENSCWAG00000021080) PCDH10 (ENSCWAG00000021067) ENSCWAG00000021054 SCLT1 (ENSCWAG00000021033) JADE1 (ENSCWAG00000021004) Artiodactyla_a ANCESTRAL SPECIES 12 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Artiodactyla_b ANCESTRAL SPECIES 16 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Cetacea ANCESTRAL SPECIES 12 ENSGT00940000158660 ENSGT00990000212162 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00950000182864.a.b.b.a.b.a.a.b ENSGT00390000016928 ENSGT00940000156660 ENSGT00940000153169.A.b.b.a.b ENSGT00390000001670 ENSGT00940000158625 ENSGT00940000158926 ENSGT00390000008787.a ENSGT00940000156306 ENSGT00910000147694 ENSGT00390000000153.l.b.c.b.a.b ENSGT00390000012139 ENSGT00530000063652.a.a Odontoceti ANCESTRAL SPECIES 11 ENSGT00390000013722 ENSGT00940000158660 ENSGT00990000212162 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00950000182864.a.b.b.a.b.a.a.b ENSGT00390000016928 ENSGT00940000156660 ENSGT00940000153169.A.b.b.a.a.b ENSGT00940000153169.A.b.b.a.b ENSGT00390000001670 ENSGT00940000158625 ENSGT00940000158926 ENSGT00390000008787.a ENSGT00940000156306 ENSGT00910000147694 ENSGT00390000000153.l.b.c.b.a.b ENSGT00390000012139 Odontoceti_a ANCESTRAL SPECIES 26 ENSGT00390000015089 ENSGT00390000013722 ENSGT00940000158660 ENSGT00990000212162 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00950000182864.a.b.b.a.b.a.a.b ENSGT00390000016928 ENSGT00940000156660 ENSGT00940000153169.A.b.b.a.b ENSGT00390000001670 ENSGT00940000158625 ENSGT00940000158926 ENSGT00390000008787.a ENSGT00940000156306 ENSGT00910000147694 ENSGT00390000000153.l.b.c.b.a.b ENSGT00390000012139 ENSGT00530000063652.a.a Odontoceti_b ANCESTRAL SPECIES 11 ENSGT00390000015089 ENSGT00390000013722 ENSGT00940000158660 ENSGT00990000212162 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00950000182864.a.b.b.a.b.a.a.b ENSGT00390000016928 ENSGT00940000156660 ENSGT00940000153169.A.b.b.a.b ENSGT00390000001670 ENSGT00940000158625 ENSGT00940000158926 ENSGT00390000008787.a ENSGT00940000156306 ENSGT00910000147694 ENSGT00390000000153.l.b.c.b.a.b ENSGT00390000012139 ENSGT00530000063652.a.a Monodontidae ANCESTRAL SPECIES 9 ENSGT00390000015089 ENSGT00390000013722 ENSGT00940000158660 ENSGT00990000212162 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00950000182864.a.b.b.a.b.a.a.b ENSGT00390000016928 ENSGT00940000156660 ENSGT00940000153169.A.b.b.a.b ENSGT00390000001670 ENSGT00940000158625 ENSGT00940000158926 ENSGT00390000008787.a ENSGT00940000156306 ENSGT00910000147694 ENSGT00390000000153.l.b.c.b.a.b ENSGT00390000012139 ENSGT00530000063652.a.a Narwhal MODERN SPECIES 307 ENSMMNG00015016565 HHIP (ENSMMNG00015016532) ENSMMNG00015016476 SMARCA5 (ENSMMNG00015016399) GAB1 (ENSMMNG00015016325) USP38 (ENSMMNG00015016230) INPP4B (ENSMMNG00015015936) IL15 (ENSMMNG00015015698) ZNF330 (ENSMMNG00015015654) RNF150 (ENSMMNG00015015631) ENSMMNG00015013116 TBC1D9 (ENSMMNG00015013089) ELMOD2 (ENSMMNG00015013079) CLGN (ENSMMNG00015013069) ##21 SCOC (ENSMMNG00015013055) MAML3 (ENSMMNG00015013033) ##22 MGST2 (ENSMMNG00015013012) SETD7 (ENSMMNG00015012957) PPP2R2C (ENSMMNG00015012939) WFS1 (ENSMMNG00015012919) SLC9B1 (ENSMMNG00015012884) CISD2 (ENSMMNG00015012855) ENSMMNG00015012793 MANBA (ENSMMNG00015012754) NFKB1 (ENSMMNG00015012707) SLC39A8 (ENSMMNG00015012676) BANK1 (ENSMMNG00015012635) ENSMMNG00015012617 PPP3CA (ENSMMNG00015012547) ENSMMNG00015012516 ENSMMNG00015012507 Beluga whale MODERN SPECIES 13 TBC1D9 (ENSDLEG00000001998) ELMOD2 (ENSDLEG00000001956) CLGN (ENSDLEG00000001932) ##21 SCOC (ENSDLEG00000001918) MAML3 (ENSDLEG00000001906) ##22 MGST2 (ENSDLEG00000001895) SETD7 (ENSDLEG00000001880) PPP2R2C (ENSDLEG00000001869) WFS1 (ENSDLEG00000001861) CISD2 (ENSDLEG00000001852) ENSDLEG00000001738 MANBA (ENSDLEG00000001605) NFKB1 (ENSDLEG00000001502) SLC39A8 (ENSDLEG00000001477) BANK1 (ENSDLEG00000001450) ENSDLEG00000001444 PPP3CA (ENSDLEG00000001417) ENSDLEG00000001406 EMCN (ENSDLEG00000001362) DDIT4L (ENSDLEG00000001345) Vaquita MODERN SPECIES 16 ABCE1 (ENSPSNG00000014453) ENSPSNG00000014531 HHIP (ENSPSNG00000014618) ENSPSNG00000014681 SMARCA5 (ENSPSNG00000014782) GAB1 (ENSPSNG00000014895) USP38 (ENSPSNG00000015085) INPP4B (ENSPSNG00000015200) IL15 (ENSPSNG00000015292) ZNF330 (ENSPSNG00000015475) RNF150 (ENSPSNG00000015526) TBC1D9 (ENSPSNG00000015613) ELMOD2 (ENSPSNG00000015677) CLGN (ENSPSNG00000015754) ##21 SCOC (ENSPSNG00000015865) MAML3 (ENSPSNG00000016048) ##22 ENSPSNG00000016125 ENSPSNG00000016177 SETD7 (ENSPSNG00000016301) PPP2R2C (ENSPSNG00000016392) WFS1 (ENSPSNG00000016467) CISD2 (ENSPSNG00000016497) ENSPSNG00000016573 MANBA (ENSPSNG00000016760) NFKB1 (ENSPSNG00000016882) SLC39A8 (ENSPSNG00000017173) BANK1 (ENSPSNG00000017240) PPP3CA (ENSPSNG00000017541) ENSPSNG00000017663 EMCN (ENSPSNG00000017732) DDIT4L (ENSPSNG00000018061) Dolphin MODERN SPECIES 2967 MAML3 (ENSTTRG00000000674) ##22 MGST2 (ENSTTRG00000000673) Sperm whale MODERN SPECIES 18 HHIP (ENSPCTG00005001627) ENSPCTG00005001593 SMARCA5 (ENSPCTG00005001535) GAB1 (ENSPCTG00005001490) USP38 (ENSPCTG00005001450) INPP4B (ENSPCTG00005001389) IL15 (ENSPCTG00005001318) ZNF330 (ENSPCTG00005001281) RNF150 (ENSPCTG00005001237) TBC1D9 (ENSPCTG00005001153) ENSPCTG00005001118 ELMOD2 (ENSPCTG00005001098) CLGN (ENSPCTG00005001074) ##21 ENSPCTG00005001047 ENSPCTG00005001027 MAML3 (ENSPCTG00005001012) ##22 ENSPCTG00005000996 ENSPCTG00005000987 SETD7 (ENSPCTG00005000966) PPP2R2C (ENSPCTG00005000935) WFS1 (ENSPCTG00005000923) CISD2 (ENSPCTG00005000912) UBE2D3 (ENSPCTG00005000874) MANBA (ENSPCTG00005000794) NFKB1 (ENSPCTG00005000726) SLC39A8 (ENSPCTG00005000697) BANK1 (ENSPCTG00005000621) ENSPCTG00005000582 PPP3CA (ENSPCTG00005000512) ENSPCTG00005000476 EMCN (ENSPCTG00005000427) Blue whale MODERN SPECIES 16 SMARCA5 (ENSBMSG00010002485) GAB1 (ENSBMSG00010002430) USP38 (ENSBMSG00010002350) ENSBMSG00010002305 INPP4B (ENSBMSG00010002249) IL15 (ENSBMSG00010002198) ENSBMSG00010002175 ZNF330 (ENSBMSG00010002166) RNF150 (ENSBMSG00010002115) TBC1D9 (ENSBMSG00010002068) ELMOD2 (ENSBMSG00010002040) MGAT4D (ENSBMSG00010001980) CLGN (ENSBMSG00010001947) ##21 SCOC (ENSBMSG00010001913) ENSBMSG00010001855 MAML3 (ENSBMSG00010001847) ##22 MGST2 (ENSBMSG00010001835) SETD7 (ENSBMSG00010001824) PPP2R2C (ENSBMSG00010001796) WFS1 (ENSBMSG00010001770) SLC9B1 (ENSBMSG00010001740) CISD2 (ENSBMSG00010001715) ENSBMSG00010001687 MANBA (ENSBMSG00010001654) NFKB1 (ENSBMSG00010001621) SLC39A8 (ENSBMSG00010001600) ENSBMSG00010001588 BANK1 (ENSBMSG00010001543) PPP3CA (ENSBMSG00010001488) ENSBMSG00010001448 ENSBMSG00010001432 Pecora ANCESTRAL SPECIES 14 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT01030000234904 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Percora_a ANCESTRAL SPECIES 17 ENSGT00940000156733 ENSGT00940000156801 ENSGT00950000186340 ENSGT00940000158403 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00960000186868 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000173115 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT01030000234904 ENSGT00940000158277 Bovidae ANCESTRAL SPECIES 17 ENSGT00940000156733 ENSGT00940000156801 ENSGT00950000186340 ENSGT00940000158403 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00960000186868 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000173115 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT01030000234904 ENSGT00940000158277 Caprinae ANCESTRAL SPECIES 17 ENSGT00940000156733 ENSGT00940000156801 ENSGT00950000186340 ENSGT00940000158403 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565.t ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000173115 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT01030000234904 ENSGT00950000182802.A.ab.b.b.a Goat DUPLICATION Goat MODERN SPECIES 8 FREM3 (ENSCHIG00000016285) ENSCHIG00000013730 GAB1 (ENSCHIG00000024669) USP38 (ENSCHIG00000023190) INPP4B (ENSCHIG00000019789) IL15 (ENSCHIG00000024482) ENSCHIG00000017067 ZNF330 (ENSCHIG00000009128) RNF150 (ENSCHIG00000025485) TBC1D9 (ENSCHIG00000012014) UCP1 (ENSCHIG00000011037) ELMOD2 (ENSCHIG00000010724) MGAT4D (ENSCHIG00000015716) CLGN (ENSCHIG00000015205) ##21 SCOC (ENSCHIG00000024222) ENSCHIG00000024566 ##22 ENSCHIG00000010711 ##22 MGST2 (ENSCHIG00000013345) SETD7 (ENSCHIG00000009525) RAB33B (ENSCHIG00000020393) NAA15 (ENSCHIG00000022044) ENSCHIG00000016164 MGARP (ENSCHIG00000019441) ELF2 (ENSCHIG00000018436) NOCT (ENSCHIG00000023612) SLC7A11 (ENSCHIG00000002069) PCDH18 (ENSCHIG00000010752) ENSCHIG00000012321 ENSCHIG00000009956 PABPC4L (ENSCHIG00000007231) ENSCHIG00000023086 Goat MODERN SPECIES 8 ENSCHIG00000013730 GAB1 (ENSCHIG00000024669) USP38 (ENSCHIG00000023190) INPP4B (ENSCHIG00000019789) IL15 (ENSCHIG00000024482) ENSCHIG00000017067 ZNF330 (ENSCHIG00000009128) RNF150 (ENSCHIG00000025485) TBC1D9 (ENSCHIG00000012014) UCP1 (ENSCHIG00000011037) ELMOD2 (ENSCHIG00000010724) MGAT4D (ENSCHIG00000015716) CLGN (ENSCHIG00000015205) ##21 SCOC (ENSCHIG00000024222) ENSCHIG00000024566 ##22 ENSCHIG00000010711 ##22 MGST2 (ENSCHIG00000013345) SETD7 (ENSCHIG00000009525) RAB33B (ENSCHIG00000020393) NAA15 (ENSCHIG00000022044) ENSCHIG00000016164 MGARP (ENSCHIG00000019441) ELF2 (ENSCHIG00000018436) NOCT (ENSCHIG00000023612) SLC7A11 (ENSCHIG00000002069) PCDH18 (ENSCHIG00000010752) ENSCHIG00000012321 ENSCHIG00000009956 PABPC4L (ENSCHIG00000007231) ENSCHIG00000023086 PCDH10 (ENSCHIG00000014618) Rambouillet Sheep MODERN SPECIES 8 ENSOARG00020010806 USP38 (ENSOARG00020010864) ENSOARG00020011060 INPP4B (ENSOARG00020011132) IL15 (ENSOARG00020011892) ENSOARG00020012074 ZNF330 (ENSOARG00020012126) RNF150 (ENSOARG00020012195) TBC1D9 (ENSOARG00020012430) UCP1 (ENSOARG00020012680) ELMOD2 (ENSOARG00020012799) ENSOARG00020012870 MGAT4D (ENSOARG00020012924) CLGN (ENSOARG00020013338) ##21 SCOC (ENSOARG00020013497) MAML3 (ENSOARG00020013668) ##22 MGST2 (ENSOARG00020013746) SETD7 (ENSOARG00020013837) RAB33B (ENSOARG00020013960) NAA15 (ENSOARG00020014002) ENSOARG00020014432 MGARP (ENSOARG00020014474) ELF2 (ENSOARG00020014570) NOCT (ENSOARG00020015245) ENSOARG00020015305 SLC7A11 (ENSOARG00020015377) PCDH18 (ENSOARG00020016062) ENSOARG00020016275 ENSOARG00020016313 PABPC4L (ENSOARG00020016347) PCDH10 (ENSOARG00020016452) Bovinae ANCESTRAL SPECIES 13 ENSGT00940000156801 ENSGT00950000186340 ENSGT00940000158403 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043.k ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.g.a ENSGT00390000008828.h ENSGT00950000183201.b.b.a ##22 ENSGT00960000186868 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565.v ENSGT00390000002565.u.a ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00390000007640.b.d.b ENSGT00940000163344 ENSGT01030000234904 Bos ANCESTRAL SPECIES 14 ENSGT00970000194377.a ENSGT00940000156733 ENSGT00940000156801 ENSGT00950000186340 ENSGT00940000158403 ENSGT00940000157587.e ENSGT00390000016264 ENSGT00390000017043.k ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00960000186868 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565.v ENSGT01100000263480.a.a.b.b.b.a.b.a.b.a.a.b.b.a ENSGT00390000002565.u.a ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00390000007640.b.d.b ENSGT00940000163344 Bos_a ANCESTRAL SPECIES 14 ENSGT00940000156733 ENSGT00940000156801 ENSGT00950000186340 ENSGT00940000158403 ENSGT00940000157587.e ENSGT00390000016264 ENSGT00390000017043.k ENSGT00390000017043.l.b ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.g.a ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00960000186868 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565.v ENSGT01100000263480.a.a.b.b.b.a.b.a.b.a.a.b.b.a ENSGT00390000002565.u.a ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00390000007640.b.d.b ENSGT00940000163344 Domestic yak MODERN SPECIES 7 USP38 (ENSBGRG00000020903) INPP4B (ENSBGRG00000020985) ENSBGRG00000021418 IL15 (ENSBGRG00000021437) ENSBGRG00000021569 ENSBGRG00000021593 ENSBGRG00000021644 RNF150 (ENSBGRG00000021671) TBC1D9 (ENSBGRG00000021876) UCP1 (ENSBGRG00000021984) ELMOD2 (ENSBGRG00000022015) MGAT4D (ENSBGRG00000022069) CLGN (ENSBGRG00000022178) ##21 ENSBGRG00000022257 ENSBGRG00000022403 MAML3 (ENSBGRG00000022425) ##22 ENSBGRG00000022464 MGST2 (ENSBGRG00000022483) SETD7 (ENSBGRG00000022543) ENSBGRG00000022639 NAA15 (ENSBGRG00000022725) ENSBGRG00000003696 ENSBGRG00000003713 ENSBGRG00000003729 ELF2 (ENSBGRG00000003822) NOCT (ENSBGRG00000004313) SLC7A11 (ENSBGRG00000004375) ENSBGRG00000004441 PCDH18 (ENSBGRG00000004464) ENSBGRG00000004537 PABPC4L (ENSBGRG00000004569) Wild yak MODERN SPECIES 757 UCP1 (ENSBMUG00000011219) ELMOD2 (ENSBMUG00000011241) MGAT4D (ENSBMUG00000011313) CLGN (ENSBMUG00000011334) ##21 ENSBMUG00000011372 MAML3 (ENSBMUG00000011393) ##22 MGST2 (ENSBMUG00000011404) ENSBMUG00000011414 SETD7 (ENSBMUG00000011467) RAB33B (ENSBMUG00000011485) NAA15 (ENSBMUG00000011551) ENSBMUG00000011575 ENSBMUG00000011603 ELF2 (ENSBMUG00000011706) NOCT (ENSBMUG00000011792) ENSBMUG00000011802 ENSBMUG00000011813 SLC7A11 (ENSBMUG00000011834) Bos_b ANCESTRAL SPECIES 13 ENSGT00970000194377.a ENSGT00940000156733 ENSGT00940000156801 ENSGT00950000186340 ENSGT00940000158403 ENSGT00940000157587.e ENSGT00390000016264 ENSGT00390000017043.k ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00960000186868 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565.v ENSGT01100000263480.a.a.b.b.b.a.b.a.b.a.a.b.b.a ENSGT00390000002565.u.a ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00390000007640.b.d.b ENSGT00940000163344 Hybrid Bos Indicus MODERN SPECIES 8 ENSBIXG00005009006 USP38 (ENSBIXG00005000366) ENSBIXG00005009053 ENSBIXG00005009069 INPP4B (ENSBIXG00005006091) IL15 (ENSBIXG00005000406) ENSBIXG00005000423 RNF150 (ENSBIXG00005009250) TBC1D9 (ENSBIXG00005009304) UCP1 (ENSBIXG00005009326) ELMOD2 (ENSBIXG00005009346) MGAT4D (ENSBIXG00005009367) CLGN (ENSBIXG00005009427) ##21 ENSBIXG00005009516 ENSBIXG00005009545 MAML3 (ENSBIXG00005009559) ##22 ENSBIXG00005009592 MGST2 (ENSBIXG00005009641) SETD7 (ENSBIXG00005009691) RAB33B (ENSBIXG00005007415) NAA15 (ENSBIXG00005009758) ENSBIXG00005009777 ENSBIXG00005009802 ENSBIXG00005009817 ELF2 (ENSBIXG00005009855) NOCT (ENSBIXG00005009863) SLC7A11 (ENSBIXG00005009909) PCDH18 (ENSBIXG00005009956) ENSBIXG00005000726 ENSBIXG00005010001 PABPC4L (ENSBIXG00005010020) Cow MODERN SPECIES 8 GYPB (ENSBTAG00000047331) SMARCA5 (ENSBTAG00000003399) GAB1 (ENSBTAG00000002813) ENSBTAG00000052695 USP38 (ENSBTAG00000001356) INPP4B (ENSBTAG00000014111) IL15 (ENSBTAG00000018200) ZNF330 (ENSBTAG00000000297) RNF150 (ENSBTAG00000049010) TBC1D9 (ENSBTAG00000018951) UCP1 (ENSBTAG00000004647) ELMOD2 (ENSBTAG00000014007) MGAT4D (ENSBTAG00000034281) CLGN (ENSBTAG00000001580) ##21 SCOC (ENSBTAG00000022109) MAML3 (ENSBTAG00000011373) ##22 MGST2 (ENSBTAG00000021779) ENSBTAG00000049381 SETD7 (ENSBTAG00000003581) RAB33B (ENSBTAG00000003208) NAA15 (ENSBTAG00000004745) NDUFC1 (ENSBTAG00000039582) MGARP (ENSBTAG00000002599) ENSBTAG00000015811 ELF2 (ENSBTAG00000020594) NOCT (ENSBTAG00000005998) ENSBTAG00000055067 SLC7A11 (ENSBTAG00000034075) PCDH18 (ENSBTAG00000015549) ENSBTAG00000023895 ENSBTAG00000033967 American bison MODERN SPECIES 3364 IL15 (ENSBBBG00000002172) ENSBBBG00000002177 RNF150 (ENSBBBG00000002181) TBC1D9 (ENSBBBG00000011787) UCP1 (ENSBBBG00000011805) ELMOD2 (ENSBBBG00000011812) MGAT4D (ENSBBBG00000006983) CLGN (ENSBBBG00000011857) ##21 ENSBBBG00000002212 MAML3 (ENSBBBG00000011888) ##22 ENSBBBG00000011891 MGST2 (ENSBBBG00000011906) ENSBBBG00000002220 RAB33B (ENSBBBG00000011910) NAA15 (ENSBBBG00000011936) ENSBBBG00000011947 MGARP (ENSBBBG00000011955) ELF2 (ENSBBBG00000002239) NOCT (ENSBBBG00000011983) ENSBBBG00000011986 ENSBBBG00000011991 SLC7A11 (ENSBBBG00000002250) PCDH18 (ENSBBBG00000012018) ENSBBBG00000012025 ENSBBBG00000012028 Siberian musk deer MODERN SPECIES 198 ENSMMSG00000002473 GAB1 (ENSMMSG00000002392) ENSMMSG00000002368 USP38 (ENSMMSG00000002337) INPP4B (ENSMMSG00000002208) IL15 (ENSMMSG00000002153) ZNF330 (ENSMMSG00000002124) ENSMMSG00000002114 RNF150 (ENSMMSG00000002074) TBC1D9 (ENSMMSG00000002010) UCP1 (ENSMMSG00000001989) ELMOD2 (ENSMMSG00000001964) MGAT4D (ENSMMSG00000001904) CLGN (ENSMMSG00000001862) ##21 SCOC (ENSMMSG00000001826) MAML3 (ENSMMSG00000001791) ##22 ENSMMSG00000001780 MGST2 (ENSMMSG00000001761) SETD7 (ENSMMSG00000001737) RAB33B (ENSMMSG00000001721) NAA15 (ENSMMSG00000001555) ENSMMSG00000001503 MGARP (ENSMMSG00000001480) ELF2 (ENSMMSG00000001389) NOCT (ENSMMSG00000001359) ENSMMSG00000001349 SLC7A11 (ENSMMSG00000001334) PCDH18 (ENSMMSG00000001298) ENSMMSG00000001278 ENSMMSG00000001260 ENSMMSG00000001248 Yarkand deer MODERN SPECIES 28 ENSCHYG00000000861 USP38 (ENSCHYG00000000822) ENSCHYG00000000800 INPP4B (ENSCHYG00000000675) ENSCHYG00000000643 IL15 (ENSCHYG00000000606) ZNF330 (ENSCHYG00000000564) RNF150 (ENSCHYG00000000469) TBC1D9 (ENSCHYG00000000347) UCP1 (ENSCHYG00000000315) ENSCHYG00000000307 ELMOD2 (ENSCHYG00000000281) MGAT4D (ENSCHYG00000000222) CLGN (ENSCHYG00000000178) ##21 ENSCHYG00000000146 MAML3 (ENSCHYG00000000075) ##22 MGST2 (ENSCHYG00000000058) ENSCHYG00000004005 SETD7 (ENSCHYG00000003984) RAB33B (ENSCHYG00000003973) NAA15 (ENSCHYG00000003925) ENSCHYG00000003904 ENSCHYG00000003891 ENSCHYG00000003881 ELF2 (ENSCHYG00000003820) NOCT (ENSCHYG00000003790) ENSCHYG00000003782 ENSCHYG00000003775 SLC7A11 (ENSCHYG00000003749) ENSCHYG00000003723 PCDH18 (ENSCHYG00000003685) Camelidae ANCESTRAL SPECIES 20 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000185087 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Arabian camel MODERN SPECIES 11 ENSCDRG00005000246 GAB1 (ENSCDRG00005000265) USP38 (ENSCDRG00005000298) ENSCDRG00005000327 INPP4B (ENSCDRG00005000441) IL15 (ENSCDRG00005000841) ZNF330 (ENSCDRG00005000859) RNF150 (ENSCDRG00005000887) TBC1D9 (ENSCDRG00005000929) ENSCDRG00005001035 UCP1 (ENSCDRG00005001056) ELMOD2 (ENSCDRG00005001082) MGAT4D (ENSCDRG00005001126) CLGN (ENSCDRG00005001251) ##21 SCOC (ENSCDRG00005001274) MAML3 (ENSCDRG00005001298) ##22 MGST2 (ENSCDRG00005001316) SETD7 (ENSCDRG00005001339) RAB33B (ENSCDRG00005001374) NAA15 (ENSCDRG00005001394) NDUFC1 (ENSCDRG00005001444) MGARP (ENSCDRG00005001454) ELF2 (ENSCDRG00005001499) NOCT (ENSCDRG00005001577) SLC7A11 (ENSCDRG00005001594) ENSCDRG00005001616 PCDH18 (ENSCDRG00005001630) PABPC4L (ENSCDRG00005001675) PCDH10 (ENSCDRG00005001687) ENSCDRG00005001708 SCLT1 (ENSCDRG00005001764) Alpaca MODERN SPECIES 3048 MAML3 (ENSVPAG00000005210) ##22 MGST2 (ENSVPAG00000005209) Laurasiatheria_b ANCESTRAL SPECIES 8 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Laurasiatheria_c ANCESTRAL SPECIES 8 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Chiroptera ANCESTRAL SPECIES 36 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Microchiroptera ANCESTRAL SPECIES 38 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Greater horseshoe bat MODERN SPECIES 9 ENSRFEG00010014311 SMARCA5 (ENSRFEG00010014236) GAB1 (ENSRFEG00010014081) ENSRFEG00010014017 USP38 (ENSRFEG00010013936) INPP4B (ENSRFEG00010013805) IL15 (ENSRFEG00010013629) ZNF330 (ENSRFEG00010013528) RNF150 (ENSRFEG00010013446) TBC1D9 (ENSRFEG00010013080) UCP1 (ENSRFEG00010013035) ELMOD2 (ENSRFEG00010012962) MGAT4D (ENSRFEG00010012579) ENSRFEG00010012509 SCOC (ENSRFEG00010012423) MAML3 (ENSRFEG00010012335) ##22 MGST2 (ENSRFEG00010012252) SETD7 (ENSRFEG00010012204) RAB33B (ENSRFEG00010012186) NAA15 (ENSRFEG00010012093) ENSRFEG00010012050 MGARP (ENSRFEG00010012025) ELF2 (ENSRFEG00010011844) NOCT (ENSRFEG00010011804) SLC7A11 (ENSRFEG00010011764) PCDH18 (ENSRFEG00010011541) ENSRFEG00010011499 PABPC4L (ENSRFEG00010011483) PCDH10 (ENSRFEG00010011383) C4orf33 (ENSRFEG00010011306) SCLT1 (ENSRFEG00010011176) Microbat MODERN SPECIES 938 GAB1 (ENSMLUG00000000457) ENSMLUG00000029899 USP38 (ENSMLUG00000013423) ENSMLUG00000027792 ENSMLUG00000017627 IL15 (ENSMLUG00000007618) ZNF330 (ENSMLUG00000009684) RNF150 (ENSMLUG00000009658) ENSMLUG00000029642 TBC1D9 (ENSMLUG00000009598) UCP1 (ENSMLUG00000009574) ELMOD2 (ENSMLUG00000009559) MGAT4D (ENSMLUG00000009542) CLGN (ENSMLUG00000014092) ##21 SCOC (ENSMLUG00000014087) MAML3 (ENSMLUG00000008845) ##22 MGST2 (ENSMLUG00000008833) SETD7 (ENSMLUG00000008810) RAB33B (ENSMLUG00000006803) NAA15 (ENSMLUG00000009086) NDUFC1 (ENSMLUG00000009082) MGARP (ENSMLUG00000009067) ELF2 (ENSMLUG00000009034) NOCT (ENSMLUG00000009023) ENSMLUG00000022677 SLC7A11 (ENSMLUG00000008864) ENSMLUG00000027616 PCDH18 (ENSMLUG00000015992) PABPC4L (ENSMLUG00000008254) PCDH10 (ENSMLUG00000012385) ENSMLUG00000012525 Megabat MODERN SPECIES 3509 MAML3 (ENSPVAG00000008931) ##22 MGST2 (ENSPVAG00000008929) Equus ANCESTRAL SPECIES 24 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288.d ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT01090000263219.E ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT01090000263420 ENSGT00940000163344 ENSGT00940000158277 Donkey MODERN SPECIES 22 ENSEASG00005027902 SMARCA5 (ENSEASG00005001866) GAB1 (ENSEASG00005005314) USP38 (ENSEASG00005005319) INPP4B (ENSEASG00005007803) ENSEASG00005007814 IL15 (ENSEASG00005036963) ZNF330 (ENSEASG00005007822) RNF150 (ENSEASG00005007830) TBC1D9 (ENSEASG00005007836) UCP1 (ENSEASG00005007842) ELMOD2 (ENSEASG00005007845) MGAT4D (ENSEASG00005007849) CLGN (ENSEASG00005007852) ##21 ENSEASG00005033815 MAML3 (ENSEASG00005007858) ##22 ENSEASG00005007860 SETD7 (ENSEASG00005007862) RAB33B (ENSEASG00005036241) ENSEASG00005007866 NAA15 (ENSEASG00005007865) MGARP (ENSEASG00005025467) ELF2 (ENSEASG00005007869) ENSEASG00005037750 NOCT (ENSEASG00005035151) SLC7A11 (ENSEASG00005007875) PCDH18 (ENSEASG00005007879) ENSEASG00005007882 PABPC4L (ENSEASG00005007883) ENSEASG00005027026 PCDH10 (ENSEASG00005007887) Horse MODERN SPECIES 11 ENSECAG00000059675 USP38 (ENSECAG00000009333) ENSECAG00000054413 INPP4B (ENSECAG00000010327) IL15 (ENSECAG00000014406) ZNF330 (ENSECAG00000014441) RNF150 (ENSECAG00000015385) ENSECAG00000049272 TBC1D9 (ENSECAG00000015440) UCP1 (ENSECAG00000026962) ELMOD2 (ENSECAG00000017466) MGAT4D (ENSECAG00000017651) CLGN (ENSECAG00000017686) ##21 ENSECAG00000047277 ##21 ENSECAG00000030092 MAML3 (ENSECAG00000019137) ##22 MGST2 (ENSECAG00000019195) SETD7 (ENSECAG00000019219) RAB33B (ENSECAG00000019611) NAA15 (ENSECAG00000019842) NDUFC1 (ENSECAG00000021948) MGARP (ENSECAG00000022062) ENSECAG00000049285 ENSECAG00000045220 ELF2 (ENSECAG00000022077) NOCT (ENSECAG00000022676) SLC7A11 (ENSECAG00000022696) PCDH18 (ENSECAG00000022715) ENSECAG00000044629 PABPC4L (ENSECAG00000031416) ENSECAG00000023024 Carnivora ANCESTRAL SPECIES 5 ENSGT00550000075214 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Felidae ANCESTRAL SPECIES 4 ENSGT00960000188301 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00390000013102.e.a.e ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Panthera ANCESTRAL SPECIES 5 ENSGT00960000188301 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00390000013102.e.a.e ENSGT00940000156295 ENSGT00940000168673 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 Panthera_a ANCESTRAL SPECIES 2 ENSGT00960000188301 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00390000013102.e.a.e ENSGT00940000156295 ENSGT00940000168673 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 lion MODERN SPECIES 4 ENSPLOG00000012702 FREM3 (ENSPLOG00000012733) SMARCA5 (ENSPLOG00000012828) GAB1 (ENSPLOG00000012927) USP38 (ENSPLOG00000013115) INPP4B (ENSPLOG00000013206) IL15 (ENSPLOG00000013278) ZNF330 (ENSPLOG00000013327) RNF150 (ENSPLOG00000013378) TBC1D9 (ENSPLOG00000013580) UCP1 (ENSPLOG00000013796) ELMOD2 (ENSPLOG00000013886) MGAT4D (ENSPLOG00000014004) CLGN (ENSPLOG00000014259) ##21 ENSPLOG00000007535 MAML3 (ENSPLOG00000007702) ##22 MGST2 (ENSPLOG00000007800) SETD7 (ENSPLOG00000007858) ENSPLOG00000007887 NAA15 (ENSPLOG00000007913) NDUFC1 (ENSPLOG00000007946) MGARP (ENSPLOG00000007972) ELF2 (ENSPLOG00000008106) NOCT (ENSPLOG00000008343) ENSPLOG00000008359 SLC7A11 (ENSPLOG00000008394) ENSPLOG00000008422 PCDH18 (ENSPLOG00000008459) ENSPLOG00000008574 ENSPLOG00000008600 PABPC4L (ENSPLOG00000008625) leopard MODERN SPECIES 3 ENSPPRG00000017780 FREM3 (ENSPPRG00000002995) SMARCA5 (ENSPPRG00000004925) GAB1 (ENSPPRG00000005605) USP38 (ENSPPRG00000006892) INPP4B (ENSPPRG00000009054) IL15 (ENSPPRG00000012086) ZNF330 (ENSPPRG00000015737) RNF150 (ENSPPRG00000023447) TBC1D9 (ENSPPRG00000022937) UCP1 (ENSPPRG00000022839) ELMOD2 (ENSPPRG00000000147) MGAT4D (ENSPPRG00000001104) CLGN (ENSPPRG00000001604) ##21 ENSPPRG00000002856 MAML3 (ENSPPRG00000003719) ##22 MGST2 (ENSPPRG00000004911) SETD7 (ENSPPRG00000005792) RAB33B (ENSPPRG00000006119) NAA15 (ENSPPRG00000006354) ENSPPRG00000006889 MGARP (ENSPPRG00000007495) ELF2 (ENSPPRG00000009288) NOCT (ENSPPRG00000009488) ENSPPRG00000018533 SLC7A11 (ENSPPRG00000009725) ENSPPRG00000003375 PCDH18 (ENSPPRG00000010334) ENSPPRG00000010956 ENSPPRG00000011242 PABPC4L (ENSPPRG00000018628) Tiger MODERN SPECIES 367 ENSPTIG00000020826 FREM3 (ENSPTIG00000020850) SMARCA5 (ENSPTIG00000020959) GAB1 (ENSPTIG00000021050) USP38 (ENSPTIG00000021206) INPP4B (ENSPTIG00000000345) IL15 (ENSPTIG00000001825) ZNF330 (ENSPTIG00000004314) RNF150 (ENSPTIG00000005145) TBC1D9 (ENSPTIG00000005564) UCP1 (ENSPTIG00000005728) ELMOD2 (ENSPTIG00000005825) MGAT4D (ENSPTIG00000005940) CLGN (ENSPTIG00000006432) ##21 SCOC (ENSPTIG00000006565) ENSPTIG00000010071 ##22 MGST2 (ENSPTIG00000007125) SETD7 (ENSPTIG00000007276) RAB33B (ENSPTIG00000007518) NAA15 (ENSPTIG00000007667) ENSPTIG00000008073 MGARP (ENSPTIG00000008143) ELF2 (ENSPTIG00000008256) NOCT (ENSPTIG00000008672) ENSPTIG00000008903 SLC7A11 (ENSPTIG00000009116) PCDH18 (ENSPTIG00000009440) ENSPTIG00000009656 PABPC4L (ENSPTIG00000010106) PCDH10 (ENSPTIG00000009855) C4orf33 (ENSPTIG00000009912) Cat MODERN SPECIES 235 FREM3 (ENSFCAG00000022741) SMARCA5 (ENSFCAG00000004544) GAB1 (ENSFCAG00000027102) USP38 (ENSFCAG00000024468) ENSFCAG00000049302 INPP4B (ENSFCAG00000026268) IL15 (ENSFCAG00000030158) ZNF330 (ENSFCAG00000025166) RNF150 (ENSFCAG00000033343) TBC1D9 (ENSFCAG00000000874) UCP1 (ENSFCAG00000008906) ELMOD2 (ENSFCAG00000030559) MGAT4D (ENSFCAG00000025557) CLGN (ENSFCAG00000018363) ##21 ENSFCAG00000045955 MAML3 (ENSFCAG00000036439) ##22 MGST2 (ENSFCAG00000028794) SETD7 (ENSFCAG00000015075) RAB33B (ENSFCAG00000039493) NAA15 (ENSFCAG00000025080) MGARP (ENSFCAG00000041698) ELF2 (ENSFCAG00000031687) NOCT (ENSFCAG00000030026) ENSFCAG00000036135 SLC7A11 (ENSFCAG00000003767) ENSFCAG00000035896 PCDH18 (ENSFCAG00000025770) PABPC4L (ENSFCAG00000028270) ENSFCAG00000053663 ENSFCAG00000050873 PCDH10 (ENSFCAG00000024808) Caniformia ANCESTRAL SPECIES 7 ENSGT00550000075214 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Canidae ANCESTRAL SPECIES 61 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000185087 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000012647.b ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.l ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565.l ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000154846.b.s.b ENSGT00940000177650 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 Canis_lupus ANCESTRAL SPECIES 48 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000012647.b ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.l ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565.l ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000154846.b.s.b ENSGT00940000177650 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 Dog MODERN SPECIES 10 GAB1 (ENSCAFG00845018786) USP38 (ENSCAFG00845018979) ENSCAFG00845019092 INPP4B (ENSCAFG00845019237) IL15 (ENSCAFG00845019627) ENSCAFG00845019765 ZNF330 (ENSCAFG00845019797) RNF150 (ENSCAFG00845019931) TBC1D9 (ENSCAFG00845020204) UCP1 (ENSCAFG00845020627) ELMOD2 (ENSCAFG00845020750) MGAT4D (ENSCAFG00845020851) CLGN (ENSCAFG00845021226) ##21 SCOC (ENSCAFG00845021519) MAML3 (ENSCAFG00845021815) ##22 MGST2 (ENSCAFG00845021915) SETD7 (ENSCAFG00845022033) RAB33B (ENSCAFG00845022148) NAA15 (ENSCAFG00845022180) ENSCAFG00845022294 MGARP (ENSCAFG00845022342) ELF2 (ENSCAFG00845022524) NOCT (ENSCAFG00845022799) SLC7A11 (ENSCAFG00845022942) ENSCAFG00845023129 ENSCAFG00845023150 PCDH18 (ENSCAFG00845023190) ENSCAFG00845023278 PABPC4L (ENSCAFG00845023310) PCDH10 (ENSCAFG00845023391) Dingo MODERN SPECIES 120 GAB1 (ENSCAFG00020021176) USP38 (ENSCAFG00020021169) ENSCAFG00020021166 INPP4B (ENSCAFG00020020999) IL15 (ENSCAFG00020020943) ENSCAFG00020020939 ZNF330 (ENSCAFG00020020936) RNF150 (ENSCAFG00020020931) TBC1D9 (ENSCAFG00020020922) UCP1 (ENSCAFG00020020904) ELMOD2 (ENSCAFG00020020899) MGAT4D (ENSCAFG00020020893) CLGN (ENSCAFG00020020884) ##21 ENSCAFG00020020881 ENSCAFG00020020879 ENSCAFG00020020876 ##22 MGST2 (ENSCAFG00020020869) SETD7 (ENSCAFG00020020866) RAB33B (ENSCAFG00020020861) NAA15 (ENSCAFG00020020850) ENSCAFG00020020841 MGARP (ENSCAFG00020020837) ENSCAFG00020020830 ELF2 (ENSCAFG00020020827) NOCT (ENSCAFG00020020824) SLC7A11 (ENSCAFG00020020741) ENSCAFG00020020736 PCDH18 (ENSCAFG00020020721) Red fox MODERN SPECIES 153 INPP4B (ENSVVUG00000020925) IL15 (ENSVVUG00000021347) ENSVVUG00000021352 ZNF330 (ENSVVUG00000021354) RNF150 (ENSVVUG00000021359) TBC1D9 (ENSVVUG00000021364) UCP1 (ENSVVUG00000021376) ELMOD2 (ENSVVUG00000021382) MGAT4D (ENSVVUG00000021390) CLGN (ENSVVUG00000021399) ##21 ENSVVUG00000021420 ENSVVUG00000021428 ##22 MGST2 (ENSVVUG00000021431) SETD7 (ENSVVUG00000021437) RAB33B (ENSVVUG00000021440) NAA15 (ENSVVUG00000021442) ENSVVUG00000021447 ELF2 (ENSVVUG00000021452) NOCT (ENSVVUG00000021461) ENSVVUG00000021476 ENSVVUG00000021478 ENSVVUG00000021484 SLC7A11 (ENSVVUG00000021487) ENSVVUG00000021488 PCDH18 (ENSVVUG00000021489) Caniformia_b ANCESTRAL SPECIES 5 ENSGT00550000075214 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Ursidae ANCESTRAL SPECIES 17 ENSGT00550000075214 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Giant Panda MODERN SPECIES 15 ENSAMEG00000024386 FREM3 (ENSAMEG00000016565) SMARCA5 (ENSAMEG00000009585) GAB1 (ENSAMEG00000009676) USP38 (ENSAMEG00000009698) INPP4B (ENSAMEG00000008050) IL15 (ENSAMEG00000008060) ZNF330 (ENSAMEG00000002960) RNF150 (ENSAMEG00000002953) TBC1D9 (ENSAMEG00000002883) UCP1 (ENSAMEG00000002869) ELMOD2 (ENSAMEG00000002850) MGAT4D (ENSAMEG00000029626) CLGN (ENSAMEG00000010915) ##21 ENSAMEG00000010957 MAML3 (ENSAMEG00000010963) ##22 MGST2 (ENSAMEG00000010971) SETD7 (ENSAMEG00000010974) RAB33B (ENSAMEG00000025425) NAA15 (ENSAMEG00000010988) ENSAMEG00000031523 ENSAMEG00000024797 ELF2 (ENSAMEG00000011046) NOCT (ENSAMEG00000011061) SLC7A11 (ENSAMEG00000011069) PCDH18 (ENSAMEG00000012184) PABPC4L (ENSAMEG00000020099) PCDH10 (ENSAMEG00000025868) C4orf33 (ENSAMEG00000010572) SCLT1 (ENSAMEG00000010566) JADE1 (ENSAMEG00000010542) Ursus ANCESTRAL SPECIES 68 ENSGT00940000158660 ENSGT00550000075214 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 American black bear MODERN SPECIES 1080 ENSUAMG00000022664 ##22 MGST2 (ENSUAMG00000022665) SETD7 (ENSUAMG00000022666) RAB33B (ENSUAMG00000022667) ENSUAMG00000022668 Mustelinae ANCESTRAL SPECIES 156 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000168673 American mink MODERN SPECIES 137 ZNF330 (ENSNVIG00000019588) RNF150 (ENSNVIG00000019611) TBC1D9 (ENSNVIG00000019647) UCP1 (ENSNVIG00000019689) ELMD2 (ENSNVIG00000019717) MGAT4D (ENSNVIG00000019734) CLGN (ENSNVIG00000019812) ##21 SCOC (ENSNVIG00000019861) MAML3 (ENSNVIG00000019910) ##22 MGST2 (ENSNVIG00000019923) SETD7 (ENSNVIG00000019944) ENSNVIG00000019980 NAA15 (ENSNVIG00000020001) NDUC1 (ENSNVIG00000020086) MGARP (ENSNVIG00000020115) ELF2 (ENSNVIG00000020145) NOCT (ENSNVIG00000020230) SLC7A11 (ENSNVIG00000020236) PCDH18 (ENSNVIG00000020261) Ferret MODERN SPECIES 297 INPP4B (ENSMPUG00000016095) IL15 (ENSMPUG00000016096) ENSMPUG00000016097 ZNF330 (ENSMPUG00000016098) RNF150 (ENSMPUG00000016100) TBC1D9 (ENSMPUG00000016101) UCP1 (ENSMPUG00000016103) ELMOD2 (ENSMPUG00000016104) CLGN (ENSMPUG00000016105) ##21 SCOC (ENSMPUG00000016119) MAML3 (ENSMPUG00000016122) ##22 MGST2 (ENSMPUG00000016123) SETD7 (ENSMPUG00000016124) RAB33B (ENSMPUG00000016125) NAA15 (ENSMPUG00000016126) NDUFC1 (ENSMPUG00000016130) MGARP (ENSMPUG00000016132) ELF2 (ENSMPUG00000016135) NOCT (ENSMPUG00000016137) ENSMPUG00000016138 SLC7A11 (ENSMPUG00000016147) PCDH18 (ENSMPUG00000016149) ENSMPUG00000016152 ENSMPUG00000016155 Euarchontoglires ANCESTRAL SPECIES 9 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Primates ANCESTRAL SPECIES 10 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Strepsirrhini ANCESTRAL SPECIES 32 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Bushbaby MODERN SPECIES 156 FREM3 (ENSOGAG00000030589) SMARCA5 (ENSOGAG00000009702) GAB1 (ENSOGAG00000003737) USP38 (ENSOGAG00000003985) ENSOGAG00000031567 ENSOGAG00000011094 IL15 (ENSOGAG00000011090) ZNF330 (ENSOGAG00000011993) RNF150 (ENSOGAG00000006816) ENSOGAG00000027660 TBC1D9 (ENSOGAG00000006809) UCP1 (ENSOGAG00000006807) ELMOD2 (ENSOGAG00000006803) CLGN (ENSOGAG00000012402) ##21 SCOC (ENSOGAG00000026414) MAML3 (ENSOGAG00000033459) ##22 MGST2 (ENSOGAG00000006051) SETD7 (ENSOGAG00000012216) RAB33B (ENSOGAG00000006778) NAA15 (ENSOGAG00000010139) NDUFC1 (ENSOGAG00000008402) MGARP (ENSOGAG00000002013) Lemuriformes ANCESTRAL SPECIES 38 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Mouse lemur MODERN SPECIES 5 SMARCA5 (ENSMICG00000003971) GAB1 (ENSMICG00000009956) USP38 (ENSMICG00000035652) INPP4B (ENSMICG00000006762) IL15 (ENSMICG00000003154) ZNF330 (ENSMICG00000027897) ENSMICG00000044516 RNF150 (ENSMICG00000009057) TBC1D9 (ENSMICG00000009012) ENSMICG00000034102 UCP1 (ENSMICG00000008999) ELMOD2 (ENSMICG00000030808) MGAT4D (ENSMICG00000003973) CLGN (ENSMICG00000007083) ##21 SCOC (ENSMICG00000007077) MAML3 (ENSMICG00000033333) ##22 MGST2 (ENSMICG00000007060) SETD7 (ENSMICG00000007056) RAB33B (ENSMICG00000034809) NAA15 (ENSMICG00000014119) NDUFC1 (ENSMICG00000043951) MGARP (ENSMICG00000030509) ELF2 (ENSMICG00000005810) NOCT (ENSMICG00000046478) SLC7A11 (ENSMICG00000005805) PCDH18 (ENSMICG00000027527) PABPC4L (ENSMICG00000029683) PCDH10 (ENSMICG00000008070) ENSMICG00000047477 C4orf33 (ENSMICG00000042663) SCLT1 (ENSMICG00000017457) Lemuriformes_a ANCESTRAL SPECIES 61 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00390000017890.fb.b ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 Coquerels sifaka MODERN SPECIES 92 ENSPCOG00000024152 ENSPCOG00000018162 TBC1D9 (ENSPCOG00000022369) UCP1 (ENSPCOG00000020219) ELMOD2 (ENSPCOG00000019207) MGAT4D (ENSPCOG00000017123) CLGN (ENSPCOG00000013430) ##21 ENSPCOG00000009673 MAML3 (ENSPCOG00000020317) ##22 MGST2 (ENSPCOG00000026886) SETD7 (ENSPCOG00000018357) RAB33B (ENSPCOG00000014314) NAA15 (ENSPCOG00000026962) NDUFC1 (ENSPCOG00000002891) MGARP (ENSPCOG00000020598) ENSPCOG00000017597 ELF2 (ENSPCOG00000016141) NOCT (ENSPCOG00000013805) SLC7A11 (ENSPCOG00000026918) PCDH18 (ENSPCOG00000027193) Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 1295 ENSPSMG00000023815 ##22 ENSPSMG00000023818 ##22 MGST2 (ENSPSMG00000023823) SETD7 (ENSPSMG00000023843) RAB33B (ENSPSMG00000023852) NAA15 (ENSPSMG00000023890) NDUFC1 (ENSPSMG00000023905) MGARP (ENSPSMG00000000683) ELF2 (ENSPSMG00000000797) ENSPSMG00000000915 NOCT (ENSPSMG00000000919) ENSPSMG00000000927 SLC7A11 (ENSPSMG00000001000) PCDH18 (ENSPSMG00000001093) Greater bamboo lemur MODERN SPECIES 1295 ENSPSMG00000023815 ##22 ENSPSMG00000023818 ##22 MGST2 (ENSPSMG00000023823) SETD7 (ENSPSMG00000023843) RAB33B (ENSPSMG00000023852) NAA15 (ENSPSMG00000023890) NDUFC1 (ENSPSMG00000023905) MGARP (ENSPSMG00000000683) ELF2 (ENSPSMG00000000797) ENSPSMG00000000915 NOCT (ENSPSMG00000000919) ENSPSMG00000000927 SLC7A11 (ENSPSMG00000001000) PCDH18 (ENSPSMG00000001093) Haplorrhini ANCESTRAL SPECIES 20 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Tarsier MODERN SPECIES 4290 MAML3 (ENSTSYG00000000604) ##22 MGST2 (ENSTSYG00000034504) Simiiformes ANCESTRAL SPECIES 10 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00940000157090 ENSGT00910000147956 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 Catarrhini ANCESTRAL SPECIES 14 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00390000007888.c.b.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00910000147140 ENSGT00940000157090 ENSGT00910000147956 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00390000007888.c.b.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00910000147140 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249.a ENSGT00940000165807 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00390000007888.c.b.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00910000147140 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249.a ENSGT00940000165807 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00390000003582.f.c ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00390000007888.c.b.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00910000147140 ENSGT00940000157090 ENSGT00960000187632.b.b ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249.a ENSGT00940000165807 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 Macaca ANCESTRAL SPECIES 18 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00390000003582.f.c ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00910000147140 ENSGT00940000157090 ENSGT00960000187632.b.b ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249.a ENSGT00940000165807 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 Pig-tailed macaque MODERN SPECIES 201 SMARCA5 (ENSMNEG00000031916) GAB1 (ENSMNEG00000032328) USP38 (ENSMNEG00000034149) INPP4B (ENSMNEG00000033774) IL15 (ENSMNEG00000040041) ZNF330 (ENSMNEG00000034157) RNF150 (ENSMNEG00000042816) ENSMNEG00000036378 TBC1D9 (ENSMNEG00000041392) ENSMNEG00000037749 UCP1 (ENSMNEG00000034442) ELMOD2 (ENSMNEG00000000643) MGAT4D (ENSMNEG00000031956) CLGN (ENSMNEG00000026848) ##21 SCOC (ENSMNEG00000045271) MAML3 (ENSMNEG00000040179) ##22 MGST2 (ENSMNEG00000035368) ENSMNEG00000040819 SETD7 (ENSMNEG00000043802) RAB33B (ENSMNEG00000024756) ENSMNEG00000017460 NAA15 (ENSMNEG00000040674) NDUFC1 (ENSMNEG00000041905) MGARP (ENSMNEG00000033215) ELF2 (ENSMNEG00000040596) ENSMNEG00000042407 ENSMNEG00000039485 SLC7A11 (ENSMNEG00000033891) PCDH18 (ENSMNEG00000044945) Macaca_a ANCESTRAL SPECIES 12 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00390000003582.e.c.c.b ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00910000147140 ENSGT00940000157090 ENSGT00960000187632.b.b.a ENSGT00950000183174.B.a ENSGT00940000163505.a.a.a.b.a.b.b.a.a.b.b.a.b.a.b.a.a ENSGT00440000037338 ENSGT01100000263493.b.a.a.a.b.a.a ENSGT00940000154953 ENSGT00940000155249.a ENSGT00940000160324 ENSGT00940000156295 ENSGT01100000263543.a.g.b.b.b.a.b.a.a.b.b.b.b Crab-eating macaque MODERN SPECIES 15 USP38 (ENSMFAG00000031506) ENSMFAG00000048249 INPP4B (ENSMFAG00000004754) IL15 (ENSMFAG00000043515) ZNF330 (ENSMFAG00000030809) RNF150 (ENSMFAG00000041541) ENSMFAG00000051743 TBC1D9 (ENSMFAG00000046063) UCP1 (ENSMFAG00000043786) ELMOD2 (ENSMFAG00000046408) ENSMFAG00000052917 MGAT4D (ENSMFAG00000036899) CLGN (ENSMFAG00000044499) ##21 ENSMFAG00000001579 ENSMFAG00000058013 MAML3 (ENSMFAG00000044421) ##22 MGST2 (ENSMFAG00000046340) ENSMFAG00000045326 SETD7 (ENSMFAG00000002176) ENSMFAG00000061141 ENSMFAG00000057880 RAB33B (ENSMFAG00000003290) ENSMFAG00000052710 NAA15 (ENSMFAG00000041929) ENSMFAG00000053715 MGARP (ENSMFAG00000044238) ENSMFAG00000065417 ELF2 (ENSMFAG00000042627) NOCT (ENSMFAG00000002713) ENSMFAG00000049791 SLC7A11 (ENSMFAG00000037696) Rhesus MODERN SPECIES 15 SMARCA5 (ENSMMUG00000000829) GAB1 (ENSMMUG00000000828) USP38 (ENSMMUG00000000827) INPP4B (ENSMMUG00000003697) IL15 (ENSMMUG00000019092) ZNF330 (ENSMMUG00000060157) RNF150 (ENSMMUG00000010444) ENSMMUG00000054844 TBC1D9 (ENSMMUG00000015246) UCP1 (ENSMMUG00000015244) ELMOD2 (ENSMMUG00000015242) MGAT4D (ENSMMUG00000030139) CLGN (ENSMMUG00000022355) ##21 ENSMMUG00000053045 ENSMMUG00000063075 MAML3 (ENSMMUG00000021998) ##22 MGST2 (ENSMMUG00000021999) SETD7 (ENSMMUG00000001841) RAB33B (ENSMMUG00000020692) ENSMMUG00000056921 ENSMMUG00000057349 ENSMMUG00000062408 NAA15 (ENSMMUG00000018184) ENSMMUG00000053146 MGARP (ENSMMUG00000004196) ENSMMUG00000051902 ELF2 (ENSMMUG00000004984) NOCT (ENSMMUG00000004983) ENSMMUG00000051502 ENSMMUG00000051665 ENSMMUG00000058171 Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00390000003582.f.c ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00390000007888.c.b.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00940000157090 ENSGT00960000187632.b.b ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249.a ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Olive baboon MODERN SPECIES 13 SMARCA5 (ENSPANG00000001175) GAB1 (ENSPANG00000009676) USP38 (ENSPANG00000008197) INPP4B (ENSPANG00000009842) IL15 (ENSPANG00000009677) ZNF330 (ENSPANG00000039505) RNF150 (ENSPANG00000009678) ENSPANG00000030921 TBC1D9 (ENSPANG00000016781) UCP1 (ENSPANG00000019036) ELMOD2 (ENSPANG00000022482) MGAT4D (ENSPANG00000021633) CLGN (ENSPANG00000012438) ##21 SCOC (ENSPANG00000033516) ENSPANG00000047009 MAML3 (ENSPANG00000023379) ##22 MGST2 (ENSPANG00000012875) ENSPANG00000032140 SETD7 (ENSPANG00000012876) RAB33B (ENSPANG00000014740) ENSPANG00000043263 NAA15 (ENSPANG00000020525) NDUFC1 (ENSPANG00000017811) MGARP (ENSPANG00000006628) ENSPANG00000043163 ELF2 (ENSPANG00000006144) NOCT (ENSPANG00000038607) ENSPANG00000045459 ENSPANG00000043069 ENSPANG00000038957 ENSPANG00000042292 Cercopithecinae_d ANCESTRAL SPECIES 21 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00390000003582.f.c ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00390000007888.c.b.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00910000148819 ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249.a ENSGT00940000160324 ENSGT00940000156295 Drill MODERN SPECIES 928 UCP1 (ENSMLEG00000030341) ELMOD2 (ENSMLEG00000041855) MGAT4D (ENSMLEG00000032769) CLGN (ENSMLEG00000017930) ##21 SCOC (ENSMLEG00000036415) ENSMLEG00000041147 MAML3 (ENSMLEG00000043712) ##22 MGST2 (ENSMLEG00000039730) ENSMLEG00000039825 SETD7 (ENSMLEG00000032636) RAB33B (ENSMLEG00000033393) NAA15 (ENSMLEG00000027970) ENSMLEG00000006279 NDUFC1 (ENSMLEG00000041831) MGARP (ENSMLEG00000015920) ELF2 (ENSMLEG00000030858) ENSMLEG00000040699 SLC7A11 (ENSMLEG00000041464) PCDH18 (ENSMLEG00000020718) Sooty mangabey MODERN SPECIES 575 SMARCA5 (ENSCATG00000044917) GAB1 (ENSCATG00000018732) USP38 (ENSCATG00000040394) INPP4B (ENSCATG00000042835) IL15 (ENSCATG00000042052) ZNF330 (ENSCATG00000035879) RNF150 (ENSCATG00000036670) ENSCATG00000033922 TBC1D9 (ENSCATG00000027992) UCP1 (ENSCATG00000039147) ELMOD2 (ENSCATG00000028878) MGAT4D (ENSCATG00000030864) CLGN (ENSCATG00000034016) ##21 SCOC (ENSCATG00000045036) ENSCATG00000035949 MAML3 (ENSCATG00000029477) ##22 MGST2 (ENSCATG00000044814) ENSCATG00000014453 SETD7 (ENSCATG00000030383) RAB33B (ENSCATG00000007092) NAA15 (ENSCATG00000005537) ENSCATG00000016532 NDUFC1 (ENSCATG00000042092) MGARP (ENSCATG00000038439) ELF2 (ENSCATG00000032126) ENSCATG00000041737 SLC7A11 (ENSCATG00000029245) PCDH18 (ENSCATG00000038954) ENSCATG00000041744 Vervet Monkey MODERN SPECIES 26 HHIP (ENSCSAG00000003439) ENSCSAG00000003442 FREM3 (ENSCSAG00000003444) SMARCA5 (ENSCSAG00000003448) GAB1 (ENSCSAG00000003452) USP38 (ENSCSAG00000003455) INPP4B (ENSCSAG00000003489) IL15 (ENSCSAG00000003496) ZNF330 (ENSCSAG00000003500) ENSCSAG00000000390 TBC1D9 (ENSCSAG00000003505) UCP1 (ENSCSAG00000003508) ELMOD2 (ENSCSAG00000003509) MGAT4D (ENSCSAG00000003516) CLGN (ENSCSAG00000003520) ##21 MAML3 (ENSCSAG00000003524) ##22 MGST2 (ENSCSAG00000003527) SETD7 (ENSCSAG00000003529) RAB33B (ENSCSAG00000003531) NAA15 (ENSCSAG00000003534) NDUFC1 (ENSCSAG00000003539) MGARP (ENSCSAG00000003540) ELF2 (ENSCSAG00000003542) NOCT (ENSCSAG00000003545) SLC7A11 (ENSCSAG00000003547) PCDH18 (ENSCSAG00000003551) PCDH10 (ENSCSAG00000003553) ENSCSAG00000000391 C4orf33 (ENSCSAG00000003555) SCLT1 (ENSCSAG00000003559) JADE1 (ENSCSAG00000003562) Rhinopithecus ANCESTRAL SPECIES 223 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00390000002615.p ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00390000007888.c.b.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249.a ENSGT00940000162527 ENSGT00940000165807 ENSGT00940000160324 ENSGT00940000156295 Golden snub-nosed monkey MODERN SPECIES 2857 MGAT4D (ENSRROG00000042389) CLGN (ENSRROG00000027041) ##21 SCOC (ENSRROG00000038575) ENSRROG00000043258 MAML3 (ENSRROG00000039542) ##22 MGST2 (ENSRROG00000028330) ENSRROG00000023844 SETD7 (ENSRROG00000042746) RAB33B (ENSRROG00000033951) NAA15 (ENSRROG00000000220) NDUFC1 (ENSRROG00000024598) MGARP (ENSRROG00000021795) ELF2 (ENSRROG00000031259) ENSRROG00000032107 Black snub-nosed monkey MODERN SPECIES 458 TBC1D9 (ENSRBIG00000041207) ENSRBIG00000035989 UCP1 (ENSRBIG00000042098) ENSRBIG00000008819 MGAT4D (ENSRBIG00000044984) CLGN (ENSRBIG00000036319) ##21 SCOC (ENSRBIG00000032344) ENSRBIG00000029802 MAML3 (ENSRBIG00000031955) ##22 MGST2 (ENSRBIG00000030111) ENSRBIG00000036487 ENSRBIG00000036345 SAMD4A (ENSRBIG00000043506) GCH1 (ENSRBIG00000030302) WDHD1 (ENSRBIG00000036687) SOCS4 (ENSRBIG00000020372) MAPK1IP1L (ENSRBIG00000024081) ENSRBIG00000004712 ENSRBIG00000041453 DLGAP5 (ENSRBIG00000036589) ENSRBIG00000013868 ENSRBIG00000032278 FBXO34 (ENSRBIG00000030413) ATG14 (ENSRBIG00000034331) Hominoidea ANCESTRAL SPECIES 10 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00390000007888.c.b.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00910000147140.b ENSGT00940000157090 ENSGT00910000147956 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 Gibbon MODERN SPECIES 22 FREM3 (ENSNLEG00000005425) SMARCA5 (ENSNLEG00000005383) GAB1 (ENSNLEG00000005366) USP38 (ENSNLEG00000005343) INPP4B (ENSNLEG00000005284) IL15 (ENSNLEG00000005257) ZNF330 (ENSNLEG00000033135) RNF150 (ENSNLEG00000005230) TBC1D9 (ENSNLEG00000005185) UCP1 (ENSNLEG00000005170) ELMOD2 (ENSNLEG00000005149) CLGN (ENSNLEG00000005101) ##21 ENSNLEG00000033539 ENSNLEG00000028161 ENSNLEG00000034591 MAML3 (ENSNLEG00000005077) ##22 ENSNLEG00000029158 MGST2 (ENSNLEG00000005071) ENSNLEG00000028291 ENSNLEG00000027961 SETD7 (ENSNLEG00000033550) RAB33B (ENSNLEG00000032616) ENSNLEG00000034955 RTCB (ENSNLEG00000004960) BPIFC (ENSNLEG00000004931) FBXO7 (ENSNLEG00000004862) TIMP3 (ENSNLEG00000004812) SYN3 (ENSNLEG00000004854) ENSNLEG00000004807 RFPL2 (ENSNLEG00000004795) ENSNLEG00000018922 Hominidae ANCESTRAL SPECIES 12 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00390000007888.c.b.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00910000147140.b ENSGT00940000157090 ENSGT00910000147956 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 Orangutan MODERN SPECIES 17 ENSPPYG00000015094 FREM3 (ENSPPYG00000015093) SMARCA5 (ENSPPYG00000015091) GAB1 (ENSPPYG00000015090) USP38 (ENSPPYG00000015088) INPP4B (ENSPPYG00000015086) IL15 (ENSPPYG00000015085) ZNF330 (ENSPPYG00000015084) RNF150 (ENSPPYG00000015083) TBC1D9 (ENSPPYG00000015082) UCP1 (ENSPPYG00000015081) ELMOD2 (ENSPPYG00000015080) MGAT4D (ENSPPYG00000015079) CLGN (ENSPPYG00000015078) ##21 ENSPPYG00000033334 MAML3 (ENSPPYG00000015075) ##22 MGST2 (ENSPPYG00000015074) ENSPPYG00000038857 SETD7 (ENSPPYG00000015073) RAB33B (ENSPPYG00000015072) ENSPPYG00000035439 NAA15 (ENSPPYG00000015071) NDUFC1 (ENSPPYG00000015070) MGARP (ENSPPYG00000015069) ELF2 (ENSPPYG00000015068) NOCT (ENSPPYG00000033593) ENSPPYG00000041202 SLC7A11 (ENSPPYG00000015066) PCDH18 (ENSPPYG00000015065) ENSPPYG00000033312 PABPC4L (ENSPPYG00000034327) Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00390000007888.c.b.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00910000147140.b ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00550000074784.a.b ENSGT00940000155268.f.a ENSGT00940000163344 Homo/Pan group ANCESTRAL SPECIES 10 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00390000007888.c.b.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00910000147140.b ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 Pan ANCESTRAL SPECIES 7 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00390000007888.c.b.g.b ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00910000147140.b ENSGT00940000157090 ENSGT00910000147956 ENSGT00950000183174.B.a ENSGT01020000234452 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00390000014100.d ENSGT00940000160324 ENSGT00940000156295 ENSGT00550000074784.a.b Chimpanzee MODERN SPECIES 17 SMARCA5 (ENSPTRG00000016472) ENSPTRG00000044130 GAB1 (ENSPTRG00000016471) USP38 (ENSPTRG00000016470) INPP4B (ENSPTRG00000016469) IL15 (ENSPTRG00000016467) ZNF330 (ENSPTRG00000016466) RNF150 (ENSPTRG00000016465) TBC1D9 (ENSPTRG00000016464) UCP1 (ENSPTRG00000016463) ELMOD2 (ENSPTRG00000016462) MGAT4D (ENSPTRG00000031089) CLGN (ENSPTRG00000049174) ##21 ENSPTRG00000045152 SCOC (ENSPTRG00000016460) MAML3 (ENSPTRG00000016459) ##22 MGST2 (ENSPTRG00000016457) ENSPTRG00000051753 ENSPTRG00000043112 SETD7 (ENSPTRG00000039601) RAB33B (ENSPTRG00000016455) ENSPTRG00000050062 ENSPTRG00000051600 NAA15 (ENSPTRG00000016453) NDUFC1 (ENSPTRG00000046657) MGARP (ENSPTRG00000049739) ELF2 (ENSPTRG00000016449) NOCT (ENSPTRG00000016448) ENSPTRG00000044688 SLC7A11 (ENSPTRG00000016446) PCDH18 (ENSPTRG00000024162) Bonobo MODERN SPECIES 17 ENSPPAG00000039385 GAB1 (ENSPPAG00000039393) USP38 (ENSPPAG00000041444) INPP4B (ENSPPAG00000042739) ENSPPAG00000041816 IL15 (ENSPPAG00000043501) ZNF330 (ENSPPAG00000040018) RNF150 (ENSPPAG00000032316) TBC1D9 (ENSPPAG00000029993) UCP1 (ENSPPAG00000027664) ELMOD2 (ENSPPAG00000042771) MGAT4D (ENSPPAG00000036062) CLGN (ENSPPAG00000040396) ##21 ENSPPAG00000033463 ENSPPAG00000042997 MAML3 (ENSPPAG00000002376) ##22 MGST2 (ENSPPAG00000034504) ENSPPAG00000013101 ENSPPAG00000040472 SETD7 (ENSPPAG00000027000) RAB33B (ENSPPAG00000043376) ENSPPAG00000043084 ENSPPAG00000042826 NAA15 (ENSPPAG00000034447) ENSPPAG00000037033 MGARP (ENSPPAG00000040248) ENSPPAG00000037896 ELF2 (ENSPPAG00000016962) NOCT (ENSPPAG00000042856) ENSPPAG00000003317 ENSPPAG00000027209 Human MODERN SPECIES 16 GYPE (ENSG00000197465) FREM3 (ENSG00000183090) SMARCA5 (ENSG00000153147) GAB1 (ENSG00000109458) USP38 (ENSG00000170185) INPP4B (ENSG00000109452) IL15 (ENSG00000164136) ZNF330 (ENSG00000109445) RNF150 (ENSG00000170153) TBC1D9 (ENSG00000109436) UCP1 (ENSG00000109424) ELMOD2 (ENSG00000179387) MGAT4D (ENSG00000205301) CLGN (ENSG00000153132) ##21 SCOC (ENSG00000153130) MAML3 (ENSG00000196782) ##22 MGST2 (ENSG00000085871) SETD7 (ENSG00000145391) RAB33B (ENSG00000172007) NAA15 (ENSG00000164134) NDUFC1 (ENSG00000109390) MGARP (ENSG00000137463) ELF2 (ENSG00000109381) NOCT (ENSG00000151014) SLC7A11 (ENSG00000151012) PCDH18 (ENSG00000189184) PABPC4L (ENSG00000254535) PCDH10 (ENSG00000138650) C4orf33 (ENSG00000151470) SCLT1 (ENSG00000151466) JADE1 (ENSG00000077684) Gorilla MODERN SPECIES 17 GYPA (ENSGGOG00000015552) FREM3 (ENSGGOG00000008352) SMARCA5 (ENSGGOG00000012595) GAB1 (ENSGGOG00000000020) USP38 (ENSGGOG00000002044) INPP4B (ENSGGOG00000027193) IL15 (ENSGGOG00000011285) ZNF330 (ENSGGOG00000006078) RNF150 (ENSGGOG00000023601) TBC1D9 (ENSGGOG00000006878) UCP1 (ENSGGOG00000023085) ELMOD2 (ENSGGOG00000024299) MGAT4D (ENSGGOG00000027687) CLGN (ENSGGOG00000006153) ##21 ENSGGOG00000028186 ENSGGOG00000010453 ##22 MGST2 (ENSGGOG00000004989) ENSGGOG00000040366 ENSGGOG00000044183 SETD7 (ENSGGOG00000011774) ENSGGOG00000036447 RAB33B (ENSGGOG00000040896) ENSGGOG00000039173 ENSGGOG00000039619 NAA15 (ENSGGOG00000008676) NDUFC1 (ENSGGOG00000004832) ELF2 (ENSGGOG00000015963) NOCT (ENSGGOG00000028610) ENSGGOG00000043067 ENSGGOG00000039359 SLC7A11 (ENSGGOG00000005762) Platyrrhini ANCESTRAL SPECIES 5 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00830000128422.b ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00940000157090 ENSGT00910000147956 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 Mas night monkey MODERN SPECIES 467 ZNF330 (ENSANAG00000033634) RNF150 (ENSANAG00000028559) TBC1D9 (ENSANAG00000024972) UCP1 (ENSANAG00000029189) ELMOD2 (ENSANAG00000022200) ENSANAG00000037293 CLGN (ENSANAG00000032298) ##21 SCOC (ENSANAG00000032422) MAML3 (ENSANAG00000036227) ##22 MGST2 (ENSANAG00000030191) ENSANAG00000024657 SETD7 (ENSANAG00000025192) RAB33B (ENSANAG00000027700) ENSANAG00000027372 NAA15 (ENSANAG00000035444) ENSANAG00000002172 NDUFC1 (ENSANAG00000026650) ENSANAG00000024745 MGARP (ENSANAG00000027485) ELF2 (ENSANAG00000028170) NOCT (ENSANAG00000009701) SLC7A11 (ENSANAG00000034963) ENSANAG00000022395 PCDH18 (ENSANAG00000032148) Cebidae ANCESTRAL SPECIES 4 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00830000128422.b ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Marmoset MODERN SPECIES 15 USP38 (ENSCJAG00000002831) ENSCJAG00000071544 ENSCJAG00000080009 INPP4B (ENSCJAG00000002842) ENSCJAG00000065977 IL15 (ENSCJAG00000002909) ENSCJAG00000069761 ZNF330 (ENSCJAG00000002931) RNF150 (ENSCJAG00000002960) TBC1D9 (ENSCJAG00000002968) UCP1 (ENSCJAG00000003017) ELMOD2 (ENSCJAG00000003032) ENSCJAG00000039765 CLGN (ENSCJAG00000003045) ##21 ENSCJAG00000039536 MAML3 (ENSCJAG00000003065) ##22 MGST2 (ENSCJAG00000003073) ENSCJAG00000040564 ENSCJAG00000075463 SETD7 (ENSCJAG00000003081) RAB33B (ENSCJAG00000067266) ENSCJAG00000085317 ENSCJAG00000044687 ENSCJAG00000070849 NAA15 (ENSCJAG00000003095) NDUFC1 (ENSCJAG00000041850) MGARP (ENSCJAG00000079335) ELF2 (ENSCJAG00000003174) ENSCJAG00000077628 ENSCJAG00000074176 NOCT (ENSCJAG00000003158) Cebidae_a ANCESTRAL SPECIES 49 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00830000128422.b ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00910000146867 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 Bolivian squirrel monkey MODERN SPECIES 68 FREM3 (ENSSBOG00000024738) SMARCA5 (ENSSBOG00000036257) GAB1 (ENSSBOG00000036042) USP38 (ENSSBOG00000029166) ENSSBOG00000029349 INPP4B (ENSSBOG00000026274) IL15 (ENSSBOG00000023289) ZNF330 (ENSSBOG00000033260) RNF150 (ENSSBOG00000021561) TBC1D9 (ENSSBOG00000033747) UCP1 (ENSSBOG00000026412) ELMOD2 (ENSSBOG00000021628) MGAT4D (ENSSBOG00000028510) CLGN (ENSSBOG00000030802) ##21 SCOC (ENSSBOG00000029458) MAML3 (ENSSBOG00000035958) ##22 MGST2 (ENSSBOG00000022825) ENSSBOG00000028958 SETD7 (ENSSBOG00000001707) RAB33B (ENSSBOG00000028836) NAA15 (ENSSBOG00000028600) NDUFC1 (ENSSBOG00000020283) MGARP (ENSSBOG00000032681) Capuchin MODERN SPECIES 4 ENSCCAG00000017579 USP38 (ENSCCAG00000036444) ENSCCAG00000031159 ENSCCAG00000017228 INPP4B (ENSCCAG00000036276) IL15 (ENSCCAG00000034837) ZNF330 (ENSCCAG00000028900) RNF150 (ENSCCAG00000020786) TBC1D9 (ENSCCAG00000032177) UCP1 (ENSCCAG00000037986) ELMOD2 (ENSCCAG00000028648) MGAT4D (ENSCCAG00000030185) CLGN (ENSCCAG00000019261) ##21 SCOC (ENSCCAG00000037302) ENSCCAG00000020402 ENSCCAG00000031104 ##22 RBFOX1 (ENSCCAG00000023031) TMEM114 (ENSCCAG00000026039) METTL22 (ENSCCAG00000036160) ABAT (ENSCCAG00000032977) TMEM186 (ENSCCAG00000025271) PMM2 (ENSCCAG00000022972) CARHSP1 (ENSCCAG00000029624) LITAFD (ENSCCAG00000023273) USP7 (ENSCCAG00000036839) C16orf72 (ENSCCAG00000037304) ENSCCAG00000031093 GRIN2A (ENSCCAG00000022916) ATF7IP2 (ENSCCAG00000030196) EMP2 (ENSCCAG00000028003) TEKT5 (ENSCCAG00000022416) Euarchontoglires_A ANCESTRAL SPECIES 9 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Tree shrew MODERN SPECIES 5741 MAML3 (ENSTBEG00000003690) ##22 MGST2 (ENSTBEG00000003267) Glires ANCESTRAL SPECIES 8 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Lagomorpha ANCESTRAL SPECIES 69 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 Rabbit MODERN SPECIES 6 USP38 (ENSOCUG00000011524) ENSOCUG00000033027 INPP4B (ENSOCUG00000005896) ENSOCUG00000036398 IL15 (ENSOCUG00000008827) ENSOCUG00000038390 ZNF330 (ENSOCUG00000014580) RNF150 (ENSOCUG00000013467) TBC1D9 (ENSOCUG00000005559) UCP1 (ENSOCUG00000002297) ELMOD2 (ENSOCUG00000006810) MGAT4D (ENSOCUG00000006809) CLGN (ENSOCUG00000006597) ##21 ENSOCUG00000006591 ENSOCUG00000023227 MAML3 (ENSOCUG00000009376) ##22 ENSOCUG00000009370 SETD7 (ENSOCUG00000009367) NAA15 (ENSOCUG00000017331) NDUFC1 (ENSOCUG00000004419) MGARP (ENSOCUG00000006499) ELF2 (ENSOCUG00000003711) NOCT (ENSOCUG00000005465) SLC7A11 (ENSOCUG00000001662) ENSOCUG00000002051 ENSOCUG00000009004 PCDH18 (ENSOCUG00000009057) ENSOCUG00000032687 ENSOCUG00000026992 ENSOCUG00000030197 ENSOCUG00000035926 Pika MODERN SPECIES 1939 ENSOPRG00000009412 ##22 ENSOPRG00000009398 ENSOPRG00000009378 Rodentia ANCESTRAL SPECIES 13 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Rodentia_A ANCESTRAL SPECIES 24 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Sciuridae ANCESTRAL SPECIES 38 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324.d ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Marmotini ANCESTRAL SPECIES 45 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324.d ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Marmotini_b ANCESTRAL SPECIES 115 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00910000148499 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.bb.a.b ENSGT00390000008828.bb.a.a ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324.d ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 Arctic ground squirrel MODERN SPECIES 43 INPP4B (ENSUPAG00010011818) IL15 (ENSUPAG00010012021) ZNF330 (ENSUPAG00010012039) RNF150 (ENSUPAG00010012043) TBC1D9 (ENSUPAG00010012079) ENSUPAG00010012123 UCP1 (ENSUPAG00010012125) ELMOD2 (ENSUPAG00010012136) MGAT4D (ENSUPAG00010012143) CLGN (ENSUPAG00010012156) ##21 ENSUPAG00010012174 MAML3 (ENSUPAG00010012184) ##22 MGST2 (ENSUPAG00010012193) SETD7 (ENSUPAG00010012201) RAB33B (ENSUPAG00010012211) NAA15 (ENSUPAG00010012214) ENSUPAG00010012276 MGARP (ENSUPAG00010012289) ELF2 (ENSUPAG00010012300) NOCT (ENSUPAG00010012453) SLC7A11 (ENSUPAG00010012469) PCDH18 (ENSUPAG00010012505) PABPC4L (ENSUPAG00010012516) PCDH10 (ENSUPAG00010012531) Squirrel MODERN SPECIES 135 HHIP (ENSSTOG00000006708) FREM3 (ENSSTOG00000026754) SMARCA5 (ENSSTOG00000010683) GAB1 (ENSSTOG00000027891) USP38 (ENSSTOG00000025902) INPP4B (ENSSTOG00000005582) IL15 (ENSSTOG00000005776) ZNF330 (ENSSTOG00000002498) RNF150 (ENSSTOG00000029908) TBC1D9 (ENSSTOG00000001453) UCP1 (ENSSTOG00000003104) ELMOD2 (ENSSTOG00000022401) MGAT4D (ENSSTOG00000030895) CLGN (ENSSTOG00000003055) ##21 ENSSTOG00000028529 MAML3 (ENSSTOG00000004454) ##22 MGST2 (ENSSTOG00000004437) SETD7 (ENSSTOG00000004420) RAB33B (ENSSTOG00000027511) NAA15 (ENSSTOG00000015163) NDUFC1 (ENSSTOG00000023590) MGARP (ENSSTOG00000025833) ELF2 (ENSSTOG00000025317) NOCT (ENSSTOG00000014818) SLC7A11 (ENSSTOG00000009749) Alpin marmot MODERN SPECIES 5 MAP3K2 (ENSMMMG00000020508) ERCC3 (ENSMMMG00000020488) CYP27C1 (ENSMMMG00000020475) BIN1 (ENSMMMG00000020348) ENSMMMG00000020311 ENSMMMG00000020302 ENSMMMG00000020240 ENSMMMG00000020207 TSN (ENSMMMG00000020190) ENSMMMG00000020184 CLASP1 (ENSMMMG00000015185) TFCP2L1 (ENSMMMG00000015130) GLI2 (ENSMMMG00000015099) ENSMMMG00000015084 ##21 SCOC (ENSMMMG00000015060) MAML3 (ENSMMMG00000015052) ##22 MGST2 (ENSMMMG00000015033) SETD7 (ENSMMMG00000015001) RAB33B (ENSMMMG00000014993) NAA15 (ENSMMMG00000014966) NDUFC1 (ENSMMMG00000014960) MGARP (ENSMMMG00000014954) ELF2 (ENSMMMG00000014882) NOCT (ENSMMMG00000014877) SLC7A11 (ENSMMMG00000014855) PCDH18 (ENSMMMG00000014826) ENSMMMG00000014811 ENSMMMG00000014781 PABPC4L (ENSMMMG00000014776) PCDH10 (ENSMMMG00000014721) ENSMMMG00000014709 Eurasian red squirrel MODERN SPECIES 18 ENSSVLG00005008869 FREM3 (ENSSVLG00005008764) SMARCA5 (ENSSVLG00005008713) GAB1 (ENSSVLG00005008645) USP38 (ENSSVLG00005008534) INPP4B (ENSSVLG00005008272) IL15 (ENSSVLG00005008140) ZNF330 (ENSSVLG00005008101) RNF150 (ENSSVLG00005007968) TBC1D9 (ENSSVLG00005007825) UCP1 (ENSSVLG00005007755) ELMOD2 (ENSSVLG00005007698) MGAT4D (ENSSVLG00005007541) CLGN (ENSSVLG00005007446) ##21 SCOC (ENSSVLG00005007378) MAML3 (ENSSVLG00005007329) ##22 SETD7 (ENSSVLG00005007262) RAB33B (ENSSVLG00005007228) NAA15 (ENSSVLG00005007200) NDUFC1 (ENSSVLG00005007177) MGARP (ENSSVLG00005007132) ENSSVLG00005007043 NOCT (ENSSVLG00005007008) SLC7A11 (ENSSVLG00005006943) ENSSVLG00005006915 PCDH18 (ENSSVLG00005006821) PABPC4L (ENSSVLG00005006805) PCDH10 (ENSSVLG00005006755) ENSSVLG00005006725 ENSSVLG00005006687 C4orf33 (ENSSVLG00005006644) Hystricomorpha ANCESTRAL SPECIES 38 ENSGT00390000009908 ENSGT00520000060562 ENSGT00940000156063 ENSGT00940000154978 ENSGT00390000011932 ENSGT00940000160339 ENSGT00390000008611 ENSGT01100000263512.a.a.b.d ENSGT00940000155201.n ENSGT00940000158472 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Hystricomorpha_a ANCESTRAL SPECIES 34 ENSGT00390000009908 ENSGT00520000060562 ENSGT00940000156063 ENSGT00940000154978 ENSGT00390000011932 ENSGT00940000160339 ENSGT00390000008611 ENSGT01100000263512.a.a.b.d ENSGT00940000155201.n ENSGT00940000158472 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 Hystricomorpha_b ANCESTRAL SPECIES 75 ENSGT00390000009908 ENSGT00520000060562 ENSGT00940000156063 ENSGT00940000154978 ENSGT00390000011932 ENSGT00940000160339 ENSGT00390000008611 ENSGT01100000263512.a.a.b.d ENSGT00940000155201.n ENSGT00940000158472 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 Long-tailed chinchilla MODERN SPECIES 135 MMAA (ENSCLAG00000005007) C4orf51 (ENSCLAG00000005155) ZNF827 (ENSCLAG00000005326) ENSCLAG00000005495 SLC10A7 (ENSCLAG00000005576) POU4F2 (ENSCLAG00000004187) TTC29 (ENSCLAG00000004530) EDNRA (ENSCLAG00000005819) TMEM184C (ENSCLAG00000006100) PRMT9 (ENSCLAG00000006351) UCP1 (ENSCLAG00000007517) ELMOD2 (ENSCLAG00000008217) MGAT4D (ENSCLAG00000006558) CLGN (ENSCLAG00000007242) ##21 SCOC (ENSCLAG00000006150) MAML3 (ENSCLAG00000004669) ##22 MGST2 (ENSCLAG00000005175) SETD7 (ENSCLAG00000005370) RAB33B (ENSCLAG00000003133) NAA15 (ENSCLAG00000003865) NDUFC1 (ENSCLAG00000004430) ELF2 (ENSCLAG00000007485) NOCT (ENSCLAG00000003384) SLC7A11 (ENSCLAG00000004373) PCDH18 (ENSCLAG00000005219) PABPC4L (ENSCLAG00000017628) PCDH10 (ENSCLAG00000005145) ENSCLAG00000003063 C4orf33 (ENSCLAG00000003605) SCLT1 (ENSCLAG00000003786) JADE1 (ENSCLAG00000003659) Degu MODERN SPECIES 221 EDNRA (ENSODEG00000002616) TMEM184C (ENSODEG00000002628) PRMT9 (ENSODEG00000002652) ENSODEG00000018807 UCP1 (ENSODEG00000002693) ELMOD2 (ENSODEG00000002719) MGAT4D (ENSODEG00000002754) CLGN (ENSODEG00000002785) ##21 SCOC (ENSODEG00000002813) MAML3 (ENSODEG00000002854) ##22 MGST2 (ENSODEG00000002892) SETD7 (ENSODEG00000002938) RAB33B (ENSODEG00000002979) NAA15 (ENSODEG00000003007) NDUFC1 (ENSODEG00000003018) ENSODEG00000003035 NOCT (ENSODEG00000003057) ENSODEG00000003088 ENSODEG00000004079 SLC7A11 (ENSODEG00000004109) PCDH18 (ENSODEG00000004124) ENSODEG00000019032 Guinea pig MODERN SPECIES 7 SMAD1 (ENSCPOG00000009073) MMAA (ENSCPOG00000004149) ZNF827 (ENSCPOG00000009087) LSM6 (ENSCPOG00000032655) SLC10A7 (ENSCPOG00000015391) POU4F2 (ENSCPOG00000013770) TTC29 (ENSCPOG00000007443) ENSCPOG00000040663 EDNRA (ENSCPOG00000004559) TMEM184C (ENSCPOG00000009210) PRMT9 (ENSCPOG00000009218) UCP1 (ENSCPOG00000001969) ELMOD2 (ENSCPOG00000036772) CLGN (ENSCPOG00000006963) ##21 SCOC (ENSCPOG00000032760) ENSCPOG00000001624 ##22 MGST2 (ENSCPOG00000027305) SETD7 (ENSCPOG00000039921) RAB33B (ENSCPOG00000030742) NAA15 (ENSCPOG00000013184) NDUFC1 (ENSCPOG00000040190) ELF2 (ENSCPOG00000009449) NOCT (ENSCPOG00000003827) SLC7A11 (ENSCPOG00000013036) PCDH18 (ENSCPOG00000003047) PABPC4L (ENSCPOG00000033167) PCDH10 (ENSCPOG00000031544) C4orf33 (ENSCPOG00000034978) SCLT1 (ENSCPOG00000002258) JADE1 (ENSCPOG00000002256) PGRMC2 (ENSCPOG00000027001) Naked mole-rat female MODERN SPECIES 22 ENSHGLG00000007865 ENSHGLG00000042945 ZNF330 (ENSHGLG00000000725) ENSHGLG00000048416 RNF150 (ENSHGLG00000000594) ENSHGLG00000049997 ENSHGLG00000001009 ENSHGLG00000044620 ENSHGLG00000048262 ENSHGLG00000000200 ENSHGLG00000000179 ENSHGLG00000000166 ELMOD2 (ENSHGLG00000043621) CLGN (ENSHGLG00000000153) ##21 SCOC (ENSHGLG00000035798) MAML3 (ENSHGLG00000039990) ##22 MGST2 (ENSHGLG00000040336) SETD7 (ENSHGLG00000039947) ENSHGLG00000049841 RAB33B (ENSHGLG00000038757) NAA15 (ENSHGLG00000007395) ENSHGLG00000006316 ENSHGLG00000037172 ENSHGLG00000005918 ENSHGLG00000038060 ELF2 (ENSHGLG00000039789) NOCT (ENSHGLG00000019383) ENSHGLG00000005811 SLC7A11 (ENSHGLG00000014666) ENSHGLG00000011287 ENSHGLG00000010507 Rodentia_B ANCESTRAL SPECIES 30 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Kangaroo rat MODERN SPECIES 438 ENSDORG00000016690 Hhip (ENSDORG00000016419) Smarca5 (ENSDORG00000003466) Gab1 (ENSDORG00000015902) Usp38 (ENSDORG00000004940) ENSDORG00000023817 Inpp4b (ENSDORG00000014154) Il15 (ENSDORG00000014153) Zfp330 (ENSDORG00000010322) Rnf150 (ENSDORG00000012239) Tbc1d9 (ENSDORG00000001961) Ucp1 (ENSDORG00000001952) Elmod2 (ENSDORG00000026741) Clgn (ENSDORG00000000175) ##21 Scoc (ENSDORG00000028512) ENSDORG00000009125 ##22 Mgst2 (ENSDORG00000009124) Setd7 (ENSDORG00000004857) Rab33b (ENSDORG00000023618) Naa15 (ENSDORG00000005486) Ndufc1 (ENSDORG00000005485) ENSDORG00000024633 Noct (ENSDORG00000000869) Slc7a11 (ENSDORG00000008559) Pcdh18 (ENSDORG00000001570) Myomorpha ANCESTRAL SPECIES 41 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Muroidea ANCESTRAL SPECIES 56 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00960000189829 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00390000006573 ENSGT00940000154391.a.b ENSGT00940000153481.C ENSGT00950000183130.B ENSGT00390000013549.a.a ENSGT00530000063860.b ENSGT01060000248594.e.b ENSGT00390000010391 ENSGT00940000155313 ENSGT01030000234614.B.a.a.b ENSGT00730000111188 ENSGT00390000008657 ENSGT00990000203589.a.b.a.a ENSGT00390000013518 ENSGT00940000161558 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Cricetidae ANCESTRAL SPECIES 6 ENSGT00390000006573 ENSGT00940000154391.a.b ENSGT00940000153481.C ENSGT00950000183130.B ENSGT00390000013549.a.a ENSGT00530000063860.b ENSGT01060000248594.e.b ENSGT00390000010391 ENSGT00940000155313 ENSGT01030000234614.B.a.a.b ENSGT00730000111188 ENSGT00390000008657 ENSGT00990000203589.a.b.a.a ENSGT00390000013518 ENSGT00940000161558 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Cricetinae ANCESTRAL SPECIES 13 ENSGT00390000006573 ENSGT00940000154391.a.b ENSGT00940000153481.C ENSGT00950000183130.B ENSGT00390000013549.a.a ENSGT00530000063860.b ENSGT01060000248594.e.b ENSGT00390000010391 ENSGT00940000155313 ENSGT01030000234614.B.a.a.b ENSGT00730000111188 ENSGT00390000008657 ENSGT00990000203589.a.b.a.a ENSGT00390000013518 ENSGT00940000161558 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Chinese hamster chok1gshd MODERN SPECIES 352 ENSCGRG00001022326 Exosc8 (ENSCGRG00001012262) Supt20 (ENSCGRG00001018857) Postn (ENSCGRG00001022267) Trpc4 (ENSCGRG00001022303) ENSCGRG00001016565 Ufm1 (ENSCGRG00001021178) Frem2 (ENSCGRG00001021708) Stoml3 (ENSCGRG00001010368) Proser1 (ENSCGRG00001018627) Nhlrc3 (ENSCGRG00001000190) ENSCGRG00001012241 Lhfp (ENSCGRG00001014062) Cog6 (ENSCGRG00001023122) Foxo1 (ENSCGRG00001010126) Maml3 (ENSCGRG00001013876) ##22 ENSCGRG00001015206 Mgst2 (ENSCGRG00001023658) Setd7 (ENSCGRG00001021541) Rab33b (ENSCGRG00001016897) ENSCGRG00001016024 Ndufc1 (ENSCGRG00001021397) Mgarp (ENSCGRG00001021913) Elf2 (ENSCGRG00001017608) Noct (ENSCGRG00001021050) ENSCGRG00001021385 ENSCGRG00001017707 Slc7a11 (ENSCGRG00001013535) Pcdh18 (ENSCGRG00001021760) Pabpc4l (ENSCGRG00001002070) Pcdh10 (ENSCGRG00001013755) Golden Hamster MODERN SPECIES 690 Rfxap (ENSMAUG00000003109) Smad9 (ENSMAUG00000007977) ENSMAUG00000013103 Exosc8 (ENSMAUG00000017812) ENSMAUG00000014984 Postn (ENSMAUG00000019919) Trpc4 (ENSMAUG00000001198) Ufm1 (ENSMAUG00000018178) ENSMAUG00000017869 Frem2 (ENSMAUG00000005257) Stoml3 (ENSMAUG00000007821) ENSMAUG00000004106 Nhlrc3 (ENSMAUG00000005924) Cog6 (ENSMAUG00000000435) Foxo1 (ENSMAUG00000000234) Maml3 (ENSMAUG00000001409) ##22 Mgst2 (ENSMAUG00000009690) Setd7 (ENSMAUG00000011555) Rab33b (ENSMAUG00000014030) ENSMAUG00000016687 Ndufc1 (ENSMAUG00000017283) Mgarp (ENSMAUG00000017626) ENSMAUG00000007960 ENSMAUG00000010499 Noct (ENSMAUG00000013688) Slc7a11 (ENSMAUG00000015486) Pcdh18 (ENSMAUG00000008607) Pkp2 (ENSMAUG00000010450) Yars2 (ENSMAUG00000012334) Dnm1l (ENSMAUG00000010409) Fgd4 (ENSMAUG00000009523) Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00390000006573 ENSGT00940000154391.a.b ENSGT00940000153481.C ENSGT00950000183130.B ENSGT00390000013549.a.a ENSGT00530000063860.b ENSGT01060000248594.e.b ENSGT00390000010391 ENSGT00940000155313 ENSGT01030000234614.B.a.a.b ENSGT00730000111188 ENSGT00390000008657 ENSGT00990000203589.a.b.a.a ENSGT00390000013518 ENSGT00940000161558 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Prairie vole MODERN SPECIES Alg5 (ENSMOCG00000015400) Exosc8 (ENSMOCG00000017293) ENSMOCG00000021184 Supt20 (ENSMOCG00000020757) Postn (ENSMOCG00000015092) Trpc4 (ENSMOCG00000022081) ENSMOCG00000008401 Ufm1 (ENSMOCG00000001316) Frem2 (ENSMOCG00000014700) Stoml3 (ENSMOCG00000009247) Proser1 (ENSMOCG00000001872) Nhlrc3 (ENSMOCG00000020191) Lhfp (ENSMOCG00000003780) Cog6 (ENSMOCG00000016621) Foxo1 (ENSMOCG00000020911) Maml3 (ENSMOCG00000019491) ##22 Mgst2 (ENSMOCG00000010904) Setd7 (ENSMOCG00000005547) Rab33b (ENSMOCG00000019866) Naa15 (ENSMOCG00000017390) Ndufc1 (ENSMOCG00000010546) Mgarp (ENSMOCG00000019900) ENSMOCG00000016521 Elf2 (ENSMOCG00000006447) Noct (ENSMOCG00000013676) Slc7a11 (ENSMOCG00000022163) Pcdh18 (ENSMOCG00000010974) ENSMOCG00000022370 ENSMOCG00000009837 Pabpc4l (ENSMOCG00000007551) ENSMOCG00000007049 Northern American deer mouse MODERN SPECIES 19 Alg5 (ENSPEMG00000010516) Exosc8 (ENSPEMG00000010801) ENSPEMG00000030633 Supt20 (ENSPEMG00000017347) Postn (ENSPEMG00000013782) Trpc4 (ENSPEMG00000009383) Ufm1 (ENSPEMG00000012238) ENSPEMG00000025612 Frem2 (ENSPEMG00000013398) Stoml3 (ENSPEMG00000016865) Proser1 (ENSPEMG00000017174) Nhlrc3 (ENSPEMG00000018137) Lhfp (ENSPEMG00000000258) Cog6 (ENSPEMG00000002808) ENSPEMG00000008190 Maml3 (ENSPEMG00000011661) ##22 Mgst2 (ENSPEMG00000013067) Setd7 (ENSPEMG00000014852) Rab33b (ENSPEMG00000029206) Naa15 (ENSPEMG00000018617) Ndufc1 (ENSPEMG00000014918) Mgarp (ENSPEMG00000016128) Elf2 (ENSPEMG00000027602) Noct (ENSPEMG00000016096) ENSPEMG00000000564 Slc7a11 (ENSPEMG00000004847) Pcdh18 (ENSPEMG00000008783) ENSPEMG00000014607 Ankrd50 (ENSPEMG00000000443) ENSPEMG00000028306 Spry1 (ENSPEMG00000030492) Murinae ANCESTRAL SPECIES 5 ENSGT00390000006573 ENSGT00940000154391.a.b ENSGT00940000153481.C ENSGT00950000183130.B ENSGT00390000013549.a.a ENSGT00530000063860.b ENSGT01060000248594.e.b ENSGT00390000010391 ENSGT00940000155313 ENSGT01030000234614.B.a.a.b ENSGT00730000111188 ENSGT00390000008657 ENSGT00990000203589.a.b.a.a ENSGT00390000013518 ENSGT00940000161558 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Mus ANCESTRAL SPECIES 7 ENSGT00390000006573 ENSGT00940000154391.a.b ENSGT00940000153481.C ENSGT00950000183130.B ENSGT00390000013549.a.a ENSGT00530000063860.b ENSGT01060000248594.e.b ENSGT00390000010391 ENSGT00940000155313 ENSGT01030000234614.B.a.a.b ENSGT00730000111188 ENSGT00390000008657 ENSGT00990000203589.a.b.a.a ENSGT00390000013518 ENSGT00940000161558 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Mus_A ANCESTRAL SPECIES 9 ENSGT00390000006573 ENSGT00940000154391.a.b ENSGT00940000153481.C ENSGT00950000183130.B ENSGT00390000013549.a.a ENSGT00530000063860.b ENSGT01060000248594.e.b ENSGT00390000010391 ENSGT00940000155313 ENSGT01030000234614.B.a.a.b ENSGT00730000111188 ENSGT00390000008657 ENSGT00990000203589.a.b.a.a ENSGT00390000013518 ENSGT00940000161558 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Mus_B ANCESTRAL SPECIES 8 ENSGT00390000006573 ENSGT00940000154391.a.b ENSGT00940000153481.C ENSGT00950000183130.B ENSGT00390000013549.a.a ENSGT00530000063860.b ENSGT01060000248594.e.b ENSGT00390000010391 ENSGT00940000155313 ENSGT01030000234614.B.a.a.b ENSGT00730000111188 ENSGT00390000008657 ENSGT00990000203589.a.b.a.a ENSGT00390000013518 ENSGT00940000161558 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Mus_C ANCESTRAL SPECIES 6 ENSGT00390000006573 ENSGT00940000154391.a.b ENSGT00940000153481.C ENSGT00950000183130.B ENSGT00390000013549.a.a ENSGT00530000063860.b ENSGT01060000248594.e.b ENSGT00390000010391 ENSGT00940000155313 ENSGT01030000234614.B.a.a.b ENSGT00730000111188 ENSGT00390000008657 ENSGT00990000203589.a.b.a.a ENSGT00390000013518 ENSGT00940000161558 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000163344 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 spretus MODERN SPECIES 12 Smad9 (MGP_SPRETEiJ_G0025929) Alg5 (MGP_SPRETEiJ_G0025928) Exosc8 (MGP_SPRETEiJ_G0025927) MGP_SPRETEiJ_G0025926 Supt20 (MGP_SPRETEiJ_G0025925) Postn (MGP_SPRETEiJ_G0025924) Trpc4 (MGP_SPRETEiJ_G0025923) MGP_SPRETEiJ_G0025922 Frem2 (MGP_SPRETEiJ_G0025921) Stoml3 (MGP_SPRETEiJ_G0025920) Proser1 (MGP_SPRETEiJ_G0025919) Nhlrc3 (MGP_SPRETEiJ_G0025918) Lhfp (MGP_SPRETEiJ_G0025917) Cog6 (MGP_SPRETEiJ_G0025916) Foxo1 (MGP_SPRETEiJ_G0025915) Maml3 (MGP_SPRETEiJ_G0025914) ##22 MGP_SPRETEiJ_G0025913 Setd7 (MGP_SPRETEiJ_G0025912) Rab33b (MGP_SPRETEiJ_G0025911) Naa15 (MGP_SPRETEiJ_G0025910) Ndufc1 (MGP_SPRETEiJ_G0025909) Mgarp (MGP_SPRETEiJ_G0025908) Elf2 (MGP_SPRETEiJ_G0025907) Noct (MGP_SPRETEiJ_G0025906) Slc7a11 (MGP_SPRETEiJ_G0025905) Pcdh18 (MGP_SPRETEiJ_G0025904) Pabpc4l (MGP_SPRETEiJ_G0025903) Pcdh10 (MGP_SPRETEiJ_G0025902) D3Ertd751e (MGP_SPRETEiJ_G0025901) Sclt1 (MGP_SPRETEiJ_G0025900) Jade1 (MGP_SPRETEiJ_G0025899) Steppe mouse MODERN SPECIES 3328 Supt20 (ENSMSIG00000011522) ENSMSIG00000011604 Postn (ENSMSIG00000011621) Trpc4 (ENSMSIG00000011761) Ufm1 (ENSMSIG00000011781) Gm10985 (ENSMSIG00000011807) ENSMSIG00000011836 Frem2 (ENSMSIG00000011850) Stoml3 (ENSMSIG00000011881) Proser1 (ENSMSIG00000011889) Nhlrc3 (ENSMSIG00000011909) Lhfp (ENSMSIG00000011969) Cog6 (ENSMSIG00000011986) ENSMSIG00000012139 Foxo1 (ENSMSIG00000012146) Maml3 (ENSMSIG00000012162) ##22 ENSMSIG00000012216 ENSMSIG00000012224 Setd7 (ENSMSIG00000012236) Rab33b (ENSMSIG00000012280) Naa15 (ENSMSIG00000012304) ENSMSIG00000012393 Mgarp (ENSMSIG00000012425) Elf2 (ENSMSIG00000012468) Noct (ENSMSIG00000012523) Mouse MODERN SPECIES 12 Smad9 (ENSMUSG00000027796) Alg5 (ENSMUSG00000036632) Exosc8 (ENSMUSG00000027752) Supt20 (ENSMUSG00000027751) Postn (ENSMUSG00000027750) Trpc4 (ENSMUSG00000027748) Ufm1 (ENSMUSG00000027746) Gm10985 (ENSMUSG00000078742) Frem2 (ENSMUSG00000037016) Stoml3 (ENSMUSG00000027744) Proser1 (ENSMUSG00000049504) Nhlrc3 (ENSMUSG00000042997) Lhfp (ENSMUSG00000048332) Cog6 (ENSMUSG00000027742) Foxo1 (ENSMUSG00000044167) Maml3 (ENSMUSG00000061143) ##22 Mgst2 (ENSMUSG00000074604) Setd7 (ENSMUSG00000037111) Rab33b (ENSMUSG00000027739) Naa15 (ENSMUSG00000063273) Ndufc1 (ENSMUSG00000037152) Mgarp (ENSMUSG00000037161) Elf2 (ENSMUSG00000037174) Noct (ENSMUSG00000023087) Slc7a11 (ENSMUSG00000027737) Pcdh18 (ENSMUSG00000037892) Pabpc4l (ENSMUSG00000090919) Pcdh10 (ENSMUSG00000049100) D3Ertd751e (ENSMUSG00000025766) Sclt1 (ENSMUSG00000059834) Jade1 (ENSMUSG00000025764) Ryukyu mouse MODERN SPECIES 12 Smad9 (MGP_CAROLIEiJ_G0024994) Alg5 (MGP_CAROLIEiJ_G0024993) Exosc8 (MGP_CAROLIEiJ_G0024992) MGP_CAROLIEiJ_G0024991 Supt20 (MGP_CAROLIEiJ_G0024990) Postn (MGP_CAROLIEiJ_G0024989) Trpc4 (MGP_CAROLIEiJ_G0024988) MGP_CAROLIEiJ_G0024987 Frem2 (MGP_CAROLIEiJ_G0024986) Stoml3 (MGP_CAROLIEiJ_G0024985) Proser1 (MGP_CAROLIEiJ_G0024984) Nhlrc3 (MGP_CAROLIEiJ_G0024983) Lhfp (MGP_CAROLIEiJ_G0024982) Cog6 (MGP_CAROLIEiJ_G0024981) Foxo1 (MGP_CAROLIEiJ_G0024980) Maml3 (MGP_CAROLIEiJ_G0024979) ##22 Mgst2 (MGP_CAROLIEiJ_G0024978) Setd7 (MGP_CAROLIEiJ_G0024977) Rab33b (MGP_CAROLIEiJ_G0024976) Naa15 (MGP_CAROLIEiJ_G0024975) Ndufc1 (MGP_CAROLIEiJ_G0024974) Mgarp (MGP_CAROLIEiJ_G0024973) Elf2 (MGP_CAROLIEiJ_G0024972) Noct (MGP_CAROLIEiJ_G0024971) Slc7a11 (MGP_CAROLIEiJ_G0024970) Pcdh18 (MGP_CAROLIEiJ_G0024969) Pabpc4l (MGP_CAROLIEiJ_G0024968) Pcdh10 (MGP_CAROLIEiJ_G0024967) D3Ertd751e (MGP_CAROLIEiJ_G0024966) Sclt1 (MGP_CAROLIEiJ_G0024965) Jade1 (MGP_CAROLIEiJ_G0024964) Shrew mouse MODERN SPECIES 17 Smad9 (MGP_PahariEiJ_G0026435) Alg5 (MGP_PahariEiJ_G0026434) Exosc8 (MGP_PahariEiJ_G0026433) MGP_PahariEiJ_G0026432 Supt20 (MGP_PahariEiJ_G0026431) Postn (MGP_PahariEiJ_G0026430) Trpc4 (MGP_PahariEiJ_G0026429) Ufm1 (MGP_PahariEiJ_G0026428) Frem2 (MGP_PahariEiJ_G0026427) Stoml3 (MGP_PahariEiJ_G0026426) Proser1 (MGP_PahariEiJ_G0026425) Nhlrc3 (MGP_PahariEiJ_G0026424) Lhfp (MGP_PahariEiJ_G0026423) Cog6 (MGP_PahariEiJ_G0026422) Foxo1 (MGP_PahariEiJ_G0026421) Maml3 (MGP_PahariEiJ_G0026420) ##22 MGP_PahariEiJ_G0026419 Setd7 (MGP_PahariEiJ_G0026418) Rab33b (MGP_PahariEiJ_G0026417) Naa15 (MGP_PahariEiJ_G0026416) Ndufc1 (MGP_PahariEiJ_G0026415) Mgarp (MGP_PahariEiJ_G0026414) Elf2 (MGP_PahariEiJ_G0026413) Noct (MGP_PahariEiJ_G0026412) Slc7a11 (MGP_PahariEiJ_G0026411) Pcdh18 (MGP_PahariEiJ_G0026410) Pabpc4l (MGP_PahariEiJ_G0026409) Pcdh10 (MGP_PahariEiJ_G0026408) D3Ertd751e (MGP_PahariEiJ_G0026407) Sclt1 (MGP_PahariEiJ_G0026406) Jade1 (MGP_PahariEiJ_G0026405) Rat MODERN SPECIES 11 Exosc8 (ENSRNOG00000051623) Supt20h (ENSRNOG00000059480) Rexo1l1-ps1 (ENSRNOG00000061707) Dusp14l1 (ENSRNOG00000046368) Postn (ENSRNOG00000012660) Trpc4 (ENSRNOG00000011133) Frem2 (ENSRNOG00000021670) Stoml3 (ENSRNOG00000011006) Proser1 (ENSRNOG00000010980) Nhlrc3 (ENSRNOG00000010843) Nhlrc3 (ENSRNOG00000070230) Lhfpl6 (ENSRNOG00000014153) Cog6 (ENSRNOG00000013660) Foxo1 (ENSRNOG00000013397) ENSRNOG00000068600 Maml3 (ENSRNOG00000067338) ##22 Mgst2 (ENSRNOG00000061857) Setd7 (ENSRNOG00000013045) Rab33b (ENSRNOG00000013035) Naa15 (ENSRNOG00000012385) Ndufc1 (ENSRNOG00000070835) Mgarp (ENSRNOG00000011923) Elf2 (ENSRNOG00000010815) Noct (ENSRNOG00000010799) Slc7a11 (ENSRNOG00000010210) Pcdh18 (ENSRNOG00000009949) LOC120100815 (ENSRNOG00000066067) LOC120093152 (ENSRNOG00000038242) LOC102550446 (ENSRNOG00000065262) LOC365791 (ENSRNOG00000069904) LOC120100814 (ENSRNOG00000069607) Upper Galilee mountains blind mole rat MODERN SPECIES 1233 Smarca5 (ENSNGAG00000000441) Gab1 (ENSNGAG00000015926) Usp38 (ENSNGAG00000020013) ENSNGAG00000017839 Inpp4b (ENSNGAG00000004652) ENSNGAG00000003516 Zfp330 (ENSNGAG00000004253) ENSNGAG00000001858 Rnf150 (ENSNGAG00000018575) Tbc1d9 (ENSNGAG00000007389) Ucp1 (ENSNGAG00000003442) Elmod2 (ENSNGAG00000001153) Mgat4d (ENSNGAG00000019938) Clgn (ENSNGAG00000013400) ##21 Scoc (ENSNGAG00000011163) Maml3 (ENSNGAG00000020253) ##22 Mgst2 (ENSNGAG00000017878) ENSNGAG00000016240 Rab33b (ENSNGAG00000015807) Naa15 (ENSNGAG00000020578) Ndufc1 (ENSNGAG00000019599) ENSNGAG00000015210 Elf2 (ENSNGAG00000011982) Noct (ENSNGAG00000010135) Lesser Egyptian jerboa MODERN SPECIES 57 ENSJJAG00000020665 Ttc29 (ENSJJAG00000021357) Ednra (ENSJJAG00000019465) ENSJJAG00000016555 Smarca5 (ENSJJAG00000014965) Gab1 (ENSJJAG00000023862) ENSJJAG00000017034 Inpp4b (ENSJJAG00000011391) Il15 (ENSJJAG00000000182) ENSJJAG00000023235 Rnf150 (ENSJJAG00000016691) Tbc1d9 (ENSJJAG00000012857) Ucp1 (ENSJJAG00000019452) Elmod2 (ENSJJAG00000018795) Mgat4d (ENSJJAG00000009209) Maml3 (ENSJJAG00000021946) ##22 Mgst2 (ENSJJAG00000009542) Setd7 (ENSJJAG00000006328) Rab33b (ENSJJAG00000023756) Elf2 (ENSJJAG00000001703) Noct (ENSJJAG00000019776) ENSJJAG00000009525 Slc7a11 (ENSJJAG00000011019) Pcdh18 (ENSJJAG00000020379) ENSJJAG00000018016 Pabpc4l (ENSJJAG00000004090) ENSJJAG00000024153 Pcdh10 (ENSJJAG00000000168) ENSJJAG00000011585 D3Ertd751e (ENSJJAG00000013337) Sclt1 (ENSJJAG00000023270) Atlantogenata ANCESTRAL SPECIES 49 ENSGT00940000158660 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 Afrotheria ANCESTRAL SPECIES 43 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 Afrotheria_a ANCESTRAL SPECIES 41 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 Elephant MODERN SPECIES 95 TBC1D9 (ENSLAFG00000001318) UCP1 (ENSLAFG00000007077) ELMOD2 (ENSLAFG00000007074) MGAT4D (ENSLAFG00000004388) CLGN (ENSLAFG00000018076) ##21 SCOC (ENSLAFG00000018075) ENSLAFG00000025689 MAML3 (ENSLAFG00000027199) ##22 MGST2 (ENSLAFG00000005558) SETD7 (ENSLAFG00000011095) RAB33B (ENSLAFG00000022351) NAA15 (ENSLAFG00000002574) ENSLAFG00000010459 ENSLAFG00000013172 ELF2 (ENSLAFG00000017189) NOCT (ENSLAFG00000017184) SLC7A11 (ENSLAFG00000017422) PCDH18 (ENSLAFG00000005319) PCDH10 (ENSLAFG00000014244) ENSLAFG00000026294 C4orf33 (ENSLAFG00000017212) SCLT1 (ENSLAFG00000001020) JADE1 (ENSLAFG00000001017) Hyrax MODERN SPECIES 7630 MAML3 (ENSPCAG00000015901) ##22 ENSPCAG00000015867 Tenrec MODERN SPECIES 9129 MAML3 (ENSETEG00000001036) ##22 MGST2 (ENSETEG00000001033) Xenarthra ANCESTRAL SPECIES 87 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 Armadillo MODERN SPECIES 2885 SMARCA5 (ENSDNOG00000009158) GAB1 (ENSDNOG00000019599) ENSDNOG00000045535 USP38 (ENSDNOG00000043607) INPP4B (ENSDNOG00000046642) IL15 (ENSDNOG00000034678) ENSDNOG00000041774 ZNF330 (ENSDNOG00000048527) RNF150 (ENSDNOG00000038812) TBC1D9 (ENSDNOG00000005384) ELMOD2 (ENSDNOG00000035842) ENSDNOG00000038747 CLGN (ENSDNOG00000004054) ##21 SCOC (ENSDNOG00000030600) ENSDNOG00000046815 ##22 MAML3 (ENSDNOG00000002937) ##22 MGST2 (ENSDNOG00000034606) SETD7 (ENSDNOG00000037968) RAB33B (ENSDNOG00000005253) NAA15 (ENSDNOG00000037740) ENSDNOG00000001984 MGARP (ENSDNOG00000033335) ENSDNOG00000049203 ENSDNOG00000039348 ELF2 (ENSDNOG00000047868) NOCT (ENSDNOG00000036912) ENSDNOG00000044938 ENSDNOG00000032621 SLC7A11 (ENSDNOG00000011228) PCDH18 (ENSDNOG00000044279) Sloth MODERN SPECIES 8097 MAML3 (ENSCHOG00000008097) ##22 MGST2 (ENSCHOG00000008082) Marsupialia ANCESTRAL SPECIES 7 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Marsupialia_b ANCESTRAL SPECIES 8 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171.d ENSGT00940000156171.c ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000168767 ENSGT00940000158277 ENSGT00390000006284 Tasmanian devil MODERN SPECIES 5 HHIP (ENSSHAG00000011890) ENSSHAG00000007475 SMARCA5 (ENSSHAG00000008464) GAB1 (ENSSHAG00000009133) USP38 (ENSSHAG00000011121) INPP4B (ENSSHAG00000015055) IL15 (ENSSHAG00000023836) ZNF330 (ENSSHAG00000032038) RNF150 (ENSSHAG00000028359) TBC1D9 (ENSSHAG00000024926) UCP1 (ENSSHAG00000026436) ELMOD2 (ENSSHAG00000018184) ENSSHAG00000001841 CLGN (ENSSHAG00000001719) ##21 SCOC (ENSSHAG00000003474) MAML3 (ENSSHAG00000030735) ##22 MGST2 (ENSSHAG00000026843) SETD7 (ENSSHAG00000000798) RAB33B (ENSSHAG00000023446) ENSSHAG00000004271 NAA15 (ENSSHAG00000005053) ENSSHAG00000006642 ENSSHAG00000021462 ELF2 (ENSSHAG00000002684) NOCT (ENSSHAG00000021061) SLC7A11 (ENSSHAG00000012376) PCDH18 (ENSSHAG00000015323) ENSSHAG00000017845 PCDH10 (ENSSHAG00000021962) ENSSHAG00000026770 ENSSHAG00000028697 Diprotodontia ANCESTRAL SPECIES 53 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171.d ENSGT00940000156171.c ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 Wallaby MODERN SPECIES 9671 MAML3 (ENSMEUG00000013112) ##22 Diprotodontia_a ANCESTRAL SPECIES 50 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171.d ENSGT00940000156171.c ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 Common wonbat MODERN SPECIES 1022 ENSVURG00010010267 SMARCA5 (ENSVURG00010010208) GAB1 (ENSVURG00010010165) USP38 (ENSVURG00010010143) INPP4B (ENSVURG00010010079) IL15 (ENSVURG00010010052) ZNF330 (ENSVURG00010010035) ENSVURG00010010021 RNF150 (ENSVURG00010009942) TBC1D9 (ENSVURG00010009910) UCP1 (ENSVURG00010009888) ELMOD2 (ENSVURG00010009881) ENSVURG00010009862 CLGN (ENSVURG00010009814) ##21 SCOC (ENSVURG00010009766) MAML3 (ENSVURG00010009748) ##22 MGST2 (ENSVURG00010009730) koala DUPLICATION koala MODERN SPECIES 426 ENSPCIG00000001043 ##22 ENSPCIG00000006501 ENSPCIG00000006496 ##22 MGST2 (ENSPCIG00000034237) ENSPCIG00000032299 ENSPCIG00000035560 koala MODERN SPECIES 426 ENSPCIG00000001043 ##22 ENSPCIG00000006501 ENSPCIG00000006496 ##22 MGST2 (ENSPCIG00000034237) ENSPCIG00000032299 ENSPCIG00000035560 Opossum DUPLICATION Opossum MODERN SPECIES 4 ENSMODG00000000417 SMARCA5 (ENSMODG00000000391) GAB1 (ENSMODG00000000336) USP38 (ENSMODG00000000319) ENSMODG00000029399 INPP4B (ENSMODG00000000308) IL15 (ENSMODG00000041399) ZNF330 (ENSMODG00000000223) TBC1D9 (ENSMODG00000000209) UCP1 (ENSMODG00000000172) ELMOD2 (ENSMODG00000024910) ENSMODG00000025527 CLGN (ENSMODG00000000160) ##21 SCOC (ENSMODG00000025528) ENSMODG00000038155 ##22 ENSMODG00000051069 ##22 MGST2 (ENSMODG00000025529) SETD7 (ENSMODG00000000122) RAB33B (ENSMODG00000044810) ENSMODG00000000115 NAA15 (ENSMODG00000000107) NDUFC1 (ENSMODG00000000098) ENSMODG00000025548 ELF2 (ENSMODG00000000089) NOCT (ENSMODG00000000087) ENSMODG00000000053 PCDH18 (ENSMODG00000000040) ENSMODG00000051597 ENSMODG00000024902 ENSMODG00000000023 ENSMODG00000000016 Opossum MODERN SPECIES 4 ENSMODG00000027513 ENSMODG00000000417 SMARCA5 (ENSMODG00000000391) GAB1 (ENSMODG00000000336) USP38 (ENSMODG00000000319) ENSMODG00000029399 INPP4B (ENSMODG00000000308) IL15 (ENSMODG00000041399) ZNF330 (ENSMODG00000000223) TBC1D9 (ENSMODG00000000209) UCP1 (ENSMODG00000000172) ELMOD2 (ENSMODG00000024910) ENSMODG00000025527 CLGN (ENSMODG00000000160) ##21 SCOC (ENSMODG00000025528) ENSMODG00000038155 ##22 ENSMODG00000051069 ##22 MGST2 (ENSMODG00000025529) SETD7 (ENSMODG00000000122) RAB33B (ENSMODG00000044810) ENSMODG00000000115 NAA15 (ENSMODG00000000107) NDUFC1 (ENSMODG00000000098) ENSMODG00000025548 ELF2 (ENSMODG00000000089) NOCT (ENSMODG00000000087) ENSMODG00000000053 PCDH18 (ENSMODG00000000040) ENSMODG00000051597 ENSMODG00000024902 ENSMODG00000000023 Sauria ANCESTRAL SPECIES 6 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT01030000234904 ENSGT00390000006284 Archelosauria ANCESTRAL SPECIES 4 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT01030000234904 ENSGT00390000006284 Cryptodira ANCESTRAL SPECIES 2 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Testudinoidea ANCESTRAL SPECIES 10 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827.f ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Emydidae ANCESTRAL SPECIES 1 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827.f ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 painted turtle MODERN SPECIES 15 ANAPC10 (ENSCPBG00000027509) HHIP (ENSCPBG00000027513) FREM3 (ENSCPBG00000027528) SMARCA5 (ENSCPBG00000027535) GAB1 (ENSCPBG00000027537) USP38 (ENSCPBG00000027545) INPP4B (ENSCPBG00000027550) IL15 (ENSCPBG00000027557) ZNF330 (ENSCPBG00000027560) RNF150 (ENSCPBG00000027562) TBC1D9 (ENSCPBG00000027565) ELMOD2 (ENSCPBG00000027570) MGAT4D (ENSCPBG00000027573) CLGN (ENSCPBG00000027583) ##21 SCOC (ENSCPBG00000027587) MAML3 (ENSCPBG00000027593) ##22 MGST2 (ENSCPBG00000027595) ENSCPBG00000027597 ENSCPBG00000027600 ENSCPBG00000027603 RAB33B (ENSCPBG00000027605) NAA15 (ENSCPBG00000027608) ENSCPBG00000027617 ENSCPBG00000027620 ELF2 (ENSCPBG00000027621) NOCT (ENSCPBG00000027624) SLC7A11 (ENSCPBG00000027632) PCDH18 (ENSCPBG00000027647) ENSCPBG00000027650 ENSCPBG00000027651 CASTOR2 (ENSCPBG00000027656) Three-toed box turtle MODERN SPECIES 26 ANAPC10 (ENSTMTG00000015504) HHIP (ENSTMTG00000015480) FREM3 (ENSTMTG00000015372) SMARCA5 (ENSTMTG00000014596) GAB1 (ENSTMTG00000014459) USP38 (ENSTMTG00000014430) ENSTMTG00000014412 INPP4B (ENSTMTG00000014224) ZNF330 (ENSTMTG00000014189) RNF150 (ENSTMTG00000014159) TBC1D9 (ENSTMTG00000014126) ELMOD2 (ENSTMTG00000014113) MGAT4D (ENSTMTG00000014087) CLGN (ENSTMTG00000014052) ##21 SCOC (ENSTMTG00000014037) MAML3 (ENSTMTG00000013990) ##22 MGST2 (ENSTMTG00000013972) SETD7 (ENSTMTG00000013940) RAB33B (ENSTMTG00000013931) NAA15 (ENSTMTG00000013916) ENSTMTG00000013908 MGARP (ENSTMTG00000013896) ELF2 (ENSTMTG00000013869) NOCT (ENSTMTG00000013858) SLC7A11 (ENSTMTG00000013837) PCDH18 (ENSTMTG00000013828) PCDH10 (ENSTMTG00000013824) ENSTMTG00000013786 C4orf33 (ENSTMTG00000013774) SCLT1 (ENSTMTG00000013669) JADE1 (ENSTMTG00000013599) Testudinidae ANCESTRAL SPECIES 11 ENSGT00390000015089 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827.f ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Abingdon island giant tortoise MODERN SPECIES 2280 MAML3 (ENSCABG00000002989) ##22 MGST2 (ENSCABG00000002993) SETD7 (ENSCABG00000002996) RAB33B (ENSCABG00000003002) NAA15 (ENSCABG00000003004) ENSCABG00000003006 MGARP (ENSCABG00000003008) ENSCABG00000003009 ELF2 (ENSCABG00000003013) NOCT (ENSCABG00000003016) SLC7A11 (ENSCABG00000003023) Goode s thornscrub tortoise MODERN SPECIES 19 ABCE1 (ENSGEVG00005017122) ANAPC10 (ENSGEVG00005017200) HHIP (ENSGEVG00005017239) SMARCA5 (ENSGEVG00005017294) GAB1 (ENSGEVG00005017331) USP38 (ENSGEVG00005017374) INPP4B (ENSGEVG00005017601) IL15 (ENSGEVG00005009098) ZNF330 (ENSGEVG00005009148) RNF150 (ENSGEVG00005009199) TBC1D9 (ENSGEVG00005009367) ELMOD2 (ENSGEVG00005009880) MGAT4D (ENSGEVG00005009968) CLGN (ENSGEVG00005010013) ##21 SCOC (ENSGEVG00005010044) MAML3 (ENSGEVG00005010075) ##22 MGST2 (ENSGEVG00005010172) SETD7 (ENSGEVG00005010230) RAB33B (ENSGEVG00005010260) NAA15 (ENSGEVG00005010283) ENSGEVG00005010322 MGARP (ENSGEVG00005010337) ELF2 (ENSGEVG00005010370) NOCT (ENSGEVG00005010413) SLC7A11 (ENSGEVG00005010456) PCDH18 (ENSGEVG00005010708) PCDH10 (ENSGEVG00005010879) ENSGEVG00005010945 C4orf33 (ENSGEVG00005011103) SCLT1 (ENSGEVG00005011140) JADE1 (ENSGEVG00005011237) Chinese turtle MODERN SPECIES 1165 ENSPSIG00000000404 DIPK2A (ENSPSIG00000016174) ENSPSIG00000016225 ENSPSIG00000016413 CHST2 (ENSPSIG00000016466) U2SURP (ENSPSIG00000016578) PAQR9 (ENSPSIG00000000411) PCOLCE2 (ENSPSIG00000017254) TRPC1 (ENSPSIG00000017273) PLS1 (ENSPSIG00000017601) ATR (ENSPSIG00000017887) XRN1 (ENSPSIG00000018050) GK5 (ENSPSIG00000007285) TFDP2 (ENSPSIG00000007519) ATP1B3 (ENSPSIG00000007680) MAML3 (ENSPSIG00000007856) ##22 MGST2 (ENSPSIG00000007863) ENSPSIG00000007868 SETD7 (ENSPSIG00000007889) ENSPSIG00000007894 ENSPSIG00000008015 ARPP21 (ENSPSIG00000009255) STAC (ENSPSIG00000009698) DCLK3 (ENSPSIG00000010108) TRANK1 (ENSPSIG00000010217) MLH1 (ENSPSIG00000010283) LRRFIP2 (ENSPSIG00000011795) GOLGA4 (ENSPSIG00000012046) ITGA9 (ENSPSIG00000012373) NEUROD6 (ENSPSIG00000000416) ITPRID1 (ENSPSIG00000013853) Archosauria ANCESTRAL SPECIES 1 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT01030000234904 ENSGT00390000006284 ENSGT00730000111168 Australian saltwater crocodile MODERN SPECIES 33 FREM3 (ENSCPRG00005008470) SMARCA5 (ENSCPRG00005008447) GAB1 (ENSCPRG00005008432) USP38 (ENSCPRG00005008402) ENSCPRG00005008392 INPP4B (ENSCPRG00005008369) IL15 (ENSCPRG00005008351) ZNF330 (ENSCPRG00005008341) RNF150 (ENSCPRG00005008334) TBC1D9 (ENSCPRG00005008297) ELMOD2 (ENSCPRG00005008282) ENSCPRG00005008274 MGAT4D (ENSCPRG00005008225) CLGN (ENSCPRG00005008203) ##21 SCOC (ENSCPRG00005008197) MAML3 (ENSCPRG00005008174) ##22 MGST2 (ENSCPRG00005008169) SETD7 (ENSCPRG00005008154) RAB33B (ENSCPRG00005008151) NAA15 (ENSCPRG00005008142) ELF2 (ENSCPRG00005008123) NOCT (ENSCPRG00005008118) SLC7A11 (ENSCPRG00005007667) PCDH18 (ENSCPRG00005007637) Aves ANCESTRAL SPECIES 3 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT01030000234904 ENSGT00390000006284 ENSGT00730000111168 African ostrich MODERN SPECIES 1080 ANAPC10 (ENSSCUG00000016484) HHIP (ENSSCUG00000016498) FREM3 (ENSSCUG00000016516) SMARCA5 (ENSSCUG00000016528) ENSSCUG00000016537 USP38 (ENSSCUG00000016550) INPP4B (ENSSCUG00000016573) IL15 (ENSSCUG00000016583) ZNF330 (ENSSCUG00000016586) RNF150 (ENSSCUG00000016590) TBC1D9 (ENSSCUG00000016598) ELMOD2 (ENSSCUG00000016613) MGAT4D (ENSSCUG00000016615) CLGN (ENSSCUG00000016617) ##21 SCOC (ENSSCUG00000016619) MAML3 (ENSSCUG00000016623) ##22 MGST2 (ENSSCUG00000016624) SETD7 (ENSSCUG00000016627) ENSSCUG00000016628 RAB33B (ENSSCUG00000016629) NAA15 (ENSSCUG00000016631) ENSSCUG00000016635 ELF2 (ENSSCUG00000016638) NOCT (ENSSCUG00000016641) SLC7A11 (ENSSCUG00000016644) PCDH18 (ENSSCUG00000014835) ENSSCUG00000014866 ENSSCUG00000014868 C4orf33 (ENSSCUG00000014914) SCLT1 (ENSSCUG00000014922) JADE1 (ENSSCUG00000014942) Neognathae ANCESTRAL SPECIES 5 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT01030000234904 ENSGT00390000006284 ENSGT00730000111168 Galloanserae ANCESTRAL SPECIES 5 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT01030000234904 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Anatidae ANCESTRAL SPECIES 2 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT01030000234904 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Pink-footed goose MODERN SPECIES 122 SMARCA5 (ENSABRG00000014923) GAB1 (ENSABRG00000014918) USP38 (ENSABRG00000014917) ENSABRG00000014915 INPP4B (ENSABRG00000014770) IL15 (ENSABRG00000014724) ZNF330 (ENSABRG00000014702) RNF150 (ENSABRG00000014668) TBC1D9 (ENSABRG00000014115) ENSABRG00000014042 ENSABRG00000014035 MGAT4D (ENSABRG00000014024) CLGN (ENSABRG00000013894) ##21 SCOC (ENSABRG00000013854) MAML3 (ENSABRG00000013850) ##22 MGST2 (ENSABRG00000013826) SETD7 (ENSABRG00000013691) RAB33B (ENSABRG00000013651) NAA15 (ENSABRG00000012922) ELF2 (ENSABRG00000012711) NOCT (ENSABRG00000012689) SLC7A11 (ENSABRG00000012645) PCDH18 (ENSABRG00000012637) Duck MODERN SPECIES 22 ANAPC10 (ENSAPLG00000010264) HHIP (ENSAPLG00000009975) ENSAPLG00000029085 SMARCA5 (ENSAPLG00000009206) GAB1 (ENSAPLG00000008645) USP38 (ENSAPLG00000019928) INPP4B (ENSAPLG00000008033) IL15 (ENSAPLG00000004865) ZNF330 (ENSAPLG00000009489) RNF150 (ENSAPLG00000009408) TBC1D9 (ENSAPLG00000008419) ELMOD2 (ENSAPLG00000008211) MGAT4D (ENSAPLG00000007550) CLGN (ENSAPLG00000007372) ##21 SCOC (ENSAPLG00000023909) MAML3 (ENSAPLG00000007272) ##22 MGST2 (ENSAPLG00000007262) SETD7 (ENSAPLG00000007008) ENSAPLG00000027541 RAB33B (ENSAPLG00000022797) NAA15 (ENSAPLG00000006263) MGARP (ENSAPLG00000025584) ELF2 (ENSAPLG00000014003) NOCT (ENSAPLG00000026879) SLC7A11 (ENSAPLG00000014089) PCDH18 (ENSAPLG00000014396) ENSAPLG00000017392 PCDH10 (ENSAPLG00000020479) ENSAPLG00000017453 C4orf33 (ENSAPLG00000014754) SCLT1 (ENSAPLG00000014774) Phasianidae ANCESTRAL SPECIES 2 ENSGT00390000015089 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT01030000234904 ENSGT00940000158277 ENSGT00940000157620 ENSGT00940000155875 ENSGT00940000158460 Phasianidae_b ANCESTRAL SPECIES 4 ENSGT00390000015089 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT01030000234904 ENSGT00940000158277 ENSGT00940000157620 ENSGT00940000155875 ENSGT00940000158460 ENSGT00940000153763.b Chicken MODERN SPECIES 33 ABCE1 (ENSGALG00010006353) HHIP (ENSGALG00010006341) ANAPC10 (ENSGALG00010006323) SMARCA5 (ENSGALG00010009411) GAB1 (ENSGALG00010007898) USP38 (ENSGALG00010007885) INPP4B (ENSGALG00010009381) IL15 (ENSGALG00010009362) ZNF330 (ENSGALG00010009337) RNF150 (ENSGALG00010009323) TBC1D9 (ENSGALG00010009306) ELMOD2 (ENSGALG00010009279) MGAT4D (ENSGALG00010009259) CLGN (ENSGALG00010009166) ##21 SCOC (ENSGALG00010009127) MAML3 (ENSGALG00010009141) ##22 MGST2 (ENSGALG00010010107) SETD7 (ENSGALG00010009114) ENSGALG00010009109 RAB33B (ENSGALG00010008534) NAA15 (ENSGALG00010010037) ENSGALG00010008509 ENSGALG00010008500 ELF2 (ENSGALG00010010009) NOCT (ENSGALG00010008469) SLC7A11 (ENSGALG00010008444) ENSGALG00010008003 PCDH18 (ENSGALG00010009234) ENSGALG00010009222 PCDH10 (ENSGALG00010009214) ENSGALG00010009184 Turkey MODERN SPECIES 24 ANAPC10 (ENSMGAG00000003629) HHIP (ENSMGAG00000003569) SMARCA5 (ENSMGAG00000003517) GAB1 (ENSMGAG00000003485) USP38 (ENSMGAG00000003451) INPP4B (ENSMGAG00000003288) IL15 (ENSMGAG00000003247) ZNF330 (ENSMGAG00000003187) RNF150 (ENSMGAG00000003272) TBC1D9 (ENSMGAG00000003086) ELMOD2 (ENSMGAG00000003053) ENSMGAG00000019878 MGAT4D (ENSMGAG00000002979) CLGN (ENSMGAG00000002949) ##21 SCOC (ENSMGAG00000002939) MAML3 (ENSMGAG00000002925) ##22 MGST2 (ENSMGAG00000002920) SETD7 (ENSMGAG00000002907) ENSMGAG00000002901 RAB33B (ENSMGAG00000002900) NAA15 (ENSMGAG00000002831) ENSMGAG00000022293 ELF2 (ENSMGAG00000002791) NOCT (ENSMGAG00000002778) SLC7A11 (ENSMGAG00000002726) PCDH18 (ENSMGAG00000002703) ENSMGAG00000018383 CBR4 (ENSMGAG00000002684) SH3RF1 (ENSMGAG00000002651) NEK1 (ENSMGAG00000017234) CLCN3 (ENSMGAG00000002509) Japanese quail MODERN SPECIES 22 ANAPC10 (ENSCJPG00005001761) HHIP (ENSCJPG00005001754) ENSCJPG00005001744 SMARCA5 (ENSCJPG00005001731) GAB1 (ENSCJPG00005001717) USP38 (ENSCJPG00005001552) INPP4B (ENSCJPG00005001499) IL15 (ENSCJPG00005001485) ZNF330 (ENSCJPG00005001476) RNF150 (ENSCJPG00005001471) TBC1D9 (ENSCJPG00005001456) ELMOD2 (ENSCJPG00005001450) MGAT4D (ENSCJPG00005001445) CLGN (ENSCJPG00005001437) ##21 SCOC (ENSCJPG00005001434) MAML3 (ENSCJPG00005001430) ##22 MGST2 (ENSCJPG00005001427) SETD7 (ENSCJPG00005001153) ENSCJPG00005001141 RAB33B (ENSCJPG00005001138) ENSCJPG00005001134 NAA15 (ENSCJPG00005001125) ENSCJPG00005001114 ELF2 (ENSCJPG00005001105) NOCT (ENSCJPG00005001095) SLC7A11 (ENSCJPG00005001052) PCDH18 (ENSCJPG00005001014) ENSCJPG00005000866 PCDH10 (ENSCJPG00005000865) CBR4 (ENSCJPG00005000833) SH3RF1 (ENSCJPG00005000830) Neognathae_b ANCESTRAL SPECIES 4 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT01030000234904 ENSGT00390000006284 ENSGT00730000111168 Neognathae_c ANCESTRAL SPECIES 3 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT01030000234904 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Golden eagle MODERN SPECIES HHIP (ENSACCG00020004238) FREM3 (ENSACCG00020004273) SMARCA5 (ENSACCG00020004298) GAB1 (ENSACCG00020004329) USP38 (ENSACCG00020004349) ENSACCG00020004358 INPP4B (ENSACCG00020004385) IL15 (ENSACCG00020004400) ZNF330 (ENSACCG00020004408) RNF150 (ENSACCG00020004420) TBC1D9 (ENSACCG00020004481) ELMOD2 (ENSACCG00020004532) MGAT4D (ENSACCG00020004548) CLGN (ENSACCG00020004573) ##21 SCOC (ENSACCG00020004596) MAML3 (ENSACCG00020004615) ##22 MGST2 (ENSACCG00020004630) SETD7 (ENSACCG00020004635) ENSACCG00020004643 RAB33B (ENSACCG00020004649) NAA15 (ENSACCG00020004663) MGARP (ENSACCG00020004679) ELF2 (ENSACCG00020004688) NOCT (ENSACCG00020004698) SLC7A11 (ENSACCG00020004716) PCDH18 (ENSACCG00020004729) PCDH10 (ENSACCG00020004741) ENSACCG00020004749 C4orf33 (ENSACCG00020004752) SCLT1 (ENSACCG00020004760) JADE1 (ENSACCG00020004769) Kakapo MODERN SPECIES 24 HHIP (ENSSHBG00005017242) SMARCA5 (ENSSHBG00005017362) GAB1 (ENSSHBG00005019461) USP38 (ENSSHBG00005019470) ENSSHBG00005019474 INPP4B (ENSSHBG00005019479) IL15 (ENSSHBG00005019486) ZNF330 (ENSSHBG00005019490) RNF150 (ENSSHBG00005019495) TBC1D9 (ENSSHBG00005019503) ELMOD2 (ENSSHBG00005019507) ENSSHBG00005019510 ENSSHBG00005019516 CLGN (ENSSHBG00005019521) ##21 SCOC (ENSSHBG00005019524) MAML3 (ENSSHBG00005019526) ##22 MGST2 (ENSSHBG00005019528) SETD7 (ENSSHBG00005019529) ENSSHBG00005019531 RAB33B (ENSSHBG00005019533) NAA15 (ENSSHBG00005019557) ENSSHBG00005019674 ELF2 (ENSSHBG00005019685) NOCT (ENSSHBG00005019690) ENSSHBG00005019691 SLC7A11 (ENSSHBG00005019696) PCDH18 (ENSSHBG00005019701) PCDH10 (ENSSHBG00005019708) ENSSHBG00005019714 C4orf33 (ENSSHBG00005019745) SCLT1 (ENSSHBG00005019749) Passeriformes ANCESTRAL SPECIES 4 ENSGT00390000017405 ENSGT00940000160856 ENSGT00940000157583 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT01030000234904 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 Great tit MODERN SPECIES 23 ENSPMJG00000008324 KLHL8 (ENSPMJG00000008322) SMARCA5 (ENSPMJG00000008316) GAB1 (ENSPMJG00000008314) USP38 (ENSPMJG00000008289) INPP4B (ENSPMJG00000008257) IL15 (ENSPMJG00000008228) ZNF330 (ENSPMJG00000008227) ENSPMJG00000008225 RNF150 (ENSPMJG00000008224) TBC1D9 (ENSPMJG00000008167) ELMOD2 (ENSPMJG00000008165) MGAT4D (ENSPMJG00000008164) CLGN (ENSPMJG00000008161) ##21 SCOC (ENSPMJG00000008094) MAML3 (ENSPMJG00000008093) ##22 SETD7 (ENSPMJG00000008010) ENSPMJG00000008009 RAB33B (ENSPMJG00000008008) NAA15 (ENSPMJG00000008006) ENSPMJG00000007945 C4orf33 (ENSPMJG00000007931) SCLT1 (ENSPMJG00000007930) JADE1 (ENSPMJG00000007922) PGRMC2 (ENSPMJG00000007919) LARP1B (ENSPMJG00000007861) ABHD18 (ENSPMJG00000007858) MFSD8 (ENSPMJG00000007855) PLK4 (ENSPMJG00000007852) HSPA4L (ENSPMJG00000007851) INTU (ENSPMJG00000007850) Passeriformes_d DUPLICATION Passeriformes_d ANCESTRAL SPECIES ENSGT00950000183201.b.b.a.s ##22 Passeriformes_g ANCESTRAL SPECIES ENSGT00950000183201.b.b.a.s ##22 Medium ground finch MODERN SPECIES 156 SMARCA5 (ENSGFOG00000006931) GAB1 (ENSGFOG00000006892) USP38 (ENSGFOG00000006876) IL15 (ENSGFOG00000006861) INPP4B (ENSGFOG00000006820) ZNF330 (ENSGFOG00000006807) RNF150 (ENSGFOG00000006804) TBC1D9 (ENSGFOG00000005171) ELMOD2 (ENSGFOG00000005110) MGAT4D (ENSGFOG00000004985) CLGN (ENSGFOG00000004932) ##21 SCOC (ENSGFOG00000004919) ENSGFOG00000004903 ##22 ENSGFOG00000004897 ##22 SETD7 (ENSGFOG00000004890) ENSGFOG00000004883 RAB33B (ENSGFOG00000004877) NAA15 (ENSGFOG00000004860) ENSGFOG00000004827 ELF2 (ENSGFOG00000004812) NOCT (ENSGFOG00000004806) Passeriformes_d ANCESTRAL SPECIES 4 ENSGT00390000017405 ENSGT00940000160856 ENSGT00940000157583 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587.i ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171.b ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a.t ##22 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT01030000234904 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 Passeriformes_g ANCESTRAL SPECIES 59 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587.i ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171.b ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a.t ##22 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00940000154953 ENSGT00940000155249 Passeroidea ANCESTRAL SPECIES 61 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587.i ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171.b ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a.t ##22 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00940000154953 ENSGT00940000155249 Common canary MODERN SPECIES 48 SMARCA5 (ENSSCAG00000012608) ENSSCAG00000012620 ENSSCAG00000012621 ENSSCAG00000012622 GAB1 (ENSSCAG00000012630) USP38 (ENSSCAG00000012638) INPP4B (ENSSCAG00000012655) IL15 (ENSSCAG00000012668) ZNF330 (ENSSCAG00000012672) RNF150 (ENSSCAG00000012679) TBC1D9 (ENSSCAG00000012722) ELMOD2 (ENSSCAG00000012951) MGAT4D (ENSSCAG00000012957) CLGN (ENSSCAG00000012966) ##21 SCOC (ENSSCAG00000012976) MAML3 (ENSSCAG00000012979) ##22 SETD7 (ENSSCAG00000012985) ENSSCAG00000012990 RAB33B (ENSSCAG00000012996) NAA15 (ENSSCAG00000012999) ENSSCAG00000013012 ELF2 (ENSSCAG00000013024) NOCT (ENSSCAG00000013027) PCDH18 (ENSSCAG00000013030) Zebra finch MODERN SPECIES 25 NAA15 (ENSTGUG00000002442) RAB33B (ENSTGUG00000022994) SETD7 (ENSTGUG00000028538) SMARCA5 (ENSTGUG00000002408) GAB1 (ENSTGUG00000002400) USP38 (ENSTGUG00000002389) INPP4B (ENSTGUG00000021408) ENSTGUG00000025612 ENSTGUG00000002368 ZNF330 (ENSTGUG00000002360) RNF150 (ENSTGUG00000029099) TBC1D9 (ENSTGUG00000002325) ELMOD2 (ENSTGUG00000028132) ENSTGUG00000002287 SCOC (ENSTGUG00000026865) MAML3 (ENSTGUG00000002284) ##22 ENSTGUG00000002283 KLHL8 (ENSTGUG00000002275) HSD17B11 (ENSTGUG00000002260) NUDT9 (ENSTGUG00000002249) SPARCL1 (ENSTGUG00000002242) ENSTGUG00000022654 IBSP (ENSTGUG00000002236) ENSTGUG00000023586 SPP1 (ENSTGUG00000002233) PKD2 (ENSTGUG00000002213) ABCG2 (ENSTGUG00000002200) PLAC8 (ENSTGUG00000002199) COQ2 (ENSTGUG00000002188) HPSE (ENSTGUG00000002169) HELQ (ENSTGUG00000002154) Medium ground finch MODERN SPECIES 156 SMARCA5 (ENSGFOG00000006931) GAB1 (ENSGFOG00000006892) USP38 (ENSGFOG00000006876) IL15 (ENSGFOG00000006861) INPP4B (ENSGFOG00000006820) ZNF330 (ENSGFOG00000006807) RNF150 (ENSGFOG00000006804) TBC1D9 (ENSGFOG00000005171) ELMOD2 (ENSGFOG00000005110) MGAT4D (ENSGFOG00000004985) CLGN (ENSGFOG00000004932) ##21 SCOC (ENSGFOG00000004919) ENSGFOG00000004903 ##22 ENSGFOG00000004897 ##22 SETD7 (ENSGFOG00000004890) ENSGFOG00000004883 RAB33B (ENSGFOG00000004877) NAA15 (ENSGFOG00000004860) ENSGFOG00000004827 ELF2 (ENSGFOG00000004812) NOCT (ENSGFOG00000004806) Flycatcher MODERN SPECIES 22 HSD17B11 (ENSFALG00000005021) KLHL8 (ENSFALG00000005003) SMARCA5 (ENSFALG00000004987) GAB1 (ENSFALG00000004978) USP38 (ENSFALG00000004974) INPP4B (ENSFALG00000004964) IL15 (ENSFALG00000027447) ZNF330 (ENSFALG00000022973) ENSFALG00000027544 ENSFALG00000004942 TBC1D9 (ENSFALG00000004931) ELMOD2 (ENSFALG00000004921) MGAT4D (ENSFALG00000004911) CLGN (ENSFALG00000004907) ##21 SCOC (ENSFALG00000027344) MAML3 (ENSFALG00000004900) ##22 SETD7 (ENSFALG00000004893) ENSFALG00000004889 RAB33B (ENSFALG00000023528) NAA15 (ENSFALG00000004885) ENSFALG00000026263 ELF2 (ENSFALG00000004881) NOCT (ENSFALG00000004876) SLC7A11 (ENSFALG00000004848) PCDH18 (ENSFALG00000004833) ENSFALG00000025531 PCDH10 (ENSFALG00000011099) ENSFALG00000011096 C4orf33 (ENSFALG00000008077) SCLT1 (ENSFALG00000008081) JADE1 (ENSFALG00000008083) Lepidosauria ANCESTRAL SPECIES 9 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 tuatara MODERN SPECIES 22 SMARCA5 (ENSSPUG00000007604) GAB1 (ENSSPUG00000007733) USP38 (ENSSPUG00000007753) ENSSPUG00000007768 ENSSPUG00000007773 INPP4B (ENSSPUG00000007792) IL15 (ENSSPUG00000007841) ZNF330 (ENSSPUG00000007853) ENSSPUG00000007861 RNF150 (ENSSPUG00000007877) TBC1D9 (ENSSPUG00000007929) ELMOD2 (ENSSPUG00000007981) MGAT4D (ENSSPUG00000007992) CLGN (ENSSPUG00000008019) ##21 SCOC (ENSSPUG00000008058) ENSSPUG00000008070 ##22 MGST2 (ENSSPUG00000008078) SETD7 (ENSSPUG00000008084) ENSSPUG00000008102 RAB33B (ENSSPUG00000008120) NAA15 (ENSSPUG00000008128) ELF2 (ENSSPUG00000008145) NOCT (ENSSPUG00000008160) SLC7A11 (ENSSPUG00000008169) PCDH18 (ENSSPUG00000008196) Episquamata ANCESTRAL SPECIES 3 ENSGT00390000015089 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 ENSGT00940000154718 Laterata ANCESTRAL SPECIES 9 ENSGT00390000015089 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 ENSGT00940000154718 Common wall lizard MODERN SPECIES 17 ANAPC10 (ENSPMRG00000013371) ENSPMRG00000013376 HHIP (ENSPMRG00000013378) FREM3 (ENSPMRG00000013392) SMARCA5 (ENSPMRG00000007816) USP38 (ENSPMRG00000007836) INPP4B (ENSPMRG00000007851) ZNF330 (ENSPMRG00000007858) RNF150 (ENSPMRG00000007860) TBC1D9 (ENSPMRG00000007862) ELMOD2 (ENSPMRG00000007868) MGAT4D (ENSPMRG00000007884) CLGN (ENSPMRG00000007907) ##21 SCOC (ENSPMRG00000007916) ENSPMRG00000007920 MAML3 (ENSPMRG00000007924) ##22 SETD7 (ENSPMRG00000007929) ENSPMRG00000007932 RAB33B (ENSPMRG00000007939) NAA15 (ENSPMRG00000007950) ENSPMRG00000007968 ELF2 (ENSPMRG00000007987) NOCT (ENSPMRG00000007997) SLC7A11 (ENSPMRG00000008006) PCDH18 (ENSPMRG00000008014) ENSPMRG00000008018 ENSPMRG00000008026 PCDH10 (ENSPMRG00000008036) ENSPMRG00000008053 ENSPMRG00000008059 ENSPMRG00000008071 Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 26 HHIP (ENSSMRG00000019375) FREM3 (ENSSMRG00000019373) SMARCA5 (ENSSMRG00000019372) GAB1 (ENSSMRG00000019371) ENSSMRG00000019369 USP38 (ENSSMRG00000019368) INPP4B (ENSSMRG00000019367) ZNF330 (ENSSMRG00000019365) RNF150 (ENSSMRG00000019363) ENSSMRG00000019361 ENSSMRG00000019360 ELMOD2 (ENSSMRG00000019359) MGAT4D (ENSSMRG00000019358) CLGN (ENSSMRG00000019357) ##21 SCOC (ENSSMRG00000019356) ENSSMRG00000019355 ##22 Argentine black and white tegu MODERN SPECIES 11 ENSSMRG00000015626 ##22 SETD7 (ENSSMRG00000015624) ENSSMRG00000015621 RAB33B (ENSSMRG00000015620) NAA15 (ENSSMRG00000015616) ELF2 (ENSSMRG00000015613) NOCT (ENSSMRG00000015612) SLC7A11 (ENSSMRG00000015609) PCDH18 (ENSSMRG00000015604) ENSSMRG00000015603 ENSSMRG00000015599 PCDH10 (ENSSMRG00000015597) ENSSMRG00000015595 C4orf33 (ENSSMRG00000015594) SCLT1 (ENSSMRG00000015593) JADE1 (ENSSMRG00000015592) Toxicofera ANCESTRAL SPECIES 12 ENSGT00390000015089 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT01030000234904 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 Lizard MODERN SPECIES 4 GAB1 (ENSACAG00000002955) ENSACAG00000042595 USP38 (ENSACAG00000002889) INPP4B (ENSACAG00000002735) ENSACAG00000034681 ENSACAG00000042416 ZNF330 (ENSACAG00000002683) RNF150 (ENSACAG00000002648) TBC1D9 (ENSACAG00000002504) ELMOD2 (ENSACAG00000037737) ENSACAG00000036219 ENSACAG00000043952 MGAT4D (ENSACAG00000002396) CLGN (ENSACAG00000002293) ##21 SCOC (ENSACAG00000040074) MAML3 (ENSACAG00000002268) ##22 ENSACAG00000043280 ENSACAG00000041429 SETD7 (ENSACAG00000002249) ENSACAG00000028951 RAB33B (ENSACAG00000002227) NAA15 (ENSACAG00000002092) ENSACAG00000036630 ELF2 (ENSACAG00000001979) NOCT (ENSACAG00000001961) SLC7A11 (ENSACAG00000001704) ENSACAG00000042372 ENSACAG00000036169 PCDH18 (ENSACAG00000013347) ENSACAG00000045211 ENSACAG00000036682 Elapidae ANCESTRAL SPECIES 11 ENSGT00390000015089 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 ENSGT00940000154718 Elapidae_a ANCESTRAL SPECIES 13 ENSGT00390000015089 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 ENSGT00940000154718.a Acanthophiinae ANCESTRAL SPECIES 4 ENSGT00390000015089 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.b.a ##22 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT01030000235247 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 ENSGT00940000159744 ENSGT00940000154718.a Eastern brown snake MODERN SPECIES 9 ANAPC10 (ENSPTXG00000010146) HHIP (ENSPTXG00000010144) ENSPTXG00000010141 ENSPTXG00000010138 SMARCA5 (ENSPTXG00000010134) GAB1 (ENSPTXG00000010131) USP38 (ENSPTXG00000010129) INPP4B (ENSPTXG00000009897) ZNF330 (ENSPTXG00000009891) RNF150 (ENSPTXG00000009889) TBC1D9 (ENSPTXG00000009886) ELMOD2 (ENSPTXG00000009884) MGAT4D (ENSPTXG00000009881) CLGN (ENSPTXG00000009879) ##21 SCOC (ENSPTXG00000009878) MAML3 (ENSPTXG00000009876) ##22 SETD7 (ENSPTXG00000009875) ENSPTXG00000009874 RAB33B (ENSPTXG00000009873) NAA15 (ENSPTXG00000009872) ENSPTXG00000009870 ELF2 (ENSPTXG00000009869) NOCT (ENSPTXG00000009867) SLC7A11 (ENSPTXG00000009866) PCDH18 (ENSPTXG00000009865) ENSPTXG00000009863 PCDH10 (ENSPTXG00000009862) ENSPTXG00000009861 C4orf33 (ENSPTXG00000009860) SCLT1 (ENSPTXG00000009850) JADE1 (ENSPTXG00000009847) Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 24 HHIP (ENSNSUG00000005097) ENSNSUG00000005129 ENSNSUG00000005135 SMARCA5 (ENSNSUG00000005138) GAB1 (ENSNSUG00000005191) USP38 (ENSNSUG00000005347) ENSNSUG00000005428 INPP4B (ENSNSUG00000005430) ZNF330 (ENSNSUG00000005776) RNF150 (ENSNSUG00000005778) TBC1D9 (ENSNSUG00000005783) ELMOD2 (ENSNSUG00000005870) MGAT4D (ENSNSUG00000005895) CLGN (ENSNSUG00000005899) ##21 SCOC (ENSNSUG00000005902) ENSNSUG00000005903 ##22 SETD7 (ENSNSUG00000005904) RAB33B (ENSNSUG00000005905) NAA15 (ENSNSUG00000005907) ENSNSUG00000005909 ELF2 (ENSNSUG00000005910) NOCT (ENSNSUG00000005912) SLC7A11 (ENSNSUG00000005914) PCDH18 (ENSNSUG00000006091) ENSNSUG00000006093 PCDH10 (ENSNSUG00000006097) ENSNSUG00000006099 Mainland tiger snake MODERN SPECIES 2039 ENSNSUG00000001664 ##22 Blue-lipped sea krait DUPLICATION Blue-lipped sea krait MODERN SPECIES 527 ENSLLTG00000009517 ##22 Blue-lipped sea krait MODERN SPECIES 1805 ENSLLTG00000011885 ##22 Indian cobra DUPLICATION Indian cobra MODERN SPECIES 3 ANAPC10 (ENSNNAG00000011097) HHIP (ENSNNAG00000011159) FREM3 (ENSNNAG00000011252) SMARCA5 (ENSNNAG00000011601) GAB1 (ENSNNAG00000011879) USP38 (ENSNNAG00000011989) INPP4B (ENSNNAG00000012068) ZNF330 (ENSNNAG00000012380) RNF150 (ENSNNAG00000012408) TBC1D9 (ENSNNAG00000012434) ELMOD2 (ENSNNAG00000012545) MGAT4D (ENSNNAG00000012606) CLGN (ENSNNAG00000012667) ##21 SCOC (ENSNNAG00000012713) ENSNNAG00000012770 ##22 ENSNNAG00000012782 ##22 SETD7 (ENSNNAG00000012814) RAB33B (ENSNNAG00000012837) NAA15 (ENSNNAG00000003008) ENSNNAG00000003022 ELF2 (ENSNNAG00000003031) NOCT (ENSNNAG00000003044) SLC7A11 (ENSNNAG00000003051) ENSNNAG00000003067 ENSNNAG00000003073 PCDH10 (ENSNNAG00000003086) ENSNNAG00000003102 C4orf33 (ENSNNAG00000003112) SCLT1 (ENSNNAG00000003127) JADE1 (ENSNNAG00000003190) LARP1B (ENSNNAG00000003244) Indian cobra MODERN SPECIES 3 ABCE1 (ENSNNAG00000010986) ANAPC10 (ENSNNAG00000011097) HHIP (ENSNNAG00000011159) FREM3 (ENSNNAG00000011252) SMARCA5 (ENSNNAG00000011601) GAB1 (ENSNNAG00000011879) USP38 (ENSNNAG00000011989) INPP4B (ENSNNAG00000012068) ZNF330 (ENSNNAG00000012380) RNF150 (ENSNNAG00000012408) TBC1D9 (ENSNNAG00000012434) ELMOD2 (ENSNNAG00000012545) MGAT4D (ENSNNAG00000012606) CLGN (ENSNNAG00000012667) ##21 SCOC (ENSNNAG00000012713) ENSNNAG00000012770 ##22 ENSNNAG00000012782 ##22 SETD7 (ENSNNAG00000012814) RAB33B (ENSNNAG00000012837) NAA15 (ENSNNAG00000003008) ENSNNAG00000003022 ELF2 (ENSNNAG00000003031) NOCT (ENSNNAG00000003044) SLC7A11 (ENSNNAG00000003051) ENSNNAG00000003067 ENSNNAG00000003073 PCDH10 (ENSNNAG00000003086) ENSNNAG00000003102 C4orf33 (ENSNNAG00000003112) SCLT1 (ENSNNAG00000003127) JADE1 (ENSNNAG00000003190) Gnathostomata ANCESTRAL SPECIES ENSGT00950000183201.b.a ##22 Euteleostomi DUPLICATION Euteleostomi DUPLICATION Euteleostomi ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.a ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.a ##22 Neopterygii ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.a ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.a ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.a ##22 Otomorpha ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.a ##22 Otophysi ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.a ##22 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.a ##22 Cyprininae ANCESTRAL SPECIES 1876 ENSGT00950000183201.b.a.a.a ##22 ENSGT00950000183201.b.a.b.c ##22 Goldfish MODERN SPECIES 1575 ENSCARG00000037735 ##22 ENSCARG00000037747 ##22 TESK1 (ENSCARG00000037769) Cyprininae_a ANCESTRAL SPECIES 219 ENSGT00390000015386.a.a ENSGT00390000004855.e ENSGT00940000161707.a.a.c ENSGT00940000162580.b.b.d ENSGT00940000165038.a.e ENSGT00940000156391.d.c.a ENSGT00940000156391.d.d ENSGT00950000183001.b.b.a.b ENSGT00940000159570.a.b ENSGT01100000263541.a.a.b.a.a.b.a ENSGT01100000263541.a.a.b.a.a.b.b ENSGT00940000157090.h.a ENSGT00950000183174.B.a.e.e.b ENSGT00950000182915.a.a.b.b ##21 ENSGT00390000008828.fb.b.b ENSGT00950000183201.b.a.a.a ##22 ENSGT00950000183201.b.a.b.c ##22 ENSGT00940000154259.b.b.b ENSGT00940000162502.a.b ENSGT00940000157807.g.b.k.a ENSGT01100000263483.E.b.a.c.a.a.a.a Common carp reference MODERN SPECIES 27 rgs12b (ENSCCRG00000046322) DOK7 (ENSCCRG00000032118) lrpap1 (ENSCCRG00000032124) adra2c (ENSCCRG00000065027) hmx1 (ENSCCRG00000032131) hmx4 (ENSCCRG00000064526) ENSCCRG00000032148 htra3a (ENSCCRG00000024478) ENSCCRG00000041846 zgc:153642 (ENSCCRG00000052899) zgc:153642 (ENSCCRG00000019090) ENSCCRG00000059639 naa15b (ENSCCRG00000069209) clgn (ENSCCRG00000000597) ##21 scoca (ENSCCRG00000013811) ENSCCRG00000062927 ##22 ENSCCRG00000069258 ##22 zgc:56493 (ENSCCRG00000076188) faah2a (ENSCCRG00000017057) ENSCCRG00000004413 ENSCCRG00000053249 ENSCCRG00000023488 ENSCCRG00000025732 ENSCCRG00000054934 ENSCCRG00000057879 ENSCCRG00000077428 cntf (ENSCCRG00000025703) ENSCCRG00000067650 ccdc149b (ENSCCRG00000051986) lgi2b (ENSCCRG00000054335) aip (ENSCCRG00000051967) Euteleostomi ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Otomorpha ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Otophysi ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Cyprininae ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Cyprininae_a DUPLICATION Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b.a ##22 Common carp reference MODERN SPECIES 22 ENSCCRG00000019268 htt (ENSCCRG00000029374) rgs12b (ENSCCRG00000029622) DOK7 (ENSCCRG00000012914) lrpap1 (ENSCCRG00000012516) adra2c (ENSCCRG00000000657) hmx1 (ENSCCRG00000070286) hmx4 (ENSCCRG00000071347) ENSCCRG00000063031 ENSCCRG00000000645 GPR78 (ENSCCRG00000043794) htra3a (ENSCCRG00000062143) naa15b (ENSCCRG00000053315) clgn (ENSCCRG00000013821) ##21 scoca (ENSCCRG00000054316) ENSCCRG00000005171 ##22 ENSCCRG00000079931 ##22 ENSCCRG00000063458 ENSCCRG00000061939 ENSCCRG00000000441 zgc:56493 (ENSCCRG00000071331) faah2a (ENSCCRG00000058192) ENSCCRG00000023502 ENSCCRG00000023521 ENSCCRG00000056721 ENSCCRG00000073840 ENSCCRG00000077796 ENSCCRG00000056872 cntf (ENSCCRG00000059766) ccdc149b (ENSCCRG00000051983) lgi2b (ENSCCRG00000051972) Golden-line barbel MODERN SPECIES 16 htt (ENSSGRG00000037092) rgs12b (ENSSGRG00000037067) lrpap1 (ENSSGRG00000036737) adra2c (ENSSGRG00000036724) hmx1 (ENSSGRG00000036722) hmx4 (ENSSGRG00000036721) CPZ (ENSSGRG00000036683) GPR78 (ENSSGRG00000036681) htra3a (ENSSGRG00000036680) zgc:153642 (ENSSGRG00000036679) zgc:153642 (ENSSGRG00000036678) RAB33B (ENSSGRG00000036676) naa15b (ENSSGRG00000036390) clgn (ENSSGRG00000036268) ##21 scoca (ENSSGRG00000036266) ENSSGRG00000036264 ##22 ENSSGRG00000036263 ##22 ENSSGRG00000036262 ##22 ENSSGRG00000036261 zgc:56493 (ENSSGRG00000036260) faah2a (ENSSGRG00000036259) TESK1 (ENSSGRG00000036258) ENSSGRG00000036256 ENSSGRG00000036255 ENSSGRG00000036254 ENSSGRG00000036253 ENSSGRG00000036252 ENSSGRG00000036251 ENSSGRG00000036249 cntf (ENSSGRG00000036247) ccdc149b (ENSSGRG00000036241) Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b.b ##22 Golden-line barbel MODERN SPECIES 570 ENSSGRG00000008865 paip2b (ENSSGRG00000008873) htt (ENSSGRG00000008900) rgs12b (ENSSGRG00000009077) DOK7 (ENSSGRG00000009091) lrpap1 (ENSSGRG00000009097) adra2c (ENSSGRG00000009297) hmx1 (ENSSGRG00000009298) hmx4 (ENSSGRG00000009299) ENSSGRG00000009300 htra3a (ENSSGRG00000009304) RAB33B (ENSSGRG00000009305) naa15b (ENSSGRG00000009323) clgn (ENSSGRG00000009907) ##21 scoca (ENSSGRG00000010093) ENSSGRG00000010098 ##22 ENSSGRG00000010099 ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Mammalia ANCESTRAL SPECIES ENSGT00950000183201.b.a.a.b ##22 Platypus MODERN SPECIES 12 ENSOANG00000010478 MMP1 (ENSOANG00000010480) MMP8 (ENSOANG00000010484) ENSOANG00000047319 ENSOANG00000046987 ENSOANG00000010486 YAP1 (ENSOANG00000010488) CFAP300 (ENSOANG00000010489) ENSOANG00000010490 ANGPTL5 (ENSOANG00000010491) TRPC6 (ENSOANG00000010492) ENSOANG00000010494 ARHGAP42 (ENSOANG00000010495) CNTN5 (ENSOANG00000010496) ENSOANG00000010497 ENSOANG00000043963 ##22 MAML2 (ENSOANG00000010498) ##22 MTMR2 (ENSOANG00000010499) CEP57 (ENSOANG00000040575) FAM76B (ENSOANG00000045559) SESN3 (ENSOANG00000010503) ENSOANG00000010505 ENSOANG00000010405 ENSOANG00000010404 AMOTL1 (ENSOANG00000010403) ENSOANG00000038002 ENSOANG00000029843 ANKRD49 (ENSOANG00000010402) MRE11 (ENSOANG00000010399) GPR83 (ENSOANG00000040634) PANX1 (ENSOANG00000011723) Euteleostomi ANCESTRAL SPECIES 13 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000182021 ENSGT00940000156526.b ##24 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT01030000235247 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT01030000234904 Sarcopterygii ANCESTRAL SPECIES 18 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000010494 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000182021 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT01030000235247 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 Coelacanth MODERN SPECIES 543 CLGN (ENSLACG00000002424) ##21 SCOC (ENSLACG00000004488) ENSLACG00000007654 ##22 MAML3 (ENSLACG00000010639) ##22 MGST2 (ENSLACG00000012359) SETD7 (ENSLACG00000012870) zgc:113425 (ENSLACG00000013312) RAB33B (ENSLACG00000013571) mlsl (ENSLACG00000013696) NAA15 (ENSLACG00000013953) MGARP (ENSLACG00000014636) ELF2 (ENSLACG00000015111) NOCT (ENSLACG00000015874) Tetrapoda ANCESTRAL SPECIES 3 ENSGT00940000158660 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT01030000235247 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 Amniota ANCESTRAL SPECIES 2 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT01030000235247 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 Mammalia ANCESTRAL SPECIES 1 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 Theria ANCESTRAL SPECIES 6 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 Eutheria ANCESTRAL SPECIES 2 ENSGT00940000162501 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00950000186280 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 Atlantogenata ANCESTRAL SPECIES 49 ENSGT00390000013722 ENSGT00940000158660 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000160382 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 ENSGT00940000158277 ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000158247 Xenarthra ANCESTRAL SPECIES 87 ENSGT00940000156733 ENSGT00940000156801 ENSGT00940000158403 ENSGT00940000157587 ENSGT00390000016264 ENSGT00390000017043 ENSGT00940000156171 ENSGT00940000157878 ENSGT00940000156589 ENSGT00940000161998 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00950000183201.b.b.a ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00940000157090 ENSGT00950000183174.B.a ENSGT00390000002565 ENSGT00440000037338 ENSGT00990000203987 ENSGT00940000154953 ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 Armadillo MODERN SPECIES 2885 SMARCA5 (ENSDNOG00000009158) GAB1 (ENSDNOG00000019599) ENSDNOG00000045535 USP38 (ENSDNOG00000043607) INPP4B (ENSDNOG00000046642) IL15 (ENSDNOG00000034678) ENSDNOG00000041774 ZNF330 (ENSDNOG00000048527) RNF150 (ENSDNOG00000038812) TBC1D9 (ENSDNOG00000005384) ELMOD2 (ENSDNOG00000035842) ENSDNOG00000038747 CLGN (ENSDNOG00000004054) ##21 SCOC (ENSDNOG00000030600) ENSDNOG00000046815 ##22 MAML3 (ENSDNOG00000002937) ##22 MGST2 (ENSDNOG00000034606) SETD7 (ENSDNOG00000037968) RAB33B (ENSDNOG00000005253) NAA15 (ENSDNOG00000037740) ENSDNOG00000001984 MGARP (ENSDNOG00000033335) ENSDNOG00000049203 ENSDNOG00000039348 ELF2 (ENSDNOG00000047868) NOCT (ENSDNOG00000036912) ENSDNOG00000044938 ENSDNOG00000032621 SLC7A11 (ENSDNOG00000011228) PCDH18 (ENSDNOG00000044279) Actinopterygii ANCESTRAL SPECIES 20 ENSGT00950000183001.b ENSGT00940000156391 ENSGT00940000165038 ENSGT00940000162580 ENSGT00940000161707.a.a ENSGT00390000004855 ENSGT00390000015386 ENSGT00940000159778.a ENSGT00940000159741 ENSGT00390000002245 ENSGT00390000015863 ENSGT00940000160151 ENSGT00940000156526.b ##24 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a.f ENSGT00940000154953.a ENSGT00950000183174.B.a.e ENSGT00390000002565 ENSGT01030000235247 ENSGT00440000037338 ENSGT00940000154953.b ENSGT00940000155249 ENSGT00940000160324 ENSGT00940000156295 Neopterygii ANCESTRAL SPECIES 35 ENSGT00950000183001.b ENSGT00940000156391 ENSGT00940000165038 ENSGT00940000162580 ENSGT00940000161707.a.a ENSGT00390000004855 ENSGT00390000015386 ENSGT00940000159778.a ENSGT00940000164407.a.a ENSGT00390000002245 ENSGT00390000015863 ENSGT00940000160151 ENSGT00940000156526.b ##24 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090 ENSGT00390000002932 ENSGT00950000183174.B.a.f ENSGT00940000154953.a ENSGT00950000183174.B.a.e ENSGT00390000002565 ENSGT01030000235247 ENSGT00440000037338 ENSGT00940000154953.b ENSGT00940000155249 ENSGT00940000166427 ENSGT00940000156295 Spotted gar MODERN SPECIES 670 GPR78 (ENSLOCG00000010323) CPZ (ENSLOCG00000010330) hmx4 (ENSLOCG00000010349) ENSLOCG00000010357 adra2c (ENSLOCG00000018038) lrpap1 (ENSLOCG00000010362) DOK7 (ENSLOCG00000010376) HGFAC (ENSLOCG00000010382) rgs12b (ENSLOCG00000010388) msantd1 (ENSLOCG00000010411) htt (ENSLOCG00000010421) grk4 (ENSLOCG00000010446) zgc:154054 (ENSLOCG00000010472) ##24 clgn (ENSLOCG00000010483) ##21 scocb (ENSLOCG00000010495) ENSLOCG00000010506 ##22 mgst2 (ENSLOCG00000010514) setd7 (ENSLOCG00000010519) zgc:113425 (ENSLOCG00000010524) rab33ba (ENSLOCG00000010535) mlsl (ENSLOCG00000010540) naa15b (ENSLOCG00000010549) ENSLOCG00000010564 mgarpa (ENSLOCG00000010572) elf2b (ENSLOCG00000010581) NOCT (ENSLOCG00000010593) ENSLOCG00000010595 pcdh18b (ENSLOCG00000010600) ENSLOCG00000010606 ENSLOCG00000018040 pcdh10b (ENSLOCG00000010614) Osteoglossocephalai ANCESTRAL SPECIES 164 ENSGT00940000156526.b ##24 ENSGT00390000008828 ENSGT00950000183201.b.a.b ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090.g ENSGT00950000183174.B.a.f ENSGT00440000037338 ENSGT00940000154953.a ENSGT00940000157090.h ENSGT00390000002932 ENSGT00950000183174.B.a.e ENSGT00390000002565 ENSGT00990000203987 ENSGT00940000154953.b ENSGT00940000155249 ENSGT00940000166427 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 292 ENSGT00940000159423 ENSGT00390000000645 ENSGT00950000183001.b.b.a.e ENSGT00940000156391.c ENSGT00940000158286.f ENSGT00940000165038.a ENSGT00940000162580 ENSGT00940000161707.a.a ENSGT00390000004855 ENSGT00390000015386 ENSGT00940000164407.a.a.`b ENSGT00390000015863 ENSGT00940000160151 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.hb.a ENSGT00950000183201.b.a.b.a ##22 ENSGT00940000157090.g Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 7 ENSSFOG00015000256 ENSSFOG00015000243 GPR78 (ENSSFOG00015000190) CPZ (ENSSFOG00015000173) ENSSFOG00015000153 hmx1 (ENSSFOG00015000124) adra2c (ENSSFOG00015020444) lrpap1 (ENSSFOG00015020423) DOK7 (ENSSFOG00015020390) ENSSFOG00015020376 rgs12b (ENSSFOG00015020342) htt (ENSSFOG00015020239) grk4 (ENSSFOG00015020186) clgn (ENSSFOG00015020145) ##21 scoca (ENSSFOG00015032096) ENSSFOG00015020120 ##22 ENSSFOG00015026701 ##22 rab33ba (ENSSFOG00015028583) naa15b (ENSSFOG00015020061) ENSSFOG00015020037 elf2b (ENSSFOG00015019967) NOCT (ENSSFOG00015019938) PCDH18 (ENSSFOG00015019917) pcdh10a (ENSSFOG00015024054) ENSSFOG00015024055 zgc:77739 (ENSSFOG00015029461) SCLT1 (ENSSFOG00015008169) smim19 (ENSSFOG00015032087) DNAH6 (ENSSFOG00015008240) ENSSFOG00015008439 chrnb3a (ENSSFOG00015008478) Asian bonytongue MODERN SPECIES 7 ENSSFOG00015000243 GPR78 (ENSSFOG00015000190) CPZ (ENSSFOG00015000173) ENSSFOG00015000153 hmx1 (ENSSFOG00015000124) adra2c (ENSSFOG00015020444) lrpap1 (ENSSFOG00015020423) DOK7 (ENSSFOG00015020390) ENSSFOG00015020376 rgs12b (ENSSFOG00015020342) htt (ENSSFOG00015020239) grk4 (ENSSFOG00015020186) clgn (ENSSFOG00015020145) ##21 scoca (ENSSFOG00015032096) ENSSFOG00015020120 ##22 ENSSFOG00015026701 ##22 rab33ba (ENSSFOG00015028583) naa15b (ENSSFOG00015020061) ENSSFOG00015020037 elf2b (ENSSFOG00015019967) NOCT (ENSSFOG00015019938) PCDH18 (ENSSFOG00015019917) pcdh10a (ENSSFOG00015024054) ENSSFOG00015024055 zgc:77739 (ENSSFOG00015029461) SCLT1 (ENSSFOG00015008169) smim19 (ENSSFOG00015032087) DNAH6 (ENSSFOG00015008240) ENSSFOG00015008439 chrnb3a (ENSSFOG00015008478) CHRNA6 (ENSSFOG00015008527) P. kingsleyae MODERN SPECIES 25 gtf2e2 (ENSPKIG00000000483) ENSPKIG00000000460 pi4k2b (ENSPKIG00000000425) htra3a (ENSPKIG00000000381) ENSPKIG00000000345 CPZ (ENSPKIG00000000318) ENSPKIG00000000307 adra2c (ENSPKIG00000000297) lrpap1 (ENSPKIG00000000278) DOK7 (ENSPKIG00000000227) rgs12b (ENSPKIG00000000155) htt (ENSPKIG00000000098) grk4 (ENSPKIG00000000049) clgn (ENSPKIG00000000013) ##21 scoca (ENSPKIG00000025676) ENSPKIG00000025679 ##22 rab33ba (ENSPKIG00000025682) naa15b (ENSPKIG00000025693) NDUFC1 (ENSPKIG00000022143) elf2b (ENSPKIG00000022104) NOCT (ENSPKIG00000022066) Osteoglossiformes ANCESTRAL SPECIES 378 ENSGT00940000156526.b ##24 ENSGT00390000008828.ib ENSGT00950000183201.b.a.b.b ##22 ENSGT00940000160288 ENSGT00390000004827 ENSGT00390000008183 ENSGT00940000157090.h ENSGT00390000002932 ENSGT00950000183174.B.a.e ENSGT00390000002565 ENSGT01030000235247 ENSGT00940000154953.b.b ENSGT00940000155249.f P. kingsleyae MODERN SPECIES 167 ENSPKIG00000012825 zgc:154054 (ENSPKIG00000012856) ##24 SCOC (ENSPKIG00000012952) ENSPKIG00000012968 ##22 ENSPKIG00000012984 mgst2 (ENSPKIG00000012999) setd7 (ENSPKIG00000013022) zgc:113425 (ENSPKIG00000013062) RAB33B (ENSPKIG00000013084) mlsl (ENSPKIG00000013109) NAA15 (ENSPKIG00000013186) ENSPKIG00000013320 ENSPKIG00000013337 elf2b (ENSPKIG00000013350) NOCT (ENSPKIG00000013368) ENSPKIG00000013390 PCDH18 (ENSPKIG00000013435) ENSPKIG00000013461 pcdh10b (ENSPKIG00000013480) Asian bonytongue MODERN SPECIES 20 usp6nl (ENSSFOG00015026056) CELF2 (ENSSFOG00015023981) gata3 (ENSSFOG00015024332) taf3 (ENSSFOG00015023987) ENSSFOG00015029792 atp5f1c (ENSSFOG00015023991) kin (ENSSFOG00015032527) itih2 (ENSSFOG00015023997) ITIH5 (ENSSFOG00015023999) ppfibp1b (ENSSFOG00015024002) ENSSFOG00015024010 ENSSFOG00015024022 ENSSFOG00015032283 ENSSFOG00015024023 ##24 scocb (ENSSFOG00015024025) ENSSFOG00015024027 ##22 mgst2 (ENSSFOG00015028269) setd7 (ENSSFOG00015024029) RAB33B (ENSSFOG00015024034) mlsl (ENSSFOG00015024040) NAA15 (ENSSFOG00015024041) ENSSFOG00015027958 elf2b (ENSSFOG00015024045) NOCT (ENSSFOG00015027612) ENSSFOG00015024964 ENSSFOG00015024049 ENSSFOG00015024051 PCDH18 (ENSSFOG00015024052) pcdh10b (ENSSFOG00015032460) si:ch211-175m2.5 (ENSSFOG00015024057) ENSSFOG00015024058 Clupeocephala ANCESTRAL SPECIES 115 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000156295.g ENSGT00950000183174.B.a.f ENSGT00440000037338 ENSGT00940000154953.a ENSGT00940000155249.h ENSGT00940000166427 ENSGT00940000156295.h ENSGT00940000158277.b ENSGT00390000006284 ENSGT00730000111168 Otomorpha ANCESTRAL SPECIES 341 ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00950000183174.B.a.f ENSGT00440000037338 ENSGT00940000154953.a ENSGT00940000155249.h ENSGT00940000166427 ENSGT00940000156295.h ENSGT00940000158277.a ENSGT01030000234904 ENSGT00940000155249.g ENSGT00940000156295.g ENSGT00940000158277.b Otophysi ANCESTRAL SPECIES 139 ENSGT01100000263491.a.b.a.a.a.b.b.b.a.a ENSGT00390000015863 ENSGT00940000164407.a.a ENSGT00390000015386.a ENSGT00390000004855 ENSGT00940000161707.a.a ENSGT00940000162580.b.b ENSGT00940000165038.a ENSGT00940000156391.d ENSGT00950000183001.b.b.a ENSGT00940000159570.a ENSGT00940000157090.h ENSGT00950000183174.B.a.e ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00940000154259.b.b ENSGT00940000154810.jb ENSGT00940000162502.a ENSGT00940000157807.g.b Cyprinoidei ANCESTRAL SPECIES 22 ENSGT00940000153322.B.c ENSGT00390000015863 ENSGT00940000164407.a.a ENSGT00390000015386.a ENSGT00390000004855 ENSGT00940000161707.a.a ENSGT00940000162580.b.b ENSGT00940000165038.a ENSGT00940000156391.d ENSGT00950000183001.b.b.a ENSGT00940000159570.a ENSGT00940000157090.h ENSGT00950000183174.B.a.e ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00390000011517.a.a.c.a.b.a.c ENSGT00390000011517.a.a.c.a.b.a.d ENSGT00940000154259.b.b ENSGT00940000162502.a ENSGT00940000157807.g.b ENSGT01100000263483.F.a.eb ENSGT01100000263483.E.b.a.c.a.a ENSGT01100000263483.E.b.a.c.b.a.b ENSGT01100000263483.E.b.a.c.b.a.a ENSGT00940000156393.a.b.c ENSGT00520000058756 ENSGT00540000073610.A ENSGT00980000198603.B ENSGT00940000160334 ENSGT00390000001289.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 1876 ENSGT00950000183201.b.a.a.a ##22 ENSGT00950000183201.b.a.b.c ##22 Goldfish DUPLICATION Goldfish MODERN SPECIES 277 ENSCARG00000044810 ##22 TESK1 (ENSCARG00000044823) ENSCARG00000044849 ENSCARG00000044862 ENSCARG00000044869 ENSCARG00000044891 ENSCARG00000044914 cntf (ENSCARG00000044968) ccdc149b (ENSCARG00000045020) lgi2b (ENSCARG00000045315) cdk2ap2 (ENSCARG00000045363) aip (ENSCARG00000045389) SOD3 (ENSCARG00000045423) ing2 (ENSCARG00000045436) ENSCARG00000045456 irf2a (ENSCARG00000045479) Goldfish MODERN SPECIES 1575 ENSCARG00000037735 ##22 ENSCARG00000037747 ##22 TESK1 (ENSCARG00000037769) Cyprininae_a ANCESTRAL SPECIES 219 ENSGT00390000004855.e ENSGT00940000161707.a.a.c ENSGT00940000162580.b.b.d ENSGT00940000165038.a.e ENSGT00940000156391.d.c.a ENSGT00940000156391.d.d ENSGT00950000183001.b.b.a.b ENSGT00940000159570.a.b ENSGT01100000263541.a.a.b.a.a.b.a ENSGT01100000263541.a.a.b.a.a.b.b ENSGT00940000157090.h.a ENSGT00950000183174.B.a.e.e.b ENSGT00950000182915.a.a.b.b ##21 ENSGT00390000008828.fb.b.b ENSGT00950000183201.b.a.a.a ##22 ENSGT00950000183201.b.a.b.c ##22 ENSGT00940000154259.b.b.b ENSGT00940000162502.a.b ENSGT00940000157807.g.b.k.a ENSGT01100000263483.E.b.a.c.a.a.a.a Common carp reference MODERN SPECIES 27 DOK7 (ENSCCRG00000032118) lrpap1 (ENSCCRG00000032124) adra2c (ENSCCRG00000065027) hmx1 (ENSCCRG00000032131) hmx4 (ENSCCRG00000064526) ENSCCRG00000032148 htra3a (ENSCCRG00000024478) ENSCCRG00000041846 zgc:153642 (ENSCCRG00000052899) zgc:153642 (ENSCCRG00000019090) ENSCCRG00000059639 naa15b (ENSCCRG00000069209) clgn (ENSCCRG00000000597) ##21 scoca (ENSCCRG00000013811) ENSCCRG00000062927 ##22 ENSCCRG00000069258 ##22 zgc:56493 (ENSCCRG00000076188) faah2a (ENSCCRG00000017057) ENSCCRG00000004413 ENSCCRG00000053249 ENSCCRG00000023488 ENSCCRG00000025732 ENSCCRG00000054934 ENSCCRG00000057879 ENSCCRG00000077428 cntf (ENSCCRG00000025703) ENSCCRG00000067650 ccdc149b (ENSCCRG00000051986) lgi2b (ENSCCRG00000054335) aip (ENSCCRG00000051967) cdk2ap2 (ENSCCRG00000064036) Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 16 lrpap1 (ENSSGRG00000036737) adra2c (ENSSGRG00000036724) hmx1 (ENSSGRG00000036722) hmx4 (ENSSGRG00000036721) CPZ (ENSSGRG00000036683) GPR78 (ENSSGRG00000036681) htra3a (ENSSGRG00000036680) zgc:153642 (ENSSGRG00000036679) zgc:153642 (ENSSGRG00000036678) RAB33B (ENSSGRG00000036676) naa15b (ENSSGRG00000036390) clgn (ENSSGRG00000036268) ##21 scoca (ENSSGRG00000036266) ENSSGRG00000036264 ##22 ENSSGRG00000036263 ##22 ENSSGRG00000036262 ##22 ENSSGRG00000036261 zgc:56493 (ENSSGRG00000036260) faah2a (ENSSGRG00000036259) TESK1 (ENSSGRG00000036258) ENSSGRG00000036256 ENSSGRG00000036255 ENSSGRG00000036254 ENSSGRG00000036253 ENSSGRG00000036252 ENSSGRG00000036251 ENSSGRG00000036249 cntf (ENSSGRG00000036247) ccdc149b (ENSSGRG00000036241) lgi2b (ENSSGRG00000036237) cdk2ap2 (ENSSGRG00000036234) Golden-line barbel MODERN SPECIES 16 rgs12b (ENSSGRG00000037067) lrpap1 (ENSSGRG00000036737) adra2c (ENSSGRG00000036724) hmx1 (ENSSGRG00000036722) hmx4 (ENSSGRG00000036721) CPZ (ENSSGRG00000036683) GPR78 (ENSSGRG00000036681) htra3a (ENSSGRG00000036680) zgc:153642 (ENSSGRG00000036679) zgc:153642 (ENSSGRG00000036678) RAB33B (ENSSGRG00000036676) naa15b (ENSSGRG00000036390) clgn (ENSSGRG00000036268) ##21 scoca (ENSSGRG00000036266) ENSSGRG00000036264 ##22 ENSSGRG00000036263 ##22 ENSSGRG00000036262 ##22 ENSSGRG00000036261 zgc:56493 (ENSSGRG00000036260) faah2a (ENSSGRG00000036259) TESK1 (ENSSGRG00000036258) ENSSGRG00000036256 ENSSGRG00000036255 ENSSGRG00000036254 ENSSGRG00000036253 ENSSGRG00000036252 ENSSGRG00000036251 ENSSGRG00000036249 cntf (ENSSGRG00000036247) ccdc149b (ENSSGRG00000036241) lgi2b (ENSSGRG00000036237) Cyprininae ANCESTRAL SPECIES 169 ENSGT00390000017284.a.b.d.b ENSGT00390000015863.c ENSGT00940000164407.a.a.e ENSGT00390000015386.a.b ENSGT00390000004855.f ENSGT00940000161707.a.a.d ENSGT00940000162580.b.b.c ENSGT00940000165038.a.f ENSGT00940000156391.d.c.b ENSGT00950000183001.b.b.a.a ENSGT00940000159570.a.a ENSGT00940000157090.h.b ENSGT00950000183174.B.a.e.e.a ENSGT00950000182915.a.a.b.a ##21 ENSGT00390000008828.fb.b.a ENSGT00950000183201.b.a.b.d ##22 ENSGT00390000011517.a.a.c.a.b.a.c ENSGT00390000011517.a.a.c.a.b.a.d ENSGT00940000154259.b.b ENSGT00940000162502.a ENSGT00940000157807.g.b.k.b ENSGT01100000263483.F.a.eb ENSGT01100000263483.E.b.a.c.a.a.b Cyprininae_a ANCESTRAL SPECIES 76 ENSGT00390000017284.a.b.d.b ENSGT00390000015863.c ENSGT00940000164407.a.a.e ENSGT00390000015386.a.b ENSGT00390000004855.f ENSGT00940000161707.a.a.d ENSGT00940000162580.b.b.c ENSGT00940000165038.a.f ENSGT00940000156391.d.c.b ENSGT00950000183001.b.b.a.a ENSGT00940000159570.a.a ENSGT00940000157090.h.b ENSGT00950000183174.B.a.e.e.a ENSGT00950000182915.a.a.b.a ##21 ENSGT00390000008828.fb.b.a ENSGT00950000183201.b.a.b.d ##22 ENSGT00390000011517.a.a.c.a.b.a.c ENSGT00390000011517.a.a.c.a.b.a.d ENSGT00940000154259.b.b.a ENSGT00940000162502.a.a ENSGT00940000157807.g.b.l ENSGT01100000263483.E.b.a.c.b.a.b ENSGT01100000263483.E.b.a.c.b.a.a.b ENSGT00940000156393.a.b.c.b ENSGT00540000073610.A.a ENSGT00390000015958.c.a ENSGT00940000157294.c.b ENSGT00940000160334.p ENSGT00390000001289.a.f ENSGT00950000182996.b.a.a.b.d.a.f.a.a.a.a.b.b.a ENSGT00520000055589.d.a.b.b Golden-line barbel MODERN SPECIES 570 paip2b (ENSSGRG00000008873) htt (ENSSGRG00000008900) rgs12b (ENSSGRG00000009077) DOK7 (ENSSGRG00000009091) lrpap1 (ENSSGRG00000009097) adra2c (ENSSGRG00000009297) hmx1 (ENSSGRG00000009298) hmx4 (ENSSGRG00000009299) ENSSGRG00000009300 htra3a (ENSSGRG00000009304) RAB33B (ENSSGRG00000009305) naa15b (ENSSGRG00000009323) clgn (ENSSGRG00000009907) ##21 scoca (ENSSGRG00000010093) ENSSGRG00000010098 ##22 ENSSGRG00000010099 ##22 Common carp reference MODERN SPECIES 22 htt (ENSCCRG00000029374) rgs12b (ENSCCRG00000029622) DOK7 (ENSCCRG00000012914) lrpap1 (ENSCCRG00000012516) adra2c (ENSCCRG00000000657) hmx1 (ENSCCRG00000070286) hmx4 (ENSCCRG00000071347) ENSCCRG00000063031 ENSCCRG00000000645 GPR78 (ENSCCRG00000043794) htra3a (ENSCCRG00000062143) naa15b (ENSCCRG00000053315) clgn (ENSCCRG00000013821) ##21 scoca (ENSCCRG00000054316) ENSCCRG00000005171 ##22 ENSCCRG00000079931 ##22 ENSCCRG00000063458 ENSCCRG00000061939 ENSCCRG00000000441 zgc:56493 (ENSCCRG00000071331) faah2a (ENSCCRG00000058192) ENSCCRG00000023502 ENSCCRG00000023521 ENSCCRG00000056721 ENSCCRG00000073840 ENSCCRG00000077796 ENSCCRG00000056872 cntf (ENSCCRG00000059766) ccdc149b (ENSCCRG00000051983) lgi2b (ENSCCRG00000051972) cdk2ap2 (ENSCCRG00000051969) Zebrafish MODERN SPECIES htt (ENSDARG00000052866) rgs12b (ENSDARG00000036774) DOK7 (ENSDARG00000060236) lrpap1 (ENSDARG00000033604) adra2c (ENSDARG00000069669) hmx1 (ENSDARG00000095651) hmx4 (ENSDARG00000007941) CPZ (ENSDARG00000075521) GPR78 (ENSDARG00000074600) htra3a (ENSDARG00000052895) zgc:153642 (ENSDARG00000052900) ENSDARG00000052899 naa15b (ENSDARG00000030368) clgn (ENSDARG00000009315) ##21 scoca (ENSDARG00000087333) ENSDARG00000079552 ##22 ENSDARG00000069710 ENSDARG00000077874 TXN (ENSDARG00000031435) faah2a (ENSDARG00000008457) TESK1 (ENSDARG00000078251) si:ch211-113e8.5 (ENSDARG00000069707) ENSDARG00000074610 ENSDARG00000109438 ENSDARG00000095065 zgc:194443 (ENSDARG00000078182) zgc:152658 (ENSDARG00000018587) ENSDARG00000079631 ENSDARG00000076585 cntf (ENSDARG00000074662) ENSDARG00000093120 Characiphysae ANCESTRAL SPECIES 9 ENSGT00390000017284.a.b.d ENSGT00390000015863 ENSGT00940000164407.a.a ENSGT00390000015386.a ENSGT00390000004855 ENSGT00940000161707.a.a ENSGT00940000162580.b.b ENSGT00940000165038.a ENSGT00940000156391.d ENSGT00950000183001.b.b.a ENSGT00940000159570.a ENSGT00940000157090.h ENSGT00950000183174.B.a.e ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00940000154259.b.b ENSGT00940000154810.jb ENSGT00940000162502.a ENSGT00940000157807.g.b ENSGT01100000263483.E.b.a.c.b ENSGT00940000155140.s ENSGT00940000158059.g ENSGT00940000159660.j ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000004446 ENSGT00930000150973.B.e.b ENSGT00940000158244 ENSGT00940000154950.y.a Channel catfish MODERN SPECIES 22 rgs12 (ENSIPUG00000010028) ENSIPUG00000010020 ENSIPUG00000009998 dok7 (ENSIPUG00000009960) lrpap1 (ENSIPUG00000009951) adra2c (ENSIPUG00000009930) ENSIPUG00000009921 HMX2 (ENSIPUG00000009916) GPR78 (ENSIPUG00000009901) CPZ (ENSIPUG00000009872) htra3a (ENSIPUG00000009826) ENSIPUG00000009784 NAA15 (ENSIPUG00000009655) clgn (ENSIPUG00000009536) ##21 scoca (ENSIPUG00000009524) maml3 (ENSIPUG00000009517) ##22 zgc:56493 (ENSIPUG00000009504) PTGR1 (ENSIPUG00000009465) faah2a (ENSIPUG00000009449) ENSIPUG00000009411 ENSIPUG00000009403 ENSIPUG00000009345 ENSIPUG00000009331 ENSIPUG00000009321 ENSIPUG00000009313 ENSIPUG00000009291 CASP6 (ENSIPUG00000009042) ENSIPUG00000009010 mcub (ENSIPUG00000009001) LEF1 (ENSIPUG00000008946) hadh (ENSIPUG00000008863) Characiphysae_b ANCESTRAL SPECIES 76 ENSGT00940000161707.a.a ENSGT00940000162580.b.b ENSGT00940000165038.a ENSGT00940000156391.d ENSGT00950000183001.b.b.a ENSGT01100000263483.F.a.eb ENSGT01100000263541.a.a.b.a.a.b ENSGT00940000159570.a ENSGT00940000157090.h ENSGT00950000183174.B.a.e ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT01030000234601.r.a.c ENSGT00940000154259.b.b ENSGT00940000154810.jb ENSGT00940000162502.a ENSGT00940000157807.g.b ENSGT01100000263483.E.b.a.c.b ENSGT00940000155140.s ENSGT00940000158059.g ENSGT00940000159660.j ENSGT00940000159984 ENSGT00940000157714 ENSGT00940000157370.b ENSGT00390000004446 ENSGT00930000150973.B.e.b ENSGT00940000158244 Characoidei ANCESTRAL SPECIES 236 ENSGT00940000161707.a.a ENSGT00940000162580.b.a ENSGT00940000165038.a ENSGT00940000156391.d ENSGT00950000183001.b.b.a ENSGT01100000263483.F.a.eb ENSGT01100000263541.a.a.b.a.a.b ENSGT00940000159570.a ENSGT00940000157090.h ENSGT00950000183174.B.a.e ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT01030000234601.r.a.c.a.b ENSGT00940000154259.b.b ENSGT00940000154810.jb ENSGT00940000162502.a ENSGT00940000157807.g.b Red-bellied piranha MODERN SPECIES 165 cdo1 (ENSPNAG00000002994) adra2c (ENSPNAG00000013950) HMX1 (ENSPNAG00000013963) hmx4 (ENSPNAG00000013967) CPZ (ENSPNAG00000014013) GPR78 (ENSPNAG00000014031) ENSPNAG00000014035 zgc:153642 (ENSPNAG00000003012) ENSPNAG00000014076 zgc:153642 (ENSPNAG00000014086) htra3a (ENSPNAG00000014134) RAB33B (ENSPNAG00000014146) naa15b (ENSPNAG00000014200) clgn (ENSPNAG00000003056) ##21 scoca (ENSPNAG00000014265) ENSPNAG00000014273 ##22 ENSPNAG00000014284 faah2a (ENSPNAG00000014325) TESK1 (ENSPNAG00000014338) ENSPNAG00000014348 ENSPNAG00000014355 ENSPNAG00000014369 ENSPNAG00000014384 TCIRG1 (ENSPNAG00000014408) kdm2aa (ENSPNAG00000014432) stx3a (ENSPNAG00000014482) ndufs8a (ENSPNAG00000014504) ENSPNAG00000014522 TMEM187 (ENSPNAG00000014529) p2rx3b (ENSPNAG00000014553) SSRP1 (ENSPNAG00000014761) Mexicana tetra MODERN SPECIES 17 ENSAMXG00000030152 ENSAMXG00000010283 paip2b (ENSAMXG00000038609) ENSAMXG00000037213 htt (ENSAMXG00000010292) rgs12b (ENSAMXG00000010300) ENSAMXG00000033089 lrpap1 (ENSAMXG00000031077) ENSAMXG00000040229 ENSAMXG00000043607 htra3a (ENSAMXG00000005303) ENSAMXG00000037428 naa15b (ENSAMXG00000005342) clgn (ENSAMXG00000005367) ##21 scoca (ENSAMXG00000043358) ENSAMXG00000005387 ##22 ENSAMXG00000040199 ENSAMXG00000033734 ENSAMXG00000038050 ENSAMXG00000031340 ENSAMXG00000041408 ENSAMXG00000031908 zgc:56493 (ENSAMXG00000031017) PTGR1 (ENSAMXG00000032623) faah2a (ENSAMXG00000005461) TESK1 (ENSAMXG00000032728) ENSAMXG00000028341 ENSAMXG00000005499 ENSAMXG00000039708 ENSAMXG00000043693 herc3 (ENSAMXG00000005512) Electric eel DUPLICATION Electric eel MODERN SPECIES 1082 ENSEEEG00000020958 ##22 ENSEEEG00000020957 ENSEEEG00000020956 ENSEEEG00000020955 zgc:56493 (ENSEEEG00000020954) ENSEEEG00000020952 ppm1kb (ENSEEEG00000020951) pkd2 (ENSEEEG00000020909) papss1 (ENSEEEG00000020489) Electric eel MODERN SPECIES 636 adra2c (ENSEEEG00000013942) hmx1 (ENSEEEG00000013943) hmx4 (ENSEEEG00000013945) CPZ (ENSEEEG00000013949) ENSEEEG00000013966 zgc:153642 (ENSEEEG00000013967) htra3a (ENSEEEG00000013976) ENSEEEG00000014048 naa15b (ENSEEEG00000014084) clgn (ENSEEEG00000015065) ##21 scoca (ENSEEEG00000015116) ENSEEEG00000015117 ##22 Clupeiformes ANCESTRAL SPECIES 22 ENSGT00940000159958.c ENSGT00990000207961 ENSGT00390000009223 ENSGT00940000156167.b ENSGT01030000234566.e.b.a.a.a.a ENSGT00940000153676.a ENSGT00410000025556.a.a.a.b.a ENSGT00940000157580.a.b ENSGT00850000132319.a.a.b ENSGT00530000063255.B ENSGT00390000006192 ENSGT00390000013015 ENSGT00530000063669.a ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000156295.g ENSGT00940000158277.b ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000160151 ENSGT00390000015863 ENSGT00940000164407.a.a ENSGT00390000015386.a ENSGT00390000004855 ENSGT00940000161707.a.a Denticle herring MODERN SPECIES 14 spcs3 (ENSDCDG00000015869) vegfc (ENSDCDG00000015874) TENM3 (ENSDCDG00000016011) ENSDCDG00000019544 dctd (ENSDCDG00000019547) WWC2 (ENSDCDG00000019561) clockb (ENSDCDG00000019632) kitb (ENSDCDG00000020603) clrn2 (ENSDCDG00000021002) lap3 (ENSDCDG00000021005) med28 (ENSDCDG00000021128) ENSDCDG00000021130 fam184b (ENSDCDG00000021137) ENSDCDG00000021161 scoca (ENSDCDG00000021836) ENSDCDG00000021842 ##22 naa15b (ENSDCDG00000021850) RAB33B (ENSDCDG00000022054) elf2b (ENSDCDG00000022060) NOCT (ENSDCDG00000022062) pcdh18a (ENSDCDG00000022064) pcdh10a (ENSDCDG00000022066) zgc:77739 (ENSDCDG00000022069) SCLT1 (ENSDCDG00000022079) grk4 (ENSDCDG00000022320) htt (ENSDCDG00000024621) rgs12b (ENSDCDG00000027950) DOK7 (ENSDCDG00000027960) lrpap1 (ENSDCDG00000027965) adra2c (ENSDCDG00000027977) ENSDCDG00000027980 Atlantic herring MODERN SPECIES 14 asb5b (ENSCHAG00000006570) spcs3 (ENSCHAG00000006598) vegfc (ENSCHAG00000006654) TENM3 (ENSCHAG00000006766) dctd (ENSCHAG00000010185) ENSCHAG00000010259 ENSCHAG00000010243 clockb (ENSCHAG00000010310) kitb (ENSCHAG00000012047) clrn2 (ENSCHAG00000012507) lap3 (ENSCHAG00000012553) med28 (ENSCHAG00000013382) fam184b (ENSCHAG00000013410) clgn (ENSCHAG00000013427) ##21 scoca (ENSCHAG00000013928) ENSCHAG00000013941 ##22 ENSCHAG00000014006 naa15b (ENSCHAG00000014034) RAB33B (ENSCHAG00000015145) elf2b (ENSCHAG00000015150) NOCT (ENSCHAG00000015160) pcdh18a (ENSCHAG00000015168) pcdh10a (ENSCHAG00000015186) zgc:77739 (ENSCHAG00000015252) SCLT1 (ENSCHAG00000015265) grk4 (ENSCHAG00000015343) htt (ENSCHAG00000017705) rgs12b (ENSCHAG00000019293) DOK7 (ENSCHAG00000019357) lrpap1 (ENSCHAG00000019384) ENSCHAG00000019922 Euteleosteomorpha ANCESTRAL SPECIES 215 ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT01050000245024 ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000177650 ENSGT00940000156295.g ENSGT00940000158277.b ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000154761 ENSGT00940000154617.A.a.a ENSGT00940000156892.b ENSGT00940000158062.f.a ENSGT00940000158708.a Protacanthopterygii ANCESTRAL SPECIES 134 ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT01050000245024 ENSGT00870000137155 ENSGT00390000008828.fb.b ENSGT00950000182915.a.a.b ##21 ENSGT00950000183130.A ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00970000196926 ENSGT00940000156295.g ENSGT00940000158277.b ENSGT00390000006284 ENSGT00730000111168 ENSGT00940000154761.ac.a ENSGT00940000154617.A.a.a ENSGT00940000156892.b ENSGT00940000158062.f.a ENSGT00940000158708.a ENSGT00950000182932.B.a Salmoninae ANCESTRAL SPECIES ENSGT00950000183201.b.a.b ##22 Huchen MODERN SPECIES 6101 ENSHHUG00000015881 ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000183201.b.a.b ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183201.b.a.b ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000183201.b.a.b ##22 Chinook salmon MODERN SPECIES 1806 ENSOTSG00005019051 ##22 Rainbow trout MODERN SPECIES 319 ENSOMYG00000026774 ENSOMYG00000067872 ENSOMYG00000023605 ENSOMYG00000075831 ENSOMYG00000077848 ENSOMYG00000057571 ENSOMYG00000024085 ENSOMYG00000058842 ENSOMYG00000039732 ENSOMYG00000057619 ##21 ENSOMYG00000076823 ENSOMYG00000022200 clgn (ENSOMYG00000057030) ##21 ENSOMYG00000062069 ENSOMYG00000059195 ENSOMYG00000058571 ##22 ENSOMYG00000059711 ENSOMYG00000074117 elf2b (ENSOMYG00000066604) NOCT (ENSOMYG00000052018) ENSOMYG00000058250 ENSOMYG00000048910 ENSOMYG00000055841 pcdh18a (ENSOMYG00000056171) Salmo ANCESTRAL SPECIES ENSGT00950000183201.b.a.b ##22 River trout MODERN SPECIES 83 ENSSTUG00000038311 ##22 Northern pike MODERN SPECIES 24 ENSELUG00000010981 ENSELUG00000028614 RNF38 (ENSELUG00000032719) CRIP2 (ENSELUG00000026773) CI105 (ENSELUG00000011089) ENSELUG00000000391 ENSELUG00000011127 ENSELUG00000011134 ENSELUG00000011185 ENSELUG00000011159 ENSELUG00000011192 scoca (ENSELUG00000002591) SCOC (ENSELUG00000030421) clgn (ENSELUG00000011262) ##21 exosc9 (ENSELUG00000011222) ENSELUG00000011295 ##22 naa15b (ENSELUG00000011339) ENSELUG00000011352 elf2b (ENSELUG00000011388) NOCT (ENSELUG00000011415) ENSELUG00000011429 pcdh18a (ENSELUG00000011442) pcdh10a (ENSELUG00000000410) SCLT1 (ENSELUG00000011546) zgc:77739 (ENSELUG00000011495) DNAH6 (ENSELUG00000011602) ENSELUG00000011626 chrnb3a (ENSELUG00000001063) chrna6 (ENSELUG00000000426) ENSELUG00000001511 ENSELUG00000011836 Acanthomorphata ANCESTRAL SPECIES 44 ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT01050000245024 ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000158431.a.a.a.a.a.a.d.b.a.b ENSGT00940000157622.a.a ENSGT01100000263556.a.a.q.d ENSGT01020000230338.a.b.a ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d Euacanthomorphacea ANCESTRAL SPECIES 3 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT01100000263556.a.a.q.d ENSGT01020000230338.a.b.a ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B Pinecone sodierfish MODERN SPECIES ccdc40 (ENSMMDG00005007031) TEX2 (ENSMMDG00005007027) ENSMMDG00005006920 ENSMMDG00005006827 ENSMMDG00005006779 AXIN2 (ENSMMDG00005006763) ENSMMDG00005006754 ENSMMDG00005006745 ENSMMDG00005006741 ENSMMDG00005006739 ENSMMDG00005006737 ENSMMDG00005006735 exosc9 (ENSMMDG00005006725) clgn (ENSMMDG00005003291) ##21 scoca (ENSMMDG00005003212) ENSMMDG00005003208 ##22 ENSMMDG00005003205 naa15b (ENSMMDG00005001073) RAB33B (ENSMMDG00005001047) elf2b (ENSMMDG00005001044) NOCT (ENSMMDG00005001038) ENSMMDG00005001036 ENSMMDG00005001032 slc43a3a (ENSMMDG00005001031) ENSMMDG00005001029 slc43a3a (ENSMMDG00005001026) ENSMMDG00005001025 CTNND1 (ENSMMDG00005000863) timm10 (ENSMMDG00005000851) unc93b1 (ENSMMDG00005000840) ENSMMDG00005000837 Percomorphaceae ANCESTRAL SPECIES 20 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b Tiger tail seahorse MODERN SPECIES 382 ENSHCOG00000013390 AXIN2 (ENSHCOG00000013373) ENSHCOG00000013357 ENSHCOG00000013341 TEX2 (ENSHCOG00000013335) ENSHCOG00000013300 ENSHCOG00000013281 ENSHCOG00000013272 ENSHCOG00000013266 ENSHCOG00000013258 ENSHCOG00000013219 ENSHCOG00000013016 exosc9 (ENSHCOG00000013001) clgn (ENSHCOG00000012943) ##21 scoca (ENSHCOG00000012921) ENSHCOG00000012903 ##22 naa15b (ENSHCOG00000012888) RAB33B (ENSHCOG00000012834) ENSHCOG00000012825 ENSHCOG00000012810 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00990000203987 ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000177894 ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B Ovalentaria ANCESTRAL SPECIES ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00990000203866 ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00990000203987 ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000177894 ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000156045.b ENSGT00940000171111.e ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b Ovalentaria_B ANCESTRAL SPECIES 4 ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00990000203866 ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00990000203987 ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000177894 ENSGT00940000156045.b ENSGT00940000171111.e ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b ENSGT00950000182932.B.a ENSGT01020000230338.a.a Pomacentridae ANCESTRAL SPECIES 161 ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 Bicolor damselfish MODERN SPECIES 754 ENSSPAG00000003602 ENSSPAG00000003715 ENSSPAG00000003758 ENSSPAG00000003795 ENSSPAG00000003876 exosc9 (ENSSPAG00000003892) clgn (ENSSPAG00000003920) ##21 scoca (ENSSPAG00000003985) ENSSPAG00000004004 ##22 Pomacentridae_A ANCESTRAL SPECIES 13 ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00550000075186 ENSGT00940000159603.b ENSGT00940000157351 ENSGT01070000253837.c ENSGT00640000091541 ENSGT01060000248591.a.a.b.a.b ENSGT00390000011880.b ENSGT00940000176115 ENSGT00940000168473 ENSGT00940000155386.a ENSGT00940000165433 ENSGT00940000164979.f.a.e ENSGT00940000164979.f.b ENSGT00940000164979.f.a.f Amphiprion ANCESTRAL SPECIES ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b.g ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00550000075186 ENSGT00940000159603.b ENSGT00940000157351 ENSGT01070000253837.c ENSGT00640000091541 ENSGT01060000248591.a.a.b.a.b ENSGT00390000011880.b ENSGT00940000176115 ENSGT00940000168473 ENSGT00940000155386.a ENSGT00940000165433 ENSGT00940000164979.f.a.e ENSGT00940000164979.f.a.f ENSGT00940000158604 Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 2459 ENSAOCG00000001542 ##22 naa15b (ENSAOCG00000020980) Clown anemonefish MODERN SPECIES 1635 CBX4 (ENSAOCG00000023097) ENSAOCG00000023147 ccdc40 (ENSAOCG00000023211) TEX2 (ENSAOCG00000023232) ENSAOCG00000023237 prf1.2 (ENSAOCG00000023328) AXIN2 (ENSAOCG00000023394) ENSAOCG00000023430 ENSAOCG00000023506 ENSAOCG00000023532 ENSAOCG00000023550 ENSAOCG00000023575 exosc9 (ENSAOCG00000023602) clgn (ENSAOCG00000023639) ##21 scoca (ENSAOCG00000023654) ENSAOCG00000023665 ##22 naa15b (ENSAOCG00000023893) ENSAOCG00000023954 Orange clownfish MODERN SPECIES 17 ENSAPEG00000015378 ENSAPEG00000015268 ccdc40 (ENSAPEG00000015226) TEX2 (ENSAPEG00000015194) ENSAPEG00000015181 prf1.2 (ENSAPEG00000015003) AXIN2 (ENSAPEG00000014887) ENSAPEG00000014812 ENSAPEG00000014650 ENSAPEG00000014483 ENSAPEG00000014464 ENSAPEG00000014452 exosc9 (ENSAPEG00000014416) clgn (ENSAPEG00000014377) ##21 scoca (ENSAPEG00000014359) ENSAPEG00000014342 ##22 naa15b (ENSAPEG00000014226) ENSAPEG00000014195 anapc11 (ENSAPEG00000014187) ppp1r27b (ENSAPEG00000014175) p4hb (ENSAPEG00000014138) ENSAPEG00000014071 RPTOR (ENSAPEG00000013927) NPTX1 (ENSAPEG00000013867) ENSAPEG00000013817 ENSAPEG00000013796 SEC14L1 (ENSAPEG00000013704) ENSAPEG00000013625 trim25 (ENSAPEG00000013603) ENSAPEG00000013598 dgke (ENSAPEG00000013543) Spiny chromis MODERN SPECIES 368 ENSAPOG00000001187 ENSAPOG00000001188 ENSAPOG00000001192 ENSAPOG00000001194 ENSAPOG00000001198 exosc9 (ENSAPOG00000001202) clgn (ENSAPOG00000001207) ##21 scoca (ENSAPOG00000001211) ENSAPOG00000001214 ##22 naa15b (ENSAPOG00000001222) anapc11 (ENSAPOG00000001227) ppp1r27b (ENSAPOG00000000006) p4hb (ENSAPOG00000001235) Cichlidae ANCESTRAL SPECIES 3 ENSGT00940000156045.b ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00990000203866 ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00990000203987 ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000177894 Midas cichlid MODERN SPECIES 605 exosc9 (ENSACIG00000013514) clgn (ENSACIG00000013370) ##21 scoca (ENSACIG00000013334) ENSACIG00000013330 ##22 naa15b (ENSACIG00000013277) ENSACIG00000013119 elf2b (ENSACIG00000013086) NOCT (ENSACIG00000013054) Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00990000203866 ENSGT00530000063725.o.t.b.a ENSGT00530000063725.o.t.b.b ENSGT00530000063725.o.t.a.a ENSGT00530000063725.o.t.a.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00990000203987 ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000177894 ENSGT00940000160081.c.a ENSGT00940000158476.a ENSGT00390000006555 ENSGT00940000158604 ENSGT00940000164979.f.b ENSGT00940000164979.f.a.j ENSGT00940000164979.f.a.i ENSGT00940000165433 ENSGT00940000155386.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 5 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00990000203866 ENSGT00530000063725.o.t.b.a ENSGT00530000063725.o.t.b.b ENSGT00530000063725.o.t.a.a ENSGT00530000063725.o.t.a.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00990000203987 ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000160081.c.a ENSGT00940000158476.a ENSGT00390000006555 ENSGT00940000158604 ENSGT00940000164979.f.b ENSGT00940000164979.f.a.j ENSGT00940000164979.f.a.i ENSGT00940000165433 Haplochromini ANCESTRAL SPECIES 3 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o.t.b.a.b.a.a ENSGT00530000063725.o.t.a.a ENSGT00530000063725.o.t.a.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.a.a.c ENSGT00940000163234.a.b.h.a.a.a.d ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00990000203987 ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000160081.c.a ENSGT00940000158476.a ENSGT00390000006555 ENSGT00940000158604 ENSGT00940000164979.f.b.a.a ENSGT00940000164979.f.a.j ENSGT00940000164979.f.a.i ENSGT00940000165433 Haplochromini_A ANCESTRAL SPECIES 2 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o.t.b.a.b.a.a ENSGT00530000063725.o.t.a.a ENSGT00530000063725.o.t.a.b ENSGT00940000157338.a ENSGT00950000184095 ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.a.a.c ENSGT00940000163234.a.b.h.a.a.a.d ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00990000203987 ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000160081.c.a ENSGT00940000158476.a ENSGT00390000006555 ENSGT00940000158604 ENSGT00940000164979.f.b.a.a ENSGT00940000164979.f.a.j ENSGT00940000164979.f.a.i ENSGT00940000165433 Haplochromini_B ANCESTRAL SPECIES 23 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o.t.b.a.b.b ENSGT00530000063725.o.t.a.a ENSGT00530000063725.o.t.a.b ENSGT00940000157338.a ENSGT00950000184095 ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.a.a.c ENSGT00940000163234.a.b.h.a.a.a.d ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000160081.c.a ENSGT00940000158476.a ENSGT00390000006555 ENSGT00940000158604 ENSGT00940000164979.f.b.a.a ENSGT00940000164979.f.a.j ENSGT00940000164979.f.a.i ENSGT00940000165433 ENSGT00940000155386.a Eastern happy MODERN SPECIES 18 ENSACLG00000012408 ENSACLG00000012258 PRF1 (ENSACLG00000012116) ENSACLG00000012017 ENSACLG00000011985 AXIN2 (ENSACLG00000011830) ENSACLG00000011809 ENSACLG00000011751 ENSACLG00000011732 ENSACLG00000011701 ENSACLG00000011497 ENSACLG00000011487 exosc9 (ENSACLG00000011471) clgn (ENSACLG00000011446) ##21 scoca (ENSACLG00000011441) ENSACLG00000011431 ##22 naa15b (ENSACLG00000010983) ENSACLG00000010965 elf2b (ENSACLG00000010872) NOCT (ENSACLG00000010843) ENSACLG00000010825 slc43a3a (ENSACLG00000010757) CBX4 (ENSACLG00000010604) cbx8b (ENSACLG00000010589) si:dkey-31g6.6 (ENSACLG00000010576) dgke (ENSACLG00000010534) ENSACLG00000010517 trim25 (ENSACLG00000010499) trim25 (ENSACLG00000010425) ENSACLG00000010381 SEC14L1 (ENSACLG00000010354) Zebra mbuna MODERN SPECIES 1109 ENSMZEG00005011269 ENSMZEG00005011273 PRF1 (ENSMZEG00005011276) ENSMZEG00005011281 AXIN2 (ENSMZEG00005011288) ENSMZEG00005011302 ENSMZEG00005011308 ENSMZEG00005011323 ENSMZEG00005011339 ENSMZEG00005011367 ENSMZEG00005011438 ENSMZEG00005011448 exosc9 (ENSMZEG00005011461) clgn (ENSMZEG00005011482) ##21 scoca (ENSMZEG00005011510) ENSMZEG00005011533 ##22 naa15b (ENSMZEG00005011551) ENSMZEG00005011586 elf2b (ENSMZEG00005011602) NOCT (ENSMZEG00005011616) ENSMZEG00005011625 slc43a3a (ENSMZEG00005011638) CBX4 (ENSMZEG00005011680) cbx8b (ENSMZEG00005011686) si:dkey-31g6.6 (ENSMZEG00005011695) dgke (ENSMZEG00005011708) ENSMZEG00005011721 trim25 (ENSMZEG00005011727) trim25 (ENSMZEG00005011739) ENSMZEG00005011764 SEC14L1 (ENSMZEG00005011816) P. nyererei MODERN SPECIES 370 TEX2 (ENSPNYG00000004310) ENSPNYG00000004302 ENSPNYG00000004244 ENSPNYG00000004224 ENSPNYG00000004210 AXIN2 (ENSPNYG00000004181) ENSPNYG00000004161 ENSPNYG00000004060 ENSPNYG00000003954 ENSPNYG00000003868 ENSPNYG00000003730 ENSPNYG00000003702 ENSPNYG00000003693 clgn (ENSPNYG00000003640) ##21 scoca (ENSPNYG00000003623) ENSPNYG00000003608 ##22 naa15b (ENSPNYG00000003539) ENSPNYG00000003511 ENSPNYG00000003499 elf2b (ENSPNYG00000003464) NOCT (ENSPNYG00000003447) ENSPNYG00000003434 slc43a3a (ENSPNYG00000003389) ENSPNYG00000003370 CBX4 (ENSPNYG00000003363) cbx8b (ENSPNYG00000003357) si:dkey-31g6.6 (ENSPNYG00000003338) dgke (ENSPNYG00000003302) ENSPNYG00000003287 trim25 (ENSPNYG00000003275) trim25 (ENSPNYG00000003210) Burton s mouthbrooder MODERN SPECIES 297 ENSHBUG00000001825 exosc9 (ENSHBUG00000001818) clgn (ENSHBUG00000001792) ##21 scoca (ENSHBUG00000001769) ENSHBUG00000001759 ##22 naa15b (ENSHBUG00000001746) ENSHBUG00000001714 elf2b (ENSHBUG00000001702) NOCT (ENSHBUG00000001687) ENSHBUG00000001679 slc43a3a (ENSHBUG00000001670) CBX4 (ENSHBUG00000001658) cbx8b (ENSHBUG00000001652) si:dkey-31g6.6 (ENSHBUG00000001646) dgke (ENSHBUG00000001637) ENSHBUG00000001629 trim25 (ENSHBUG00000000937) trim25 (ENSHBUG00000001614) ENSHBUG00000001603 SEC14L1 (ENSHBUG00000001582) Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 197 ENSNBRG00000001165 ##22 Lyretail cichlid MODERN SPECIES 355 ENSNBRG00000019279 exosc9 (ENSNBRG00000019108) clgn (ENSNBRG00000019015) ##21 scoca (ENSNBRG00000018991) ENSNBRG00000018982 ##22 naa15b (ENSNBRG00000018238) ENSNBRG00000017996 elf2b (ENSNBRG00000017978) NOCT (ENSNBRG00000017964) ENSNBRG00000017952 slc43a3a (ENSNBRG00000017894) ENSNBRG00000017865 ENSNBRG00000017840 si:dkey-31g6.6 (ENSNBRG00000017831) dgke (ENSNBRG00000017802) trim25 (ENSNBRG00000017765) ENSNBRG00000017746 ENSNBRG00000017731 ENSNBRG00000017721 ENSNBRG00000017706 Atherinomorphae ANCESTRAL SPECIES 23 ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000177894 ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000156045.b ENSGT00940000171111.e ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b Oryzias ANCESTRAL SPECIES 15 ENSGT00940000164979.f.b ENSGT00940000158604 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000177894 ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000153676.a ENSGT01030000234566.e.b.a.a.a.a ENSGT00940000156167.b ENSGT00390000004697 ENSGT00940000153322.B.c ENSGT00940000165823.d Oryzias_a ANCESTRAL SPECIES 31 ENSGT00940000165433 ENSGT00940000164979.f.a ENSGT00940000158604 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000153676.a ENSGT01030000234566.e.b.a.a.a.a ENSGT00940000156167.b ENSGT00390000004697 ENSGT00940000153322.B.c ENSGT00940000165823.d ENSGT01040000240400.c.a.b.a.b.a.b ENSGT00940000157122.b.b Chinese medaka MODERN SPECIES 2372 ENSOSIG00000013442 ##22 Japanese Medaka HdrR MODERN SPECIES ENSORLG00000001826 dgke (ENSORLG00000001839) si:dkey-31g6.6 (ENSORLG00000001844) cbx8b (ENSORLG00000028607) CBX4 (ENSORLG00000027995) ENSORLG00000022102 ENSORLG00000001884 ccdc40 (ENSORLG00000001899) ENSORLG00000001916 AXIN2 (ENSORLG00000001945) ENSORLG00000025638 slc47a2.2 (ENSORLG00000001967) exosc9 (ENSORLG00000001989) clgn (ENSORLG00000002011) ##21 scoca (ENSORLG00000002015) ENSORLG00000028392 ##22 ENSORLG00000025469 naa15b (ENSORLG00000002063) ENSORLG00000002071 elf2b (ENSORLG00000002091) NOCT (ENSORLG00000002100) ENSORLG00000023189 slc43a3a (ENSORLG00000002116) dctd (ENSORLG00000002127) ENSORLG00000002165 vegfc (ENSORLG00000002180) ENSORLG00000029382 ENSORLG00000002191 ENSORLG00000022778 ENSORLG00000002209 ENSORLG00000028979 Oryzias_b ANCESTRAL SPECIES 34 ENSGT00940000164979.f.a ENSGT00940000164979.f.b ENSGT00940000158604 ENSGT00390000006555 ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000177894 ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000153676.a ENSGT01030000234566.e.b.a.a.a.a ENSGT00940000156167.b ENSGT00390000004697 ENSGT00940000168028 ENSGT00940000165823.d Javanese ricefish MODERN SPECIES dgke (ENSOJAG00000006700) si:dkey-31g6.6 (ENSOJAG00000006668) ENSOJAG00000006648 ENSOJAG00000006616 CARD14 (ENSOJAG00000006361) ccdc40 (ENSOJAG00000006332) TEX2 (ENSOJAG00000006273) ENSOJAG00000006260 AXIN2 (ENSOJAG00000006253) ENSOJAG00000006241 slc47a2.2 (ENSOJAG00000006223) exosc9 (ENSOJAG00000006174) clgn (ENSOJAG00000004056) ##21 scoca (ENSOJAG00000003640) ENSOJAG00000022145 ENSOJAG00000022141 ##22 ENSOJAG00000022138 naa15b (ENSOJAG00000022103) RAB33B (ENSOJAG00000022099) elf2b (ENSOJAG00000022092) NOCT (ENSOJAG00000022083) ENSOJAG00000022075 ENSOJAG00000022066 dctd (ENSOJAG00000022053) atf1 (ENSOJAG00000022043) TENM3 (ENSOJAG00000019297) vegfc (ENSOJAG00000018818) ENSOJAG00000018807 ENSOJAG00000018795 ENSOJAG00000018773 ENSOJAG00000018743 Indian medaka MODERN SPECIES 21 ENSOMEG00000022396 dgke (ENSOMEG00000022365) si:dkey-31g6.6 (ENSOMEG00000022307) ENSOMEG00000022294 CBX4 (ENSOMEG00000022265) CARD14 (ENSOMEG00000022234) TEX2 (ENSOMEG00000022181) ENSOMEG00000022165 AXIN2 (ENSOMEG00000022147) ENSOMEG00000022104 ENSOMEG00000022070 slc47a2.1 (ENSOMEG00000022014) exosc9 (ENSOMEG00000021965) clgn (ENSOMEG00000021923) ##21 scoca (ENSOMEG00000000577) ENSOMEG00000021819 ##22 ENSOMEG00000021806 naa15b (ENSOMEG00000021786) ENSOMEG00000021726 elf2b (ENSOMEG00000021691) NOCT (ENSOMEG00000021625) ENSOMEG00000021602 ENSOMEG00000021588 slc43a3a (ENSOMEG00000021570) dctd (ENSOMEG00000021534) TENM3 (ENSOMEG00000021448) ENSOMEG00000021371 vegfc (ENSOMEG00000021355) ENSOMEG00000021322 ENSOMEG00000000562 ENSOMEG00000021246 Cyprinodontiformes ANCESTRAL SPECIES 24 ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000177894 ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000156045.b ENSGT00940000171111.e ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b Aplocheiloidei ANCESTRAL SPECIES 31 ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000156045.b ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b ENSGT01020000230338.a.a ENSGT00940000164685.a Mangrove rivulus MODERN SPECIES 175 CBX4 (ENSKMAG00000020513) CARD14 (ENSKMAG00000020488) ccdc40 (ENSKMAG00000020460) TEX2 (ENSKMAG00000020442) ENSKMAG00000020424 ENSKMAG00000020399 AXIN2 (ENSKMAG00000020364) ENSKMAG00000020334 slc47a2.1 (ENSKMAG00000020263) ENSKMAG00000020222 ENSKMAG00000020201 exosc9 (ENSKMAG00000020177) clgn (ENSKMAG00000020139) ##21 scoca (ENSKMAG00000020126) ENSKMAG00000020113 ##22 naa15b (ENSKMAG00000020058) RAB33B (ENSKMAG00000020034) ENSKMAG00000020025 elf2b (ENSKMAG00000020008) NOCT (ENSKMAG00000019996) ENSKMAG00000019980 slc43a3a (ENSKMAG00000019956) CTNND1 (ENSKMAG00000019858) timm10 (ENSKMAG00000019827) unc93b1 (ENSKMAG00000019810) ENSKMAG00000019796 rtn4rl2a (ENSKMAG00000019785) ENSKMAG00000019770 cabp2a (ENSKMAG00000019743) Turquoise killifish DUPLICATION Turquoise killifish MODERN SPECIES 1611 myoz2b (ENSNFUG00015007801) SYNPO2 (ENSNFUG00015007809) ENSNFUG00015007818 slc22a7b.1 (ENSNFUG00015007834) ENSNFUG00015007847 DHX15 (ENSNFUG00015007905) SOD3 (ENSNFUG00015008382) HADH (ENSNFUG00015008386) ENSNFUG00015008394 ENSNFUG00015008398 CCDC109B (ENSNFUG00015008408) casp6a (ENSNFUG00015008416) exosc9 (ENSNFUG00015008492) CLGN (ENSNFUG00015008735) ##21 SCOC (ENSNFUG00015009965) ENSNFUG00015009983 ##22 ENSNFUG00015010006 naa15b (ENSNFUG00015010196) RAB33B (ENSNFUG00015012863) ENSNFUG00015012874 ENSNFUG00015012888 gprc5bb (ENSNFUG00015012899) C1H16ORF88 (ENSNFUG00015012910) exosc1 (ENSNFUG00015012920) PGAM1A (ENSNFUG00015012935) pi4k2a (ENSNFUG00015012951) ENSNFUG00015012968 ENSNFUG00015012972 ENSNFUG00015012975 HIST1H2BD (ENSNFUG00015012978) ENSNFUG00015012981 Turquoise killifish MODERN SPECIES 431 ENSNFUG00015010491 ##22 Cyprinodontoidei ANCESTRAL SPECIES 15 ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00990000203866 ENSGT00530000063725.o.r.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000177894 ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000156045.b ENSGT00940000171111.e ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b NAME_4 ANCESTRAL SPECIES 164 ENSGT00530000063725.o.r.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000156045.b ENSGT00940000171111.e ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000164963.c.b ENSGT00940000158505.n.b ENSGT00950000182932.B.a ENSGT01020000230338.a.a ENSGT00940000164685.a Mummichog DUPLICATION Mummichog MODERN SPECIES 2273 ENSFHEG00000013303 ENSFHEG00000013317 ENSFHEG00000013345 clgn (ENSFHEG00000013409) ##21 scoca (ENSFHEG00000013429) ENSFHEG00000013435 ##22 ENSFHEG00000013443 ##22 naa15b (ENSFHEG00000013572) ENSFHEG00000013592 elf2b (ENSFHEG00000000596) NOCT (ENSFHEG00000013623) ENSFHEG00000013641 slc43a3a (ENSFHEG00000013685) CTNND1 (ENSFHEG00000013724) ENSFHEG00000013731 timm10 (ENSFHEG00000013744) unc93b1 (ENSFHEG00000013810) ENSFHEG00000013825 rtn4rl2a (ENSFHEG00000013848) ENSFHEG00000013871 ENSFHEG00000013894 Mummichog MODERN SPECIES 2273 ENSFHEG00000013303 ENSFHEG00000013317 ENSFHEG00000013345 clgn (ENSFHEG00000013409) ##21 scoca (ENSFHEG00000013429) ENSFHEG00000013435 ##22 ENSFHEG00000013443 ##22 naa15b (ENSFHEG00000013572) ENSFHEG00000013592 elf2b (ENSFHEG00000000596) NOCT (ENSFHEG00000013623) ENSFHEG00000013641 slc43a3a (ENSFHEG00000013685) CTNND1 (ENSFHEG00000013724) ENSFHEG00000013731 timm10 (ENSFHEG00000013744) unc93b1 (ENSFHEG00000013810) ENSFHEG00000013825 rtn4rl2a (ENSFHEG00000013848) ENSFHEG00000013871 ENSFHEG00000013894 cabp2a (ENSFHEG00000013913) Sheepshead minnow MODERN SPECIES 527 AXIN2 (ENSCVAG00000001103) ENSCVAG00000001102 slc47a2.1 (ENSCVAG00000001101) ENSCVAG00000001100 ENSCVAG00000001099 exosc9 (ENSCVAG00000001098) clgn (ENSCVAG00000001097) ##21 scoca (ENSCVAG00000001096) ENSCVAG00000001095 ##22 naa15b (ENSCVAG00000000043) RAB33B (ENSCVAG00000000862) elf2b (ENSCVAG00000001094) NOCT (ENSCVAG00000001093) ENSCVAG00000001092 slc43a3a (ENSCVAG00000001091) CTNND1 (ENSCVAG00000001090) Poeciliinae ANCESTRAL SPECIES 9 ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o.r.a ENSGT00530000063725.o.r.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000177894 ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000156045.b ENSGT00940000171111.e ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b Platyfish MODERN SPECIES 19 CBX4 (ENSXMAG00000022788) ENSXMAG00000017909 ccdc40 (ENSXMAG00000017901) TEX2 (ENSXMAG00000017886) ENSXMAG00000017884 ENSXMAG00000017882 ENSXMAG00000022160 AXIN2 (ENSXMAG00000017877) ENSXMAG00000027929 ENSXMAG00000024366 ENSXMAG00000017850 ENSXMAG00000024968 exosc9 (ENSXMAG00000017823) clgn (ENSXMAG00000017814) ##21 scoca (ENSXMAG00000023569) ENSXMAG00000024941 ##22 naa15b (ENSXMAG00000017774) RAB33B (ENSXMAG00000023729) elf2b (ENSXMAG00000017764) NOCT (ENSXMAG00000017762) ENSXMAG00000021130 ENSXMAG00000028290 slc43a3a (ENSXMAG00000017751) CTNND1 (ENSXMAG00000017738) ENSXMAG00000028702 timm10 (ENSXMAG00000017736) unc93b1 (ENSXMAG00000017731) ENSXMAG00000017728 ENSXMAG00000025847 rtn4rl2a (ENSXMAG00000017718) ENSXMAG00000017717 Poecilia ANCESTRAL SPECIES 6 ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o.r.a ENSGT00530000063725.o.r.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000156045.b ENSGT00940000171111.e ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b ENSGT01020000230338.a.a Guppy MODERN SPECIES 439 si:dkey-31g6.6 (ENSPREG00000002660) cbx8b (ENSPREG00000002636) CBX4 (ENSPREG00000002620) ENSPREG00000002457 TEX2 (ENSPREG00000002417) ENSPREG00000002409 ENSPREG00000002391 AXIN2 (ENSPREG00000002332) ENSPREG00000002305 ENSPREG00000002249 ENSPREG00000002220 ENSPREG00000002141 exosc9 (ENSPREG00000002069) clgn (ENSPREG00000002049) ##21 scoca (ENSPREG00000002027) ENSPREG00000002013 ##22 naa15b (ENSPREG00000001936) RAB33B (ENSPREG00000001864) elf2b (ENSPREG00000001656) NOCT (ENSPREG00000001623) ENSPREG00000001604 slc43a3a (ENSPREG00000001585) CTNND1 (ENSPREG00000001363) ENSPREG00000001324 timm10 (ENSPREG00000001315) unc93b1 (ENSPREG00000001297) ENSPREG00000001270 rtn4rl2a (ENSPREG00000001243) ENSPREG00000001230 ENSPREG00000001207 cabp2a (ENSPREG00000001198) NAME_6 ANCESTRAL SPECIES 4 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o.r.a.c ENSGT00530000063725.o.r.a.d ENSGT00530000063725.o.r.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00870000137155 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000156045.b ENSGT00940000171111.e ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b ENSGT01020000230338.a.a Sailfin molly MODERN SPECIES 180 AXIN2 (ENSPLAG00000015754) ENSPLAG00000015787 ENSPLAG00000015796 ENSPLAG00000015943 ENSPLAG00000015957 ENSPLAG00000016018 exosc9 (ENSPLAG00000016052) clgn (ENSPLAG00000016104) ##21 scoca (ENSPLAG00000016112) ENSPLAG00000016114 ##22 naa15b (ENSPLAG00000016167) RAB33B (ENSPLAG00000016172) elf2b (ENSPLAG00000016212) NOCT (ENSPLAG00000016228) ENSPLAG00000016240 slc43a3a (ENSPLAG00000016322) CTNND1 (ENSPLAG00000016356) timm10 (ENSPLAG00000016377) unc93b1 (ENSPLAG00000016394) ENSPLAG00000016408 rtn4rl2a (ENSPLAG00000016419) ENSPLAG00000016428 ENSPLAG00000016435 cabp2a (ENSPLAG00000016457) Amazon molly MODERN SPECIES 263 ENSPFOG00000016389 ccdc40 (ENSPFOG00000016336) TEX2 (ENSPFOG00000016301) ENSPFOG00000020693 ENSPFOG00000016293 ENSPFOG00000022134 AXIN2 (ENSPFOG00000016245) ENSPFOG00000016191 ENSPFOG00000016114 ENSPFOG00000024783 ENSPFOG00000016094 ENSPFOG00000016048 exosc9 (ENSPFOG00000016008) clgn (ENSPFOG00000015933) ##21 scoca (ENSPFOG00000015912) ENSPFOG00000015909 ##22 ENSPFOG00000015878 ENSPFOG00000022787 naa15b (ENSPFOG00000015774) RAB33B (ENSPFOG00000022360) ENSPFOG00000022871 elf2b (ENSPFOG00000015734) NOCT (ENSPFOG00000015717) ENSPFOG00000022885 slc43a3a (ENSPFOG00000015668) CTNND1 (ENSPFOG00000015520) ENSPFOG00000015475 timm10 (ENSPFOG00000015473) unc93b1 (ENSPFOG00000015365) ENSPFOG00000015346 ENSPFOG00000015309 Percomorphaceae_C ANCESTRAL SPECIES 3 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00990000203987 ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000158431.a.a.a.a.a.a.d.b.a.b ENSGT00940000157622.a.a ENSGT01100000263556.a.a.q.d ENSGT01020000230338.a.b.a.e ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B Eupercaria ANCESTRAL SPECIES 2 ENSGT00940000158604 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00990000203987 ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000158431.a.a.a.a.a.a.d.b.a.b ENSGT00940000157622.a.a ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00940000158604 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00990000203987 ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000158431.a.a.a.a.a.a.d.b.a.b ENSGT00940000157622.a.a ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b Ballan wrasse MODERN SPECIES 509 scoca (ENSLBEG00000018233) ENSLBEG00000018217 ##22 naa15b (ENSLBEG00000018110) ENSLBEG00000018063 ENSLBEG00000018047 elf2b (ENSLBEG00000018014) NOCT (ENSLBEG00000017977) ENSLBEG00000017954 ENSLBEG00000017907 slc43a3a (ENSLBEG00000017866) ENSLBEG00000017847 Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000158431.a.a.a.a.a.a.d.b.a.b ENSGT00940000157622.a.a ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b Perciformes ANCESTRAL SPECIES 2 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b ENSGT00950000182932.B.a Perciformes_a ANCESTRAL SPECIES ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b ENSGT00950000182932.B.a Channel bull blenny MODERN SPECIES prf1.2 (ENSCGOG00000005808) AXIN2 (ENSCGOG00000005803) ENSCGOG00000005801 ENSCGOG00000005800 ENSCGOG00000005799 ENSCGOG00000005781 ENSCGOG00000005776 ENSCGOG00000005716 exosc9 (ENSCGOG00000005661) clgn (ENSCGOG00000004825) ##21 scoca (ENSCGOG00000004792) ENSCGOG00000004790 ENSCGOG00000004770 ENSCGOG00000004763 ENSCGOG00000004760 ENSCGOG00000004757 ##22 ENSCGOG00000004756 naa15b (ENSCGOG00000003080) ENSCGOG00000003003 elf2b (ENSCGOG00000002994) NOCT (ENSCGOG00000002987) ENSCGOG00000002977 slc43a3a (ENSCGOG00000002972) slc43a3a (ENSCGOG00000002967) CTNND1 (ENSCGOG00000002909) ENSCGOG00000002898 timm10 (ENSCGOG00000002894) unc93b1 (ENSCGOG00000002646) ENSCGOG00000019871 ENSCGOG00000019856 rtn4rl2a (ENSCGOG00000019853) Pike perch DUPLICATION Pike perch MODERN SPECIES 63 ccdc40 (ENSSLUG00000012246) TEX2 (ENSSLUG00000012218) ENSSLUG00000012205 ENSSLUG00000012182 ENSSLUG00000012167 ENSSLUG00000012157 PRF1 (ENSSLUG00000012152) PRF1 (ENSSLUG00000012142) AXIN2 (ENSSLUG00000012115) ENSSLUG00000012106 ENSSLUG00000011969 ENSSLUG00000011936 exosc9 (ENSSLUG00000011903) clgn (ENSSLUG00000009990) ##21 scoca (ENSSLUG00000009908) ENSSLUG00000009906 ##22 ENSSLUG00000009904 ##22 naa15b (ENSSLUG00000010430) ENSSLUG00000010299 elf2b (ENSSLUG00000010293) NOCT (ENSSLUG00000010282) ENSSLUG00000010277 ENSSLUG00000010272 CTNND1 (ENSSLUG00000008688) ENSSLUG00000008606 timm10 (ENSSLUG00000008601) unc93b1 (ENSSLUG00000008292) ENSSLUG00000008257 ENSSLUG00000008245 rtn4rl2a (ENSSLUG00000008240) ENSSLUG00000008236 Pike perch MODERN SPECIES 63 TEX2 (ENSSLUG00000012218) ENSSLUG00000012205 ENSSLUG00000012182 ENSSLUG00000012167 ENSSLUG00000012157 PRF1 (ENSSLUG00000012152) PRF1 (ENSSLUG00000012142) AXIN2 (ENSSLUG00000012115) ENSSLUG00000012106 ENSSLUG00000011969 ENSSLUG00000011936 exosc9 (ENSSLUG00000011903) clgn (ENSSLUG00000009990) ##21 scoca (ENSSLUG00000009908) ENSSLUG00000009906 ##22 ENSSLUG00000009904 ##22 naa15b (ENSSLUG00000010430) ENSSLUG00000010299 elf2b (ENSSLUG00000010293) NOCT (ENSSLUG00000010282) ENSSLUG00000010277 ENSSLUG00000010272 CTNND1 (ENSSLUG00000008688) ENSSLUG00000008606 timm10 (ENSSLUG00000008601) unc93b1 (ENSSLUG00000008292) ENSSLUG00000008257 ENSSLUG00000008245 rtn4rl2a (ENSSLUG00000008240) ENSSLUG00000008236 ENSSLUG00000008232 Eupecaria_C ANCESTRAL SPECIES 22 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000158431.a.a.a.a.a.a.d.b.a.b ENSGT00940000157622.a.a ENSGT00940000157622.a.b ENSGT01020000230338.a.b.a.e ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 21 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000158431.a.a.a.a.a.a.d.b.a.b ENSGT00940000157622.a.a ENSGT00940000157622.a.b ENSGT01020000230338.a.b.a.e ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b European seabass MODERN SPECIES 20 cbx8b (ENSDLAG00005013326) ENSDLAG00005033704 ENSDLAG00005027725 ENSDLAG00005027931 ENSDLAG00005013486 ENSDLAG00005013479 ENSDLAG00005013503 ENSDLAG00005032789 ENSDLAG00005013522 ENSDLAG00005013535 ENSDLAG00005013772 ENSDLAG00005031205 ENSDLAG00005013822 clgn (ENSDLAG00005013929) ##21 ENSDLAG00005033773 ENSDLAG00005014938 ##22 ENSDLAG00005014969 ENSDLAG00005034523 ENSDLAG00005015909 ENSDLAG00005015912 ENSDLAG00005015919 ENSDLAG00005029906 ENSDLAG00005032969 slc43a3a (ENSDLAG00005015938) slc43a3a (ENSDLAG00005015946) ENSDLAG00005015963 ENSDLAG00005015997 ENSDLAG00005017082 unc93b1 (ENSDLAG00005017104) ENSDLAG00005017347 ENSDLAG00005017356 Large yellow croaker MODERN SPECIES 481 chchd10 (ENSLCRG00005002504) gstt1b (ENSLCRG00005002514) patl1 (ENSLCRG00005002668) ENSLCRG00005002803 ENSLCRG00005002807 ENSLCRG00005002812 ENSLCRG00005002816 ENSLCRG00005002819 ENSLCRG00005002826 ENSLCRG00005002847 ENSLCRG00005003449 ENSLCRG00005003451 exosc9 (ENSLCRG00005003459) clgn (ENSLCRG00005003589) ##21 scoca (ENSLCRG00005004103) ENSLCRG00005004104 ##22 naa15b (ENSLCRG00005004120) ENSLCRG00005006693 ENSLCRG00005006695 elf2b (ENSLCRG00005006698) NOCT (ENSLCRG00005006701) ENSLCRG00005006707 ENSLCRG00005006708 slc43a3a (ENSLCRG00005006711) slc43a3a (ENSLCRG00005006712) ENSLCRG00005006713 ENSLCRG00005006714 ENSLCRG00005006717 CTNND1 (ENSLCRG00005006724) ENSLCRG00005008692 timm10 (ENSLCRG00005008694) Gilthead seabream MODERN SPECIES CARD14 (ENSSAUG00010000319) ccdc40 (ENSSAUG00010000297) TEX2 (ENSSAUG00010000271) ENSSAUG00010000260 ENSSAUG00010000252 ENSSAUG00010000241 ENSSAUG00010000234 AXIN2 (ENSSAUG00010000226) ENSSAUG00010000216 ENSSAUG00010000159 ENSSAUG00010000124 ENSSAUG00010026560 exosc9 (ENSSAUG00010026553) clgn (ENSSAUG00010026519) ##21 scoca (ENSSAUG00010026513) ENSSAUG00010026512 ##22 naa15b (ENSSAUG00010026407) elf2b (ENSSAUG00010026384) NOCT (ENSSAUG00010026383) ENSSAUG00010026381 ENSSAUG00010026380 slc43a3a (ENSSAUG00010026376) slc43a3a (ENSSAUG00010026375) ENSSAUG00010026372 CTNND1 (ENSSAUG00010026198) ENSSAUG00010026189 Tim10 (ENSSAUG00010026188) unc93b1 (ENSSAUG00010026187) ENSSAUG00010026185 ENSSAUG00010026183 rtn4rl2a (ENSSAUG00010026182) Tetraodontidae ANCESTRAL SPECIES 54 ENSGT00390000011880.b ENSGT00940000155386.a ENSGT00940000165433 ENSGT00940000164979.e ENSGT00940000158604 ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00390000000463.a ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.b ENSGT00950000183130.A ENSGT00990000204378 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000156045.b ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000164963.c.b ENSGT00940000158505.n.b ENSGT01020000230338.a.a ENSGT00940000164685.a ENSGT00940000162009.b ENSGT00390000011517.a.a.c.b ENSGT00940000162287.E ENSGT01100000263533.b.b.a.a.a.a.b.a.a Tetraodon MODERN SPECIES 26 SEC14L1 (ENSTNIG00000006557) ENSTNIG00000003286 ENSTNIG00000000482 dgke (ENSTNIG00000004610) cbx8b (ENSTNIG00000004609) CBX4 (ENSTNIG00000004608) CARD14 (ENSTNIG00000004607) TEX2 (ENSTNIG00000004606) AXIN2 (ENSTNIG00000004605) ENSTNIG00000004604 ENSTNIG00000004603 ENSTNIG00000004602 ENSTNIG00000000121 exosc9 (ENSTNIG00000004601) clgn (ENSTNIG00000004600) ##21 ENSTNIG00000003033 ##22 NAA15 (ENSTNIG00000012342) ENSTNIG00000012343 ENSTNIG00000012344 elf2b (ENSTNIG00000012345) NOCT (ENSTNIG00000012346) slc43a3a (ENSTNIG00000012347) CTNND1 (ENSTNIG00000012348) timm10 (ENSTNIG00000000553) unc93b1 (ENSTNIG00000012349) ENSTNIG00000012350 rtn4rl2a (ENSTNIG00000012351) ENSTNIG00000012352 cabp2a (ENSTNIG00000012353) PTGDR2 (ENSTNIG00000012354) ENSTNIG00000012355 Fugu DUPLICATION Fugu MODERN SPECIES 8 dgke (ENSTRUG00000002270) ENSTRUG00000032147 CBX4 (ENSTRUG00000001874) CARD14 (ENSTRUG00000003023) TEX2 (ENSTRUG00000032313) ENSTRUG00000004126 ENSTRUG00000031733 ENSTRUG00000028364 AXIN2 (ENSTRUG00000005813) ENSTRUG00000032628 ENSTRUG00000004721 exosc9 (ENSTRUG00000004119) ENSTRUG00000003449 scoca (ENSTRUG00000029569) ENSTRUG00000003286 ##22 ENSTRUG00000021971 ##22 naa15b (ENSTRUG00000015036) ENSTRUG00000027001 ENSTRUG00000032488 elf2b (ENSTRUG00000014983) NOCT (ENSTRUG00000014977) ENSTRUG00000014916 CTNND1 (ENSTRUG00000014794) ENSTRUG00000033313 ENSTRUG00000032085 timm10 (ENSTRUG00000014789) unc93b1 (ENSTRUG00000014741) ENSTRUG00000014719 rtn4rl2a (ENSTRUG00000030646) ENSTRUG00000024277 cabp2a (ENSTRUG00000014658) Fugu MODERN SPECIES 8 trim25 (ENSTRUG00000002882) dgke (ENSTRUG00000002270) ENSTRUG00000032147 CBX4 (ENSTRUG00000001874) CARD14 (ENSTRUG00000003023) TEX2 (ENSTRUG00000032313) ENSTRUG00000004126 ENSTRUG00000031733 ENSTRUG00000028364 AXIN2 (ENSTRUG00000005813) ENSTRUG00000032628 ENSTRUG00000004721 exosc9 (ENSTRUG00000004119) ENSTRUG00000003449 scoca (ENSTRUG00000029569) ENSTRUG00000003286 ##22 ENSTRUG00000021971 ##22 naa15b (ENSTRUG00000015036) ENSTRUG00000027001 ENSTRUG00000032488 elf2b (ENSTRUG00000014983) NOCT (ENSTRUG00000014977) ENSTRUG00000014916 CTNND1 (ENSTRUG00000014794) ENSTRUG00000033313 ENSTRUG00000032085 timm10 (ENSTRUG00000014789) unc93b1 (ENSTRUG00000014741) ENSTRUG00000014719 rtn4rl2a (ENSTRUG00000030646) ENSTRUG00000024277 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000158431.a.a.a.a.a.a.d.b.a.b ENSGT00940000157622.a.a ENSGT01100000263556.a.a.q.d ENSGT01020000230338.a.b.a.e ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d Anabantaria ANCESTRAL SPECIES 1 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000158431.a.a.a.a.a.a.d.b.a.b ENSGT00940000177894 ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b Anabantoidei ANCESTRAL SPECIES ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000158431.a.a.a.a.a.a.d.b.a.b ENSGT00940000157622.a.a ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b ENSGT01020000230338.a.a Climbing perch MODERN SPECIES ccdc40 (ENSATEG00000023409) ENSATEG00000023394 ENSATEG00000023385 ENSATEG00000025779 ENSATEG00000029006 ENSATEG00000023259 ENSATEG00000023341 ENSATEG00000023147 ENSATEG00000028282 ENSATEG00000023123 ENSATEG00000023081 ENSATEG00000023052 ENSATEG00000023032 clgn (ENSATEG00000023020) ##21 ENSATEG00000023017 ENSATEG00000023015 ##22 ENSATEG00000023002 ENSATEG00000022993 ENSATEG00000022983 ENSATEG00000022975 ENSATEG00000022977 ENSATEG00000022972 slc43a3a (ENSATEG00000022954) slc43a3a (ENSATEG00000022938) ENSATEG00000022886 timm10 (ENSATEG00000022871) unc93b1 (ENSATEG00000022857) ENSATEG00000022853 ENSATEG00000012075 rtn4rl2a (ENSATEG00000030005) ENSATEG00000022793 Siamese fighting fish MODERN SPECIES ENSBSLG00000015757 abca1a (ENSBSLG00000015778) SGCZ (ENSBSLG00000015880) tusc3 (ENSBSLG00000015889) exosc9 (ENSBSLG00000015906) ENSBSLG00000015919 tppp2 (ENSBSLG00000015921) ENSBSLG00000015925 hand2 (ENSBSLG00000015931) fbxo8 (ENSBSLG00000015936) ENSBSLG00000015947 ENSBSLG00000015995 ENSBSLG00000016004 clgn (ENSBSLG00000016013) ##21 scoca (ENSBSLG00000016277) ENSBSLG00000016589 ##22 naa15b (ENSBSLG00000016893) ENSBSLG00000018100 elf2b (ENSBSLG00000018120) NOCT (ENSBSLG00000018185) slc43a3a (ENSBSLG00000018273) slc43a3a (ENSBSLG00000018314) CTNND1 (ENSBSLG00000018364) timm10 (ENSBSLG00000018685) unc93b1 (ENSBSLG00000018692) ENSBSLG00000018873 ENSBSLG00000018890 rtn4rl2a (ENSBSLG00000018920) ENSBSLG00000018938 cabp2a (ENSBSLG00000018954) PTGDR2 (ENSBSLG00000018980) Zig-zag eel MODERN SPECIES cbx8b (ENSMAMG00000024709) ENSMAMG00000006067 ENSMAMG00000006075 ccdc40 (ENSMAMG00000006097) ENSMAMG00000006113 ENSMAMG00000006162 ENSMAMG00000026407 ENSMAMG00000006170 ENSMAMG00000006234 ENSMAMG00000006274 ENSMAMG00000006369 ENSMAMG00000006444 ENSMAMG00000006465 clgn (ENSMAMG00000006473) ##21 ENSMAMG00000026130 ENSMAMG00000006510 ##22 ENSMAMG00000006525 ENSMAMG00000027120 ENSMAMG00000006660 ENSMAMG00000006732 ENSMAMG00000006755 ENSMAMG00000006770 slc43a3a (ENSMAMG00000006783) ENSMAMG00000006799 timm10 (ENSMAMG00000006879) unc93b1 (ENSMAMG00000006883) ENSMAMG00000006889 rtn4rl2a (ENSMAMG00000026888) ENSMAMG00000006942 ENSMAMG00000006955 ENSMAMG00000007011 Carangaria ANCESTRAL SPECIES ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00530000063725.o ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000157622.a.a ENSGT00940000157622.a.b ENSGT01100000263556.a.a.q.d ENSGT01020000230338.a.b.a.e ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b Carangaria_A ANCESTRAL SPECIES 24 ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000157622.a.a ENSGT01100000263556.a.a.q.d ENSGT01020000230338.a.b.a.e ENSGT00940000157622.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000165124.d ENSGT00940000164963.c.b ENSGT00940000158505.n.b Seriola ANCESTRAL SPECIES 11 ENSGT00940000164407.a.a ENSGT00390000015863 ENSGT00940000160151 ENSGT00940000156865.a ENSGT00390000006009.b ENSGT00390000003817 ENSGT00940000161361 ENSGT00940000161195.a.b ENSGT00940000154277.b.a ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00990000204378 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00950000183035.b.f ENSGT00940000157338.a ENSGT00530000063725.o.x.a.b ENSGT00530000063725.o.x.a.a ENSGT00530000063725.o.x.b ENSGT00950000182933.B.b ENSGT00390000000463.a ENSGT00440000035688 ENSGT00940000160777 ENSGT00940000160081.c.a ENSGT00940000158476.a ENSGT00390000006555 ENSGT00940000158604 ENSGT00940000164979.f.b Greater amberjack MODERN SPECIES 20 grk4 (ENSSDUG00000001998) ENSSDUG00000002042 TOM1 (ENSSDUG00000002052) ENSSDUG00000002077 get3 (ENSSDUG00000002155) BEST2 (ENSSDUG00000002175) JUNB (ENSSDUG00000002207) prdx2 (ENSSDUG00000002224) ENSSDUG00000002244 ENSSDUG00000002258 ENSSDUG00000002277 ENSSDUG00000002289 exosc9 (ENSSDUG00000002313) ENSSDUG00000002378 scoca (ENSSDUG00000002404) ENSSDUG00000002425 ##22 naa15b (ENSSDUG00000002446) ENSSDUG00000002520 AXIN2 (ENSSDUG00000002553) ENSSDUG00000002640 ENSSDUG00000002802 ENSSDUG00000003053 ENSSDUG00000003077 TEX2 (ENSSDUG00000003089) ccdc40 (ENSSDUG00000003129) ENSSDUG00000003172 CBX4 (ENSSDUG00000003337) cbx8b (ENSSDUG00000003344) si:dkey-31g6.6 (ENSSDUG00000003351) dgke (ENSSDUG00000003368) ENSSDUG00000003413 Yellowtail amberjack MODERN SPECIES 2529 ENSSLDG00000020966 get3 (ENSSLDG00000020950) BEST2 (ENSSLDG00000020934) JUNB (ENSSLDG00000020923) prdx2 (ENSSLDG00000020901) ENSSLDG00000020778 ENSSLDG00000020648 ENSSLDG00000020626 ENSSLDG00000020612 exosc9 (ENSSLDG00000020591) ENSSLDG00000020527 scoca (ENSSLDG00000020501) ENSSLDG00000020486 ##22 naa15b (ENSSLDG00000020447) Barramundi perch MODERN SPECIES 355 ENSLCAG00010011057 ENSLCAG00010011072 ENSLCAG00010011073 exosc9 (ENSLCAG00010011076) clgn (ENSLCAG00010011085) ##21 scoca (ENSLCAG00010011097) ENSLCAG00010011102 ##22 naa15b (ENSLCAG00010011132) ENSLCAG00010011240 elf2b (ENSLCAG00010011243) NOCT (ENSLCAG00010011249) ENSLCAG00010011251 slc43a3a (ENSLCAG00010011254) ENSLCAG00010011259 CTNND1 (ENSLCAG00010011365) ENSLCAG00010011883 timm10 (ENSLCAG00010011889) unc93b1 (ENSLCAG00010011900) ENSLCAG00010011926 ENSLCAG00010011931 rtn4rl2a (ENSLCAG00010011941) ENSLCAG00010011946 Pleuronectoidei ANCESTRAL SPECIES 22 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 ENSGT00440000035688 ENSGT00390000000463.a ENSGT00950000182933.B.b ENSGT00940000157338.a ENSGT00950000183035.b.f ENSGT00940000163234.a.b.h.a.a.b ENSGT00940000163234.a.b.h.a.b ENSGT00940000163454.a.a.a.a ENSGT00940000163454.a.a.b ENSGT00950000183130.A ENSGT00950000182915.a.a.b ##21 ENSGT00390000008828.fb.b ENSGT00950000183201.b.a.b ##22 ENSGT00950000183174.B.a.e ENSGT00940000157090.h ENSGT00940000154953.b ENSGT00940000155249.g ENSGT00940000167646 ENSGT00940000158431.a.a.a.a.a.a.d.b.a.b ENSGT00940000156045.b ENSGT00940000171111 ENSGT00390000003068 ENSGT00530000063359.B ENSGT00940000164963.c.b ENSGT00940000158505.n.b ENSGT00950000182932.B.a ENSGT01020000230338.a.a ENSGT00940000164685.a Turbot MODERN SPECIES 20 dgke (ENSSMAG00000011588) si:dkey-31g6.6 (ENSSMAG00000034251) cbx8b (ENSSMAG00000011628) ENSSMAG00000011638 ENSSMAG00000011645 ENSSMAG00000011741 ENSSMAG00000011757 ENSSMAG00000011766 ENSSMAG00000011817 ENSSMAG00000011864 ENSSMAG00000011996 ENSSMAG00000012019 clgn (ENSSMAG00000012101) ##21 ENSSMAG00000012071 scoca (ENSSMAG00000025829) ENSSMAG00000012133 ##22 ENSSMAG00000012140 ENSSMAG00000037831 ENSSMAG00000012181 ENSSMAG00000012233 ENSSMAG00000012252 ENSSMAG00000012277 ENSSMAG00000034788 ENSSMAG00000012484 ENSSMAG00000012492 wdr17 (ENSSMAG00000012503) ENSSMAG00000034692 ENSSMAG00000012602 ENSSMAG00000032933 ENSSMAG00000012638 ENSSMAG00000037754 Tongue sole MODERN SPECIES 19 cbx8b (ENSCSEG00000014926) CBX4 (ENSCSEG00000014919) ENSCSEG00000014828 ccdc40 (ENSCSEG00000014792) TEX2 (ENSCSEG00000014780) ENSCSEG00000014774 AXIN2 (ENSCSEG00000014744) ENSCSEG00000014713 ENSCSEG00000014708 ENSCSEG00000014681 ENSCSEG00000014669 ENSCSEG00000014657 scoca (ENSCSEG00000014649) clgn (ENSCSEG00000014614) ##21 exosc9 (ENSCSEG00000014567) ENSCSEG00000014560 ##22 naa15b (ENSCSEG00000014510) RAB33B (ENSCSEG00000014479) elf2b (ENSCSEG00000014461) NOCT (ENSCSEG00000014449) ENSCSEG00000014445 TNS4 (ENSCSEG00000014434) ccr7 (ENSCSEG00000014429) SMARCE1 (ENSCSEG00000014417) IGFBP4 (ENSCSEG00000014412) ENSCSEG00000014400 ENSCSEG00000014374 nfil3-5 (ENSCSEG00000014363) ENSCSEG00000014349 odad3 (ENSCSEG00000014343) SLC44A2 (ENSCSEG00000014299) Gnathostomata ANCESTRAL SPECIES ENSGT00950000183201.a ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183201.a ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183201.a ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00940000161277 ENSGT00940000156340.b ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00940000175059 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.D ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153259.a.a.a ENSGT00940000153972.A ENSGT01100000263551.b.a.b Amniota ANCESTRAL SPECIES ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000156340.b ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153259.a.a.a Sauria ANCESTRAL SPECIES 2 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000156340.b ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A Lepidosauria ANCESTRAL SPECIES 17 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000154907.a.a ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00940000175059 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A Episquamata ANCESTRAL SPECIES 2 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000154907.a.a.jc ENSGT00940000154907.a.a.ic ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A Laterata ANCESTRAL SPECIES 3 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000154907.a.a.jc ENSGT00940000154907.a.a.ic ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A ENSGT00940000157994.c Common wall lizard MODERN SPECIES 12 ENSPMRG00000009452 ENSPMRG00000009446 YAP1 (ENSPMRG00000009439) CFAP300 (ENSPMRG00000009428) ENSPMRG00000009421 ANGPTL5 (ENSPMRG00000009416) TRPC6 (ENSPMRG00000009410) PGR (ENSPMRG00000009404) ARHGAP42 (ENSPMRG00000009371) ENSPMRG00000009363 ENSPMRG00000009362 CNTN5 (ENSPMRG00000008844) ENSPMRG00000008746 CCDC82 (ENSPMRG00000008743) ENSPMRG00000008736 MAML2 (ENSPMRG00000008730) ##22 MTMR2 (ENSPMRG00000008721) CEP57 (ENSPMRG00000008718) FAM76B (ENSPMRG00000008712) ENSPMRG00000008711 SESN3 (ENSPMRG00000008702) ENDOD1 (ENSPMRG00000008697) CWC15 (ENSPMRG00000008694) AMOTL1 (ENSPMRG00000008682) ENSPMRG00000008502 FUT4 (ENSPMRG00000008469) ANKRD49 (ENSPMRG00000008465) MRE11 (ENSPMRG00000008460) GPR83 (ENSPMRG00000008457) ENSPMRG00000008454 ENSPMRG00000008452 Argentine black and white tegu MODERN SPECIES 24 ZC3H12C (ENSSMRG00000010798) RDX (ENSSMRG00000010790) FDX1 (ENSSMRG00000010785) ENSSMRG00000010777 ENSSMRG00000010775 ENSSMRG00000010773 YAP1 (ENSSMRG00000010770) ENSSMRG00000010748 ENSSMRG00000010744 ANGPTL5 (ENSSMRG00000010741) TRPC6 (ENSSMRG00000010734) PGR (ENSSMRG00000010697) ARHGAP42 (ENSSMRG00000010680) CNTN5 (ENSSMRG00000010264) CCDC82 (ENSSMRG00000010232) MAML2 (ENSSMRG00000010230) ##22 MTMR2 (ENSSMRG00000010222) CEP57 (ENSSMRG00000010212) FAM76B (ENSSMRG00000010211) SESN3 (ENSSMRG00000010206) ENDOD1 (ENSSMRG00000010205) CWC15 (ENSSMRG00000010192) AMOTL1 (ENSSMRG00000010190) PIWIL4 (ENSSMRG00000009898) FUT4 (ENSSMRG00000009896) C11orf97 (ENSSMRG00000009893) ANKRD49 (ENSSMRG00000009883) MRE11 (ENSSMRG00000009882) GPR83 (ENSSMRG00000009866) PANX1 (ENSSMRG00000009865) ENSSMRG00000009859 Toxicofera ANCESTRAL SPECIES 9 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000154907.a.a.jc ENSGT00940000154907.a.a.ic ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000153972.A ENSGT00940000157994.c Lizard MODERN SPECIES 2 ENSACAG00000035329 ANGPTL5 (ENSACAG00000012817) ENSACAG00000038711 TRPC6 (ENSACAG00000012822) ENSACAG00000044869 PGR (ENSACAG00000013594) ARHGAP42 (ENSACAG00000013753) ENSACAG00000022852 ENSACAG00000038716 ENSACAG00000041932 CNTN5 (ENSACAG00000013104) ENSACAG00000041554 ENSACAG00000007897 ENSACAG00000037709 CCDC82 (ENSACAG00000013514) MAML2 (ENSACAG00000013555) ##22 CEP57 (ENSACAG00000013700) FAM76B (ENSACAG00000028830) SESN3 (ENSACAG00000013850) ENDOD1 (ENSACAG00000013977) ENSACAG00000037254 CWC15 (ENSACAG00000013987) AMOTL1 (ENSACAG00000014015) ENSACAG00000035085 PIWIL4 (ENSACAG00000014070) ENSACAG00000041426 FUT4 (ENSACAG00000014099) C11orf97 (ENSACAG00000028473) ANKRD49 (ENSACAG00000014101) MRE11 (ENSACAG00000014110) ENSACAG00000014226 Elapidae ANCESTRAL SPECIES 10 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000154907.a.a.jc ENSGT00940000154907.a.a.ic ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000153972.A ENSGT00390000015701 Indian cobra MODERN SPECIES 4 MMP27 (ENSNNAG00000011591) MMP20 (ENSNNAG00000011646) ENSNNAG00000011741 TMEM123 (ENSNNAG00000011768) ENSNNAG00000011785 YAP1 (ENSNNAG00000011815) CFAP300 (ENSNNAG00000011854) ENSNNAG00000011955 ANGPTL5 (ENSNNAG00000011981) TRPC6 (ENSNNAG00000012027) PGR (ENSNNAG00000012172) ARHGAP42 (ENSNNAG00000012473) CNTN5 (ENSNNAG00000012599) ENSNNAG00000012902 CCDC82 (ENSNNAG00000012921) MAML2 (ENSNNAG00000003081) ##22 ENSNNAG00000003093 MTMR2 (ENSNNAG00000003100) CEP57 (ENSNNAG00000003119) FAM76B (ENSNNAG00000003133) ENSNNAG00000003155 ENDOD1 (ENSNNAG00000003169) CWC15 (ENSNNAG00000003179) AMOTL1 (ENSNNAG00000003274) PIWIL4 (ENSNNAG00000003845) FUT4 (ENSNNAG00000003996) C11orf97 (ENSNNAG00000004006) ANKRD49 (ENSNNAG00000004023) ENSNNAG00000004034 ENSNNAG00000004046 ENSNNAG00000004076 Elapidae_a ANCESTRAL SPECIES 41 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000154907.a.a.jc ENSGT00940000154907.a.a.ic ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000153972.A ENSGT00390000015701 ENSGT00940000166029 Acanthophiinae ANCESTRAL SPECIES 42 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000154907.a.a.jc ENSGT00940000154907.a.a.ic ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000153972.A ENSGT00390000015701 ENSGT00940000166029 Mainland tiger snake MODERN SPECIES 75 MMP20 (ENSNSUG00000006145) ENSNSUG00000006143 ENSNSUG00000006090 TMEM123 (ENSNSUG00000006089) ENSNSUG00000006049 YAP1 (ENSNSUG00000006048) CFAP300 (ENSNSUG00000006047) ENSNSUG00000006044 ENSNSUG00000006043 ANGPTL5 (ENSNSUG00000006042) TRPC6 (ENSNSUG00000006041) PGR (ENSNSUG00000006026) ARHGAP42 (ENSNSUG00000006025) CNTN5 (ENSNSUG00000006024) CCDC82 (ENSNSUG00000006023) MAML2 (ENSNSUG00000006022) ##22 MTMR2 (ENSNSUG00000006021) CEP57 (ENSNSUG00000006020) FAM76B (ENSNSUG00000006019) SESN3 (ENSNSUG00000005777) ENSNSUG00000005775 CWC15 (ENSNSUG00000005774) AMOTL1 (ENSNSUG00000005735) PIWIL4 (ENSNSUG00000005734) Eastern brown snake MODERN SPECIES 33 MMP20 (ENSPTXG00000004974) ENSPTXG00000004971 ENSPTXG00000004969 TMEM123 (ENSPTXG00000004967) ENSPTXG00000004966 YAP1 (ENSPTXG00000004962) CFAP300 (ENSPTXG00000004955) ENSPTXG00000004953 ANGPTL5 (ENSPTXG00000004951) TRPC6 (ENSPTXG00000004918) PGR (ENSPTXG00000004915) ARHGAP42 (ENSPTXG00000004913) CNTN5 (ENSPTXG00000004808) ENSPTXG00000004802 CCDC82 (ENSPTXG00000004800) MAML2 (ENSPTXG00000004798) ##22 MTMR2 (ENSPTXG00000004795) CEP57 (ENSPTXG00000004793) FAM76B (ENSPTXG00000004789) SESN3 (ENSPTXG00000004788) ENDOD1 (ENSPTXG00000004786) CWC15 (ENSPTXG00000004785) AMOTL1 (ENSPTXG00000004778) PIWIL4 (ENSPTXG00000004775) FUT4 (ENSPTXG00000004772) C11orf97 (ENSPTXG00000004770) ANKRD49 (ENSPTXG00000004769) MRE11 (ENSPTXG00000004736) ENSPTXG00000004732 ENSPTXG00000004730 HEPHL1 (ENSPTXG00000004241) Blue-lipped sea krait DUPLICATION Blue-lipped sea krait MODERN SPECIES 9575 ENSLLTG00000013241 ##22 Blue-lipped sea krait MODERN SPECIES 3026 ENSLLTG00000018076 ##22 tuatara DUPLICATION tuatara MODERN SPECIES 1905 ENSSPUG00000018764 ENSSPUG00000018761 ##22 ENSSPUG00000018754 ##22 tuatara MODERN SPECIES 1905 ENSSPUG00000018764 ENSSPUG00000018761 ##22 ENSSPUG00000018754 ##22 Archelosauria ANCESTRAL SPECIES ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000156340.b ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A Archosauria ANCESTRAL SPECIES 2 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000156340.b ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A ENSGT00940000157994 Aves ANCESTRAL SPECIES ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000154907.a.a ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A ENSGT00940000157994 ENSGT01030000234590.A.a.b Neognathae ANCESTRAL SPECIES 1 ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000154907.a.a ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A ENSGT00940000157994 ENSGT01030000234590.A.a.b Neognathae_b ANCESTRAL SPECIES ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000154907.a.a ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A ENSGT00940000157994 ENSGT01030000234590.A.a.b Passeriformes ANCESTRAL SPECIES 1 ENSGT00940000166491 ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000154907.a.a ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A ENSGT00940000157994 ENSGT01030000234590.A.a.b Great tit MODERN SPECIES ENSPMJG00000017838 MMP1 (ENSPMJG00000017839) MMP27 (ENSPMJG00000017840) ENSPMJG00000017841 TMEM123 (ENSPMJG00000017842) ENSPMJG00000017843 YAP1 (ENSPMJG00000017845) CFAP300 (ENSPMJG00000017846) ENSPMJG00000017848 ANGPTL5 (ENSPMJG00000017849) TRPC6 (ENSPMJG00000017850) PGR (ENSPMJG00000017851) ARHGAP42 (ENSPMJG00000017852) CNTN5 (ENSPMJG00000017853) CCDC82 (ENSPMJG00000017854) MAML2 (ENSPMJG00000017855) ##22 MTMR2 (ENSPMJG00000017856) CEP57 (ENSPMJG00000017857) FAM76B (ENSPMJG00000017858) SESN3 (ENSPMJG00000017859) ENDOD1 (ENSPMJG00000017860) CWC15 (ENSPMJG00000017862) AMOTL1 (ENSPMJG00000017863) FUT4 (ENSPMJG00000017864) ENSPMJG00000017865 ANKRD49 (ENSPMJG00000017866) MRE11 (ENSPMJG00000017867) GPR83 (ENSPMJG00000017868) PANX1 (ENSPMJG00000017869) ENSPMJG00000017870 ENSPMJG00000017871 Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00940000166491 ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000154907.a.a ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A ENSGT00940000157994 ENSGT01030000234590.A.a.b Flycatcher MODERN SPECIES ENSFALG00000000394 MMP1 (ENSFALG00000000382) MMP27 (ENSFALG00000000375) ENSFALG00000000372 ENSFALG00000000371 ENSFALG00000000370 YAP1 (ENSFALG00000000364) CFAP300 (ENSFALG00000000361) ENSFALG00000000358 ANGPTL5 (ENSFALG00000000357) TRPC6 (ENSFALG00000000356) PGR (ENSFALG00000000354) ARHGAP42 (ENSFALG00000000353) CNTN5 (ENSFALG00000000348) CCDC82 (ENSFALG00000024899) MAML2 (ENSFALG00000000339) ##22 MTMR2 (ENSFALG00000000338) CEP57 (ENSFALG00000000337) FAM76B (ENSFALG00000000336) SESN3 (ENSFALG00000000333) ENDOD1 (ENSFALG00000000330) CWC15 (ENSFALG00000027709) AMOTL1 (ENSFALG00000000320) FUT4 (ENSFALG00000014231) ENSFALG00000020356 ANKRD49 (ENSFALG00000027188) MRE11 (ENSFALG00000000315) GPR83 (ENSFALG00000000313) PANX1 (ENSFALG00000000311) HEPHL1 (ENSFALG00000000307) ENSFALG00000025897 Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00940000166491 ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000154907.a.a ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A ENSGT00940000157994 ENSGT01030000234590.A.a.b Passeroidea ANCESTRAL SPECIES 5 ENSGT00940000166491 ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000154907.a.a ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A ENSGT00940000157994 ENSGT01030000234590.A.a.b Common canary MODERN SPECIES 4 MMP1 (ENSSCAG00000004003) MMP27 (ENSSCAG00000003998) ENSSCAG00000003992 TMEM123 (ENSSCAG00000003984) ENSSCAG00000003981 YAP1 (ENSSCAG00000003972) CFAP300 (ENSSCAG00000003962) ENSSCAG00000003957 ANGPTL5 (ENSSCAG00000003952) TRPC6 (ENSSCAG00000003932) PGR (ENSSCAG00000003909) ARHGAP42 (ENSSCAG00000003892) ENSSCAG00000003880 CNTN5 (ENSSCAG00000003870) CCDC82 (ENSSCAG00000003858) ENSSCAG00000003855 ##22 MTMR2 (ENSSCAG00000003835) CEP57 (ENSSCAG00000003826) FAM76B (ENSSCAG00000003820) SESN3 (ENSSCAG00000003813) ENDOD1 (ENSSCAG00000003802) CWC15 (ENSSCAG00000003798) AMOTL1 (ENSSCAG00000003677) FUT4 (ENSSCAG00000003662) ENSSCAG00000003659 ANKRD49 (ENSSCAG00000003657) MRE11 (ENSSCAG00000003648) GPR83 (ENSSCAG00000003647) PANX1 (ENSSCAG00000003636) HEPHL1 (ENSSCAG00000003621) ENSSCAG00000003613 Zebra finch MODERN SPECIES MMP1 (ENSTGUG00000012737) MMP27 (ENSTGUG00000023611) ENSTGUG00000018460 TMEM123 (ENSTGUG00000027337) ENSTGUG00000012745 YAP1 (ENSTGUG00000012754) CFAP300 (ENSTGUG00000012760) ENSTGUG00000012764 ANGPTL5 (ENSTGUG00000024680) ENSTGUG00000022925 TRPC6 (ENSTGUG00000012766) PGR (ENSTGUG00000012778) ARHGAP42 (ENSTGUG00000012788) CNTN5 (ENSTGUG00000012792) CCDC82 (ENSTGUG00000012800) MAML2 (ENSTGUG00000012803) ##22 MTMR2 (ENSTGUG00000012806) CEP57 (ENSTGUG00000024409) FAM76B (ENSTGUG00000012811) SESN3 (ENSTGUG00000024822) ENDOD1 (ENSTGUG00000026431) CWC15 (ENSTGUG00000029544) AMOTL1 (ENSTGUG00000012818) FUT4 (ENSTGUG00000027501) C11orf97 (ENSTGUG00000022175) ANKRD49 (ENSTGUG00000012823) MRE11 (ENSTGUG00000012824) GPR83 (ENSTGUG00000026792) PANX1 (ENSTGUG00000012828) ENSTGUG00000012838 ENSTGUG00000012842 Medium ground finch MODERN SPECIES 5 ENSGFOG00000002382 MMP1 (ENSGFOG00000002501) MMP27 (ENSGFOG00000002634) ENSGFOG00000002758 TMEM123 (ENSGFOG00000002771) ENSGFOG00000002791 YAP1 (ENSGFOG00000002832) CFAP300 (ENSGFOG00000002923) ENSGFOG00000002958 ANGPTL5 (ENSGFOG00000003011) TRPC6 (ENSGFOG00000003038) ARHGAP42 (ENSGFOG00000003106) CNTN5 (ENSGFOG00000003137) ENSGFOG00000003199 CCDC82 (ENSGFOG00000003213) MAML2 (ENSGFOG00000003232) ##22 MTMR2 (ENSGFOG00000003280) CEP57 (ENSGFOG00000003350) FAM76B (ENSGFOG00000003753) SESN3 (ENSGFOG00000003762) ENDOD1 (ENSGFOG00000003780) CWC15 (ENSGFOG00000003791) AMOTL1 (ENSGFOG00000003833) ENSGFOG00000004274 C11orf97 (ENSGFOG00000004289) ANKRD49 (ENSGFOG00000004301) MRE11 (ENSGFOG00000004308) GPR83 (ENSGFOG00000004321) PANX1 (ENSGFOG00000004334) ENSGFOG00000004352 ENSGFOG00000004362 Neognathae_c ANCESTRAL SPECIES 11 ENSGT00940000166491 ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A ENSGT00940000157994 ENSGT01030000234590.A.a.b Kakapo MODERN SPECIES 11 ENSSHBG00005002636 MMP1 (ENSSHBG00005002695) MMP27 (ENSSHBG00005002736) MMP7 (ENSSHBG00005002758) TMEM123 (ENSSHBG00005002791) ENSSHBG00005002816 YAP1 (ENSSHBG00005002837) ENSSHBG00005002847 ENSSHBG00005002857 ANGPTL5 (ENSSHBG00005002883) TRPC6 (ENSSHBG00005002929) PGR (ENSSHBG00005002963) ARHGAP42 (ENSSHBG00005003000) CNTN5 (ENSSHBG00005003033) CCDC82 (ENSSHBG00005003090) MAML2 (ENSSHBG00005003105) ##22 MTMR2 (ENSSHBG00005003123) CEP57 (ENSSHBG00005003137) FAM76B (ENSSHBG00005003148) SESN3 (ENSSHBG00005003167) ENDOD1 (ENSSHBG00005003178) CWC15 (ENSSHBG00005003187) ENSSHBG00005003237 FUT4 (ENSSHBG00005003309) C11orf97 (ENSSHBG00005003322) ANKRD49 (ENSSHBG00005003336) MRE11 (ENSSHBG00005003350) GPR83 (ENSSHBG00005003385) PANX1 (ENSSHBG00005003411) HEPHL1 (ENSSHBG00005003506) ENSSHBG00005003748 Golden eagle MODERN SPECIES 10 ENSACCG00020008528 MMP1 (ENSACCG00020008549) MMP27 (ENSACCG00020008570) ENSACCG00020008585 TMEM123 (ENSACCG00020008603) ENSACCG00020008627 YAP1 (ENSACCG00020008686) CFAP300 (ENSACCG00020008702) CEP126 (ENSACCG00020008718) ANGPTL5 (ENSACCG00020008738) TRPC6 (ENSACCG00020008765) PGR (ENSACCG00020008798) ARHGAP42 (ENSACCG00020008871) CNTN5 (ENSACCG00020008929) CCDC82 (ENSACCG00020008966) MAML2 (ENSACCG00020008985) ##22 MTMR2 (ENSACCG00020009006) CEP57 (ENSACCG00020009041) FAM76B (ENSACCG00020009069) SESN3 (ENSACCG00020009081) ENDOD1 (ENSACCG00020009097) CWC15 (ENSACCG00020009107) AMOTL1 (ENSACCG00020009124) FUT4 (ENSACCG00020009150) C11orf97 (ENSACCG00020009174) ANKRD49 (ENSACCG00020009196) MRE11 (ENSACCG00020009228) GPR83 (ENSACCG00020009257) PANX1 (ENSACCG00020009270) HEPHL1 (ENSACCG00020009476) ENSACCG00020009612 Galloanserae ANCESTRAL SPECIES 1 ENSGT00940000166491 ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000153972.A ENSGT00940000157994 ENSGT01030000234590.A.a.b ENSGT00940000166029.d Anatidae ANCESTRAL SPECIES 16 ENSGT00940000166491 ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000153972.A ENSGT00940000157994 ENSGT01030000234590.A.a.b ENSGT00940000166029.d Pink-footed goose MODERN SPECIES 69 CCDC82 (ENSABRG00000000801) MAML2 (ENSABRG00000000748) ##22 MTMR2 (ENSABRG00000022819) CEP57 (ENSABRG00000022815) FAM76B (ENSABRG00000022812) SESN3 (ENSABRG00000022806) ENDOD1 (ENSABRG00000022805) CWC15 (ENSABRG00000022800) AMOTL1 (ENSABRG00000022773) FUT4 (ENSABRG00000022765) C11orf97 (ENSABRG00000022763) ANKRD49 (ENSABRG00000022759) MRE11 (ENSABRG00000022756) GPR83 (ENSABRG00000022752) PANX1 (ENSABRG00000022749) ENSABRG00000022746 ENSABRG00000022745 Duck MODERN SPECIES ENSAPLG00000031031 ENSAPLG00000026339 GPC5 (ENSAPLG00000007039) ENSAPLG00000017935 ENSAPLG00000011925 SLITRK5 (ENSAPLG00000006873) ENSAPLG00000024179 SLITRK6 (ENSAPLG00000011486) ENSAPLG00000027660 ENSAPLG00000003316 ARHGAP42 (ENSAPLG00000016036) CNTN5 (ENSAPLG00000013194) ENSAPLG00000026412 ENSAPLG00000023904 CCDC82 (ENSAPLG00000004583) MAML2 (ENSAPLG00000004519) ##22 MTMR2 (ENSAPLG00000004052) CEP57 (ENSAPLG00000003812) FAM76B (ENSAPLG00000003717) SESN3 (ENSAPLG00000003440) ENDOD1 (ENSAPLG00000025860) CWC15 (ENSAPLG00000003221) AMOTL1 (ENSAPLG00000002742) FUT4 (ENSAPLG00000019961) C11orf97 (ENSAPLG00000019178) MRE11 (ENSAPLG00000021936) PANX1 (ENSAPLG00000016177) ENSAPLG00000027891 HEPHL1 (ENSAPLG00000015713) ENSAPLG00000015524 ENSAPLG00000015429 Phasianidae ANCESTRAL SPECIES ENSGT00940000166491 ENSGT00940000154907.b ENSGT00940000161159 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT00950000182865.b.b.b.c.a.i.a.b.b ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000153972.A ENSGT00940000157994.b ENSGT01030000234590.A.a.b ENSGT00940000166029.d Japanese quail DUPLICATION Japanese quail MODERN SPECIES TMEM123 (ENSCJPG00005003755) ENSCJPG00005003757 ENSCJPG00005003758 YAP1 (ENSCJPG00005003761) CFAP300 (ENSCJPG00005003768) ENSCJPG00005003770 ANGPTL5 (ENSCJPG00005003777) ENSCJPG00005003791 TRPC6 (ENSCJPG00005003793) PGR (ENSCJPG00005003805) ARHGAP42 (ENSCJPG00005003808) CNTN5 (ENSCJPG00005003828) ENSCJPG00005003843 CCDC82 (ENSCJPG00005003846) ENSCJPG00005003847 ##22 ENSCJPG00005003848 ##22 MTMR2 (ENSCJPG00005003852) CEP57 (ENSCJPG00005003853) FAM76B (ENSCJPG00005003854) SESN3 (ENSCJPG00005003931) ENDOD1 (ENSCJPG00005003932) CWC15 (ENSCJPG00005003933) AMOTL1 (ENSCJPG00005003951) FUT4 (ENSCJPG00005003953) C11orf97 (ENSCJPG00005003956) ANKRD49 (ENSCJPG00005003958) MRE11 (ENSCJPG00005003960) GPR83 (ENSCJPG00005003962) PANX1 (ENSCJPG00005003965) ENSCJPG00005003967 ENSCJPG00005003971 Japanese quail MODERN SPECIES ENSCJPG00005003728 TMEM123 (ENSCJPG00005003755) ENSCJPG00005003757 ENSCJPG00005003758 YAP1 (ENSCJPG00005003761) CFAP300 (ENSCJPG00005003768) ENSCJPG00005003770 ANGPTL5 (ENSCJPG00005003777) ENSCJPG00005003791 TRPC6 (ENSCJPG00005003793) PGR (ENSCJPG00005003805) ARHGAP42 (ENSCJPG00005003808) CNTN5 (ENSCJPG00005003828) ENSCJPG00005003843 CCDC82 (ENSCJPG00005003846) ENSCJPG00005003847 ##22 ENSCJPG00005003848 ##22 MTMR2 (ENSCJPG00005003852) CEP57 (ENSCJPG00005003853) FAM76B (ENSCJPG00005003854) SESN3 (ENSCJPG00005003931) ENDOD1 (ENSCJPG00005003932) CWC15 (ENSCJPG00005003933) AMOTL1 (ENSCJPG00005003951) FUT4 (ENSCJPG00005003953) C11orf97 (ENSCJPG00005003956) ANKRD49 (ENSCJPG00005003958) MRE11 (ENSCJPG00005003960) GPR83 (ENSCJPG00005003962) PANX1 (ENSCJPG00005003965) ENSCJPG00005003967 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000166491 ENSGT00940000154907.b ENSGT00940000161159 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT00950000182865.b.b.b.c.a.i.a.b.b ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000153972.A ENSGT00940000157994.b ENSGT01030000234590.A.a.b ENSGT00940000166029.d Chicken MODERN SPECIES ENSGALG00010007959 ENSGALG00010007961 ENSGALG00010007967 ENSGALG00010007971 ENSGALG00010007974 ENSGALG00010007421 ENSGALG00010007362 ENSGALG00010007411 ENSGALG00010007295 ENSGALG00010007309 TRPC6 (ENSGALG00010007455) PGR (ENSGALG00010008178) ARHGAP42 (ENSGALG00010008218) CNTN5 (ENSGALG00010008242) CCDC82 (ENSGALG00010008258) MAML2 (ENSGALG00010008267) ##22 MTMR2 (ENSGALG00010008289) ENSGALG00010008302 CEP57 (ENSGALG00010008317) FAM76B (ENSGALG00010008339) SESN3 (ENSGALG00010008386) ENDOD1 (ENSGALG00010008395) CWC15 (ENSGALG00010008409) AMOTL1 (ENSGALG00010008453) FUT4 (ENSGALG00010009149) C11orf97 (ENSGALG00010008466) ANKRD49 (ENSGALG00010008492) MRE11 (ENSGALG00010008516) GPR83 (ENSGALG00010008529) PANX1 (ENSGALG00010008580) ENSGALG00010009160 Turkey MODERN SPECIES ENSMGAG00000021668 ENSMGAG00000015131 ENSMGAG00000015130 ENSMGAG00000015129 ENSMGAG00000015612 ENSMGAG00000015128 ENSMGAG00000021286 ENSMGAG00000015126 ENSMGAG00000022671 ENSMGAG00000015123 ENSMGAG00000015124 ZDHHC20 (ENSMGAG00000015122) MRPL57 (ENSMGAG00000015610) FGF9 (ENSMGAG00000021422) CCDC82 (ENSMGAG00000015184) MAML2 (ENSMGAG00000015186) ##22 MTMR2 (ENSMGAG00000015187) CEP57 (ENSMGAG00000015188) FAM76B (ENSMGAG00000015189) SESN3 (ENSMGAG00000015191) ENDOD1 (ENSMGAG00000020832) CWC15 (ENSMGAG00000015193) SMCO4 (ENSMGAG00000021417) ENSMGAG00000015214 C11orf54 (ENSMGAG00000015205) ENSMGAG00000015206 ENSMGAG00000015202 ENSMGAG00000015203 ENSMGAG00000015204 ENSMGAG00000015200 ENSMGAG00000015201 African ostrich MODERN SPECIES 256 CCDC82 (ENSSCUG00000004205) MAML2 (ENSSCUG00000004207) ##22 MTMR2 (ENSSCUG00000004208) CEP57 (ENSSCUG00000004215) FAM76B (ENSSCUG00000004219) SESN3 (ENSSCUG00000004225) ENDOD1 (ENSSCUG00000004227) CWC15 (ENSSCUG00000004228) ENSSCUG00000004229 ENSSCUG00000004231 FUT4 (ENSSCUG00000004234) ENSSCUG00000004236 ANKRD49 (ENSSCUG00000004239) MRE11 (ENSSCUG00000004242) Australian saltwater crocodile MODERN SPECIES 27 MMP20 (ENSCPRG00005014825) ENSCPRG00005014827 ENSCPRG00005014829 MMP7 (ENSCPRG00005014833) TMEM123 (ENSCPRG00005014837) ENSCPRG00005014841 YAP1 (ENSCPRG00005014865) CFAP300 (ENSCPRG00005014867) CEP126 (ENSCPRG00005014875) ANGPTL5 (ENSCPRG00005014880) TRPC6 (ENSCPRG00005014918) PGR (ENSCPRG00005014963) ARHGAP42 (ENSCPRG00005014996) CNTN5 (ENSCPRG00005015041) CCDC82 (ENSCPRG00005015051) MAML2 (ENSCPRG00005015057) ##22 MTMR2 (ENSCPRG00005015062) CEP57 (ENSCPRG00005015066) FAM76B (ENSCPRG00005015082) SESN3 (ENSCPRG00005015169) ENDOD1 (ENSCPRG00005015178) CWC15 (ENSCPRG00005015180) AMOTL1 (ENSCPRG00005015195) PIWIL4 (ENSCPRG00005015220) FUT4 (ENSCPRG00005015235) ENSCPRG00005015245 MRE11 (ENSCPRG00005015256) GPR83 (ENSCPRG00005015271) ENSCPRG00005015273 ENSCPRG00005015275 ENSCPRG00005015292 Cryptodira ANCESTRAL SPECIES ENSGT00940000166491 ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000154907.a.a ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A Chinese turtle MODERN SPECIES 1501 ENSPSIG00000001413 CNTN5 (ENSPSIG00000011284) ENSPSIG00000001428 ENSPSIG00000001435 ENSPSIG00000001441 CCDC82 (ENSPSIG00000006535) MAML2 (ENSPSIG00000006959) ##22 MTMR2 (ENSPSIG00000007389) CEP57 (ENSPSIG00000011086) FAM76B (ENSPSIG00000011942) Testudinoidea ANCESTRAL SPECIES 1 ENSGT00940000166491.a.a ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000154907.a.a ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A Emydidae ANCESTRAL SPECIES 19 ENSGT00940000154907.b.h.b ENSGT00940000154907.b.h.a ENSGT00940000161159 ENSGT00940000154907.a.a ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A ENSGT00940000157994 Three-toed box turtle MODERN SPECIES 41 MMP27 (ENSTMTG00000007165) ENSTMTG00000007074 ENSTMTG00000007041 YAP1 (ENSTMTG00000007019) CFAP300 (ENSTMTG00000006981) CEP126 (ENSTMTG00000006950) ANGPTL5 (ENSTMTG00000006917) TRPC6 (ENSTMTG00000006827) PGR (ENSTMTG00000021226) ARHGAP42 (ENSTMTG00000021206) CNTN5 (ENSTMTG00000020897) CCDC82 (ENSTMTG00000020843) MAML2 (ENSTMTG00000020833) ##22 MTMR2 (ENSTMTG00000020816) CEP57 (ENSTMTG00000020801) FAM76B (ENSTMTG00000020789) SESN3 (ENSTMTG00000020784) ENDOD1 (ENSTMTG00000020781) CWC15 (ENSTMTG00000020776) AMOTL1 (ENSTMTG00000020714) PIWIL4 (ENSTMTG00000020697) FUT4 (ENSTMTG00000020687) C11orf97 (ENSTMTG00000020677) ANKRD49 (ENSTMTG00000020673) ENSTMTG00000020664 ENSTMTG00000020654 GPR83 (ENSTMTG00000020649) ENSTMTG00000020644 painted turtle DUPLICATION painted turtle MODERN SPECIES 897 ENSCPBG00000024057 ##22 MTMR2 (ENSCPBG00000024054) CEP57 (ENSCPBG00000024051) FAM76B (ENSCPBG00000024048) SESN3 (ENSCPBG00000024045) ENDOD1 (ENSCPBG00000024041) CWC15 (ENSCPBG00000024037) AMOTL1 (ENSCPBG00000024034) PIWIL4 (ENSCPBG00000024031) ENSCPBG00000024029 FUT4 (ENSCPBG00000024027) C11orf97 (ENSCPBG00000024025) ANKRD49 (ENSCPBG00000024024) MRE11 (ENSCPBG00000024022) GPR83 (ENSCPBG00000024017) PANX1 (ENSCPBG00000024014) painted turtle MODERN SPECIES 2367 ENSCPBG00000027446 ENSCPBG00000027444 ENSCPBG00000027443 MMP27 (ENSCPBG00000027441) ENSCPBG00000027439 TMEM123 (ENSCPBG00000027438) ENSCPBG00000027435 YAP1 (ENSCPBG00000027430) CEP126 (ENSCPBG00000027420) ANGPTL5 (ENSCPBG00000027415) TRPC6 (ENSCPBG00000027413) ENSCPBG00000027411 ARHGAP42 (ENSCPBG00000027408) CNTN5 (ENSCPBG00000027396) CCDC82 (ENSCPBG00000027381) ENSCPBG00000027378 ##22 Testudinidae ANCESTRAL SPECIES ENSGT00940000154907.b ENSGT00940000161159 ENSGT00940000154907.a.a ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A Abingdon island giant tortoise MODERN SPECIES 2391 MAML2 (ENSCABG00000022488) ##22 ENSCABG00000022489 MTMR2 (ENSCABG00000022491) CEP57 (ENSCABG00000022493) ENSCABG00000022494 FAM76B (ENSCABG00000022496) SESN3 (ENSCABG00000022517) ENDOD1 (ENSCABG00000022523) CWC15 (ENSCABG00000022524) ENSCABG00000022525 PIWIL4 (ENSCABG00000022526) ENSCABG00000022529 FUT4 (ENSCABG00000022530) C11orf97 (ENSCABG00000022532) Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES ENSGEVG00005008403 MMP1 (ENSGEVG00005008386) MMP27 (ENSGEVG00005008369) MMP7 (ENSGEVG00005008346) ENSGEVG00005008335 YAP1 (ENSGEVG00005008309) CFAP300 (ENSGEVG00005008286) CEP126 (ENSGEVG00005008250) ANGPTL5 (ENSGEVG00005008220) TRPC6 (ENSGEVG00005008171) PGR (ENSGEVG00005008127) ARHGAP42 (ENSGEVG00005008027) CNTN5 (ENSGEVG00005007749) CCDC82 (ENSGEVG00005007622) ENSGEVG00005007596 ##22 ENSGEVG00005007582 ##22 ENSGEVG00005007569 MTMR2 (ENSGEVG00005007507) CEP57 (ENSGEVG00005007470) FAM76B (ENSGEVG00005007437) SESN3 (ENSGEVG00005007415) ENDOD1 (ENSGEVG00005007403) CWC15 (ENSGEVG00005007384) AMOTL1 (ENSGEVG00005007334) PIWIL4 (ENSGEVG00005006224) FUT4 (ENSGEVG00005006031) C11orf97 (ENSGEVG00005006010) ANKRD49 (ENSGEVG00005005970) MRE11 (ENSGEVG00005005932) GPR83 (ENSGEVG00005005900) ENSGEVG00005005884 Goode s thornscrub tortoise MODERN SPECIES ENSGEVG00005008434 ENSGEVG00005008403 MMP1 (ENSGEVG00005008386) MMP27 (ENSGEVG00005008369) MMP7 (ENSGEVG00005008346) ENSGEVG00005008335 YAP1 (ENSGEVG00005008309) CFAP300 (ENSGEVG00005008286) CEP126 (ENSGEVG00005008250) ANGPTL5 (ENSGEVG00005008220) TRPC6 (ENSGEVG00005008171) PGR (ENSGEVG00005008127) ARHGAP42 (ENSGEVG00005008027) CNTN5 (ENSGEVG00005007749) CCDC82 (ENSGEVG00005007622) ENSGEVG00005007596 ##22 ENSGEVG00005007582 ##22 ENSGEVG00005007569 MTMR2 (ENSGEVG00005007507) CEP57 (ENSGEVG00005007470) FAM76B (ENSGEVG00005007437) SESN3 (ENSGEVG00005007415) ENDOD1 (ENSGEVG00005007403) CWC15 (ENSGEVG00005007384) AMOTL1 (ENSGEVG00005007334) PIWIL4 (ENSGEVG00005006224) FUT4 (ENSGEVG00005006031) C11orf97 (ENSGEVG00005006010) ANKRD49 (ENSGEVG00005005970) MRE11 (ENSGEVG00005005932) GPR83 (ENSGEVG00005005900) Mammalia ANCESTRAL SPECIES 73 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000156340.b ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00940000153972.A Platypus MODERN SPECIES 12 MMP1 (ENSOANG00000010480) MMP8 (ENSOANG00000010484) ENSOANG00000047319 ENSOANG00000046987 ENSOANG00000010486 YAP1 (ENSOANG00000010488) CFAP300 (ENSOANG00000010489) ENSOANG00000010490 ANGPTL5 (ENSOANG00000010491) TRPC6 (ENSOANG00000010492) ENSOANG00000010494 ARHGAP42 (ENSOANG00000010495) CNTN5 (ENSOANG00000010496) ENSOANG00000010497 ENSOANG00000043963 ##22 MAML2 (ENSOANG00000010498) ##22 MTMR2 (ENSOANG00000010499) CEP57 (ENSOANG00000040575) FAM76B (ENSOANG00000045559) SESN3 (ENSOANG00000010503) ENSOANG00000010505 ENSOANG00000010405 ENSOANG00000010404 AMOTL1 (ENSOANG00000010403) ENSOANG00000038002 ENSOANG00000029843 ANKRD49 (ENSOANG00000010402) MRE11 (ENSOANG00000010399) GPR83 (ENSOANG00000040634) PANX1 (ENSOANG00000011723) HEPHL1 (ENSOANG00000011719) Theria ANCESTRAL SPECIES 15 ENSGT00940000161277 ENSGT00940000156340.b ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Eutheria ANCESTRAL SPECIES 3 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Atlantogenata ANCESTRAL SPECIES 40 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000153972.A Afrotheria ANCESTRAL SPECIES 43 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000153972.A Tenrec MODERN SPECIES 7589 ENSETEG00000001003 ##22 MTMR2 (ENSETEG00000000998) CEP57 (ENSETEG00000000996) FAM76B (ENSETEG00000000993) Afrotheria_a ANCESTRAL SPECIES 41 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000153972.A Hyrax MODERN SPECIES 6301 MAML2 (ENSPCAG00000015600) ##22 Elephant MODERN SPECIES 340 MMP7 (ENSLAFG00000002955) ENSLAFG00000002954 BIRC2 (ENSLAFG00000002953) BIRC3 (ENSLAFG00000006047) YAP1 (ENSLAFG00000003216) CFAP300 (ENSLAFG00000003215) CEP126 (ENSLAFG00000003624) ANGPTL5 (ENSLAFG00000003621) TRPC6 (ENSLAFG00000015085) ENSLAFG00000006479 ARHGAP42 (ENSLAFG00000012625) CNTN5 (ENSLAFG00000029736) ENSLAFG00000026948 JRKL (ENSLAFG00000032743) CCDC82 (ENSLAFG00000000217) MAML2 (ENSLAFG00000001279) ##22 MTMR2 (ENSLAFG00000008600) CEP57 (ENSLAFG00000014511) FAM76B (ENSLAFG00000014029) SESN3 (ENSLAFG00000001537) ENDOD1 (ENSLAFG00000010482) ENSLAFG00000028723 KDM4D (ENSLAFG00000004460) CWC15 (ENSLAFG00000004456) AMOTL1 (ENSLAFG00000022009) PIWIL4 (ENSLAFG00000008418) FUT4 (ENSLAFG00000008415) ANKRD49 (ENSLAFG00000003825) MRE11 (ENSLAFG00000016373) GPR83 (ENSLAFG00000016367) IZUMO1R (ENSLAFG00000032394) Xenarthra ANCESTRAL SPECIES 895 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A Armadillo MODERN SPECIES 4533 CCDC82 (ENSDNOG00000006456) MAML2 (ENSDNOG00000045831) ##22 MTMR2 (ENSDNOG00000007504) CEP57 (ENSDNOG00000007492) Sloth MODERN SPECIES 6719 MAML2 (ENSCHOG00000011278) ##22 Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00530000063929.b ENSGT00940000154175.j ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00910000147289 ENSGT00390000003919 ENSGT00390000017288 Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00910000147289 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183201.a ##22 Common shrew MODERN SPECIES 5977 ENSSARG00000007554 ##22 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00910000147289 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Artiodactyla ANCESTRAL SPECIES 1 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Suina ANCESTRAL SPECIES 5 ENSGT00530000063929.b ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01070000257273 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Chacoan peccary MODERN SPECIES 30 JRKL (ENSCWAG00000001572) CCDC82 (ENSCWAG00000001593) MAML2 (ENSCWAG00000001702) ##22 MTMR2 (ENSCWAG00000001726) CEP57 (ENSCWAG00000001747) FAM76B (ENSCWAG00000001765) SESN3 (ENSCWAG00000001788) ENDOD1 (ENSCWAG00000001818) KDM4D (ENSCWAG00000001831) ENSCWAG00000001839 CWC15 (ENSCWAG00000001851) AMOTL1 (ENSCWAG00000001874) PIWIL4 (ENSCWAG00000001925) ENSCWAG00000001987 ENSCWAG00000001993 ANKRD49 (ENSCWAG00000002004) MRE11 (ENSCWAG00000002025) NACA2 (ENSCWAG00000002065) Pig MODERN SPECIES 17 BIRC3 (ENSSSCG00000027529) YAP1 (ENSSSCG00000031429) CFAP300 (ENSSSCG00000014980) CEP126 (ENSSSCG00000014979) ANGPTL5 (ENSSSCG00000014978) ENSSSCG00000061774 TRPC6 (ENSSSCG00000024022) PGR (ENSSSCG00000014977) ARHGAP42 (ENSSSCG00000014976) CNTN5 (ENSSSCG00000014975) ENSSSCG00000054749 ENSSSCG00000055851 JRKL (ENSSSCG00000034924) CCDC82 (ENSSSCG00000014972) ENSSSCG00000042256 MAML2 (ENSSSCG00000034879) ##22 ENSSSCG00000056982 MTMR2 (ENSSSCG00000014970) ENSSSCG00000014969 FAM76B (ENSSSCG00000014967) ENSSSCG00000041491 SESN3 (ENSSSCG00000037015) ENDOD1 (ENSSSCG00000014965) ENSSSCG00000054911 ENSSSCG00000057445 ENSSSCG00000057084 ENSSSCG00000036400 ENSSSCG00000034794 ENSSSCG00000031376 CWC15 (ENSSSCG00000014961) AMOTL1 (ENSSSCG00000014960) Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00910000147719.a ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Pecora ANCESTRAL SPECIES 7 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00910000147719.a ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.k ENSGT00940000162152.l ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00940000155627 ENSGT00940000157765 ENSGT00940000158563 Yarkand deer MODERN SPECIES BIRC2 (ENSCHYG00000000902) BIRC3 (ENSCHYG00000000926) YAP1 (ENSCHYG00000000950) CFAP300 (ENSCHYG00000000983) CEP126 (ENSCHYG00000001029) ANGPTL5 (ENSCHYG00000001077) TRPC6 (ENSCHYG00000001196) ENSCHYG00000001237 ENSCHYG00000001249 PGR (ENSCHYG00000001265) ARHGAP42 (ENSCHYG00000001400) CNTN5 (ENSCHYG00000001656) ENSCHYG00000001741 JRKL (ENSCHYG00000001755) CCDC82 (ENSCHYG00000001774) MAML2 (ENSCHYG00000001814) ##22 ENSCHYG00000001826 MTMR2 (ENSCHYG00000001840) CEP57 (ENSCHYG00000001878) FAM76B (ENSCHYG00000001944) SESN3 (ENSCHYG00000002070) ENSCHYG00000002108 ENDOD1 (ENSCHYG00000002117) ENSCHYG00000002131 CWC15 (ENSCHYG00000002143) AMOTL1 (ENSCHYG00000002196) PIWIL4 (ENSCHYG00000002347) FUT4 (ENSCHYG00000002405) C11orf97 (ENSCHYG00000002417) CWF19L2 (ENSCHYG00000002441) ENSCHYG00000002475 Percora_a ANCESTRAL SPECIES 6 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00910000147719.a ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.k ENSGT00940000162152.l ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00940000155627 ENSGT00940000157765 ENSGT00940000158563 Bovidae ANCESTRAL SPECIES 6 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00910000147719.a ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.k ENSGT00940000162152.l ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00940000155627 ENSGT00940000157765 ENSGT00940000158563 Caprinae ANCESTRAL SPECIES 6 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000153525.g.b.a.l ENSGT00940000161513 ENSGT00390000004986.b ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.k ENSGT00940000162152.l ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00940000155627 ENSGT00940000157765 ENSGT00940000158563 Goat DUPLICATION Goat MODERN SPECIES 6 CFAP300 (ENSCHIG00000009065) CEP126 (ENSCHIG00000010122) ANGPTL5 (ENSCHIG00000020358) TRPC6 (ENSCHIG00000012921) PGR (ENSCHIG00000021765) ARHGAP42 (ENSCHIG00000024088) ENSCHIG00000014784 CNTN5 (ENSCHIG00000008692) ENSCHIG00000025381 ENSCHIG00000012754 ENSCHIG00000008854 ENSCHIG00000026137 JRKL (ENSCHIG00000013254) ENSCHIG00000025173 ENSCHIG00000012117 ##22 ENSCHIG00000011629 ##22 ENSCHIG00000017915 MTMR2 (ENSCHIG00000016981) CEP57 (ENSCHIG00000013402) FAM76B (ENSCHIG00000020487) SESN3 (ENSCHIG00000025523) ENDOD1 (ENSCHIG00000013572) ENSCHIG00000023466 ENSCHIG00000009843 CWC15 (ENSCHIG00000013423) AMOTL1 (ENSCHIG00000007539) PIWIL4 (ENSCHIG00000007777) FUT4 (ENSCHIG00000013426) C11orf97 (ENSCHIG00000025332) CWF19L2 (ENSCHIG00000013182) ENSCHIG00000016274 Goat MODERN SPECIES 6 YAP1 (ENSCHIG00000017090) CFAP300 (ENSCHIG00000009065) CEP126 (ENSCHIG00000010122) ANGPTL5 (ENSCHIG00000020358) TRPC6 (ENSCHIG00000012921) PGR (ENSCHIG00000021765) ARHGAP42 (ENSCHIG00000024088) ENSCHIG00000014784 CNTN5 (ENSCHIG00000008692) ENSCHIG00000025381 ENSCHIG00000012754 ENSCHIG00000008854 ENSCHIG00000026137 JRKL (ENSCHIG00000013254) ENSCHIG00000025173 ENSCHIG00000012117 ##22 ENSCHIG00000011629 ##22 ENSCHIG00000017915 MTMR2 (ENSCHIG00000016981) CEP57 (ENSCHIG00000013402) FAM76B (ENSCHIG00000020487) SESN3 (ENSCHIG00000025523) ENDOD1 (ENSCHIG00000013572) ENSCHIG00000023466 ENSCHIG00000009843 CWC15 (ENSCHIG00000013423) AMOTL1 (ENSCHIG00000007539) PIWIL4 (ENSCHIG00000007777) FUT4 (ENSCHIG00000013426) C11orf97 (ENSCHIG00000025332) CWF19L2 (ENSCHIG00000013182) Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 6 BIRC2 (ENSOARG00020020262) ENSOARG00020020385 BIRC3 (ENSOARG00020020405) YAP1 (ENSOARG00020020483) CFAP300 (ENSOARG00020021370) ANGPTL5 (ENSOARG00020021669) TRPC6 (ENSOARG00020021734) ARHGAP42 (ENSOARG00020022418) ENSOARG00020022833 CNTN5 (ENSOARG00020022860) ENSOARG00020023102 ENSOARG00020023161 ENSOARG00020023185 JRKL (ENSOARG00020023202) ENSOARG00020023333 ##22 MAML2 (ENSOARG00020023344) ##22 ENSOARG00020023366 CEP57 (ENSOARG00020023483) FAM76B (ENSOARG00020023594) SESN3 (ENSOARG00020023675) ENDOD1 (ENSOARG00020023802) KDM4D (ENSOARG00020023815) CWC15 (ENSOARG00020023834) AMOTL1 (ENSOARG00020023880) PIWIL4 (ENSOARG00020024217) ENSOARG00020024270 FUT4 (ENSOARG00020024279) C11orf97 (ENSOARG00020024290) CWF19L2 (ENSOARG00020024318) OTX2 (ENSOARG00020024485) GUCY1A2 (ENSOARG00020024499) Rambouillet Sheep MODERN SPECIES 6 MMP7 (ENSOARG00020020219) BIRC2 (ENSOARG00020020262) ENSOARG00020020385 BIRC3 (ENSOARG00020020405) YAP1 (ENSOARG00020020483) CFAP300 (ENSOARG00020021370) ANGPTL5 (ENSOARG00020021669) TRPC6 (ENSOARG00020021734) ARHGAP42 (ENSOARG00020022418) ENSOARG00020022833 CNTN5 (ENSOARG00020022860) ENSOARG00020023102 ENSOARG00020023161 ENSOARG00020023185 JRKL (ENSOARG00020023202) ENSOARG00020023333 ##22 MAML2 (ENSOARG00020023344) ##22 ENSOARG00020023366 CEP57 (ENSOARG00020023483) FAM76B (ENSOARG00020023594) SESN3 (ENSOARG00020023675) ENDOD1 (ENSOARG00020023802) KDM4D (ENSOARG00020023815) CWC15 (ENSOARG00020023834) AMOTL1 (ENSOARG00020023880) PIWIL4 (ENSOARG00020024217) ENSOARG00020024270 FUT4 (ENSOARG00020024279) C11orf97 (ENSOARG00020024290) CWF19L2 (ENSOARG00020024318) OTX2 (ENSOARG00020024485) Bovinae ANCESTRAL SPECIES 21 ENSGT00530000063929.b ENSGT00910000147719.a ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000003682.gb.a.d.a.b.a ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00940000153117.B.c.b ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.k ENSGT00940000162152.l ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00940000155627 ENSGT00940000157765 Bos ANCESTRAL SPECIES 20 ENSGT00910000147719.a ENSGT00940000154175.i.b.l ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000003682.gb.a.d.a.b.a ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00940000153117.B.c.b ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.k ENSGT00940000162152.l ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00940000155627 ENSGT00940000157765 Bos_a ANCESTRAL SPECIES 15 ENSGT00910000147719.a ENSGT00940000154175.i.b.l ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000003682.gb.a.d.a.b.a ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00940000153117.B.c.b ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.k ENSGT00940000162152.l ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00940000155627 ENSGT00940000157765 Domestic yak MODERN SPECIES 4 BIRC3 (ENSBGRG00000016714) ENSBGRG00000016649 YAP1 (ENSBGRG00000016272) ENSBGRG00000016235 CFAP300 (ENSBGRG00000015991) CEP126 (ENSBGRG00000015803) ANGPTL5 (ENSBGRG00000015671) TRPC6 (ENSBGRG00000015265) PGR (ENSBGRG00000015051) ENSBGRG00000015030 ARHGAP42 (ENSBGRG00000014431) ENSBGRG00000014381 CNTN5 (ENSBGRG00000013816) ENSBGRG00000013770 CCDC82 (ENSBGRG00000013494) MAML2 (ENSBGRG00000013332) ##22 MTMR2 (ENSBGRG00000013219) CEP57 (ENSBGRG00000012542) FAM76B (ENSBGRG00000012187) ENSBGRG00000012109 SESN3 (ENSBGRG00000011794) ENDOD1 (ENSBGRG00000011722) ENSBGRG00000011701 ENSBGRG00000011618 CWC15 (ENSBGRG00000011403) AMOTL1 (ENSBGRG00000010809) PIWIL4 (ENSBGRG00000010477) FUT4 (ENSBGRG00000010445) C11orf97 (ENSBGRG00000010391) CWF19L2 (ENSBGRG00000010092) GUCY1A2 (ENSBGRG00000009963) Wild yak MODERN SPECIES 1101 ENSBMUG00000005778 JRKL (ENSBMUG00000005768) CCDC82 (ENSBMUG00000005746) MAML2 (ENSBMUG00000005699) ##22 MTMR2 (ENSBMUG00000005633) CEP57 (ENSBMUG00000005592) FAM76B (ENSBMUG00000005565) Bos_b ANCESTRAL SPECIES 19 ENSGT00940000154175.i.b.l.a ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559.d.b ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000047559.c ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000003682.gb.a.d.a.b.a ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.k ENSGT00940000154517.gb.a.a.b.b ENSGT00940000162152.l ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00940000155627 ENSGT00940000157765 Hybrid Bos Indicus MODERN SPECIES 6 ENSBIXG00005015904 BIRC3 (ENSBIXG00005002521) YAP1 (ENSBIXG00005016306) ENSBIXG00005000087 ENSBIXG00005002602 CEP126 (ENSBIXG00005016413) ANGPTL5 (ENSBIXG00005016445) TRPC6 (ENSBIXG00005002629) PGR (ENSBIXG00005016631) ARHGAP42 (ENSBIXG00005002766) ENSBIXG00005017120 CNTN5 (ENSBIXG00005017345) ENSBIXG00005017419 JRKL (ENSBIXG00005017457) CCDC82 (ENSBIXG00005017501) MAML2 (ENSBIXG00005017561) ##22 MTMR2 (ENSBIXG00005017635) CEP57 (ENSBIXG00005017776) FAM76B (ENSBIXG00005017806) SESN3 (ENSBIXG00005002907) ENDOD1 (ENSBIXG00005002914) ENSBIXG00005017939 ENSBIXG00005017950 ENSBIXG00005017962 CWC15 (ENSBIXG00005002919) AMOTL1 (ENSBIXG00005002944) PIWIL4 (ENSBIXG00005018252) FUT4 (ENSBIXG00005018272) C11orf97 (ENSBIXG00005018281) CWF19L2 (ENSBIXG00005018327) GUCY1A2 (ENSBIXG00005018531) Cow MODERN SPECIES 6 ENSBTAG00000052956 BIRC2 (ENSBTAG00000035735) BIRC3 (ENSBTAG00000024918) YAP1 (ENSBTAG00000039307) CFAP300 (ENSBTAG00000015309) CEP126 (ENSBTAG00000020032) ANGPTL5 (ENSBTAG00000005308) TRPC6 (ENSBTAG00000011227) PGR (ENSBTAG00000024648) ARHGAP42 (ENSBTAG00000004423) CNTN5 (ENSBTAG00000020466) ENSBTAG00000054100 ENSBTAG00000051087 JRKL (ENSBTAG00000037488) CCDC82 (ENSBTAG00000006581) MAML2 (ENSBTAG00000037962) ##22 MTMR2 (ENSBTAG00000016557) CEP57 (ENSBTAG00000016547) FAM76B (ENSBTAG00000020748) SESN3 (ENSBTAG00000004034) ENDOD1 (ENSBTAG00000024803) ENSBTAG00000053613 ENSBTAG00000050139 ENSBTAG00000001704 CWC15 (ENSBTAG00000007913) AMOTL1 (ENSBTAG00000018945) PIWIL4 (ENSBTAG00000014910) FUT4 (ENSBTAG00000038062) C15H11orf97 (ENSBTAG00000040449) ENSBTAG00000052218 CWF19L2 (ENSBTAG00000018629) American bison DUPLICATION American bison MODERN SPECIES 3336 JRKL (ENSBBBG00000000629) ENSBBBG00000000627 ENSBBBG00000000624 ##22 MAML2 (ENSBBBG00000000617) ##22 MTMR2 (ENSBBBG00000000564) CEP57 (ENSBBBG00000005527) FAM76B (ENSBBBG00000005531) ENSBBBG00000020456 SESN3 (ENSBBBG00000020468) ENDOD1 (ENSBBBG00000020475) ENSBBBG00000020484 ENSBBBG00000006788 CWC15 (ENSBBBG00000020504) AMOTL1 (ENSBBBG00000005544) PIWIL4 (ENSBBBG00000020571) American bison MODERN SPECIES 3336 JRKL (ENSBBBG00000000629) ENSBBBG00000000627 ENSBBBG00000000624 ##22 MAML2 (ENSBBBG00000000617) ##22 MTMR2 (ENSBBBG00000000564) CEP57 (ENSBBBG00000005527) FAM76B (ENSBBBG00000005531) ENSBBBG00000020456 SESN3 (ENSBBBG00000020468) ENDOD1 (ENSBBBG00000020475) ENSBBBG00000020484 ENSBBBG00000006788 CWC15 (ENSBBBG00000020504) AMOTL1 (ENSBBBG00000005544) PIWIL4 (ENSBBBG00000020571) Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 1172 ENSMMSG00000020239 ENSMMSG00000020213 YAP1 (ENSMMSG00000019446) CFAP300 (ENSMMSG00000019347) CEP126 (ENSMMSG00000019297) ANGPTL5 (ENSMMSG00000019261) TRPC6 (ENSMMSG00000019068) PGR (ENSMMSG00000018992) ARHGAP42 (ENSMMSG00000018863) ENSMMSG00000018817 CNTN5 (ENSMMSG00000018181) ENSMMSG00000018121 JRKL (ENSMMSG00000018096) CCDC82 (ENSMMSG00000018018) ENSMMSG00000017987 ##22 MAML2 (ENSMMSG00000017946) ##22 MTMR2 (ENSMMSG00000017890) CEP57 (ENSMMSG00000017678) FAM76B (ENSMMSG00000017563) SESN3 (ENSMMSG00000017468) ENDOD1 (ENSMMSG00000017446) ENSMMSG00000017424 CWC15 (ENSMMSG00000017389) AMOTL1 (ENSMMSG00000017300) PIWIL4 (ENSMMSG00000017182) ENSMMSG00000017150 FUT4 (ENSMMSG00000017132) C11orf97 (ENSMMSG00000017113) CWF19L2 (ENSMMSG00000017060) ENSMMSG00000017036 ENSMMSG00000017016 Siberian musk deer MODERN SPECIES 1172 ENSMMSG00000020291 ENSMMSG00000020239 ENSMMSG00000020213 YAP1 (ENSMMSG00000019446) CFAP300 (ENSMMSG00000019347) CEP126 (ENSMMSG00000019297) ANGPTL5 (ENSMMSG00000019261) TRPC6 (ENSMMSG00000019068) PGR (ENSMMSG00000018992) ARHGAP42 (ENSMMSG00000018863) ENSMMSG00000018817 CNTN5 (ENSMMSG00000018181) ENSMMSG00000018121 JRKL (ENSMMSG00000018096) CCDC82 (ENSMMSG00000018018) ENSMMSG00000017987 ##22 MAML2 (ENSMMSG00000017946) ##22 MTMR2 (ENSMMSG00000017890) CEP57 (ENSMMSG00000017678) FAM76B (ENSMMSG00000017563) SESN3 (ENSMMSG00000017468) ENDOD1 (ENSMMSG00000017446) ENSMMSG00000017424 CWC15 (ENSMMSG00000017389) AMOTL1 (ENSMMSG00000017300) PIWIL4 (ENSMMSG00000017182) ENSMMSG00000017150 FUT4 (ENSMMSG00000017132) C11orf97 (ENSMMSG00000017113) CWF19L2 (ENSMMSG00000017060) ENSMMSG00000017036 Cetacea ANCESTRAL SPECIES 4 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.n.a ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Blue whale MODERN SPECIES 19 ENSBMSG00010006981 BIRC2 (ENSBMSG00010007026) BIRC3 (ENSBMSG00010007044) YAP1 (ENSBMSG00010007087) CFAP300 (ENSBMSG00010007148) CEP126 (ENSBMSG00010007195) ANGPTL5 (ENSBMSG00010007219) TRPC6 (ENSBMSG00010007259) PGR (ENSBMSG00010007436) ARHGAP42 (ENSBMSG00010007547) CNTN5 (ENSBMSG00010007654) ENSBMSG00010007759 ENSBMSG00010007767 JRKL (ENSBMSG00010007778) CCDC82 (ENSBMSG00010007784) MAML2 (ENSBMSG00010007807) ##22 MTMR2 (ENSBMSG00010007830) CEP57 (ENSBMSG00010007898) FAM76B (ENSBMSG00010007931) SESN3 (ENSBMSG00010007953) ENDOD1 (ENSBMSG00010007966) ENSBMSG00010007972 ENSBMSG00010007975 ENSBMSG00010007984 ENSBMSG00010007988 CWC15 (ENSBMSG00010007991) AMOTL1 (ENSBMSG00010007997) ENSBMSG00010008011 ENSBMSG00010008013 ENSBMSG00010008018 C11orf97 (ENSBMSG00010008028) Odontoceti ANCESTRAL SPECIES 4 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.n.a ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Sperm whale MODERN SPECIES 7 MMP7 (ENSPCTG00005008052) ENSPCTG00005008079 TMEM123 (ENSPCTG00005008095) BIRC3 (ENSPCTG00005008131) YAP1 (ENSPCTG00005008267) CFAP300 (ENSPCTG00005008410) CEP126 (ENSPCTG00005008482) ANGPTL5 (ENSPCTG00005008552) TRPC6 (ENSPCTG00005008688) ENSPCTG00005009589 PGR (ENSPCTG00005009652) ARHGAP42 (ENSPCTG00005009957) CNTN5 (ENSPCTG00005010190) JRKL (ENSPCTG00005011023) CCDC82 (ENSPCTG00005011035) MAML2 (ENSPCTG00005011167) ##22 MTMR2 (ENSPCTG00005011244) CEP57 (ENSPCTG00005011292) FAM76B (ENSPCTG00005011532) SESN3 (ENSPCTG00005011709) ENSPCTG00005011830 ENSPCTG00005011881 ENDOD1 (ENSPCTG00005011905) ENSPCTG00005011937 ENSPCTG00005012004 ENSPCTG00005012039 CWC15 (ENSPCTG00005012079) AMOTL1 (ENSPCTG00005012114) PIWIL4 (ENSPCTG00005012159) FUT4 (ENSPCTG00005012401) C11orf97 (ENSPCTG00005012423) Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.n.a ENSGT00390000012084.w ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000153972.A Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00390000015164.v.a.a ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.n.a.b ENSGT00390000012084.w ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000153972.A Monodontidae ANCESTRAL SPECIES 2 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00390000015164.v.a.a ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.n.a.b ENSGT00390000012084.w ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000153972.A Beluga whale DUPLICATION Beluga whale MODERN SPECIES 87 BIRC2 (ENSDLEG00000019103) BIRC3 (ENSDLEG00000019114) YAP1 (ENSDLEG00000019132) CFAP300 (ENSDLEG00000019141) CEP126 (ENSDLEG00000019156) ANGPTL5 (ENSDLEG00000019199) TRPC6 (ENSDLEG00000019215) ENSDLEG00000019251 PGR (ENSDLEG00000019262) ARHGAP42 (ENSDLEG00000019294) ENSDLEG00000019322 ENSDLEG00000019330 ENSDLEG00000019332 JRKL (ENSDLEG00000019346) CCDC82 (ENSDLEG00000019354) ENSDLEG00000019362 ##22 ENSDLEG00000019364 ##22 MTMR2 (ENSDLEG00000008099) CEP57 (ENSDLEG00000008152) FAM76B (ENSDLEG00000008194) SESN3 (ENSDLEG00000008313) ENDOD1 (ENSDLEG00000008365) CWC15 (ENSDLEG00000008381) AMOTL1 (ENSDLEG00000008425) PIWIL4 (ENSDLEG00000008525) FUT4 (ENSDLEG00000008615) ANKRD49 (ENSDLEG00000008640) MRE11 (ENSDLEG00000008671) GPR83 (ENSDLEG00000008769) IZUMO1R (ENSDLEG00000008834) PANX1 (ENSDLEG00000009144) Beluga whale MODERN SPECIES 87 BIRC3 (ENSDLEG00000019114) YAP1 (ENSDLEG00000019132) CFAP300 (ENSDLEG00000019141) CEP126 (ENSDLEG00000019156) ANGPTL5 (ENSDLEG00000019199) TRPC6 (ENSDLEG00000019215) ENSDLEG00000019251 PGR (ENSDLEG00000019262) ARHGAP42 (ENSDLEG00000019294) ENSDLEG00000019322 ENSDLEG00000019330 ENSDLEG00000019332 JRKL (ENSDLEG00000019346) CCDC82 (ENSDLEG00000019354) ENSDLEG00000019362 ##22 ENSDLEG00000019364 ##22 MTMR2 (ENSDLEG00000008099) CEP57 (ENSDLEG00000008152) FAM76B (ENSDLEG00000008194) SESN3 (ENSDLEG00000008313) ENDOD1 (ENSDLEG00000008365) CWC15 (ENSDLEG00000008381) AMOTL1 (ENSDLEG00000008425) PIWIL4 (ENSDLEG00000008525) FUT4 (ENSDLEG00000008615) ANKRD49 (ENSDLEG00000008640) MRE11 (ENSDLEG00000008671) GPR83 (ENSDLEG00000008769) IZUMO1R (ENSDLEG00000008834) PANX1 (ENSDLEG00000009144) HEPHL1 (ENSDLEG00000009188) Narwhal MODERN SPECIES 314 MMP7 (ENSMMNG00015017833) TMEM123 (ENSMMNG00015017867) ENSMMNG00015017889 BIRC2 (ENSMMNG00015017921) BIRC3 (ENSMMNG00015017985) YAP1 (ENSMMNG00015018068) CFAP300 (ENSMMNG00015018205) CEP126 (ENSMMNG00015018271) ANGPTL5 (ENSMMNG00015018291) TRPC6 (ENSMMNG00015018388) PGR (ENSMMNG00015018676) ARHGAP42 (ENSMMNG00015018844) CNTN5 (ENSMMNG00015018995) JRKL (ENSMMNG00015019272) CCDC82 (ENSMMNG00015019297) MAML2 (ENSMMNG00015019358) ##22 MTMR2 (ENSMMNG00015019396) CEP57 (ENSMMNG00015019470) FAM76B (ENSMMNG00015019558) SESN3 (ENSMMNG00015019600) ENDOD1 (ENSMMNG00015019650) ENSMMNG00015019662 ENSMMNG00015019674 AMOTL1 (ENSMMNG00015019700) PIWIL4 (ENSMMNG00015019794) FUT4 (ENSMMNG00015019851) ANKRD49 (ENSMMNG00015019870) MRE11 (ENSMMNG00015019911) GPR83 (ENSMMNG00015020020) IZUMO1R (ENSMMNG00015020047) PANX1 (ENSMMNG00015020072) Vaquita MODERN SPECIES 19 TMEM123 (ENSPSNG00000013055) ENSPSNG00000013115 BIRC2 (ENSPSNG00000013192) BIRC3 (ENSPSNG00000013270) YAP1 (ENSPSNG00000013360) CFAP300 (ENSPSNG00000013652) CEP126 (ENSPSNG00000013968) ANGPTL5 (ENSPSNG00000014015) TRPC6 (ENSPSNG00000014185) ENSPSNG00000014410 PGR (ENSPSNG00000014472) ARHGAP42 (ENSPSNG00000009766) CNTN5 (ENSPSNG00000010146) JRKL (ENSPSNG00000011075) CCDC82 (ENSPSNG00000011116) MAML2 (ENSPSNG00000011258) ##22 ENSPSNG00000011365 CEP57 (ENSPSNG00000011486) FAM76B (ENSPSNG00000011736) SESN3 (ENSPSNG00000011827) ENDOD1 (ENSPSNG00000012066) ENSPSNG00000012161 ENSPSNG00000012220 ENSPSNG00000012253 AMOTL1 (ENSPSNG00000012299) PIWIL4 (ENSPSNG00000012478) ENSPSNG00000012714 ANKRD49 (ENSPSNG00000012741) MRE11 (ENSPSNG00000012783) GPR83 (ENSPSNG00000013087) IZUMO1R (ENSPSNG00000013201) Dolphin MODERN SPECIES 4063 MAML2 (ENSTTRG00000012909) ##22 Camelidae ANCESTRAL SPECIES 32 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Arabian camel DUPLICATION Arabian camel MODERN SPECIES 1 BIRC3 (ENSCDRG00005001220) YAP1 (ENSCDRG00005001090) CFAP300 (ENSCDRG00005001024) CEP126 (ENSCDRG00005000987) ANGPTL5 (ENSCDRG00005000957) ENSCDRG00005000933 TRPC6 (ENSCDRG00005000413) PGR (ENSCDRG00005000147) ARHGAP42 (ENSCDRG00005017619) ENSCDRG00005017534 CNTN5 (ENSCDRG00005017083) ENSCDRG00005017020 JRKL (ENSCDRG00005017005) CCDC82 (ENSCDRG00005016974) ENSCDRG00005016961 ##22 ENSCDRG00005016889 ##22 MTMR2 (ENSCDRG00005016764) CEP57 (ENSCDRG00005016540) FAM76B (ENSCDRG00005016457) SESN3 (ENSCDRG00005016152) ENSCDRG00005016090 ENSCDRG00005016007 ENSCDRG00005015979 CWC15 (ENSCDRG00005015943) AMOTL1 (ENSCDRG00005015718) PIWIL4 (ENSCDRG00005015533) FUT4 (ENSCDRG00005015443) C11orf97 (ENSCDRG00005015394) ANKRD49 (ENSCDRG00005015366) MRE11 (ENSCDRG00005014968) GPR83 (ENSCDRG00005014899) Arabian camel MODERN SPECIES 1 BIRC2 (ENSCDRG00005001258) BIRC3 (ENSCDRG00005001220) YAP1 (ENSCDRG00005001090) CFAP300 (ENSCDRG00005001024) CEP126 (ENSCDRG00005000987) ANGPTL5 (ENSCDRG00005000957) ENSCDRG00005000933 TRPC6 (ENSCDRG00005000413) PGR (ENSCDRG00005000147) ARHGAP42 (ENSCDRG00005017619) ENSCDRG00005017534 CNTN5 (ENSCDRG00005017083) ENSCDRG00005017020 JRKL (ENSCDRG00005017005) CCDC82 (ENSCDRG00005016974) ENSCDRG00005016961 ##22 ENSCDRG00005016889 ##22 MTMR2 (ENSCDRG00005016764) CEP57 (ENSCDRG00005016540) FAM76B (ENSCDRG00005016457) SESN3 (ENSCDRG00005016152) ENSCDRG00005016090 ENSCDRG00005016007 ENSCDRG00005015979 CWC15 (ENSCDRG00005015943) AMOTL1 (ENSCDRG00005015718) PIWIL4 (ENSCDRG00005015533) FUT4 (ENSCDRG00005015443) C11orf97 (ENSCDRG00005015394) ANKRD49 (ENSCDRG00005015366) MRE11 (ENSCDRG00005014968) Alpaca MODERN SPECIES 2510 JRKL (ENSVPAG00000008344) CCDC82 (ENSVPAG00000008341) MAML2 (ENSVPAG00000008339) ##22 MTMR2 (ENSVPAG00000008336) CEP57 (ENSVPAG00000008333) FAM76B (ENSVPAG00000008323) Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00910000147289 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Carnivora ANCESTRAL SPECIES 21 ENSGT00940000155900 ENSGT00940000156937 ENSGT00940000153566.b ENSGT00950000183064.a.b.a ENSGT00390000013297 ENSGT00940000157590 ENSGT00950000182942.b.a.b ENSGT00950000182942.b.a.a ENSGT00950000182942.b.b ENSGT00940000157165 ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00910000147289 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Felidae ANCESTRAL SPECIES ENSGT00940000156937 ENSGT00940000153566.b ENSGT00950000183064.a.b.a ENSGT00390000013297 ENSGT00940000157590 ENSGT00950000182942.b.a.b ENSGT00950000182942.b.a.a ENSGT00950000182942.b.b ENSGT00940000157165 ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000153446.b.d ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.t ENSGT00940000162152.s ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Panthera ANCESTRAL SPECIES 23 ENSGT00940000156937 ENSGT00940000153566.b ENSGT00950000183064.a.b.a ENSGT00390000013297 ENSGT00940000157590 ENSGT00950000182942.b.a.b ENSGT00950000182942.b.a.a ENSGT00950000182942.b.b ENSGT00940000157165 ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000153446.b.d ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.s ENSGT00390000012084.y.b ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Tiger MODERN SPECIES 123 ENSPTIG00000006982 ENSPTIG00000006956 ENSPTIG00000006712 JRKL (ENSPTIG00000010065) CCDC82 (ENSPTIG00000006366) MAML2 (ENSPTIG00000005913) ##22 MTMR2 (ENSPTIG00000005248) CEP57 (ENSPTIG00000002807) FAM76B (ENSPTIG00000000581) SESN3 (ENSPTIG00000000066) ENDOD1 (ENSPTIG00000021253) KDM4D (ENSPTIG00000021192) ENSPTIG00000021149 AMOTL1 (ENSPTIG00000021027) PIWIL4 (ENSPTIG00000020931) C11orf97 (ENSPTIG00000020857) ANKRD49 (ENSPTIG00000020842) MRE11 (ENSPTIG00000020482) GPR83 (ENSPTIG00000020384) IZUMO1R (ENSPTIG00000020317) PANX1 (ENSPTIG00000020245) Panthera_a ANCESTRAL SPECIES 24 ENSGT00940000153566.b ENSGT00950000183064.a.b.a ENSGT00390000013297 ENSGT00940000157590 ENSGT00950000182942.b.a.b ENSGT00950000182942.b.a.a ENSGT00950000182942.b.b ENSGT00940000157165 ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000153446.b.d ENSGT00390000003897.s.b.a.b.a.a ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.s.a ENSGT00390000012084.y.a.a ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j leopard MODERN SPECIES 17 PGR (ENSPPRG00000017879) ARHGAP42 (ENSPPRG00000021497) CNTN5 (ENSPPRG00000023167) ENSPPRG00000022878 ENSPPRG00000014839 JRKL (ENSPPRG00000014847) CCDC82 (ENSPPRG00000000337) MAML2 (ENSPPRG00000000602) ##22 MTMR2 (ENSPPRG00000002100) CEP57 (ENSPPRG00000003241) FAM76B (ENSPPRG00000003510) SESN3 (ENSPPRG00000003990) ENSPPRG00000004139 ENSPPRG00000004151 ENSPPRG00000014900 ENSPPRG00000014906 ENSPPRG00000014918 ENSPPRG00000005063 AMOTL1 (ENSPPRG00000007186) PIWIL4 (ENSPPRG00000007432) FUT4 (ENSPPRG00000014970) C11orf97 (ENSPPRG00000007748) ANKRD49 (ENSPPRG00000008157) lion MODERN SPECIES 10 NCAPD3 (ENSPLOG00000013783) VPS26B (ENSPLOG00000013860) THYN1 (ENSPLOG00000013910) ACAD8 (ENSPLOG00000014088) ENSPLOG00000014293 GLB1L3 (ENSPLOG00000014476) GLB1L2 (ENSPLOG00000014685) B3GAT1 (ENSPLOG00000014881) PGR (ENSPLOG00000014975) ARHGAP42 (ENSPLOG00000015316) CNTN5 (ENSPLOG00000015817) ENSPLOG00000016751 ENSPLOG00000016802 JRKL (ENSPLOG00000016824) CCDC82 (ENSPLOG00000016852) MAML2 (ENSPLOG00000016912) ##22 MTMR2 (ENSPLOG00000016998) CEP57 (ENSPLOG00000017062) FAM76B (ENSPLOG00000017383) SESN3 (ENSPLOG00000017658) ENDOD1 (ENSPLOG00000017790) KDM4D (ENSPLOG00000017815) ENSPLOG00000017871 AMOTL1 (ENSPLOG00000017940) PIWIL4 (ENSPLOG00000018141) FUT4 (ENSPLOG00000010997) C11orf97 (ENSPLOG00000011026) ANKRD49 (ENSPLOG00000011102) MRE11 (ENSPLOG00000011192) GPR83 (ENSPLOG00000011474) IZUMO1R (ENSPLOG00000011548) Cat MODERN SPECIES 241 VPS26B (ENSFCAG00000007418) THYN1 (ENSFCAG00000007419) ACAD8 (ENSFCAG00000007420) ENSFCAG00000048577 ENSFCAG00000045417 GLB1L2 (ENSFCAG00000013738) B3GAT1 (ENSFCAG00000013741) ENSFCAG00000044711 PGR (ENSFCAG00000041663) ARHGAP42 (ENSFCAG00000022220) CNTN5 (ENSFCAG00000013908) ENSFCAG00000052818 ENSFCAG00000048190 JRKL (ENSFCAG00000007462) CCDC82 (ENSFCAG00000027555) MAML2 (ENSFCAG00000012287) ##22 MTMR2 (ENSFCAG00000030514) CEP57 (ENSFCAG00000025537) FAM76B (ENSFCAG00000026051) SESN3 (ENSFCAG00000005081) ENDOD1 (ENSFCAG00000005079) ENSFCAG00000043892 ENSFCAG00000045743 CWC15 (ENSFCAG00000007826) AMOTL1 (ENSFCAG00000010915) PIWIL4 (ENSFCAG00000010914) FUT4 (ENSFCAG00000029438) CD1H11orf97 (ENSFCAG00000036846) ANKRD49 (ENSFCAG00000042246) MRE11 (ENSFCAG00000025219) GPR83 (ENSFCAG00000010910) Caniformia ANCESTRAL SPECIES 17 ENSGT00940000155900 ENSGT00940000156937 ENSGT00940000153566.b ENSGT00950000183064.a.b.a ENSGT00390000013297 ENSGT00940000157590 ENSGT00950000182942.b.a.b ENSGT00950000182942.b.a.a ENSGT00950000182942.b.b ENSGT00940000157165 ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823.b ENSGT00910000147289 ENSGT00520000058823.a ENSGT00390000003919 ENSGT00390000017288 Canidae ANCESTRAL SPECIES 17 ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823.b ENSGT00910000147289 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Red fox DUPLICATION Red fox MODERN SPECIES 12 ENSVVUG00000012771 ENSVVUG00000012768 ARHGAP42 (ENSVVUG00000011940) ENSVVUG00000011935 CNTN5 (ENSVVUG00000011837) ENSVVUG00000011800 JRKL (ENSVVUG00000011782) CCDC82 (ENSVVUG00000011778) ENSVVUG00000011776 ##22 ENSVVUG00000011774 ENSVVUG00000011770 ##22 MTMR2 (ENSVVUG00000011747) ENSVVUG00000011726 FAM76B (ENSVVUG00000011705) SESN3 (ENSVVUG00000011684) ENDOD1 (ENSVVUG00000011659) KDM4D (ENSVVUG00000011656) ENSVVUG00000011648 ENSVVUG00000011644 AMOTL1 (ENSVVUG00000011602) PIWIL4 (ENSVVUG00000011577) FUT4 (ENSVVUG00000011573) ENSVVUG00000011567 ENSVVUG00000011564 ANKRD49 (ENSVVUG00000011561) MRE11 (ENSVVUG00000011537) Red fox MODERN SPECIES 12 ENSVVUG00000012771 ENSVVUG00000012768 ARHGAP42 (ENSVVUG00000011940) ENSVVUG00000011935 CNTN5 (ENSVVUG00000011837) ENSVVUG00000011800 JRKL (ENSVVUG00000011782) CCDC82 (ENSVVUG00000011778) ENSVVUG00000011776 ##22 ENSVVUG00000011774 ENSVVUG00000011770 ##22 MTMR2 (ENSVVUG00000011747) ENSVVUG00000011726 FAM76B (ENSVVUG00000011705) SESN3 (ENSVVUG00000011684) ENDOD1 (ENSVVUG00000011659) KDM4D (ENSVVUG00000011656) ENSVVUG00000011648 ENSVVUG00000011644 AMOTL1 (ENSVVUG00000011602) PIWIL4 (ENSVVUG00000011577) FUT4 (ENSVVUG00000011573) ENSVVUG00000011567 ENSVVUG00000011564 Canis_lupus ANCESTRAL SPECIES 21 ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000003477.n ENSGT00940000158183 ENSGT00940000161257.f ENSGT01100000265450 ENSGT00940000154900.cb.b ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00940000162213.a.a.c.a.a ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.z ENSGT00940000162152.y ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823.b ENSGT00910000147289 ENSGT00390000003919 Dog MODERN SPECIES 13 PGR (ENSCAFG00845015739) ENSCAFG00845015949 ENSCAFG00845016310 ENSCAFG00845016498 ENSCAFG00845016836 ENSCAFG00845017020 ENSCAFG00845017193 JRKL (ENSCAFG00845017252) CCDC82 (ENSCAFG00845017278) MAML2 (ENSCAFG00845017403) ##22 MTMR2 (ENSCAFG00845017531) CEP57 (ENSCAFG00845017787) FAM76B (ENSCAFG00845018160) ENSCAFG00845018846 SESN3 (ENSCAFG00845018942) ENDOD1 (ENSCAFG00845019180) ENSCAFG00845019240 ENSCAFG00845019286 CWC15 (ENSCAFG00845019309) AMOTL1 (ENSCAFG00845019406) PIWIL4 (ENSCAFG00845019963) FUT4 (ENSCAFG00845020086) ENSCAFG00845020114 ENSCAFG00845020169 ANKRD49 (ENSCAFG00845020201) Dingo DUPLICATION Dingo MODERN SPECIES 245 ENSCAFG00020016048 JRKL (ENSCAFG00020016050) CCDC82 (ENSCAFG00020016052) ENSCAFG00020016054 ##22 MAML2 (ENSCAFG00020016057) ##22 MTMR2 (ENSCAFG00020016062) CEP57 (ENSCAFG00020016478) FAM76B (ENSCAFG00020016484) ENSCAFG00020016489 ENSCAFG00020016496 ENSCAFG00020016504 ENSCAFG00020016506 ENSCAFG00020016510 ENSCAFG00020016513 CWC15 (ENSCAFG00020016515) AMOTL1 (ENSCAFG00020016518) PIWIL4 (ENSCAFG00020016521) FUT4 (ENSCAFG00020016526) ANKRD49 (ENSCAFG00020016528) Dingo MODERN SPECIES 245 ENSCAFG00020016048 JRKL (ENSCAFG00020016050) CCDC82 (ENSCAFG00020016052) ENSCAFG00020016054 ##22 MAML2 (ENSCAFG00020016057) ##22 MTMR2 (ENSCAFG00020016062) CEP57 (ENSCAFG00020016478) FAM76B (ENSCAFG00020016484) ENSCAFG00020016489 ENSCAFG00020016496 ENSCAFG00020016504 ENSCAFG00020016506 ENSCAFG00020016510 ENSCAFG00020016513 CWC15 (ENSCAFG00020016515) AMOTL1 (ENSCAFG00020016518) PIWIL4 (ENSCAFG00020016521) FUT4 (ENSCAFG00020016526) ANKRD49 (ENSCAFG00020016528) ENSCAFG00020016530 Caniformia_b ANCESTRAL SPECIES 3 ENSGT00940000155900 ENSGT00940000156937 ENSGT00940000153566.b ENSGT00950000183064.a.b.a ENSGT00390000013297 ENSGT00940000157590 ENSGT00950000182942.b.a.b ENSGT00950000182942.b.a.a ENSGT00950000182942.b.b ENSGT00940000157165 ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823.a ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Mustelinae ANCESTRAL SPECIES 25 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823.a ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Ferret MODERN SPECIES 207 ENSMPUG00000012379 ENSMPUG00000012371 ENSMPUG00000012369 ENSMPUG00000012359 ENSMPUG00000012348 ENSMPUG00000012316 JRKL (ENSMPUG00000012306) CCDC82 (ENSMPUG00000012300) MAML2 (ENSMPUG00000012297) ##22 MTMR2 (ENSMPUG00000012291) CEP57 (ENSMPUG00000012287) FAM76B (ENSMPUG00000012280) ENSMPUG00000012279 SESN3 (ENSMPUG00000012272) ENSMPUG00000012270 KDM4D (ENSMPUG00000012267) CWC15 (ENSMPUG00000012265) AMOTL1 (ENSMPUG00000012261) PIWIL4 (ENSMPUG00000012256) FUT4 (ENSMPUG00000019345) ENSMPUG00000012255 ANKRD49 (ENSMPUG00000012252) MRE11 (ENSMPUG00000012250) GPR83 (ENSMPUG00000012244) American mink MODERN SPECIES 6 JRKL (ENSNVIG00000006095) CCDC82 (ENSNVIG00000005993) MAML2 (ENSNVIG00000005971) ##22 MTMR2 (ENSNVIG00000005888) CEP57 (ENSNVIG00000005774) FAM76B (ENSNVIG00000005739) SESN3 (ENSNVIG00000005698) ENDOD1 (ENSNVIG00000005691) ENSNVIG00000005674 ENSNVIG00000005671 CWC15 (ENSNVIG00000005664) AMOTL1 (ENSNVIG00000005602) PIWIL4 (ENSNVIG00000005560) FUT4 (ENSNVIG00000005553) C11orf97 (ENSNVIG00000005537) ANKRD49 (ENSNVIG00000005521) MRE11 (ENSNVIG00000005415) GPR83 (ENSNVIG00000005397) Ursidae ANCESTRAL SPECIES 15 ENSGT00940000155900 ENSGT00940000156937 ENSGT00940000153566.b ENSGT00950000183064.a.b.a ENSGT00390000013297 ENSGT00940000157590 ENSGT00950000182942.b.a.b ENSGT00950000182942.b.a.a ENSGT00950000182942.b.b ENSGT00940000157165 ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.u ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823.a ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Giant Panda MODERN SPECIES 18 IGSF9B (ENSAMEG00000007065) JAM3 (ENSAMEG00000007109) NCAPD3 (ENSAMEG00000007193) ENSAMEG00000007275 ENSAMEG00000007294 ENSAMEG00000007367 GLB1L3 (ENSAMEG00000007400) GLB1L2 (ENSAMEG00000007409) ENSAMEG00000007465 ENSAMEG00000023980 ENSAMEG00000017449 ARHGAP42 (ENSAMEG00000014849) CNTN5 (ENSAMEG00000003430) JRKL (ENSAMEG00000007961) CCDC82 (ENSAMEG00000007964) MAML2 (ENSAMEG00000007988) ##22 MTMR2 (ENSAMEG00000007994) CEP57 (ENSAMEG00000008024) FAM76B (ENSAMEG00000008044) SESN3 (ENSAMEG00000011413) ENDOD1 (ENSAMEG00000019907) ENSAMEG00000027198 ENSAMEG00000025796 CWC15 (ENSAMEG00000011392) AMOTL1 (ENSAMEG00000011381) ENSAMEG00000001911 PIWIL4 (ENSAMEG00000007580) FUT4 (ENSAMEG00000007616) C11orf97 (ENSAMEG00000024321) ANKRD49 (ENSAMEG00000028517) MRE11 (ENSAMEG00000007626) Ursus ANCESTRAL SPECIES 157 ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.u.b ENSGT00940000162152.u.a.a ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Polar bear DUPLICATION Polar bear MODERN SPECIES 149 ENSUMAG00000008510 ENSUMAG00000008495 ARHGAP42 (ENSUMAG00000008322) ENSUMAG00000008293 CNTN5 (ENSUMAG00000008194) ENSUMAG00000008130 JRKL (ENSUMAG00000008102) CCDC82 (ENSUMAG00000008097) ENSUMAG00000008084 ##22 ENSUMAG00000008078 ##22 MTMR2 (ENSUMAG00000007301) CEP57 (ENSUMAG00000007244) FAM76B (ENSUMAG00000007226) SESN3 (ENSUMAG00000007186) ENDOD1 (ENSUMAG00000007178) ENSUMAG00000007175 ENSUMAG00000007170 CWC15 (ENSUMAG00000007161) AMOTL1 (ENSUMAG00000007154) PIWIL4 (ENSUMAG00000007117) ANKRD49 (ENSUMAG00000007092) MRE11 (ENSUMAG00000007075) GPR83 (ENSUMAG00000007059) IZUMO1R (ENSUMAG00000006944) Polar bear MODERN SPECIES 149 ENSUMAG00000008510 ENSUMAG00000008495 ARHGAP42 (ENSUMAG00000008322) ENSUMAG00000008293 CNTN5 (ENSUMAG00000008194) ENSUMAG00000008130 JRKL (ENSUMAG00000008102) CCDC82 (ENSUMAG00000008097) ENSUMAG00000008084 ##22 ENSUMAG00000008078 ##22 MTMR2 (ENSUMAG00000007301) CEP57 (ENSUMAG00000007244) FAM76B (ENSUMAG00000007226) SESN3 (ENSUMAG00000007186) ENDOD1 (ENSUMAG00000007178) ENSUMAG00000007175 ENSUMAG00000007170 CWC15 (ENSUMAG00000007161) AMOTL1 (ENSUMAG00000007154) PIWIL4 (ENSUMAG00000007117) ANKRD49 (ENSUMAG00000007092) MRE11 (ENSUMAG00000007075) GPR83 (ENSUMAG00000007059) IZUMO1R (ENSUMAG00000006944) PANX1 (ENSUMAG00000006930) American black bear DUPLICATION American black bear MODERN SPECIES 4847 JRKL (ENSUAMG00000027617) ENSUAMG00000027618 ENSUAMG00000027620 ##22 American black bear MODERN SPECIES 5704 ENSUAMG00000003283 ##22 ENSUAMG00000003285 Laurasiatheria_c ANCESTRAL SPECIES 23 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Equus ANCESTRAL SPECIES 25 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT01010000229305 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.ab ENSGT00940000162152.`b ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Donkey MODERN SPECIES 12 BIRC2 (ENSEASG00005011141) BIRC3 (ENSEASG00005011145) YAP1 (ENSEASG00005011146) CFAP300 (ENSEASG00005031746) CEP126 (ENSEASG00005011151) ANGPTL5 (ENSEASG00005011153) TRPC6 (ENSEASG00005011159) PGR (ENSEASG00005011167) ARHGAP42 (ENSEASG00005011181) CNTN5 (ENSEASG00005011200) ENSEASG00005011203 ENSEASG00005011207 ENSEASG00005011209 JRKL (ENSEASG00005035447) CCDC82 (ENSEASG00005011214) MAML2 (ENSEASG00005011221) ##22 ENSEASG00005036655 MTMR2 (ENSEASG00005011224) CEP57 (ENSEASG00005011227) FAM76B (ENSEASG00005011231) SESN3 (ENSEASG00005011270) ENDOD1 (ENSEASG00005028824) ENSEASG00005011277 ENSEASG00005028515 CWC15 (ENSEASG00005011279) AMOTL1 (ENSEASG00005011287) PIWIL4 (ENSEASG00005027983) FUT4 (ENSEASG00005011312) C11orf97 (ENSEASG00005011314) ANKRD49 (ENSEASG00005032651) MRE11 (ENSEASG00005011342) Horse MODERN SPECIES 28 BIRC3 (ENSECAG00000047232) ENSECAG00000054274 YAP1 (ENSECAG00000008660) CFAP300 (ENSECAG00000008152) CEP126 (ENSECAG00000000666) ANGPTL5 (ENSECAG00000021029) TRPC6 (ENSECAG00000023421) PGR (ENSECAG00000011511) ARHGAP42 (ENSECAG00000005829) CNTN5 (ENSECAG00000000340) ENSECAG00000037608 ENSECAG00000021004 ENSECAG00000052632 JRKL (ENSECAG00000001856) CCDC82 (ENSECAG00000018064) MAML2 (ENSECAG00000014537) ##22 MTMR2 (ENSECAG00000018921) CEP57 (ENSECAG00000010938) FAM76B (ENSECAG00000005330) SESN3 (ENSECAG00000017743) ENSECAG00000030703 ENDOD1 (ENSECAG00000017667) ENSECAG00000036765 ENSECAG00000057140 CWC15 (ENSECAG00000013314) AMOTL1 (ENSECAG00000012681) FUT4 (ENSECAG00000024199) PIWIL4 (ENSECAG00000024385) ANKRD49 (ENSECAG00000024188) MRE11 (ENSECAG00000000295) GPR83 (ENSECAG00000020552) Chiroptera ANCESTRAL SPECIES 33 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Megabat MODERN SPECIES 3109 MAML2 (ENSPVAG00000005721) ##22 MTMR2 (ENSPVAG00000005719) CEP57 (ENSPVAG00000005717) FAM76B (ENSPVAG00000005713) Microchiroptera ANCESTRAL SPECIES 34 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Greater horseshoe bat MODERN SPECIES 2 BIRC2 (ENSRFEG00010006459) BIRC3 (ENSRFEG00010006379) ENSRFEG00010006344 YAP1 (ENSRFEG00010006175) CFAP300 (ENSRFEG00010006073) CEP126 (ENSRFEG00010005996) ANGPTL5 (ENSRFEG00010005960) TRPC6 (ENSRFEG00010021416) PGR (ENSRFEG00010021367) ENSRFEG00010021353 ARHGAP42 (ENSRFEG00010021297) CNTN5 (ENSRFEG00010021161) ENSRFEG00010021116 JRKL (ENSRFEG00010021090) CCDC82 (ENSRFEG00010021069) MAML2 (ENSRFEG00010021043) ##22 MTMR2 (ENSRFEG00010021018) CEP57 (ENSRFEG00010020926) FAM76B (ENSRFEG00010020857) SESN3 (ENSRFEG00010020812) ENDOD1 (ENSRFEG00010020792) ENSRFEG00010020772 ENSRFEG00010020755 CWC15 (ENSRFEG00010020742) AMOTL1 (ENSRFEG00010020674) PIWIL4 (ENSRFEG00010020425) FUT4 (ENSRFEG00010020392) C11orf97 (ENSRFEG00010020369) ANKRD49 (ENSRFEG00010020343) MRE11 (ENSRFEG00010020173) GPR83 (ENSRFEG00010020113) Microbat MODERN SPECIES 1156 JRKL (ENSMLUG00000025663) CCDC82 (ENSMLUG00000008655) MAML2 (ENSMLUG00000008638) ##22 ENSMLUG00000013626 Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00530000063929.b ENSGT00940000154175.j ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00910000147289 ENSGT00390000003919 ENSGT00390000017288 Primates ANCESTRAL SPECIES ENSGT00940000160903 ENSGT00530000063929.b ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00910000147289 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Haplorrhini ANCESTRAL SPECIES ENSGT00940000160903 ENSGT00530000063929.b ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00910000147289 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Simiiformes ANCESTRAL SPECIES ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT00390000000537.e ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000010045.g.a ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a ENSGT00940000165078 ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00910000147289 Platyrrhini ANCESTRAL SPECIES 3 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT00390000000537.e ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000010045.g.a ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a ENSGT00940000165078 ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 Cebidae ANCESTRAL SPECIES ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT00390000000537.e ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a ENSGT00940000165078 ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158.e.a ENSGT00940000160158.e.b ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 Cebidae_a ANCESTRAL SPECIES 22 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT00390000000537.e.b ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a ENSGT00940000165078 ENSGT00390000012084.o ENSGT00940000160158.e.a Bolivian squirrel monkey MODERN SPECIES 50 YAP1 (ENSSBOG00000027497) ENSSBOG00000036077 CFAP300 (ENSSBOG00000033758) CEP126 (ENSSBOG00000028647) ANGPTL5 (ENSSBOG00000031015) ENSSBOG00000032893 TRPC6 (ENSSBOG00000019836) ENSSBOG00000021319 ENSSBOG00000023108 ENSSBOG00000023277 PGR (ENSSBOG00000013714) ARHGAP42 (ENSSBOG00000035822) CNTN5 (ENSSBOG00000023228) ENSSBOG00000018311 CCDC82 (ENSSBOG00000027897) MAML2 (ENSSBOG00000031458) ##22 MTMR2 (ENSSBOG00000012973) CEP57 (ENSSBOG00000030610) FAM76B (ENSSBOG00000017588) Capuchin MODERN SPECIES 336 ENSCCAG00000019622 CCDC82 (ENSCCAG00000006142) ENSCCAG00000020935 MAML2 (ENSCCAG00000027721) ##22 MTMR2 (ENSCCAG00000035373) CEP57 (ENSCCAG00000023614) FAM76B (ENSCCAG00000023682) SESN3 (ENSCCAG00000031002) ENDOD1 (ENSCCAG00000036865) SRSF8 (ENSCCAG00000022864) ENSCCAG00000027439 CWC15 (ENSCCAG00000026289) ENSCCAG00000033319 Marmoset MODERN SPECIES 2 ENSCJAG00000058230 PGR (ENSCJAG00000000583) ARHGAP42 (ENSCJAG00000000566) ENSCJAG00000023196 ENSCJAG00000073241 CNTN5 (ENSCJAG00000000543) ENSCJAG00000078589 ENSCJAG00000068576 ENSCJAG00000073640 ENSCJAG00000023377 ENSCJAG00000074342 ENSCJAG00000074166 ENSCJAG00000069774 JRKL (ENSCJAG00000043270) CCDC82 (ENSCJAG00000004365) MAML2 (ENSCJAG00000004359) ##22 MTMR2 (ENSCJAG00000004327) CEP57 (ENSCJAG00000004281) FAM76B (ENSCJAG00000040122) ENSCJAG00000004220 ENDOD1 (ENSCJAG00000039825) ENSCJAG00000072491 KDM4D (ENSCJAG00000023319) CWC15 (ENSCJAG00000040352) AMOTL1 (ENSCJAG00000004124) ENSCJAG00000070716 ENSCJAG00000065220 PIWIL4 (ENSCJAG00000004075) FUT4 (ENSCJAG00000074794) C11orf97 (ENSCJAG00000087393) ANKRD49 (ENSCJAG00000083691) Mas night monkey MODERN SPECIES 278 TMEM123 (ENSANAG00000029026) BIRC2 (ENSANAG00000037030) BIRC3 (ENSANAG00000035989) ENSANAG00000022618 YAP1 (ENSANAG00000029463) CFAP300 (ENSANAG00000023658) CEP126 (ENSANAG00000033095) ANGPTL5 (ENSANAG00000025830) TRPC6 (ENSANAG00000032595) PGR (ENSANAG00000036519) ARHGAP42 (ENSANAG00000033530) ENSANAG00000026824 CNTN5 (ENSANAG00000024170) ENSANAG00000022382 CCDC82 (ENSANAG00000025591) MAML2 (ENSANAG00000022462) ##22 MTMR2 (ENSANAG00000028178) CEP57 (ENSANAG00000033666) FAM76B (ENSANAG00000027519) SESN3 (ENSANAG00000032229) ENSANAG00000031662 ENDOD1 (ENSANAG00000036222) SRSF8 (ENSANAG00000031642) ENSANAG00000022615 CWC15 (ENSANAG00000020484) Catarrhini ANCESTRAL SPECIES 1 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT00390000000537.e ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000010045.g.a ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000154883.g.a.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 Cercopithecidae ANCESTRAL SPECIES ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000010045.g.a ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000154883.g.a.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000010045.g.a ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000154883.g.a.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 Vervet Monkey MODERN SPECIES MMP20 (ENSCSAG00000003216) MMP7 (ENSCSAG00000003219) TMEM123 (ENSCSAG00000003220) BIRC3 (ENSCSAG00000003222) YAP1 (ENSCSAG00000003224) CFAP300 (ENSCSAG00000003227) CEP126 (ENSCSAG00000003230) ANGPTL5 (ENSCSAG00000003234) TRPC6 (ENSCSAG00000003254) PGR (ENSCSAG00000003260) ARHGAP42 (ENSCSAG00000003267) ENSCSAG00000003271 CNTN5 (ENSCSAG00000003274) JRKL (ENSCSAG00000000606) CCDC82 (ENSCSAG00000003276) MAML2 (ENSCSAG00000003277) ##22 MTMR2 (ENSCSAG00000003280) CEP57 (ENSCSAG00000003283) FAM76B (ENSCSAG00000003286) SESN3 (ENSCSAG00000003288) ENDOD1 (ENSCSAG00000003290) KDM4E (ENSCSAG00000003292) KDM4D (ENSCSAG00000003295) CWC15 (ENSCSAG00000003299) AMOTL1 (ENSCSAG00000003315) PIWIL4 (ENSCSAG00000003360) FUT4 (ENSCSAG00000000607) C11orf97 (ENSCSAG00000003377) ANKRD49 (ENSCSAG00000003379) MRE11 (ENSCSAG00000003391) GPR83 (ENSCSAG00000003397) Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000010045.g.a ENSGT00940000155492.a.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00860000135858 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000154883.g.a.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 Cercopithecinae_b ANCESTRAL SPECIES 21 ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000010045.g.a ENSGT00940000158183 ENSGT00940000161513 ENSGT00860000135858 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 Olive baboon MODERN SPECIES 3 YAP1 (ENSPANG00000007466) ENSPANG00000047316 CEP126 (ENSPANG00000005405) ANGPTL5 (ENSPANG00000024283) TRPC6 (ENSPANG00000015044) PGR (ENSPANG00000010677) ARHGAP42 (ENSPANG00000015327) ENSPANG00000048576 CNTN5 (ENSPANG00000008340) ENSPANG00000039316 ENSPANG00000044716 ENSPANG00000047988 ENSPANG00000051283 JRKL (ENSPANG00000003755) CCDC82 (ENSPANG00000020671) MAML2 (ENSPANG00000004951) ##22 ENSPANG00000044338 MTMR2 (ENSPANG00000012250) CEP57 (ENSPANG00000003973) FAM76B (ENSPANG00000006473) SESN3 (ENSPANG00000012747) ENDOD1 (ENSPANG00000009553) SRSF8 (ENSPANG00000032291) KDM4F (ENSPANG00000038422) KDM4E (ENSPANG00000047397) KDM4D (ENSPANG00000000063) CWC15 (ENSPANG00000019125) AMOTL1 (ENSPANG00000018871) PIWIL4 (ENSPANG00000016066) ENSPANG00000046304 FUT4 (ENSPANG00000051031) Cercopithecinae_d ANCESTRAL SPECIES 45 ENSGT00910000147719 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00390000010045.g.a ENSGT00940000158183 ENSGT00940000161513 ENSGT00860000135858 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000154883.g.a.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 Sooty mangabey MODERN SPECIES 172 ENSCATG00000034848 BIRC2 (ENSCATG00000039366) BIRC3 (ENSCATG00000025833) YAP1 (ENSCATG00000035423) CFAP300 (ENSCATG00000039694) CEP126 (ENSCATG00000028236) ANGPTL5 (ENSCATG00000042360) TRPC6 (ENSCATG00000034519) PGR (ENSCATG00000029370) ARHGAP42 (ENSCATG00000038167) ENSCATG00000033474 CNTN5 (ENSCATG00000036648) JRKL (ENSCATG00000016525) ENSCATG00000037010 CCDC82 (ENSCATG00000021333) MAML2 (ENSCATG00000034406) ##22 MTMR2 (ENSCATG00000032336) CEP57 (ENSCATG00000034084) FAM76B (ENSCATG00000014922) SESN3 (ENSCATG00000039763) ENSCATG00000015854 ENDOD1 (ENSCATG00000044441) SRSF8 (ENSCATG00000018279) ENSCATG00000020182 KDM4D (ENSCATG00000015609) CWC15 (ENSCATG00000030235) Drill MODERN SPECIES 1365 JRKL (ENSMLEG00000017227) ENSMLEG00000009269 CCDC82 (ENSMLEG00000037065) MAML2 (ENSMLEG00000036653) ##22 MTMR2 (ENSMLEG00000042985) CEP57 (ENSMLEG00000030398) FAM76B (ENSMLEG00000031982) SESN3 (ENSMLEG00000003568) ENSMLEG00000006421 ENDOD1 (ENSMLEG00000043710) ENSMLEG00000032341 KDM4E (ENSMLEG00000038416) KDM4D (ENSMLEG00000005495) CWC15 (ENSMLEG00000035668) AMOTL1 (ENSMLEG00000035114) PIWIL4 (ENSMLEG00000029752) FUT4 (ENSMLEG00000044444) C11orf97 (ENSMLEG00000033483) ENSMLEG00000043711 Macaca ANCESTRAL SPECIES 2 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000010045.g.a ENSGT00940000161513 ENSGT00860000135858 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00520000058823 ENSGT00910000147289 Macaca_a ANCESTRAL SPECIES 3 ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT01100000263493.a.b.a.b.b.b.a.a.a.a.b.b.a ENSGT01100000263493.a.b.a.a.b.b.b.b.a.b.a.a ENSGT00390000015405.s.d ENSGT00940000161513 ENSGT00860000135858 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00520000058823 ENSGT00390000003919.e ENSGT00390000017288.c Crab-eating macaque MODERN SPECIES 5 YAP1 (ENSMFAG00000037027) CEP126 (ENSMFAG00000030828) ANGPTL5 (ENSMFAG00000036602) TRPC6 (ENSMFAG00000002181) ENSMFAG00000055655 ARHGAP42 (ENSMFAG00000000533) CNTN5 (ENSMFAG00000045865) ENSMFAG00000056178 ENSMFAG00000053298 ENSMFAG00000060346 ENSMFAG00000052366 ENSMFAG00000050345 ENSMFAG00000028681 JRKL (ENSMFAG00000030353) CCDC82 (ENSMFAG00000036325) MAML2 (ENSMFAG00000031735) ##22 MTMR2 (ENSMFAG00000040303) CEP57 (ENSMFAG00000003768) FAM76B (ENSMFAG00000042981) ENSMFAG00000048059 SESN3 (ENSMFAG00000040069) ENSMFAG00000055573 ENDOD1 (ENSMFAG00000055848) KDM4F (ENSMFAG00000059067) ENSMFAG00000040102 KDM4D (ENSMFAG00000024894) CWC15 (ENSMFAG00000044052) AMOTL1 (ENSMFAG00000032749) PIWIL4 (ENSMFAG00000042631) C11orf97 (ENSMFAG00000044586) ANKRD49 (ENSMFAG00000038557) Rhesus MODERN SPECIES 5 TRPC6 (ENSMMUG00000011835) PGR (ENSMMUG00000011846) ENSMMUG00000059891 ARHGAP42 (ENSMMUG00000022603) ENSMMUG00000057177 CNTN5 (ENSMMUG00000016737) ENSMMUG00000061185 ENSMMUG00000060458 ENSMMUG00000052417 ENSMMUG00000038443 ENSMMUG00000058706 JRKL (ENSMMUG00000003821) ENSMMUG00000056501 CCDC82 (ENSMMUG00000007999) ENSMMUG00000052484 MAML2 (ENSMMUG00000014806) ##22 MTMR2 (ENSMMUG00000014801) CEP57 (ENSMMUG00000014796) FAM76B (ENSMMUG00000014792) SESN3 (ENSMMUG00000009394) ENDOD1 (ENSMMUG00000047793) SRSF8 (ENSMMUG00000007639) KDM4F (ENSMMUG00000045019) KDM4E (ENSMMUG00000059644) KDM4D (ENSMMUG00000023376) CWC15 (ENSMMUG00000044962) AMOTL1 (ENSMMUG00000001730) PIWIL4 (ENSMMUG00000008965) C14H11orf97 (ENSMMUG00000062781) ANKRD49 (ENSMMUG00000061391) MRE11 (ENSMMUG00000004112) Pig-tailed macaque MODERN SPECIES 109 ENSMNEG00000036289 CNTN5 (ENSMNEG00000043934) ENSMNEG00000035759 JRKL (ENSMNEG00000010862) CCDC82 (ENSMNEG00000036068) ENSMNEG00000033275 MAML2 (ENSMNEG00000042629) ##22 MTMR2 (ENSMNEG00000044061) CEP57 (ENSMNEG00000031755) FAM76B (ENSMNEG00000009651) SESN3 (ENSMNEG00000030326) ENSMNEG00000007007 ENDOD1 (ENSMNEG00000040186) SRSF8 (ENSMNEG00000027570) ENSMNEG00000035040 KDM4D (ENSMNEG00000026134) CWC15 (ENSMNEG00000033968) AMOTL1 (ENSMNEG00000044021) PIWIL4 (ENSMNEG00000037456) C11orf97 (ENSMNEG00000031514) ENSMNEG00000020136 ANKRD49 (ENSMNEG00000034043) Rhinopithecus ANCESTRAL SPECIES 244 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000154883.g.a.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 Black snub-nosed monkey MODERN SPECIES 695 JRKL (ENSRBIG00000029080) CCDC82 (ENSRBIG00000030883) MAML2 (ENSRBIG00000001400) ##22 MTMR2 (ENSRBIG00000028147) CEP57 (ENSRBIG00000014037) FAM76B (ENSRBIG00000006024) SESN3 (ENSRBIG00000031220) ENSRBIG00000027014 ENDOD1 (ENSRBIG00000025792) ENSRBIG00000041837 ENSRBIG00000036245 ENSRBIG00000023300 KDM4E (ENSRBIG00000035068) KDM4D (ENSRBIG00000029429) CWC15 (ENSRBIG00000030781) AMOTL1 (ENSRBIG00000043234) PIWIL4 (ENSRBIG00000039745) C11orf97 (ENSRBIG00000041747) Golden snub-nosed monkey MODERN SPECIES 1853 ENSRROG00000045222 JRKL (ENSRROG00000025782) CCDC82 (ENSRROG00000011731) MAML2 (ENSRROG00000043717) ##22 MTMR2 (ENSRROG00000043388) CEP57 (ENSRROG00000020602) FAM76B (ENSRROG00000033284) Hominoidea ANCESTRAL SPECIES 1 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT00390000000537.e ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00390000009026 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00910000147059 ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000154883.g.a.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 Hominidae ANCESTRAL SPECIES 1 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00390000009026 ENSGT00940000155492.b ENSGT00950000183087.A.a.b.b.g.e.b.a.a.a ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000154883.g.a.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 Homo/Pan/Gorilla group ANCESTRAL SPECIES 8 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00390000009026 ENSGT00940000155492.b.c ENSGT00950000183087.A.a.b.b.g.e.b.a.a.a ENSGT00940000158183 ENSGT00940000162748.g ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000154883.g.a.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 Gorilla MODERN SPECIES 2 ENSGGOG00000015908 TMEM123 (ENSGGOG00000008331) BIRC2 (ENSGGOG00000008327) BIRC3 (ENSGGOG00000005827) ENSGGOG00000005796 CFAP300 (ENSGGOG00000000989) CEP126 (ENSGGOG00000004641) ANGPTL5 (ENSGGOG00000008463) TRPC6 (ENSGGOG00000009198) PGR (ENSGGOG00000016358) ARHGAP42 (ENSGGOG00000011397) CNTN5 (ENSGGOG00000016800) ENSGGOG00000025493 JRKL (ENSGGOG00000000360) CCDC82 (ENSGGOG00000016752) MAML2 (ENSGGOG00000024120) ##22 MTMR2 (ENSGGOG00000010339) CEP57 (ENSGGOG00000013416) FAM76B (ENSGGOG00000013409) SESN3 (ENSGGOG00000004922) ENDOD1 (ENSGGOG00000024775) SRSF8 (ENSGGOG00000022679) KDM4D (ENSGGOG00000010102) CWC15 (ENSGGOG00000011926) AMOTL1 (ENSGGOG00000001033) PIWIL4 (ENSGGOG00000016276) C11orf97 (ENSGGOG00000036219) ANKRD49 (ENSGGOG00000008207) MRE11 (ENSGGOG00000008192) GPR83 (ENSGGOG00000007694) IZUMO1R (ENSGGOG00000014840) Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00390000009026 ENSGT00940000155492.b.c ENSGT00950000183087.A.a.b.b.g.e.b.a.a.a ENSGT00940000158183 ENSGT00940000162748.g ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000154883.g.a.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 Pan ANCESTRAL SPECIES 1 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00390000009026 ENSGT00940000155492.b.c ENSGT00950000183087.A.a.b.b.g.e.b.a.a.a ENSGT00940000158183 ENSGT00940000162748.g ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000154883.g.a.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 Chimpanzee MODERN SPECIES 2 BIRC3 (ENSPTRG00000004212) YAP1 (ENSPTRG00000004211) CFAP300 (ENSPTRG00000004210) CEP126 (ENSPTRG00000004209) ANGPTL5 (ENSPTRG00000004208) TRPC6 (ENSPTRG00000004207) PGR (ENSPTRG00000004206) ENSPTRG00000048308 ENSPTRG00000039214 ARHGAP42 (ENSPTRG00000004204) ENSPTRG00000045366 CNTN5 (ENSPTRG00000004201) ENSPTRG00000051433 JRKL (ENSPTRG00000028419) CCDC82 (ENSPTRG00000004198) MAML2 (ENSPTRG00000004196) ##22 MTMR2 (ENSPTRG00000004195) CEP57 (ENSPTRG00000004194) FAM76B (ENSPTRG00000004193) SESN3 (ENSPTRG00000004192) ENDOD1 (ENSPTRG00000045007) SRSF8 (ENSPTRG00000046909) KDM4F (ENSPTRG00000044159) ENSPTRG00000043643 KDM4E (ENSPTRG00000041826) KDM4D (ENSPTRG00000004190) CWC15 (ENSPTRG00000044239) AMOTL1 (ENSPTRG00000004188) PIWIL4 (ENSPTRG00000004187) FUT4 (ENSPTRG00000028425) C11H11orf97 (ENSPTRG00000047025) Bonobo MODERN SPECIES 2 BIRC2 (ENSPPAG00000004061) BIRC3 (ENSPPAG00000029649) YAP1 (ENSPPAG00000042951) CFAP300 (ENSPPAG00000038653) CEP126 (ENSPPAG00000005466) ANGPTL5 (ENSPPAG00000026385) TRPC6 (ENSPPAG00000028562) ENSPPAG00000028196 ENSPPAG00000007168 ARHGAP42 (ENSPPAG00000043081) CNTN5 (ENSPPAG00000003968) ENSPPAG00000043290 ENSPPAG00000023621 JRKL (ENSPPAG00000025455) CCDC82 (ENSPPAG00000021732) MAML2 (ENSPPAG00000033930) ##22 MTMR2 (ENSPPAG00000042525) ENSPPAG00000024555 FAM76B (ENSPPAG00000033075) SESN3 (ENSPPAG00000027541) ENDOD1 (ENSPPAG00000036031) ENSPPAG00000033651 KDM4E (ENSPPAG00000022047) CWC15 (ENSPPAG00000033609) AMOTL1 (ENSPPAG00000036699) PIWIL4 (ENSPPAG00000031181) FUT4 (ENSPPAG00000021481) C11orf97 (ENSPPAG00000031103) ANKRD49 (ENSPPAG00000037946) MRE11 (ENSPPAG00000034731) GPR83 (ENSPPAG00000039550) Human MODERN SPECIES 2 MMP20 (ENSG00000137674) MMP7 (ENSG00000137673) TMEM123 (ENSG00000152558) BIRC2 (ENSG00000110330) BIRC3 (ENSG00000023445) YAP1 (ENSG00000137693) CFAP300 (ENSG00000137691) CEP126 (ENSG00000110318) ANGPTL5 (ENSG00000187151) TRPC6 (ENSG00000137672) PGR (ENSG00000082175) ARHGAP42 (ENSG00000165895) CNTN5 (ENSG00000149972) JRKL (ENSG00000183340) CCDC82 (ENSG00000149231) MAML2 (ENSG00000184384) ##22 MTMR2 (ENSG00000087053) CEP57 (ENSG00000166037) FAM76B (ENSG00000077458) SESN3 (ENSG00000149212) ENDOD1 (ENSG00000149218) SRSF8 (ENSG00000263465) KDM4F (ENSG00000255855) KDM4E (ENSG00000235268) KDM4D (ENSG00000186280) CWC15 (ENSG00000150316) AMOTL1 (ENSG00000166025) FUT4 (ENSG00000196371) PIWIL4 (ENSG00000134627) C11orf97 (ENSG00000257057) ANKRD49 (ENSG00000168876) Orangutan MODERN SPECIES 2 MMP7 (ENSPPYG00000003810) TMEM123 (ENSPPYG00000003809) BIRC2 (ENSPPYG00000003808) BIRC3 (ENSPPYG00000034604) YAP1 (ENSPPYG00000003806) ENSPPYG00000003805 CEP126 (ENSPPYG00000003804) ANGPTL5 (ENSPPYG00000003803) TRPC6 (ENSPPYG00000003802) PGR (ENSPPYG00000003801) ARHGAP42 (ENSPPYG00000003799) ENSPPYG00000041195 CNTN5 (ENSPPYG00000003797) JRKL (ENSPPYG00000003796) CCDC82 (ENSPPYG00000003795) MAML2 (ENSPPYG00000003793) ##22 MTMR2 (ENSPPYG00000003792) CEP57 (ENSPPYG00000003790) FAM76B (ENSPPYG00000003789) SESN3 (ENSPPYG00000003788) ENDOD1 (ENSPPYG00000040533) SRSF8 (ENSPPYG00000035224) KDM4F (ENSPPYG00000037461) KDM4E (ENSPPYG00000041335) CWC15 (ENSPPYG00000003785) AMOTL1 (ENSPPYG00000003784) PIWIL4 (ENSPPYG00000003783) FUT4 (ENSPPYG00000037042) ENSPPYG00000029760 ENSPPYG00000041706 MRE11 (ENSPPYG00000037469) Gibbon DUPLICATION Gibbon MODERN SPECIES 424 ENSNLEG00000034001 ##22 Gibbon DUPLICATION Gibbon MODERN SPECIES 5 YAP1 (ENSNLEG00000007164) CFAP300 (ENSNLEG00000007163) CEP126 (ENSNLEG00000007160) ANGPTL5 (ENSNLEG00000007159) ENSNLEG00000027844 TRPC6 (ENSNLEG00000007157) ENSNLEG00000007154 ENSNLEG00000033273 ARHGAP42 (ENSNLEG00000007152) CNTN5 (ENSNLEG00000007147) ENSNLEG00000034421 ENSNLEG00000007146 JRKL (ENSNLEG00000007145) CCDC82 (ENSNLEG00000007144) ENSNLEG00000030751 ##22 ENSNLEG00000033879 ##22 MTMR2 (ENSNLEG00000007138) CEP57 (ENSNLEG00000007130) ENSNLEG00000031555 SESN3 (ENSNLEG00000007128) ENSNLEG00000035714 ENDOD1 (ENSNLEG00000007127) ENSNLEG00000031658 KDM4E (ENSNLEG00000007125) ENSNLEG00000035015 KDM4D (ENSNLEG00000019232) CWC15 (ENSNLEG00000031455) AMOTL1 (ENSNLEG00000007120) PIWIL4 (ENSNLEG00000007119) ENSNLEG00000007118 C11orf97 (ENSNLEG00000007117) Gibbon MODERN SPECIES 5 ENSNLEG00000033031 YAP1 (ENSNLEG00000007164) CFAP300 (ENSNLEG00000007163) CEP126 (ENSNLEG00000007160) ANGPTL5 (ENSNLEG00000007159) ENSNLEG00000027844 TRPC6 (ENSNLEG00000007157) ENSNLEG00000007154 ENSNLEG00000033273 ARHGAP42 (ENSNLEG00000007152) CNTN5 (ENSNLEG00000007147) ENSNLEG00000034421 ENSNLEG00000007146 JRKL (ENSNLEG00000007145) CCDC82 (ENSNLEG00000007144) ENSNLEG00000030751 ##22 ENSNLEG00000033879 ##22 MTMR2 (ENSNLEG00000007138) CEP57 (ENSNLEG00000007130) ENSNLEG00000031555 SESN3 (ENSNLEG00000007128) ENSNLEG00000035714 ENDOD1 (ENSNLEG00000007127) ENSNLEG00000031658 KDM4E (ENSNLEG00000007125) ENSNLEG00000035015 KDM4D (ENSNLEG00000019232) CWC15 (ENSNLEG00000031455) AMOTL1 (ENSNLEG00000007120) PIWIL4 (ENSNLEG00000007119) ENSNLEG00000007118 Strepsirrhini ANCESTRAL SPECIES 6 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Bushbaby MODERN SPECIES 116 CFAP300 (ENSOGAG00000024314) ENSOGAG00000028332 ENSOGAG00000030803 CEP126 (ENSOGAG00000009858) ANGPTL5 (ENSOGAG00000009855) TRPC6 (ENSOGAG00000000765) PGR (ENSOGAG00000012310) ARHGAP42 (ENSOGAG00000012302) ENSOGAG00000029060 CNTN5 (ENSOGAG00000004704) ENSOGAG00000027962 ENSOGAG00000033517 JRKL (ENSOGAG00000029206) CCDC82 (ENSOGAG00000007288) ENSOGAG00000024191 MAML2 (ENSOGAG00000000360) ##22 MTMR2 (ENSOGAG00000005773) ENSOGAG00000005770 FAM76B (ENSOGAG00000005765) SESN3 (ENSOGAG00000014489) ENDOD1 (ENSOGAG00000026634) ENSOGAG00000029074 ENSOGAG00000028767 ENSOGAG00000025313 Lemuriformes ANCESTRAL SPECIES 13 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713.d ENSGT00940000155492.b ENSGT00940000158183.m ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Lemuriformes_a ANCESTRAL SPECIES 147 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.a ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Coquerels sifaka MODERN SPECIES 801 JRKL (ENSPCOG00000004471) MAML2 (ENSPCOG00000028333) ##22 MTMR2 (ENSPCOG00000011333) CEP57 (ENSPCOG00000019585) FAM76B (ENSPCOG00000016586) ENSPCOG00000017746 SESN3 (ENSPCOG00000017878) ENDOD1 (ENSPCOG00000008619) KDM4D (ENSPCOG00000024679) CWC15 (ENSPCOG00000023913) AMOTL1 (ENSPCOG00000024699) PIWIL4 (ENSPCOG00000022264) C11orf97 (ENSPCOG00000019915) ANKRD49 (ENSPCOG00000022576) MRE11 (ENSPCOG00000015583) GPR83 (ENSPCOG00000022870) IZUMO1R (ENSPCOG00000020918) Greater bamboo lemur MODERN SPECIES 587 ENSPSMG00000018014 ENSPSMG00000018016 JRKL (ENSPSMG00000018018) CCDC82 (ENSPSMG00000018043) MAML2 (ENSPSMG00000018059) ##22 MTMR2 (ENSPSMG00000018109) Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 27 ENSMICG00000016656 ENSMICG00000044293 BIRC3 (ENSMICG00000002746) YAP1 (ENSMICG00000031456) CFAP300 (ENSMICG00000017739) CEP126 (ENSMICG00000009111) ANGPTL5 (ENSMICG00000031686) TRPC6 (ENSMICG00000010349) PGR (ENSMICG00000006331) ARHGAP42 (ENSMICG00000010758) ENSMICG00000015969 ENSMICG00000031298 ENSMICG00000029672 JRKL (ENSMICG00000041876) CCDC82 (ENSMICG00000009411) ENSMICG00000031831 ##22 MAML2 (ENSMICG00000009400) ##22 MTMR2 (ENSMICG00000009395) CEP57 (ENSMICG00000030559) FAM76B (ENSMICG00000036906) SESN3 (ENSMICG00000008178) CWC15 (ENSMICG00000042790) ENSMICG00000036230 AMOTL1 (ENSMICG00000001878) ENSMICG00000041717 PIWIL4 (ENSMICG00000006375) FUT4 (ENSMICG00000043071) C11orf97 (ENSMICG00000043866) ANKRD49 (ENSMICG00000013505) ENSMICG00000027455 GPR83 (ENSMICG00000028902) Mouse lemur MODERN SPECIES 27 ENSMICG00000044293 BIRC3 (ENSMICG00000002746) YAP1 (ENSMICG00000031456) CFAP300 (ENSMICG00000017739) CEP126 (ENSMICG00000009111) ANGPTL5 (ENSMICG00000031686) TRPC6 (ENSMICG00000010349) PGR (ENSMICG00000006331) ARHGAP42 (ENSMICG00000010758) ENSMICG00000015969 ENSMICG00000031298 ENSMICG00000029672 JRKL (ENSMICG00000041876) CCDC82 (ENSMICG00000009411) ENSMICG00000031831 ##22 MAML2 (ENSMICG00000009400) ##22 MTMR2 (ENSMICG00000009395) CEP57 (ENSMICG00000030559) FAM76B (ENSMICG00000036906) SESN3 (ENSMICG00000008178) CWC15 (ENSMICG00000042790) ENSMICG00000036230 AMOTL1 (ENSMICG00000001878) ENSMICG00000041717 PIWIL4 (ENSMICG00000006375) FUT4 (ENSMICG00000043071) C11orf97 (ENSMICG00000043866) ANKRD49 (ENSMICG00000013505) ENSMICG00000027455 GPR83 (ENSMICG00000028902) IZUMO1R (ENSMICG00000031112) Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Tree shrew MODERN SPECIES 4545 MAML2 (ENSTBEG00000004935) ##22 MTMR2 (ENSTBEG00000004099) CEP57 (ENSTBEG00000003141) FAM76B (ENSTBEG00000002188) Glires ANCESTRAL SPECIES 1 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Rodentia ANCESTRAL SPECIES 1 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Rodentia_A ANCESTRAL SPECIES 1 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Hystricomorpha ANCESTRAL SPECIES 5 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT01010000223591 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084.u ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Hystricomorpha_a ANCESTRAL SPECIES 10 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000160903 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084.u ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Hystricomorpha_b ANCESTRAL SPECIES 23 ENSGT00940000161871 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000160903 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT00940000162152 ENSGT00390000012084.u ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00520000058823 Long-tailed chinchilla MODERN SPECIES 119 MMP27 (ENSCLAG00000010798) MMP20 (ENSCLAG00000013214) MMP7 (ENSCLAG00000015356) BIRC2 (ENSCLAG00000013394) BIRC3 (ENSCLAG00000010783) YAP1 (ENSCLAG00000011113) CFAP300 (ENSCLAG00000013914) CEP126 (ENSCLAG00000012819) TRPC6 (ENSCLAG00000011949) ENSCLAG00000013886 ARHGAP42 (ENSCLAG00000014100) CNTN5 (ENSCLAG00000010625) ENSCLAG00000018078 JRKL (ENSCLAG00000017853) CCDC82 (ENSCLAG00000014287) MAML2 (ENSCLAG00000014659) ##22 MTMR2 (ENSCLAG00000011747) ENSCLAG00000011257 FAM76B (ENSCLAG00000010250) SESN3 (ENSCLAG00000016066) Degu MODERN SPECIES 53 ENSODEG00000012579 YAP1 (ENSODEG00000012897) ENSODEG00000013051 CFAP300 (ENSODEG00000014307) CEP126 (ENSODEG00000014031) ENSODEG00000013426 TRPC6 (ENSODEG00000014288) ENSODEG00000013619 ARHGAP42 (ENSODEG00000013928) ENSODEG00000013901 CNTN5 (ENSODEG00000014105) ENSODEG00000012986 ENSODEG00000014051 JRKL (ENSODEG00000020217) CCDC82 (ENSODEG00000012847) MAML2 (ENSODEG00000015630) ##22 ENSODEG00000020097 MTMR2 (ENSODEG00000013402) CEP57 (ENSODEG00000013214) FAM76B (ENSODEG00000013436) ENSODEG00000014506 SESN3 (ENSODEG00000014538) KDM4D (ENSODEG00000012937) ENSODEG00000014060 ENSODEG00000020081 AMOTL1 (ENSODEG00000013464) PIWIL4 (ENSODEG00000013015) ENSODEG00000020227 MRE11 (ENSODEG00000014786) ENSODEG00000013277 ENSODEG00000014210 Guinea pig MODERN SPECIES 19 MMP8 (ENSCPOG00000013813) MMP27 (ENSCPOG00000035593) MMP20 (ENSCPOG00000036970) ENSCPOG00000038069 BIRC2 (ENSCPOG00000010349) BIRC3 (ENSCPOG00000034907) YAP1 (ENSCPOG00000033105) CFAP300 (ENSCPOG00000011737) CEP126 (ENSCPOG00000001844) ANGPTL5 (ENSCPOG00000001842) TRPC6 (ENSCPOG00000005560) ENSCPOG00000030258 ARHGAP42 (ENSCPOG00000007842) CNTN5 (ENSCPOG00000011322) CCDC82 (ENSCPOG00000033086) MAML2 (ENSCPOG00000008516) ##22 MTMR2 (ENSCPOG00000008505) CEP57 (ENSCPOG00000008497) FAM76B (ENSCPOG00000040456) SESN3 (ENSCPOG00000019467) ENDOD1 (ENSCPOG00000002204) Naked mole-rat female MODERN SPECIES 24 YAP1 (ENSHGLG00000000291) ENSHGLG00000019794 ENSHGLG00000005333 BIRC3 (ENSHGLG00000004954) BIRC2 (ENSHGLG00000004179) ENSHGLG00000044313 ENSHGLG00000047684 MMP7 (ENSHGLG00000003863) ENSHGLG00000003570 ENSHGLG00000042812 ENSHGLG00000041631 ENSHGLG00000041058 CCDC82 (ENSHGLG00000013992) JRKL (ENSHGLG00000049214) ENSHGLG00000049135 MAML2 (ENSHGLG00000017672) ##22 ENSHGLG00000050231 ENSHGLG00000015893 ENSHGLG00000017903 FAM76B (ENSHGLG00000013754) ENSHGLG00000050488 ENSHGLG00000019419 ENSHGLG00000018327 ENSHGLG00000017774 ENSHGLG00000046281 ENSHGLG00000043269 ENSHGLG00000032452 ENSHGLG00000035638 ENSHGLG00000049265 AMOTL1 (ENSHGLG00000010959) ENSHGLG00000008729 Sciuridae ANCESTRAL SPECIES 2 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.h ENSGT00940000162152.g.b ENSGT00940000162152.g.a ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 Eurasian red squirrel MODERN SPECIES 2 BIRC3 (ENSSVLG00005013872) YAP1 (ENSSVLG00005013738) CFAP300 (ENSSVLG00005013383) CEP126 (ENSSVLG00005013261) ANGPTL5 (ENSSVLG00005013174) ENSSVLG00005013071 TRPC6 (ENSSVLG00005012644) ENSSVLG00005012488 PGR (ENSSVLG00005012195) ARHGAP42 (ENSSVLG00005012065) CNTN5 (ENSSVLG00005011074) ENSSVLG00005010963 ENSSVLG00005010908 JRKL (ENSSVLG00005010894) CCDC82 (ENSSVLG00005010580) ENSSVLG00005010533 ##22 MTMR2 (ENSSVLG00005010367) CEP57 (ENSSVLG00005010241) ENSSVLG00005010116 SESN3 (ENSSVLG00005009932) ENDOD1 (ENSSVLG00005009881) ENSSVLG00005009855 KDM4D (ENSSVLG00005009838) CWC15 (ENSSVLG00005009802) AMOTL1 (ENSSVLG00005009738) PIWIL4 (ENSSVLG00005009583) FUT4 (ENSSVLG00005009540) C11orf97 (ENSSVLG00005009503) ANKRD49 (ENSSVLG00005009488) ENSSVLG00005009454 MRE11 (ENSSVLG00005009395) Marmotini ANCESTRAL SPECIES 20 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b.e ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.h ENSGT00940000162152.g.b ENSGT00940000162152.g.a ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 Marmotini_b ANCESTRAL SPECIES 155 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152.g.b ENSGT00940000162152.g.a ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 276 JRKL (ENSUPAG00010014875) CCDC82 (ENSUPAG00010014877) ENSUPAG00010014913 ##22 ENSUPAG00010014925 ##22 MTMR2 (ENSUPAG00010014934) CEP57 (ENSUPAG00010014984) FAM76B (ENSUPAG00010015021) Arctic ground squirrel MODERN SPECIES 276 JRKL (ENSUPAG00010014875) CCDC82 (ENSUPAG00010014877) ENSUPAG00010014913 ##22 ENSUPAG00010014925 ##22 MTMR2 (ENSUPAG00010014934) CEP57 (ENSUPAG00010014984) FAM76B (ENSUPAG00010015021) Squirrel MODERN SPECIES 300 ENSSTOG00000029995 JRKL (ENSSTOG00000026474) CCDC82 (ENSSTOG00000002309) ENSSTOG00000033445 ##22 MTMR2 (ENSSTOG00000002284) CEP57 (ENSSTOG00000002278) FAM76B (ENSSTOG00000023725) SESN3 (ENSSTOG00000000033) ENDOD1 (ENSSTOG00000000032) Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 25 TMEM123 (ENSMMMG00000002579) ENSMMMG00000002595 BIRC3 (ENSMMMG00000002693) YAP1 (ENSMMMG00000002718) CFAP300 (ENSMMMG00000002751) CEP126 (ENSMMMG00000002769) ANGPTL5 (ENSMMMG00000002794) TRPC6 (ENSMMMG00000002831) PGR (ENSMMMG00000002898) ARHGAP42 (ENSMMMG00000002945) CNTN5 (ENSMMMG00000003014) ENSMMMG00000003243 JRKL (ENSMMMG00000003254) CCDC82 (ENSMMMG00000003266) ENSMMMG00000003341 ##22 ENSMMMG00000003357 ##22 MTMR2 (ENSMMMG00000003375) CEP57 (ENSMMMG00000003431) FAM76B (ENSMMMG00000003496) ENSMMMG00000003554 SESN3 (ENSMMMG00000003584) ENDOD1 (ENSMMMG00000003657) ENSMMMG00000003662 ENSMMMG00000003674 ENSMMMG00000003680 ENSMMMG00000003692 CWC15 (ENSMMMG00000003695) AMOTL1 (ENSMMMG00000003717) PIWIL4 (ENSMMMG00000003741) FUT4 (ENSMMMG00000003775) C11orf97 (ENSMMMG00000003791) Alpin marmot MODERN SPECIES 25 MMP7 (ENSMMMG00000002551) TMEM123 (ENSMMMG00000002579) ENSMMMG00000002595 BIRC3 (ENSMMMG00000002693) YAP1 (ENSMMMG00000002718) CFAP300 (ENSMMMG00000002751) CEP126 (ENSMMMG00000002769) ANGPTL5 (ENSMMMG00000002794) TRPC6 (ENSMMMG00000002831) PGR (ENSMMMG00000002898) ARHGAP42 (ENSMMMG00000002945) CNTN5 (ENSMMMG00000003014) ENSMMMG00000003243 JRKL (ENSMMMG00000003254) CCDC82 (ENSMMMG00000003266) ENSMMMG00000003341 ##22 ENSMMMG00000003357 ##22 MTMR2 (ENSMMMG00000003375) CEP57 (ENSMMMG00000003431) FAM76B (ENSMMMG00000003496) ENSMMMG00000003554 SESN3 (ENSMMMG00000003584) ENDOD1 (ENSMMMG00000003657) ENSMMMG00000003662 ENSMMMG00000003674 ENSMMMG00000003680 ENSMMMG00000003692 CWC15 (ENSMMMG00000003695) AMOTL1 (ENSMMMG00000003717) PIWIL4 (ENSMMMG00000003741) FUT4 (ENSMMMG00000003775) Rodentia_B ANCESTRAL SPECIES 23 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Kangaroo rat MODERN SPECIES 329 Mmp3 (ENSDORG00000015114) ENSDORG00000015112 Mmp10 (ENSDORG00000015107) Mmp8 (ENSDORG00000015105) Mmp27 (ENSDORG00000015102) Mmp20 (ENSDORG00000015101) Mmp7 (ENSDORG00000001516) Birc2 (ENSDORG00000010334) Yap1 (ENSDORG00000023430) Cfap300 (ENSDORG00000003243) Cep126 (ENSDORG00000025333) Trpc6 (ENSDORG00000005456) Arhgap42 (ENSDORG00000014906) Jrkl (ENSDORG00000012234) Ccdc82 (ENSDORG00000016570) Maml2 (ENSDORG00000013901) ##22 Mtmr2 (ENSDORG00000001033) Cep57 (ENSDORG00000001032) Fam76b (ENSDORG00000004977) Sesn3 (ENSDORG00000014812) Cwc15 (ENSDORG00000011075) Amotl1 (ENSDORG00000006612) ENSDORG00000029165 ENSDORG00000027168 Ankrd49 (ENSDORG00000013373) Myomorpha ANCESTRAL SPECIES 23 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Lesser Egyptian jerboa MODERN SPECIES 87 Tmem123 (ENSJJAG00000014178) ENSJJAG00000017306 ENSJJAG00000021580 ENSJJAG00000010414 ENSJJAG00000015982 Cfap300 (ENSJJAG00000022122) Cep126 (ENSJJAG00000014011) Trpc6 (ENSJJAG00000021679) ENSJJAG00000002569 Pgr (ENSJJAG00000015786) Arhgap42 (ENSJJAG00000023474) ENSJJAG00000000229 ENSJJAG00000007185 Jrkl (ENSJJAG00000000663) Ccdc82 (ENSJJAG00000017966) ENSJJAG00000002824 ##22 Mtmr2 (ENSJJAG00000009913) Cep57 (ENSJJAG00000013938) Fam76b (ENSJJAG00000017450) Sesn3 (ENSJJAG00000019262) ENSJJAG00000015656 ENSJJAG00000016968 Amotl1 (ENSJJAG00000000834) ENSJJAG00000002783 Fut4 (ENSJJAG00000015747) 1700012B09Rik (ENSJJAG00000020782) Ankrd49 (ENSJJAG00000023374) Mre11a (ENSJJAG00000009794) Izumo1r (ENSJJAG00000018637) Panx1 (ENSJJAG00000024378) Hephl1 (ENSJJAG00000015710) Muroidea ANCESTRAL SPECIES 29 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Muroidea_A ANCESTRAL SPECIES 23 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Cricetidae ANCESTRAL SPECIES 4 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00940000167787 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Cricetinae ANCESTRAL SPECIES 45 ENSGT00940000161871 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00940000167787 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Chinese hamster chok1gshd MODERN SPECIES 202 ENSCGRG00001022513 Birc2 (ENSCGRG00001023266) Birc3 (ENSCGRG00001008505) Yap1 (ENSCGRG00001011573) Cfap300 (ENSCGRG00001021391) Cep126 (ENSCGRG00001023949) Trpc6 (ENSCGRG00001006368) Pgr (ENSCGRG00001019400) Arhgap42 (ENSCGRG00001000196) ENSCGRG00001007078 Cntn5 (ENSCGRG00001022628) ENSCGRG00001023105 Jrkl (ENSCGRG00001010876) Ccdc82 (ENSCGRG00001017832) ENSCGRG00001023836 Maml2 (ENSCGRG00001007799) ##22 Mtmr2 (ENSCGRG00001014347) Cep57 (ENSCGRG00001022050) Fam76b (ENSCGRG00001010539) Sesn3 (ENSCGRG00001021337) Endod1 (ENSCGRG00001000699) Golden Hamster MODERN SPECIES 688 Mmp12 (ENSMAUG00000008249) Mmp3 (ENSMAUG00000011335) ENSMAUG00000009988 Mmp27 (ENSMAUG00000000778) Mmp20 (ENSMAUG00000011367) ENSMAUG00000016756 Birc2 (ENSMAUG00000018063) Cfap300 (ENSMAUG00000011879) Cep126 (ENSMAUG00000013444) Trpc6 (ENSMAUG00000014533) Pgr (ENSMAUG00000019127) Arhgap42 (ENSMAUG00000012529) Cntn5 (ENSMAUG00000012675) Jrkl (ENSMAUG00000016872) Ccdc82 (ENSMAUG00000019538) Maml2 (ENSMAUG00000012350) ##22 Mtmr2 (ENSMAUG00000014568) Cep57 (ENSMAUG00000016167) Fam76b (ENSMAUG00000008271) Cricetidae_B ANCESTRAL SPECIES 58 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00940000167787 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B Northern American deer mouse MODERN SPECIES 20 Birc3 (ENSPEMG00000020508) Yap1 (ENSPEMG00000022927) Cfap300 (ENSPEMG00000021710) Cep126 (ENSPEMG00000020512) ENSPEMG00000027711 ENSPEMG00000029807 Trpc6 (ENSPEMG00000012248) Pgr (ENSPEMG00000020732) Arhgap42 (ENSPEMG00000021176) ENSPEMG00000024722 Cntn5 (ENSPEMG00000011066) Jrkl (ENSPEMG00000004693) Ccdc82 (ENSPEMG00000021515) ENSPEMG00000022148 ENSPEMG00000008656 ENSPEMG00000022875 ##22 Mtmr2 (ENSPEMG00000018649) Cep57 (ENSPEMG00000022447) Fam76b (ENSPEMG00000028973) ENSPEMG00000028670 Sesn3 (ENSPEMG00000009677) ENSPEMG00000027788 Prairie vole MODERN SPECIES 13 Yap1 (ENSMOCG00000007486) Cfap300 (ENSMOCG00000013197) Cep126 (ENSMOCG00000013353) ENSMOCG00000014609 ENSMOCG00000006458 Trpc6 (ENSMOCG00000021166) Pgr (ENSMOCG00000016670) Arhgap42 (ENSMOCG00000004053) ENSMOCG00000008541 Cntn5 (ENSMOCG00000021354) ENSMOCG00000021331 ENSMOCG00000022546 Jrkl (ENSMOCG00000004889) Ccdc82 (ENSMOCG00000019062) ENSMOCG00000019222 Maml2 (ENSMOCG00000021568) ##22 Mtmr2 (ENSMOCG00000009930) Cep57 (ENSMOCG00000005014) Fam76b (ENSMOCG00000001551) Sesn3 (ENSMOCG00000013595) Endod1 (ENSMOCG00000016035) Cwf19l2 (ENSMOCG00000010389) Alkbh8 (ENSMOCG00000019349) ENSMOCG00000021818 ENSMOCG00000015072 Vstm5 (ENSMOCG00000012686) Med17 (ENSMOCG00000018802) 4931406C07Rik (ENSMOCG00000012170) Taf1d (ENSMOCG00000014011) Cep295 (ENSMOCG00000021770) ENSMOCG00000021789 Murinae ANCESTRAL SPECIES 3 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Mus ANCESTRAL SPECIES 4 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00900000143517 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Mus_A ANCESTRAL SPECIES 4 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00860000136210 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00900000143517 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Mus_B ANCESTRAL SPECIES 3 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00860000136210 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00900000143517 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Mouse MODERN SPECIES 18 Mmp27 (ENSMUSG00000070323) Mmp20 (ENSMUSG00000018620) Mmp7 (ENSMUSG00000018623) Tmem123 (ENSMUSG00000050912) Birc2 (ENSMUSG00000057367) Birc3 (ENSMUSG00000032000) Yap1 (ENSMUSG00000053110) Cfap300 (ENSMUSG00000053070) Cep126 (ENSMUSG00000040729) Trpc6 (ENSMUSG00000031997) Pgr (ENSMUSG00000031870) Arhgap42 (ENSMUSG00000050730) Cntn5 (ENSMUSG00000039488) Jrkl (ENSMUSG00000079083) Ccdc82 (ENSMUSG00000079084) Maml2 (ENSMUSG00000031925) ##22 Gm17571 (ENSMUSG00000090592) Mtmr2 (ENSMUSG00000031918) Cep57 (ENSMUSG00000031922) Fam76b (ENSMUSG00000037808) Sesn3 (ENSMUSG00000032009) Endod1 (ENSMUSG00000037419) Kdm4d (ENSMUSG00000053914) Cwc15 (ENSMUSG00000004096) Amotl1 (ENSMUSG00000013076) Piwil4 (ENSMUSG00000036912) Fut4 (ENSMUSG00000049307) 1700012B09Rik (ENSMUSG00000031927) Ankrd49 (ENSMUSG00000031931) Mre11a (ENSMUSG00000031928) Gpr83 (ENSMUSG00000031932) Mus_C ANCESTRAL SPECIES 8 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00860000136210 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00900000143517 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Steppe mouse MODERN SPECIES 2555 Jrkl (ENSMSIG00000028346) Ccdc82 (ENSMSIG00000028330) Maml2 (ENSMSIG00000028308) ##22 ENSMSIG00000028297 ENSMSIG00000028266 Cep57 (ENSMSIG00000028236) Fam76b (ENSMSIG00000028224) spretus MODERN SPECIES 18 Tmem123 (MGP_SPRETEiJ_G0032880) MGP_SPRETEiJ_G0032881 Birc3 (MGP_SPRETEiJ_G0032882) Yap1 (MGP_SPRETEiJ_G0032883) Cfap300 (MGP_SPRETEiJ_G0032884) Cep126 (MGP_SPRETEiJ_G0032885) MGP_SPRETEiJ_G0032886 Trpc6 (MGP_SPRETEiJ_G0032887) Pgr (MGP_SPRETEiJ_G0032888) MGP_SPRETEiJ_G0032889 Arhgap42 (MGP_SPRETEiJ_G0032890) Cntn5 (MGP_SPRETEiJ_G0032891) Jrkl (MGP_SPRETEiJ_G0032892) Ccdc82 (MGP_SPRETEiJ_G0032893) MGP_SPRETEiJ_G0032894 Maml2 (MGP_SPRETEiJ_G0032895) ##22 Mtmr2 (MGP_SPRETEiJ_G0032896) Cep57 (MGP_SPRETEiJ_G0032897) Fam76b (MGP_SPRETEiJ_G0032898) Sesn3 (MGP_SPRETEiJ_G0032899) Endod1 (MGP_SPRETEiJ_G0032900) Kdm4d (MGP_SPRETEiJ_G0032901) Cwc15 (MGP_SPRETEiJ_G0032902) Amotl1 (MGP_SPRETEiJ_G0032903) Piwil4 (MGP_SPRETEiJ_G0032904) Fut4 (MGP_SPRETEiJ_G0032905) 1700012B09Rik (MGP_SPRETEiJ_G0032906) Ankrd49 (MGP_SPRETEiJ_G0032907) Mre11a (MGP_SPRETEiJ_G0032908) MGP_SPRETEiJ_G0032909 Izumo1r (MGP_SPRETEiJ_G0032910) Ryukyu mouse MODERN SPECIES 18 Tmem123 (MGP_CAROLIEiJ_G0031760) MGP_CAROLIEiJ_G0031761 MGP_CAROLIEiJ_G0031762 Yap1 (MGP_CAROLIEiJ_G0031763) Cfap300 (MGP_CAROLIEiJ_G0031764) Cep126 (MGP_CAROLIEiJ_G0031765) MGP_CAROLIEiJ_G0031766 Trpc6 (MGP_CAROLIEiJ_G0031767) Pgr (MGP_CAROLIEiJ_G0031768) MGP_CAROLIEiJ_G0031769 Arhgap42 (MGP_CAROLIEiJ_G0031770) Cntn5 (MGP_CAROLIEiJ_G0031771) Jrkl (MGP_CAROLIEiJ_G0031772) Ccdc82 (MGP_CAROLIEiJ_G0031773) MGP_CAROLIEiJ_G0031774 Maml2 (MGP_CAROLIEiJ_G0031775) ##22 Mtmr2 (MGP_CAROLIEiJ_G0031776) Cep57 (MGP_CAROLIEiJ_G0031777) Fam76b (MGP_CAROLIEiJ_G0031778) Sesn3 (MGP_CAROLIEiJ_G0031779) Endod1 (MGP_CAROLIEiJ_G0031780) Kdm4d (MGP_CAROLIEiJ_G0031781) Cwc15 (MGP_CAROLIEiJ_G0031782) Amotl1 (MGP_CAROLIEiJ_G0031783) Piwil4 (MGP_CAROLIEiJ_G0031784) Fut4 (MGP_CAROLIEiJ_G0031785) 1700012B09Rik (MGP_CAROLIEiJ_G0031786) Ankrd49 (MGP_CAROLIEiJ_G0031787) Mre11a (MGP_CAROLIEiJ_G0031788) Gpr83 (MGP_CAROLIEiJ_G0031789) Izumo1r (MGP_CAROLIEiJ_G0031790) Shrew mouse MODERN SPECIES 1 Mmp20 (MGP_PahariEiJ_G0014636) Mmp7 (MGP_PahariEiJ_G0014637) Tmem123 (MGP_PahariEiJ_G0014638) MGP_PahariEiJ_G0014639 Birc3 (MGP_PahariEiJ_G0014640) Yap1 (MGP_PahariEiJ_G0014641) Cfap300 (MGP_PahariEiJ_G0014642) Cep126 (MGP_PahariEiJ_G0014643) Trpc6 (MGP_PahariEiJ_G0014644) Pgr (MGP_PahariEiJ_G0014645) Arhgap42 (MGP_PahariEiJ_G0014646) MGP_PahariEiJ_G0014647 Jrkl (MGP_PahariEiJ_G0014648) Ccdc82 (MGP_PahariEiJ_G0014649) MGP_PahariEiJ_G0014650 Maml2 (MGP_PahariEiJ_G0014651) ##22 Mtmr2 (MGP_PahariEiJ_G0014652) Cep57 (MGP_PahariEiJ_G0014653) Fam76b (MGP_PahariEiJ_G0014654) Sesn3 (MGP_PahariEiJ_G0014655) Endod1 (MGP_PahariEiJ_G0014656) Kdm4d (MGP_PahariEiJ_G0014657) Cwc15 (MGP_PahariEiJ_G0014658) Amotl1 (MGP_PahariEiJ_G0014659) Piwil4 (MGP_PahariEiJ_G0014660) Fut4 (MGP_PahariEiJ_G0014661) 1700012B09Rik (MGP_PahariEiJ_G0014662) Ankrd49 (MGP_PahariEiJ_G0014663) Mre11a (MGP_PahariEiJ_G0014664) Gpr83 (MGP_PahariEiJ_G0014665) Izumo1r (MGP_PahariEiJ_G0014666) Rat MODERN SPECIES 18 Birc2 (ENSRNOG00000010602) Birc3 (ENSRNOG00000005731) Yap1 (ENSRNOG00000005933) Cfap300 (ENSRNOG00000043410) Cep126 (ENSRNOG00000021839) ENSRNOG00000062568 LOC100362400 (ENSRNOG00000032531) Trpc6 (ENSRNOG00000006324) Pgr (ENSRNOG00000006831) Arhgap42 (ENSRNOG00000026821) ENSRNOG00000063507 Cntn5 (ENSRNOG00000007038) ENSRNOG00000064384 Jrkl (ENSRNOG00000047133) Ccdc82 (ENSRNOG00000005713) Maml2 (ENSRNOG00000005879) ##22 Mtmr2 (ENSRNOG00000005923) Cep57 (ENSRNOG00000006792) Fam76b (ENSRNOG00000024863) Sesn3 (ENSRNOG00000008173) Endod1 (ENSRNOG00000024757) LOC108348070 (ENSRNOG00000045905) Cwc15 (ENSRNOG00000008490) Amotl1 (ENSRNOG00000008990) Piwil4 (ENSRNOG00000009043) Fut4 (ENSRNOG00000009157) C8h11orf97 (ENSRNOG00000009203) Ankrd49 (ENSRNOG00000009233) Mre11 (ENSRNOG00000009506) Gpr83 (ENSRNOG00000030318) Izumo1r (ENSRNOG00000019894) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1547 Jrkl (ENSNGAG00000018080) Ccdc82 (ENSNGAG00000018253) ENSNGAG00000017436 ##22 ENSNGAG00000000408 ENSNGAG00000017608 ##22 ENSNGAG00000020338 Cep57 (ENSNGAG00000009593) Fam76b (ENSNGAG00000022558) Upper Galilee mountains blind mole rat MODERN SPECIES 1547 Jrkl (ENSNGAG00000018080) Ccdc82 (ENSNGAG00000018253) ENSNGAG00000017436 ##22 ENSNGAG00000000408 ENSNGAG00000017608 ##22 ENSNGAG00000020338 Cep57 (ENSNGAG00000009593) Fam76b (ENSNGAG00000022558) Lagomorpha ANCESTRAL SPECIES 5 ENSGT00940000161871 ENSGT00940000161159 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Rabbit MODERN SPECIES ENSOCUG00000026522 ENSOCUG00000024698 TRPC6 (ENSOCUG00000017832) PGR (ENSOCUG00000014693) ARHGAP42 (ENSOCUG00000006927) ENSOCUG00000037422 ENSOCUG00000007222 CNTN5 (ENSOCUG00000015047) ENSOCUG00000036924 ENSOCUG00000037475 ENSOCUG00000033547 ENSOCUG00000032795 ENSOCUG00000026047 JRKL (ENSOCUG00000024211) CCDC82 (ENSOCUG00000007312) MAML2 (ENSOCUG00000010820) ##22 MTMR2 (ENSOCUG00000014568) CEP57 (ENSOCUG00000014557) FAM76B (ENSOCUG00000014549) ENSOCUG00000036784 SESN3 (ENSOCUG00000026640) ENDOD1 (ENSOCUG00000014040) ENSOCUG00000038702 ENSOCUG00000035381 ENSOCUG00000031183 ENSOCUG00000032220 ENSOCUG00000001631 CWC15 (ENSOCUG00000001629) AMOTL1 (ENSOCUG00000001078) PIWIL4 (ENSOCUG00000002860) FUT4 (ENSOCUG00000014204) Pika MODERN SPECIES 3019 MAML2 (ENSOPRG00000015172) ##22 MTMR2 (ENSOPRG00000015146) CEP57 (ENSOPRG00000015118) Marsupialia ANCESTRAL SPECIES 5 ENSGT00940000161277 ENSGT00940000156340.b ENSGT00530000063929.b ENSGT00940000154175.g ENSGT00940000154175.h ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000153972.A Opossum MODERN SPECIES 3 ENSMODG00000000608 ENSMODG00000000611 ENSMODG00000000623 MMP20 (ENSMODG00000000639) MMP27 (ENSMODG00000000669) MMP8 (ENSMODG00000000692) MMP1 (ENSMODG00000000712) MMP3 (ENSMODG00000000734) ENSMODG00000000767 MMP13 (ENSMODG00000000794) DCUN1D5 (ENSMODG00000000824) DYNC2H1 (ENSMODG00000000925) PDGFD (ENSMODG00000000942) JRKL (ENSMODG00000024414) CCDC82 (ENSMODG00000000097) MAML2 (ENSMODG00000036741) ##22 MTMR2 (ENSMODG00000000116) CEP57 (ENSMODG00000000131) FAM76B (ENSMODG00000000139) SESN3 (ENSMODG00000000163) ENDOD1 (ENSMODG00000000165) ENSMODG00000000169 AMOTL1 (ENSMODG00000000180) PIWIL4 (ENSMODG00000000217) FUT4 (ENSMODG00000024373) ENSMODG00000028613 ENSMODG00000043171 ANKRD49 (ENSMODG00000000222) MRE11 (ENSMODG00000000231) GPR83 (ENSMODG00000000236) IZUMO1R (ENSMODG00000000260) Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00940000161277 ENSGT00940000156340.b ENSGT00530000063929.b ENSGT00940000154175.g ENSGT00940000154175.h ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00940000161737.n.b.a ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Tasmanian devil MODERN SPECIES 2 MMP20 (ENSSHAG00000013213) ENSSHAG00000012748 ENSSHAG00000031693 ENSSHAG00000022169 YAP1 (ENSSHAG00000031498) CFAP300 (ENSSHAG00000021373) ENSSHAG00000008521 ANGPTL5 (ENSSHAG00000008135) TRPC6 (ENSSHAG00000001852) PGR (ENSSHAG00000028354) ARHGAP42 (ENSSHAG00000015492) CNTN5 (ENSSHAG00000012347) ENSSHAG00000000656 JRKL (ENSSHAG00000029565) CCDC82 (ENSSHAG00000020626) MAML2 (ENSSHAG00000024964) ##22 MTMR2 (ENSSHAG00000012900) CEP57 (ENSSHAG00000013049) FAM76B (ENSSHAG00000030305) ENSSHAG00000014772 SESN3 (ENSSHAG00000016018) ENDOD1 (ENSSHAG00000016362) ENSSHAG00000016534 AMOTL1 (ENSSHAG00000016815) PIWIL4 (ENSSHAG00000017415) FUT4 (ENSSHAG00000032130) ENSSHAG00000028715 ENSSHAG00000021016 MRE11 (ENSSHAG00000017729) GPR83 (ENSSHAG00000024803) IZUMO1R (ENSSHAG00000029294) Diprotodontia ANCESTRAL SPECIES 11 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00940000161737.n.b.a ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Wallaby MODERN SPECIES 9051 ENSMEUG00000011747 ##22 Diprotodontia_a ANCESTRAL SPECIES 9 ENSGT00940000159119.b ENSGT00530000063891 ENSGT00940000161119 ENSGT00940000159935 ENSGT00580000081600.c.a ENSGT01010000222287.B.a.b.a ENSGT00940000155757 ENSGT00940000156280 ENSGT00940000158304 ENSGT00390000020445 ENSGT00940000163221 ENSGT00940000155281 ENSGT00940000158227 ENSGT00940000161513 ENSGT00390000004986 ENSGT00950000183201.a ##22 ENSGT00940000153669.a.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00940000161737.n.b.a ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00520000058823 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336.d ENSGT00950000183144.A.j Common wonbat MODERN SPECIES 459 CCDC82 (ENSVURG00010010939) MAML2 (ENSVURG00010010918) ##22 ENSVURG00010010854 CEP57 (ENSVURG00010010807) FAM76B (ENSVURG00010010774) ENSVURG00010010758 SESN3 (ENSVURG00010010715) ENDOD1 (ENSVURG00010010700) CWC15 (ENSVURG00010010692) AMOTL1 (ENSVURG00010010648) PIWIL4 (ENSVURG00010010619) ENSVURG00010010592 C11orf97 (ENSVURG00010010576) ANKRD49 (ENSVURG00010010565) MRE11 (ENSVURG00010010496) GPR83 (ENSVURG00010010363) IZUMO1R (ENSVURG00010010349) koala MODERN SPECIES 86 ENSPCIG00000001111 JRKL (ENSPCIG00000001127) CCDC82 (ENSPCIG00000001133) ENSPCIG00000001152 ##22 MTMR2 (ENSPCIG00000001170) CEP57 (ENSPCIG00000035948) FAM76B (ENSPCIG00000001260) SESN3 (ENSPCIG00000001309) ENDOD1 (ENSPCIG00000001331) CWC15 (ENSPCIG00000001348) AMOTL1 (ENSPCIG00000001368) PIWIL4 (ENSPCIG00000030600) ENSPCIG00000030597 C11orf97 (ENSPCIG00000034457) ANKRD49 (ENSPCIG00000009610) MRE11 (ENSPCIG00000009614) GPR83 (ENSPCIG00000036706) IZUMO1R (ENSPCIG00000003349) ENSPCIG00000003364 Anura ANCESTRAL SPECIES 28 ENSGT00940000161277 ENSGT00940000160903.b ENSGT00940000160903.a ENSGT00530000063929.b ENSGT00940000154175 ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT00390000004986 ENSGT00940000175059 ENSGT00950000183201.a ##22 ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.D ENSGT01030000234592.B ENSGT00390000012084 ENSGT00940000160158 ENSGT00950000183200.A.a.a ENSGT00940000162506 ENSGT00390000003919 ENSGT00390000017288 ENSGT00940000154336 ENSGT00940000153972.A ENSGT00940000158517 ENSGT00940000166029.a Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000002506 ANGPTL5 (ENSLLEG00000002451) ENSLLEG00000002445 TRPC6 (ENSLLEG00000002306) PGR (ENSLLEG00000002160) ARHGAP42 (ENSLLEG00000001987) ENSLLEG00000001943 CNTN5 (ENSLLEG00000001802) ENSLLEG00000001741 ENSLLEG00000001726 ENSLLEG00000001711 ENSLLEG00000001704 ENSLLEG00000001695 ENSLLEG00000001686 ENSLLEG00000001648 MAML2 (ENSLLEG00000001625) ##22 MTMR2 (ENSLLEG00000001551) CEP57 (ENSLLEG00000001493) FAM76B (ENSLLEG00000001380) ENSLLEG00000001302 ENSLLEG00000001264 CWC15 (ENSLLEG00000001240) AMOTL1 (ENSLLEG00000001089) PIWIL4 (ENSLLEG00000000999) FUT4 (ENSLLEG00000000971) ENSLLEG00000000917 ANKRD49 (ENSLLEG00000000894) MRE11 (ENSLLEG00000000758) ENSLLEG00000000746 GPR83 (ENSLLEG00000000726) ENSLLEG00000000696 Frog MODERN SPECIES 2 mmp3 (ENSXETG00000022185) tmem123 (ENSXETG00000040034) ENSXETG00000049238 birc2 (ENSXETG00000022183) yap1 (ENSXETG00000032689) cfap300 (ENSXETG00000022178) cep126 (ENSXETG00000032504) angptl5 (ENSXETG00000005480) trpc6 (ENSXETG00000005481) pgr (ENSXETG00000005482) ENSXETG00000042365 arhgap42 (ENSXETG00000005487) ENSXETG00000034983 cntn5 (ENSXETG00000005492) ccdc82 (ENSXETG00000007073) maml2 (ENSXETG00000007075) ##22 ENSXETG00000034471 cwc15 (ENSXETG00000007076) endod1 (ENSXETG00000036422) sesn3 (ENSXETG00000007079) fam76b (ENSXETG00000007080) cep57 (ENSXETG00000007081) mtmr2 (ENSXETG00000007082) amotl1 (ENSXETG00000006385) ENSXETG00000043087 ENSXETG00000047652 piwil4 (ENSXETG00000006411) fut4 (ENSXETG00000025292) ankrd49 (ENSXETG00000006415) ankrd49 (ENSXETG00000037124) mre11 (ENSXETG00000006417) Actinopterygii ANCESTRAL SPECIES ENSGT00950000183201.a ##22 Reedfish MODERN SPECIES 13 ENSECRG00000001947 adra2c (ENSECRG00000001933) ENSECRG00000001928 ENSECRG00000001919 lrpap1 (ENSECRG00000001900) DOK7 (ENSECRG00000001854) HGFAC (ENSECRG00000001772) RGS12 (ENSECRG00000001742) msantd1 (ENSECRG00000001724) ENSECRG00000001714 htt (ENSECRG00000001584) grk4 (ENSECRG00000001430) ENSECRG00000001345 ##24 clgn (ENSECRG00000001306) ##21 scoca (ENSECRG00000001285) ENSECRG00000001262 ##22 mgst2 (ENSECRG00000001245) setd7 (ENSECRG00000001130) zgc:113425 (ENSECRG00000001050) rab33ba (ENSECRG00000001034) mlsl (ENSECRG00000000961) naa15b (ENSECRG00000021817) ENSECRG00000021782 elf2b (ENSECRG00000021755) NOCT (ENSECRG00000021737) SLC7A11 (ENSECRG00000021710) pcdh18b (ENSECRG00000021692) pcdh10b (ENSECRG00000021682) zgc:77739 (ENSECRG00000021665) SCLT1 (ENSECRG00000021642) jade1 (ENSECRG00000021625)