Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00940000161487	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT01030000236091 #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00950000186148	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000178333 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000164840	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT01030000236091 #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00950000186148	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000178333 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37
Glires	ANCESTRAL SPECIES	7	ENSGT00940000164840	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT01030000236091 #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00950000186148	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000178333 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000164840	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT01030000236091 #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00950000186148	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000178333 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000161487	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT01030000236091 #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00950000186148	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000178333 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37
Sciuridae	ANCESTRAL SPECIES	33	ENSGT00940000160245	ENSGT00940000161487	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT01030000236091 #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00950000186148	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000178333 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37
Eurasian red squirrel	MODERN SPECIES	15	ENSSVLG00005003942 #7	ENSSVLG00005003957 #8	PROP1 (ENSSVLG00005003982) #9	ZNF354B (ENSSVLG00005003997) #10	ZFP2 (ENSSVLG00005004011) #11	ZNF454 (ENSSVLG00005004024) #12	GRM6 (ENSSVLG00005004048) #13	ZNF879 (ENSSVLG00005004068) #14	ZNF354C (ENSSVLG00005004083) #15	ADAMTS2 (ENSSVLG00005004107) #16	RUFY1 (ENSSVLG00005004214) #17	HNRNPH1 (ENSSVLG00005004313) #18	CBY3 (ENSSVLG00005004437) #19	CANX (ENSSVLG00005004460) #20	ENSSVLG00005004484 #21	MAML1 (ENSSVLG00005004507) #22	LTC4S (ENSSVLG00005004534) #23	MGAT4B (ENSSVLG00005004599) #24	SQSTM1 (ENSSVLG00005004679) #25	MRNIP (ENSSVLG00005004714) #26	TBC1D9B (ENSSVLG00005004773) #27	ENSSVLG00005004884 #28	RNF130 (ENSSVLG00005004920) #29	RASGEF1C (ENSSVLG00005004985) #30	MAPK9 (ENSSVLG00005005069) #31	ENSSVLG00005005097 #32	GFPT2 (ENSSVLG00005005125) #33	CNOT6 (ENSSVLG00005005179) #34	SCGB3A1 (ENSSVLG00005005231) #35	ENSSVLG00005005257 #36	ENSSVLG00005005292 #37
Marmotini	ANCESTRAL SPECIES	90		ENSGT00940000162327	ENSGT00940000163610	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00950000186148	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.d.b.a
Marmotini_b	ANCESTRAL SPECIES	162		ENSGT00940000162327	ENSGT00940000163610	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.d.b.a
Arctic ground squirrel	MODERN SPECIES	533															CANX (ENSUPAG00010012868) #20	MAML1 (ENSUPAG00010012921) #22	LTC4S (ENSUPAG00010012940) #23	MGAT4B (ENSUPAG00010012951) #24	SQSTM1 (ENSUPAG00010012981) #25	MRNIP (ENSUPAG00010013026) #26	TBC1D9B (ENSUPAG00010013038) #27	RNF130 (ENSUPAG00010013174) #29	RASGEF1C (ENSUPAG00010013202) #30	MAPK9 (ENSUPAG00010013292) #32	GFPT2 (ENSUPAG00010013498) #33	ENSUPAG00010013530	CNOT6 (ENSUPAG00010013547) #34	SCGB3A1 (ENSUPAG00010013577) #35	FLT4 (ENSUPAG00010013592)	ENSUPAG00010013659 #37	ENSUPAG00010013751
Squirrel	MODERN SPECIES	339		ENSSTOG00000001898	ENSSTOG00000027829	PROP1 (ENSSTOG00000013571) #9	ZNF354B (ENSSTOG00000008858) #10	ZFP2 (ENSSTOG00000034472) #11	ZNF454 (ENSSTOG00000029783) #12	GRM6 (ENSSTOG00000021282) #13	ZNF879 (ENSSTOG00000033666) #14	ZNF354C (ENSSTOG00000023695) #15	ADAMTS2 (ENSSTOG00000004811) #16	RUFY1 (ENSSTOG00000016368) #17	HNRNPH1 (ENSSTOG00000016376) #18	CBY3 (ENSSTOG00000013625) #19	CANX (ENSSTOG00000013636) #20	MAML1 (ENSSTOG00000013644) #22	LTC4S (ENSSTOG00000028546) #23	MGAT4B (ENSSTOG00000015692) #24	SQSTM1 (ENSSTOG00000013654) #25	ENSSTOG00000013660 #26	TBC1D9B (ENSSTOG00000013665) #27	RNF130 (ENSSTOG00000013681) #29	RASGEF1C (ENSSTOG00000002744) #30	MAPK9 (ENSSTOG00000002755) #32	GFPT2 (ENSSTOG00000002766) #33	ENSSTOG00000026322	CNOT6 (ENSSTOG00000002803) #34	SCGB3A1 (ENSSTOG00000029379) #35	FLT4 (ENSSTOG00000009900)	ENSSTOG00000024162	ENSSTOG00000023199
Alpin marmot	MODERN SPECIES	119		PGBD2 (ENSMMMG00000010992)	ENSMMMG00000010966	PROP1 (ENSMMMG00000010955) #9	ZNF354B (ENSMMMG00000010934) #10	ZFP2 (ENSMMMG00000010928) #11	ZNF454 (ENSMMMG00000010924) #12	GRM6 (ENSMMMG00000010868) #13	ZNF879 (ENSMMMG00000010856) #14	ZNF354C (ENSMMMG00000010838) #15	ADAMTS2 (ENSMMMG00000010786) #16	RUFY1 (ENSMMMG00000010729) #17	HNRNPH1 (ENSMMMG00000010637) #18	ENSMMMG00000010630 #19	CANX (ENSMMMG00000010583) #20	MAML1 (ENSMMMG00000010563) #22	LTC4S (ENSMMMG00000010544) #23	MGAT4B (ENSMMMG00000010531) #24	SQSTM1 (ENSMMMG00000010495) #25	ENSMMMG00000010488	ENSMMMG00000010477 #26	ENSMMMG00000010472 #28	TBC1D9B (ENSMMMG00000010464) #27	RNF130 (ENSMMMG00000010453) #29	RASGEF1C (ENSMMMG00000010333) #30	MAPK9 (ENSMMMG00000009979) #32	GFPT2 (ENSMMMG00000009950) #33	ENSMMMG00000009922	ENSMMMG00000009920	CNOT6 (ENSMMMG00000009896) #34	SCGB3A1 (ENSMMMG00000009881) #35
Hystricomorpha	ANCESTRAL SPECIES	30	ENSGT00940000160245	ENSGT00940000161487	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37
Hystricomorpha_a	ANCESTRAL SPECIES	74	ENSGT00940000162238	ENSGT00940000160245	ENSGT00940000161487	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358
Hystricomorpha_b	ANCESTRAL SPECIES	19	ENSGT00940000162238	ENSGT00940000160245	ENSGT00940000161487	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358
Long-tailed chinchilla	MODERN SPECIES	115	CLK4 (ENSCLAG00000013604)	ZNF354A (ENSCLAG00000014648)	ENSCLAG00000010643 #7	ENSCLAG00000017710 #7	ZNF354B (ENSCLAG00000013514) #10	ZFP2 (ENSCLAG00000011174) #11	ENSCLAG00000010435 #12	ENSCLAG00000010195 #12	GRM6 (ENSCLAG00000015195) #13	ZNF879 (ENSCLAG00000013696) #14	ZNF354C (ENSCLAG00000012651) #15	ADAMTS2 (ENSCLAG00000012213) #16	RUFY1 (ENSCLAG00000012650) #17	HNRNPH1 (ENSCLAG00000013617) #18	CANX (ENSCLAG00000012635) #20	MAML1 (ENSCLAG00000012443) #22	MGAT4B (ENSCLAG00000013986) #24	SQSTM1 (ENSCLAG00000014864) #25	TBC1D9B (ENSCLAG00000010716) #27	RNF130 (ENSCLAG00000012509) #29	RASGEF1C (ENSCLAG00000010592) #30	MAPK9 (ENSCLAG00000011477) #32	GFPT2 (ENSCLAG00000011097) #33	CNOT6 (ENSCLAG00000010489) #34	SCGB3A1 (ENSCLAG00000017376) #35	FLT4 (ENSCLAG00000012174)
Degu	MODERN SPECIES	70	ENSODEG00000007622	CLK4 (ENSODEG00000006750)	ZNF354A (ENSODEG00000008278)	ENSODEG00000006751	ENSODEG00000007859 #7	PROP1 (ENSODEG00000007660) #9	ZNF354B (ENSODEG00000007968) #10	ZNF454 (ENSODEG00000007335) #12	GRM6 (ENSODEG00000009985) #13	ZNF879 (ENSODEG00000007967) #14	ZNF354C (ENSODEG00000007509) #15	ADAMTS2 (ENSODEG00000010343) #16	RUFY1 (ENSODEG00000006045) #17	ENSODEG00000007058 #18	CANX (ENSODEG00000007247) #20	MAML1 (ENSODEG00000007120) #22	LTC4S (ENSODEG00000006956) #23	MGAT4B (ENSODEG00000006661) #24	SQSTM1 (ENSODEG00000007536) #25	TBC1D9B (ENSODEG00000007268) #27	RNF130 (ENSODEG00000006815) #29	ENSODEG00000006074 #32	GFPT2 (ENSODEG00000007246) #33	ENSODEG00000006939	CNOT6 (ENSODEG00000007041) #34	SCGB3A1 (ENSODEG00000006628) #35	FLT4 (ENSODEG00000006420)
Guinea pig	MODERN SPECIES	176	ZNF354A (ENSCPOG00000034791)	ENSCPOG00000037406 #7	ENSCPOG00000025194 #7	PROP1 (ENSCPOG00000020734) #9	ZNF354B (ENSCPOG00000002227) #10	ZFP2 (ENSCPOG00000031347) #11	ENSCPOG00000033835 #12	ENSCPOG00000035563 #12	GRM6 (ENSCPOG00000001162) #13	ZNF879 (ENSCPOG00000040313) #14	ZNF354C (ENSCPOG00000038581) #15	ADAMTS2 (ENSCPOG00000001168) #16	RUFY1 (ENSCPOG00000012088) #17	ENSCPOG00000001485 #18	CANX (ENSCPOG00000003259) #20	MAML1 (ENSCPOG00000009382) #22	LTC4S (ENSCPOG00000021312) #23	MGAT4B (ENSCPOG00000005836) #24	SQSTM1 (ENSCPOG00000026534) #25	TBC1D9B (ENSCPOG00000011294) #27	ENSCPOG00000015076	RNF130 (ENSCPOG00000013821) #29
Naked mole-rat female	MODERN SPECIES	23	ENSHGLG00000045105 #7	ENSHGLG00000032445 #7	ENSHGLG00000009648 #9	ENSHGLG00000034750 #7	ENSHGLG00000033241 #7	ENSHGLG00000047455 #10	ZFP2 (ENSHGLG00000033138) #11	GRM6 (ENSHGLG00000013576) #13	ZNF879 (ENSHGLG00000013266) #14	ENSHGLG00000019454 #15	ADAMTS2 (ENSHGLG00000017531) #16	RUFY1 (ENSHGLG00000017638) #17	HNRNPH1 (ENSHGLG00000018565) #18	ENSHGLG00000014040 #19	ENSHGLG00000014507 #20	MAML1 (ENSHGLG00000007422) #22	LTC4S (ENSHGLG00000008079) #23	ENSHGLG00000010792 #24	SQSTM1 (ENSHGLG00000012249) #25	ENSHGLG00000034162 #26	TBC1D9B (ENSHGLG00000014248) #27	RNF130 (ENSHGLG00000019044) #29	ENSHGLG00000016658	RASGEF1C (ENSHGLG00000018254) #30	ENSHGLG00000039343	MAPK9 (ENSHGLG00000018063) #32	GFPT2 (ENSHGLG00000018020) #33	CNOT6 (ENSHGLG00000017756) #34	ENSHGLG00000015320 #35	ENSHGLG00000017837	ENSHGLG00000019068 #37
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00840000130327	ENSGT00940000161487	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b	ENSGT00530000063632.B
Myomorpha	ANCESTRAL SPECIES	28	ENSGT00840000130327	ENSGT00940000161487	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.f	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a
Muroidea	ANCESTRAL SPECIES	10	ENSGT00940000161487	ENSGT00940000164840	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000162330.i.a.b.a #7	ENSGT00940000162330.i.a.a #7	ENSGT00940000162330.j #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000162330.i.a.b.a #7	ENSGT00940000162330.i.a.a #7	ENSGT00940000162330.j #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00840000130327	ENSGT00940000161487	ENSGT00940000162330.j #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b
Northern American deer mouse	MODERN SPECIES	21	ENSPEMG00000025212 #7	ENSPEMG00000026849 #7	Or1ad6 (ENSPEMG00000029264) #7	Prop1 (ENSPEMG00000002087) #9	Zfp354b (ENSPEMG00000001281) #10	Zfp2 (ENSPEMG00000030164) #11	Zfp454 (ENSPEMG00000009308) #12	Grm6 (ENSPEMG00000012676) #13	Zfp879 (ENSPEMG00000010770) #14	Zfp354c (ENSPEMG00000014426) #15	Adamts2 (ENSPEMG00000018873) #16	Rufy1 (ENSPEMG00000009753) #17	Hnrnph1 (ENSPEMG00000018866) #18	ENSPEMG00000017877 #19	Canx (ENSPEMG00000005531) #20	Maml1 (ENSPEMG00000019224) #22	Ltc4s (ENSPEMG00000027708)	Mgat4b (ENSPEMG00000014635) #24	Sqstm1 (ENSPEMG00000019274) #25	Mrnip (ENSPEMG00000018478) #26	Tbc1d9b (ENSPEMG00000013746) #27	Rnf130 (ENSPEMG00000016730) #29	Rasgef1c (ENSPEMG00000018905) #30	Mapk9 (ENSPEMG00000016205) #32	Gfpt2 (ENSPEMG00000001870) #33	Cnot6 (ENSPEMG00000000627) #34	Scgb3a1 (ENSPEMG00000001932) #35	Flt4 (ENSPEMG00000013317)	ENSPEMG00000026395	ENSPEMG00000024369	ENSPEMG00000028647
Prairie vole	MODERN SPECIES	15	Clk4 (ENSMOCG00000022044)	ENSMOCG00000002350	Zfp354a (ENSMOCG00000003692)	Prop1 (ENSMOCG00000021712) #9	Zfp354b (ENSMOCG00000019941) #10	Zfp2 (ENSMOCG00000022747) #11	Zfp454 (ENSMOCG00000020470) #12	Grm6 (ENSMOCG00000018877) #13	Zfp879 (ENSMOCG00000020947) #14	Zfp354c (ENSMOCG00000022297) #15	Adamts2 (ENSMOCG00000022331) #16	Rufy1 (ENSMOCG00000003244) #17	Hnrnph1 (ENSMOCG00000020579) #18	ENSMOCG00000011359 #19	Canx (ENSMOCG00000011838) #20	Maml1 (ENSMOCG00000001181) #22	ENSMOCG00000021052 #23	Mgat4b (ENSMOCG00000010677) #24	ENSMOCG00000002756	ENSMOCG00000019043	Mrnip (ENSMOCG00000014732) #26	Tbc1d9b (ENSMOCG00000017854) #27	Rnf130 (ENSMOCG00000022727) #29	Rasgef1c (ENSMOCG00000017254) #30	Mapk9 (ENSMOCG00000020546) #32	Gfpt2 (ENSMOCG00000022580) #33	Cnot6 (ENSMOCG00000021662) #34	Scgb3a1 (ENSMOCG00000018902) #35	Flt4 (ENSMOCG00000016968)	ENSMOCG00000002436	ENSMOCG00000002339
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000162330.i.a.b.a #7	ENSGT00940000162330.i.a.a #7	ENSGT00940000162330.j #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b
Chinese hamster chok1gshd	MODERN SPECIES	229	Or1ad1 (ENSCGRG00001005982) #7	Or1ad6 (ENSCGRG00001007584) #7	Prop1 (ENSCGRG00001004549) #9	Zfp2 (ENSCGRG00001006658) #11	Zfp354b (ENSCGRG00001006089) #10	Zfp454 (ENSCGRG00001013939) #12	Grm6 (ENSCGRG00001015589) #13	Zfp879 (ENSCGRG00001013407) #14	Zfp354c (ENSCGRG00001011620) #15	Adamts2 (ENSCGRG00001017939) #16	ENSCGRG00001015852	Rufy1 (ENSCGRG00001013990) #17	Hnrnph1 (ENSCGRG00001013538) #18	Cby3 (ENSCGRG00001009348) #19	Canx (ENSCGRG00001017710) #20	Maml1 (ENSCGRG00001016447) #22	ENSCGRG00001013494 #23	Mgat4b (ENSCGRG00001006474) #24	ENSCGRG00001010734	Sqstm1 (ENSCGRG00001009697) #25	Mrnip (ENSCGRG00001004426) #26	Tbc1d9b (ENSCGRG00001020092) #27	Rnf130 (ENSCGRG00001021248) #29	Rasgef1c (ENSCGRG00001012629) #30	Mapk9 (ENSCGRG00001007000) #32	Gfpt2 (ENSCGRG00001020958) #33	Cnot6 (ENSCGRG00001011452) #34	Scgb3a1 (ENSCGRG00001005289) #35	Flt4 (ENSCGRG00001019633)	ENSCGRG00001001933	ENSCGRG00001015595
Golden Hamster	MODERN SPECIES	647	ENSMAUG00000008965	Clk4 (ENSMAUG00000006824)	Zfp354a (ENSMAUG00000000735)	Prop1 (ENSMAUG00000013991) #9	Zfp354b (ENSMAUG00000000163) #10	Zfp2 (ENSMAUG00000006975) #11	Zfp454 (ENSMAUG00000013415) #12	Grm6 (ENSMAUG00000017668) #13	Zfp879 (ENSMAUG00000000179) #14	Zfp354c (ENSMAUG00000001171) #15	Adamts2 (ENSMAUG00000000258) #16	Rufy1 (ENSMAUG00000010229) #17	Hnrnph1 (ENSMAUG00000012959) #18	ENSMAUG00000005355 #19	Canx (ENSMAUG00000007570) #20	Maml1 (ENSMAUG00000011048) #22	ENSMAUG00000004203 #23	Mgat4b (ENSMAUG00000000092) #24	Sqstm1 (ENSMAUG00000014382) #25	Mrnip (ENSMAUG00000016042) #26	Tbc1d9b (ENSMAUG00000014065) #27	Rnf130 (ENSMAUG00000015405) #29	Rasgef1c (ENSMAUG00000017005) #30	Mapk9 (ENSMAUG00000017175) #32	Gfpt2 (ENSMAUG00000000755) #33	Cnot6 (ENSMAUG00000019798) #34	Scgb3a1 (ENSMAUG00000012240) #35	Flt4 (ENSMAUG00000014271)	ENSMAUG00000018285	ENSMAUG00000016974	Or2y16 (ENSMAUG00000016979)
Murinae	ANCESTRAL SPECIES	7	ENSGT00940000162330.i.a.b.a #7	ENSGT00940000162330.i.a.a #7	ENSGT00940000162330.j #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.f	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.e
Mus	ANCESTRAL SPECIES	2	ENSGT00940000162330.i.b #7	ENSGT00940000162330.i.a.a #7	ENSGT00940000162330.j #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.f	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.e	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.a
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000162330.i.a.a #7	ENSGT00940000162330.j #7	ENSGT00940000162292 #9	ENSGT00860000136315	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00900000143680	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.f	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.e	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.a
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000162330.i.a.a #7	ENSGT00940000162330.j #7	ENSGT00940000162292 #9	ENSGT00860000136315	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00900000143680	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.f	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.e	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.a
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000162330.i.a.a #7	ENSGT00940000162330.j #7	ENSGT00940000162292 #9	ENSGT00860000136315	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00900000143680	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b
spretus	MODERN SPECIES	2	Or1ad1 (MGP_SPRETEiJ_G0017147) #7	Or1ad6 (MGP_SPRETEiJ_G0017146) #7	Prop1 (MGP_SPRETEiJ_G0017145) #9	4933414I15Rik (MGP_SPRETEiJ_G0017144)	Zfp354b (MGP_SPRETEiJ_G0017143) #10	Zfp2 (MGP_SPRETEiJ_G0017142) #11	Zfp454 (MGP_SPRETEiJ_G0017141) #12	Grm6 (MGP_SPRETEiJ_G0017140) #13	Zfp879 (MGP_SPRETEiJ_G0017139) #14	Zfp354c (MGP_SPRETEiJ_G0017138) #15	Adamts2 (MGP_SPRETEiJ_G0017137) #16	Rufy1 (MGP_SPRETEiJ_G0017136) #17	MGP_SPRETEiJ_G0017135 #18	MGP_SPRETEiJ_G0017134 #19	Canx (MGP_SPRETEiJ_G0017133) #20	Maml1 (MGP_SPRETEiJ_G0017132) #22	Ltc4s (MGP_SPRETEiJ_G0017131)	Mgat4b (MGP_SPRETEiJ_G0017130) #24	Sqstm1 (MGP_SPRETEiJ_G0017129) #25	Mrnip (MGP_SPRETEiJ_G0017128) #26	Tbc1d9b (MGP_SPRETEiJ_G0017127) #27	Rnf130 (MGP_SPRETEiJ_G0017126) #29	Rasgef1c (MGP_SPRETEiJ_G0017125) #30	Mapk9 (MGP_SPRETEiJ_G0017124) #32	Gfpt2 (MGP_SPRETEiJ_G0017123) #33	Cnot6 (MGP_SPRETEiJ_G0017122) #34	Scgb3a1 (MGP_SPRETEiJ_G0017121) #35	Flt4 (MGP_SPRETEiJ_G0017120)	MGP_SPRETEiJ_G0017119	MGP_SPRETEiJ_G0017118	MGP_SPRETEiJ_G0017117
Steppe mouse	MODERN SPECIES	2758	Or1ad1 (ENSMSIG00000010102) #7	Or1ad6 (ENSMSIG00000010084) #7	Prop1 (ENSMSIG00000010077) #9	4933414I15Rik (ENSMSIG00000010069)	Zfp354b (ENSMSIG00000010046) #10	Zfp2 (ENSMSIG00000010031) #11	Zfp454 (ENSMSIG00000010013) #12	Grm6 (ENSMSIG00000009979) #13	Zfp879 (ENSMSIG00000009906) #14	Zfp354c (ENSMSIG00000009873) #15	Adamts2 (ENSMSIG00000009833) #16	Rufy1 (ENSMSIG00000009787) #17	Hnrnph1 (ENSMSIG00000009749) #18	ENSMSIG00000009741 #19	Canx (ENSMSIG00000009706) #20	Maml1 (ENSMSIG00000009693) #22	Ltc4s (ENSMSIG00000009669)	Mgat4b (ENSMSIG00000009625) #24	Sqstm1 (ENSMSIG00000009550) #25	Mrnip (ENSMSIG00000009547) #26
Mouse	MODERN SPECIES	2	Or1ad1 (ENSMUSG00000061952) #7	Or1ad6 (ENSMUSG00000050343) #7	Prop1 (ENSMUSG00000044542) #9	4933414I15Rik (ENSMUSG00000072983)	Zfp354b (ENSMUSG00000020335) #10	Zfp2 (ENSMUSG00000049321) #11	Zfp454 (ENSMUSG00000048728) #12	Grm6 (ENSMUSG00000000617) #13	Zfp879 (ENSMUSG00000044296) #14	Zfp354c (ENSMUSG00000044807) #15	Adamts2 (ENSMUSG00000036545) #16	Rufy1 (ENSMUSG00000020375) #17	Hnrnph1 (ENSMUSG00000007850) #18	Cby3 (ENSMUSG00000050087) #19	Canx (ENSMUSG00000020368) #20	Maml1 (ENSMUSG00000050567) #22	Ltc4s (ENSMUSG00000020377)	Mgat4b (ENSMUSG00000036620) #24	Sqstm1 (ENSMUSG00000015837) #25	Mrnip (ENSMUSG00000020381) #26	Tbc1d9b (ENSMUSG00000036644) #27	Rnf130 (ENSMUSG00000020376) #29	Rasgef1c (ENSMUSG00000020374) #30	Mapk9 (ENSMUSG00000020366) #32	Gfpt2 (ENSMUSG00000020363) #33	Cnot6 (ENSMUSG00000020362) #34	Scgb3a1 (ENSMUSG00000064057) #35	Flt4 (ENSMUSG00000020357)	Or2y10 (ENSMUSG00000107645)	Or2y11 (ENSMUSG00000095187)	Or2y12 (ENSMUSG00000063827)
Ryukyu mouse	MODERN SPECIES	2	Or1ad6 (MGP_CAROLIEiJ_G0016302) #7	Prop1 (MGP_CAROLIEiJ_G0016301) #9	4933414I15Rik (MGP_CAROLIEiJ_G0016300)	Zfp354b (MGP_CAROLIEiJ_G0016299) #10	Zfp2 (MGP_CAROLIEiJ_G0016298) #11	Zfp454 (MGP_CAROLIEiJ_G0016297) #12	Grm6 (MGP_CAROLIEiJ_G0016296) #13	Zfp879 (MGP_CAROLIEiJ_G0016295) #14	Zfp354c (MGP_CAROLIEiJ_G0016294) #15	Adamts2 (MGP_CAROLIEiJ_G0016293) #16	Rufy1 (MGP_CAROLIEiJ_G0016292) #17	MGP_CAROLIEiJ_G0016291 #18	MGP_CAROLIEiJ_G0016290 #19	MGP_CAROLIEiJ_G0016289	Canx (MGP_CAROLIEiJ_G0016288) #20	Maml1 (MGP_CAROLIEiJ_G0016287) #22	Ltc4s (MGP_CAROLIEiJ_G0016286)	Mgat4b (MGP_CAROLIEiJ_G0016285) #24	Sqstm1 (MGP_CAROLIEiJ_G0016284) #25	Mrnip (MGP_CAROLIEiJ_G0016283) #26	Tbc1d9b (MGP_CAROLIEiJ_G0016282) #27	Rnf130 (MGP_CAROLIEiJ_G0016281) #29	Rasgef1c (MGP_CAROLIEiJ_G0016280) #30	Mapk9 (MGP_CAROLIEiJ_G0016279) #32	Gfpt2 (MGP_CAROLIEiJ_G0016278) #33	Cnot6 (MGP_CAROLIEiJ_G0016277) #34	Scgb3a1 (MGP_CAROLIEiJ_G0016276) #35	Flt4 (MGP_CAROLIEiJ_G0016275)	MGP_CAROLIEiJ_G0016274	MGP_CAROLIEiJ_G0016273	MGP_CAROLIEiJ_G0016272
Shrew mouse	MODERN SPECIES	5	Or1ad8 (MGP_PahariEiJ_G0017439) #7	Or1ad1 (MGP_PahariEiJ_G0017438) #7	Or1ad6 (MGP_PahariEiJ_G0017437) #7	Prop1 (MGP_PahariEiJ_G0017436) #9	Zfp354b (MGP_PahariEiJ_G0017434) #10	Zfp2 (MGP_PahariEiJ_G0017433) #11	Zfp454 (MGP_PahariEiJ_G0017432) #12	Grm6 (MGP_PahariEiJ_G0017431) #13	Zfp879 (MGP_PahariEiJ_G0017430) #14	Zfp354c (MGP_PahariEiJ_G0017429) #15	Adamts2 (MGP_PahariEiJ_G0017428) #16	Rufy1 (MGP_PahariEiJ_G0017427) #17	Hnrnph1 (MGP_PahariEiJ_G0017426) #18	Cby3 (MGP_PahariEiJ_G0017425) #19	Canx (MGP_PahariEiJ_G0017424) #20	Maml1 (MGP_PahariEiJ_G0017423) #22	MGP_PahariEiJ_G0017422 #23	Mgat4b (MGP_PahariEiJ_G0017421) #24	Sqstm1 (MGP_PahariEiJ_G0017420) #25	Mrnip (MGP_PahariEiJ_G0017419) #26	Tbc1d9b (MGP_PahariEiJ_G0017418) #27	Rnf130 (MGP_PahariEiJ_G0017417) #29	Rasgef1c (MGP_PahariEiJ_G0017416) #30	Mapk9 (MGP_PahariEiJ_G0017415) #32	Gfpt2 (MGP_PahariEiJ_G0017414) #33	Cnot6 (MGP_PahariEiJ_G0017413) #34	Scgb3a1 (MGP_PahariEiJ_G0017412) #35	Flt4 (MGP_PahariEiJ_G0017411)	MGP_PahariEiJ_G0017410	MGP_PahariEiJ_G0017409	Or2y15 (MGP_PahariEiJ_G0017408)
Rat	MODERN SPECIES	1	Or1ad5 (ENSRNOG00000029930) #7	Or1ad1 (ENSRNOG00000063756) #7	Or1ad6 (ENSRNOG00000003668) #7	Prop1 (ENSRNOG00000003671) #9	ENSRNOG00000067059	Zfp2 (ENSRNOG00000030750) #11	Znf454 (ENSRNOG00000029678) #10	Grm6 (ENSRNOG00000000233) #13	Zfp879 (ENSRNOG00000030517) #14	Zfp354c (ENSRNOG00000029205) #15	Adamts2 (ENSRNOG00000061484) #16	Rufy1 (ENSRNOG00000003536) #17	Hnrnph1 (ENSRNOG00000003399) #18	Cby3 (ENSRNOG00000066223) #19	Canx (ENSRNOG00000003343) #20	Maml1 (ENSRNOG00000003268) #22	Ltc4s (ENSRNOG00000003244)	Mgat4b (ENSRNOG00000003235) #24	Sqstm1 (ENSRNOG00000003147) #25	Mrnip (ENSRNOG00000003068) #26	Tbc1d9b (ENSRNOG00000003050) #27	Rnf130 (ENSRNOG00000046330) #29	Rasgef1c (ENSRNOG00000003005) #30	Mapk9 (ENSRNOG00000002823) #32	Gfpt2 (ENSRNOG00000002810) #33	Cnot6 (ENSRNOG00000054891) #34	Scgb3a1 (ENSRNOG00000002718) #35	Flt4 (ENSRNOG00000002511)	LOC102555091 (ENSRNOG00000068579) #37	Or2y11 (ENSRNOG00000065754)	Or2y12 (ENSRNOG00000070927)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1624					Prop1 (ENSNGAG00000016946) #9	Zfp2 (ENSNGAG00000015033) #11	Zfp454 (ENSNGAG00000001170) #12	Grm6 (ENSNGAG00000000051) #13	Zfp879 (ENSNGAG00000010850) #14	Zfp354c (ENSNGAG00000013055) #15	Adamts2 (ENSNGAG00000007774) #16	Rufy1 (ENSNGAG00000014023) #17	Hnrnph1 (ENSNGAG00000014666) #18	ENSNGAG00000019073 #19	Canx (ENSNGAG00000009718) #20	Maml1 (ENSNGAG00000007418) #22	ENSNGAG00000019905 #23	Mgat4b (ENSNGAG00000011567) #24	Sqstm1 (ENSNGAG00000000111) #25	Mrnip (ENSNGAG00000019013) #26	Tbc1d9b (ENSNGAG00000020655) #27	ENSNGAG00000013038	Rnf130 (ENSNGAG00000000237) #29	Rasgef1c (ENSNGAG00000020883) #30	Mapk9 (ENSNGAG00000019965) #32	Gfpt2 (ENSNGAG00000014610) #33	Cnot6 (ENSNGAG00000008269) #34	Scgb3a1 (ENSNGAG00000011521) #35	Flt4 (ENSNGAG00000013547)
Lesser Egyptian jerboa	MODERN SPECIES	133										Adamts2 (ENSJJAG00000001682) #16	ENSJJAG00000010190	Rufy1 (ENSJJAG00000013513) #17	Hnrnph1 (ENSJJAG00000016203) #18	ENSJJAG00000014052 #19	Canx (ENSJJAG00000022784) #20	Maml1 (ENSJJAG00000023847) #22	ENSJJAG00000019535 #23	Mgat4b (ENSJJAG00000021000) #24	ENSJJAG00000012040 #25	Mrnip (ENSJJAG00000010968) #26	Tbc1d9b (ENSJJAG00000013138) #27	ENSJJAG00000013685	Rnf130 (ENSJJAG00000014438) #29	Rasgef1c (ENSJJAG00000016338) #30	Mapk9 (ENSJJAG00000012308) #32	Gfpt2 (ENSJJAG00000014420) #33	Cnot6 (ENSJJAG00000012296) #34	Scgb3a1 (ENSJJAG00000011541) #35	Flt4 (ENSJJAG00000017737)	Sparc (ENSJJAG00000003597)	Fat2 (ENSJJAG00000019929)
Kangaroo rat	MODERN SPECIES	454	Phykpl (ENSDORG00000011023)	Col23a1 (ENSDORG00000011025)	ENSDORG00000024543	Clk4 (ENSDORG00000009760)	Zfp354a (ENSDORG00000009396)	Prop1 (ENSDORG00000009397) #9	Zfp454 (ENSDORG00000029196) #12	Grm6 (ENSDORG00000029560) #13	Zfp2 (ENSDORG00000005936) #11	Zfp354c (ENSDORG00000015602) #15	Adamts2 (ENSDORG00000015603) #16	Rufy1 (ENSDORG00000005452) #17	Hnrnph1 (ENSDORG00000005453) #18	ENSDORG00000024643 #19	Canx (ENSDORG00000002108) #20	Maml1 (ENSDORG00000023567) #22	ENSDORG00000025410 #23	Mgat4b (ENSDORG00000007019) #24	Sqstm1 (ENSDORG00000014852) #25	Tbc1d9b (ENSDORG00000014854) #27	Rnf130 (ENSDORG00000012990) #29	Rasgef1c (ENSDORG00000003918) #30	Mapk9 (ENSDORG00000003921) #32	Gfpt2 (ENSDORG00000003922) #33	Cnot6 (ENSDORG00000001708) #34	Scgb3a1 (ENSDORG00000027422) #35	Flt4 (ENSDORG00000012877)	ENSDORG00000024367	ENSDORG00000024307	ENSDORG00000023565	ENSDORG00000028273
Lagomorpha	ANCESTRAL SPECIES	511															ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22
Rabbit	MODERN SPECIES	160																MAML1 (ENSOCUG00000015101) #22
Pika	MODERN SPECIES	9453															CANX (ENSOPRG00000007562) #20	MAML1 (ENSOPRG00000007592) #22
Tree shrew	MODERN SPECIES	1184																ENSTBEG00000008651 #22
Primates	ANCESTRAL SPECIES	8	ENSGT00840000130327	ENSGT00940000161487	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00950000186148	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00970000194357.a #36
Strepsirrhini	ANCESTRAL SPECIES	5						ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a.k #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00950000186148	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00940000163029 #37
Lemuriformes	ANCESTRAL SPECIES	25	ENSGT00940000159977	ENSGT00390000018596.A.b	ENSGT00940000160536	ENSGT00390000013236	ENSGT00940000155271	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a.k #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00950000186148	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358
Mouse lemur	MODERN SPECIES	10	CIDEA (ENSMICG00000007492)	IMPA2 (ENSMICG00000004775)	ENSMICG00000001930	GNAL (ENSMICG00000001922)	ZNF454 (ENSMICG00000032054) #12	GRM6 (ENSMICG00000000566) #13	ZNF879 (ENSMICG00000033568) #14	ZNF354C (ENSMICG00000034512) #15	ADAMTS2 (ENSMICG00000010523) #16	RUFY1 (ENSMICG00000012324) #17	ENSMICG00000033979 #18	ENSMICG00000027131	CBY3 (ENSMICG00000036379) #19	CANX (ENSMICG00000003149) #20	ENSMICG00000007943	MAML1 (ENSMICG00000034960) #22	LTC4S (ENSMICG00000044735) #23	MGAT4B (ENSMICG00000006533) #24	SQSTM1 (ENSMICG00000006544) #25	ENSMICG00000002549 #26	TBC1D9B (ENSMICG00000036875) #27	RNF130 (ENSMICG00000043962) #29	MAPK9 (ENSMICG00000015900) #32	GFPT2 (ENSMICG00000015921) #33	ENSMICG00000013018 #34	SCGB3A1 (ENSMICG00000001211) #35	FLT4 (ENSMICG00000005770)	RBM47 (ENSMICG00000026417)	CHRNA9 (ENSMICG00000035894)	RHOH (ENSMICG00000027779)	ENSMICG00000038258
Lemuriformes_a	ANCESTRAL SPECIES	32	ENSGT00940000159977	ENSGT00390000018596.A.b	ENSGT00940000160536	ENSGT00390000013236	ENSGT00940000155271	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a.k #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00950000186148	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358
Greater bamboo lemur	MODERN SPECIES	376		CIDEA (ENSPSMG00000012085)	IMPA2 (ENSPSMG00000012070)	MPPE1 (ENSPSMG00000012056)	GNAL (ENSPSMG00000012017)	ZFP2 (ENSPSMG00000011924) #11	ZNF454 (ENSPSMG00000011918) #12	GRM6 (ENSPSMG00000011907) #13	ZNF879 (ENSPSMG00000011864) #14	ZNF354C (ENSPSMG00000011861) #15	ADAMTS2 (ENSPSMG00000011850) #16	RUFY1 (ENSPSMG00000011809) #17	HNRNPH1 (ENSPSMG00000011572) #18	CBY3 (ENSPSMG00000011344) #19	CANX (ENSPSMG00000011331) #20	MAML1 (ENSPSMG00000011314) #22	LTC4S (ENSPSMG00000011309) #23	MGAT4B (ENSPSMG00000011272) #24	SQSTM1 (ENSPSMG00000011174) #25	ENSPSMG00000011137 #26	TBC1D9B (ENSPSMG00000011075) #27	RNF130 (ENSPSMG00000010915) #29
Coquerels sifaka	MODERN SPECIES	816												RUFY1 (ENSPCOG00000002762) #17	HNRNPH1 (ENSPCOG00000016762) #18	CBY3 (ENSPCOG00000003073) #19	ENSPCOG00000015157 #20	MAML1 (ENSPCOG00000020980) #22	LTC4S (ENSPCOG00000019610) #23	MGAT4B (ENSPCOG00000014500) #24	SQSTM1 (ENSPCOG00000019361) #25	ENSPCOG00000013902	ENSPCOG00000018302 #26	TBC1D9B (ENSPCOG00000020338) #27
Bushbaby	MODERN SPECIES	261	AFAP1 (ENSOGAG00000009378)	ABLIM2 (ENSOGAG00000007881)	SH3TC1 (ENSOGAG00000007883)	HTRA3 (ENSOGAG00000025277)	ACOX3 (ENSOGAG00000002245)	TRMT44 (ENSOGAG00000002246)	CPZ (ENSOGAG00000002249)	HMX1 (ENSOGAG00000032103)	ADRA2C (ENSOGAG00000033833)	ZNF354C (ENSOGAG00000011077) #15	ADAMTS2 (ENSOGAG00000011081) #16	RUFY1 (ENSOGAG00000012620) #17	HNRNPH1 (ENSOGAG00000012631) #18	ENSOGAG00000029984 #19	CANX (ENSOGAG00000015727) #20	MAML1 (ENSOGAG00000024232) #22	LTC4S (ENSOGAG00000024180) #23	MGAT4B (ENSOGAG00000016831) #24	SQSTM1 (ENSOGAG00000002151) #25	MRNIP (ENSOGAG00000002152) #26	TBC1D9B (ENSOGAG00000009796) #27	RNF130 (ENSOGAG00000009805) #29	RASGEF1C (ENSOGAG00000016873) #30	MAPK9 (ENSOGAG00000016875) #32	GFPT2 (ENSOGAG00000016878) #33	CNOT6 (ENSOGAG00000032470) #34	SCGB3A1 (ENSOGAG00000001706) #35	FLT4 (ENSOGAG00000001707)	ENSOGAG00000028687 #37	ENSOGAG00000025685	ZNF354B (ENSOGAG00000027501) #10
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00840000130327	ENSGT00940000161487	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00970000194357.a #36	ENSGT01100000263486.a.b.a.a.a.a.a.a
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000161487	ENSGT00940000162330 #7	ENSGT00940000162292 #9	ENSGT00940000162570 #10	ENSGT00910000147061	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00970000194357.a #36	ENSGT01100000263486.a.b.a.a.a.a.a.a
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00910000147061	ENSGT00940000154944.e.b	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000183043.b.b	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #20	ENSGT01030000236180	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00940000174020	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00910000147177	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00940000156044.u.b	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000183043.b.b	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #20	ENSGT01030000236180	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00940000174020	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00910000147177	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358
Hominidae	ANCESTRAL SPECIES	7	ENSGT00940000156044.u.b	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000183043.b.b.m.a	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #20	ENSGT01030000236180	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a	ENSGT00530000063632.B
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000156044.u.b	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00950000183043.b.b.m.a	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #20	ENSGT01030000236180	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a	ENSGT00530000063632.B	ENSGT00940000162750
Gorilla	MODERN SPECIES	18	ENSGGOG00000043873	ENSGGOG00000044077	ZFP2 (ENSGGOG00000037928) #11	ZNF454 (ENSGGOG00000022508) #12	GRM6 (ENSGGOG00000011993) #13	ZNF879 (ENSGGOG00000023048) #14	ZNF354C (ENSGGOG00000014245) #15	ADAMTS2 (ENSGGOG00000000816) #16	ENSGGOG00000014985	ENSGGOG00000003557 #17	HNRNPH1 (ENSGGOG00000025844) #18	CBY3 (ENSGGOG00000012023) #19	CANX (ENSGGOG00000008450) #20	ENSGGOG00000026945	ENSGGOG00000040537	MAML1 (ENSGGOG00000028537) #22	LTC4S (ENSGGOG00000027355) #23	MGAT4B (ENSGGOG00000024066) #24	SQSTM1 (ENSGGOG00000026960) #25	MRNIP (ENSGGOG00000014962) #26	TBC1D9B (ENSGGOG00000003028) #27	ENSGGOG00000001137 #29	ENSGGOG00000028113	RASGEF1C (ENSGGOG00000003137) #30	MAPK9 (ENSGGOG00000016519) #32	GFPT2 (ENSGGOG00000010197) #33	CNOT6 (ENSGGOG00000003675) #34	SCGB3A1 (ENSGGOG00000009375) #35	FLT4 (ENSGGOG00000006749)	MGAT1 (ENSGGOG00000009610)	ZFP62 (ENSGGOG00000001217)
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000156044.u.b	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00950000183043.b.b.m.a	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #20	ENSGT01030000236180	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a	ENSGT00530000063632.B	ENSGT00940000162750
Pan	ANCESTRAL SPECIES	10	ENSGT00940000154944.e.b	ENSGT00940000167867	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00950000183043.b.b.m.a	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #20	ENSGT01030000236180	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a	ENSGT00530000063632.B	ENSGT00940000162750
Chimpanzee	MODERN SPECIES	18	ENSPTRG00000045160	ZFP2 (ENSPTRG00000023199) #11	ZNF454 (ENSPTRG00000017611) #12	GRM6 (ENSPTRG00000017612) #13	ZNF879 (ENSPTRG00000041282) #14	ZNF354C (ENSPTRG00000045846) #15	ADAMTS2 (ENSPTRG00000017614) #16	ENSPTRG00000028474	RUFY1 (ENSPTRG00000017616) #17	ENSPTRG00000051626 #18	ENSPTRG00000045474	CBY3 (ENSPTRG00000052485) #19	ENSPTRG00000051338	CANX (ENSPTRG00000017621) #20	ENSPTRG00000045963	MAML1 (ENSPTRG00000033932) #22	LTC4S (ENSPTRG00000017624) #23	MGAT4B (ENSPTRG00000017625) #24	SQSTM1 (ENSPTRG00000017626) #25	MRNIP (ENSPTRG00000017627) #26	TBC1D9B (ENSPTRG00000043585) #27	RNF130 (ENSPTRG00000017629) #29	RASGEF1C (ENSPTRG00000017631) #30	MAPK9 (ENSPTRG00000017633) #32	GFPT2 (ENSPTRG00000017635) #33	CNOT6 (ENSPTRG00000017636) #34	SCGB3A1 (ENSPTRG00000041205) #35	FLT4 (ENSPTRG00000017639)	OR2Y1 (ENSPTRG00000028465)	MGAT1 (ENSPTRG00000017642)	ZFP62 (ENSPTRG00000028464)
Bonobo	MODERN SPECIES	18	ZNF354B (ENSPPAG00000027268) #10	ENSPPAG00000031584	ZFP2 (ENSPPAG00000015238) #11	ZNF454 (ENSPPAG00000038343) #12	GRM6 (ENSPPAG00000036885) #13	ZNF879 (ENSPPAG00000030668) #14	ZNF354C (ENSPPAG00000041850) #15	ADAMTS2 (ENSPPAG00000026778) #16	ENSPPAG00000039363	RUFY1 (ENSPPAG00000029293) #17	ENSPPAG00000038325 #18	CBY3 (ENSPPAG00000043106) #19	ENSPPAG00000030033	CANX (ENSPPAG00000034073) #20	ENSPPAG00000034104	MAML1 (ENSPPAG00000005302) #22	ENSPPAG00000041541 #23	MGAT4B (ENSPPAG00000033457) #24	SQSTM1 (ENSPPAG00000034309) #25	MRNIP (ENSPPAG00000037015) #26	TBC1D9B (ENSPPAG00000039526) #27	RNF130 (ENSPPAG00000024806) #29	ENSPPAG00000041803 #30	MAPK9 (ENSPPAG00000038007) #32	GFPT2 (ENSPPAG00000028004) #33	CNOT6 (ENSPPAG00000032253) #34	ENSPPAG00000034711 #35	FLT4 (ENSPPAG00000042176)	OR2Y1 (ENSPPAG00000019437)	MGAT1 (ENSPPAG00000005759)	ZFP62 (ENSPPAG00000041640)
Human	MODERN SPECIES	17	COL23A1 (ENSG00000050767)	CLK4 (ENSG00000113240)	MSANTD5 (ENSG00000285891)	ZNF354A (ENSG00000169131)	ZNF354B (ENSG00000178338) #10	ZFP2 (ENSG00000198939) #11	ZNF454 (ENSG00000178187) #12	GRM6 (ENSG00000113262) #13	ZNF879 (ENSG00000234284) #14	ZNF354C (ENSG00000177932) #15	ADAMTS2 (ENSG00000087116) #16	RUFY1 (ENSG00000176783) #17	HNRNPH1 (ENSG00000169045) #18	CBY3 (ENSG00000204659) #19	CANX (ENSG00000127022) #20	MAML1 (ENSG00000161021) #22	LTC4S (ENSG00000213316) #23	MGAT4B (ENSG00000161013) #24	SQSTM1 (ENSG00000161011) #25	MRNIP (ENSG00000161010) #26	TBC1D9B (ENSG00000197226) #27	RNF130 (ENSG00000113269) #29	RASGEF1C (ENSG00000146090) #30	MAPK9 (ENSG00000050748) #32	GFPT2 (ENSG00000131459) #33	CNOT6 (ENSG00000113300) #34	SCGB3A1 (ENSG00000161055) #35	FLT4 (ENSG00000037280)	OR2Y1 (ENSG00000174339)	MGAT1 (ENSG00000131446)	ZFP62 (ENSG00000196670)
Orangutan	MODERN SPECIES	18	ENSPPYG00000016112	ZNF354B (ENSPPYG00000016113) #10	ZFP2 (ENSPPYG00000016115) #11	ZNF454 (ENSPPYG00000041561) #12	GRM6 (ENSPPYG00000016116) #13	ZNF879 (ENSPPYG00000029650) #14	ZNF354C (ENSPPYG00000016117) #15	ADAMTS2 (ENSPPYG00000016118) #16	ENSPPYG00000035848	RUFY1 (ENSPPYG00000016120) #17	ENSPPYG00000040835	ENSPPYG00000016121 #18	ENSPPYG00000031721	CANX (ENSPPYG00000016126) #20	CBY3 (ENSPPYG00000016124) #19	MAML1 (ENSPPYG00000016127) #22	LTC4S (ENSPPYG00000016128) #23	MGAT4B (ENSPPYG00000016129) #24	SQSTM1 (ENSPPYG00000016130) #25	MRNIP (ENSPPYG00000016131) #26	TBC1D9B (ENSPPYG00000016132) #27	RNF130 (ENSPPYG00000016133) #29	RASGEF1C (ENSPPYG00000016134) #30	MAPK9 (ENSPPYG00000016135) #32	GFPT2 (ENSPPYG00000016136) #33	CNOT6 (ENSPPYG00000016137) #34	ENSPPYG00000037258	ENSPPYG00000016138 #35	FLT4 (ENSPPYG00000016139)	MGAT1 (ENSPPYG00000016140)	ZFP62 (ENSPPYG00000016141)
Gibbon	MODERN SPECIES	11	CLK4 (ENSNLEG00000015794)	ZNF354B (ENSNLEG00000001411) #10	ENSNLEG00000031458	ENSNLEG00000001427	ZFP2 (ENSNLEG00000001415) #11	ZNF454 (ENSNLEG00000001430) #12	GRM6 (ENSNLEG00000001434) #13	ZNF879 (ENSNLEG00000001439) #14	ZNF354C (ENSNLEG00000001445) #15	ENSNLEG00000001449 #16	RUFY1 (ENSNLEG00000001488) #17	ENSNLEG00000026658 #18	CBY3 (ENSNLEG00000001503) #19	ENSNLEG00000035116	CANX (ENSNLEG00000001508) #20	MAML1 (ENSNLEG00000001678) #22	ENSNLEG00000001697 #23	MGAT4B (ENSNLEG00000001699) #24	ENSNLEG00000033839	ENSNLEG00000001801 #25	MRNIP (ENSNLEG00000001806) #26	TBC1D9B (ENSNLEG00000001836) #27	ENSNLEG00000001941 #29	RASGEF1C (ENSNLEG00000001943) #30	MAPK9 (ENSNLEG00000001965) #32	GFPT2 (ENSNLEG00000002178) #33	ENSNLEG00000031368	CNOT6 (ENSNLEG00000002322) #34	ENSNLEG00000027996	SCGB3A1 (ENSNLEG00000002365) #35	FLT4 (ENSNLEG00000002370)
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00940000154944.e.b	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000183043.b.b	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #20	ENSGT01030000236180	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00940000174020	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00910000147177	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000183043.b.a.g.a	ENSGT00950000183043.b.b	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #20	ENSGT01030000236180	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00940000174020	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00910000147177	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358
Vervet Monkey	MODERN SPECIES	15	PHYKPL (ENSCSAG00000008619)	CLK4 (ENSCSAG00000008600)	ZNF354A (ENSCSAG00000008589)	ZNF354B (ENSCSAG00000008583) #10	ZFP2 (ENSCSAG00000008564) #11	ZNF454 (ENSCSAG00000008562) #12	GRM6 (ENSCSAG00000008547) #13	ZNF879 (ENSCSAG00000008491) #14	ZNF354C (ENSCSAG00000008484) #15	ADAMTS2 (ENSCSAG00000008473) #16	RUFY1 (ENSCSAG00000008458) #17	HNRNPH1 (ENSCSAG00000008415) #18	ENSCSAG00000008405	CBY3 (ENSCSAG00000008395) #19	CANX (ENSCSAG00000008385) #20	MAML1 (ENSCSAG00000008369) #22	LTC4S (ENSCSAG00000008363) #23	MGAT4B (ENSCSAG00000008346) #24	SQSTM1 (ENSCSAG00000008334) #25	MRNIP (ENSCSAG00000008324) #26	TBC1D9B (ENSCSAG00000008307) #27	RNF130 (ENSCSAG00000008295) #29	RASGEF1C (ENSCSAG00000008274) #30	MAPK9 (ENSCSAG00000008264) #32	GFPT2 (ENSCSAG00000008225) #33	CNOT6 (ENSCSAG00000008165) #34	SCGB3A1 (ENSCSAG00000008157) #35	FLT4 (ENSCSAG00000008130)	MGAT1 (ENSCSAG00000019727)	ZFP62 (ENSCSAG00000008052)	BTNL8 (ENSCSAG00000008045)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00910000147061	ENSGT00940000154944.e.b	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #20	ENSGT01030000236180	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00940000174020	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00910000147177	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00940000162570 #10	ENSGT00910000147061	ENSGT00940000154944.e.b	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00940000174020	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00910000147177	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358
Olive baboon	MODERN SPECIES	15	COL23A1 (ENSPANG00000006848)	CLK4 (ENSPANG00000014774)	MSANTD5 (ENSPANG00000042990)	ZNF354A (ENSPANG00000032762)	ZNF354B (ENSPANG00000002751) #10	ZNF454 (ENSPANG00000009509) #12	GRM6 (ENSPANG00000006031) #13	ZNF879 (ENSPANG00000032345) #14	ADAMTS2 (ENSPANG00000005312) #16	ENSPANG00000049297	ENSPANG00000040974	RUFY1 (ENSPANG00000019170) #17	HNRNPH1 (ENSPANG00000013058) #18	CBY3 (ENSPANG00000012012) #19	CANX (ENSPANG00000013567) #20	MAML1 (ENSPANG00000009297) #22	ENSPANG00000044272 #23	MGAT4B (ENSPANG00000009339) #24	ENSPANG00000038696	SQSTM1 (ENSPANG00000012011) #25	MRNIP (ENSPANG00000002750) #26	TBC1D9B (ENSPANG00000003016) #27	RNF130 (ENSPANG00000030752) #29	RASGEF1C (ENSPANG00000003726) #30	MAPK9 (ENSPANG00000013251) #32	GFPT2 (ENSPANG00000016006) #33	CNOT6 (ENSPANG00000016191) #34	ENSPANG00000029867	SCGB3A1 (ENSPANG00000032680) #35	FLT4 (ENSPANG00000016325)	ENSPANG00000050685
Cercopithecinae_d	ANCESTRAL SPECIES	115	ENSGT00940000162570 #10	ENSGT00910000147061	ENSGT00940000154944.e.b	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00910000147177	ENSGT00940000158978 #34	ENSGT00900000143807	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT00970000194357.a #36
Sooty mangabey	MODERN SPECIES	157	ENSCATG00000020646	ENSCATG00000025765	ZFP2 (ENSCATG00000029817) #11	ZNF454 (ENSCATG00000031926) #12	GRM6 (ENSCATG00000042346) #13	ZNF879 (ENSCATG00000029400) #14	ZNF354C (ENSCATG00000039049) #15	ADAMTS2 (ENSCATG00000024805) #16	RUFY1 (ENSCATG00000012248) #17	HNRNPH1 (ENSCATG00000034747) #18	ENSCATG00000037633	ENSCATG00000039249	CBY3 (ENSCATG00000038136) #19	ENSCATG00000030870	CANX (ENSCATG00000024926) #20	MAML1 (ENSCATG00000035850) #22	MGAT4B (ENSCATG00000021105) #24	LTC4S (ENSCATG00000029442) #23	SQSTM1 (ENSCATG00000034356) #25	MRNIP (ENSCATG00000038409) #26	TBC1D9B (ENSCATG00000037328) #27	RNF130 (ENSCATG00000039524) #29	RASGEF1C (ENSCATG00000010154) #30	ENSCATG00000000228	MAPK9 (ENSCATG00000033689) #32	GFPT2 (ENSCATG00000033682) #33	ENSCATG00000034666	CNOT6 (ENSCATG00000042014) #34	ENSCATG00000037590	SCGB3A1 (ENSCATG00000035525) #35	FLT4 (ENSCATG00000035362)
Drill	MODERN SPECIES	603	ZNF354A (ENSMLEG00000038806)	ENSMLEG00000043968	ZNF354B (ENSMLEG00000037960) #10	ENSMLEG00000003410	ZFP2 (ENSMLEG00000014884) #11	ZNF454 (ENSMLEG00000039955) #12	GRM6 (ENSMLEG00000031526) #13	ZNF879 (ENSMLEG00000044457) #14	ZNF354C (ENSMLEG00000029929) #15	ADAMTS2 (ENSMLEG00000037514) #16	RUFY1 (ENSMLEG00000042265) #17	ENSMLEG00000040142 #18	ENSMLEG00000027731	CBY3 (ENSMLEG00000028373) #19	CANX (ENSMLEG00000041092) #20	MAML1 (ENSMLEG00000033787) #22	LTC4S (ENSMLEG00000039124) #23	MGAT4B (ENSMLEG00000030238) #24	SQSTM1 (ENSMLEG00000037546) #25	MRNIP (ENSMLEG00000041022) #26	TBC1D9B (ENSMLEG00000029660) #27	RNF130 (ENSMLEG00000044175) #29	RASGEF1C (ENSMLEG00000034495) #30	MAPK9 (ENSMLEG00000027658) #32	GFPT2 (ENSMLEG00000040967) #33	ENSMLEG00000039942	CNOT6 (ENSMLEG00000010555) #34	FLT4 (ENSMLEG00000028787)	ENSMLEG00000029740 #36	MGAT1 (ENSMLEG00000000882)	ZFP62 (ENSMLEG00000011033)
Macaca	ANCESTRAL SPECIES	7	ENSGT00940000162570 #10	ENSGT00910000147061	ENSGT00940000154944.e.b	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT01030000236180	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00910000147177	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a	ENSGT00530000063632.B
Pig-tailed macaque	MODERN SPECIES	591	ENSMNEG00000041417	ZFP2 (ENSMNEG00000038326) #11	ZNF454 (ENSMNEG00000002699) #12	GRM6 (ENSMNEG00000044389) #13	ZNF879 (ENSMNEG00000030724) #14	ZNF354C (ENSMNEG00000034678) #15	ADAMTS2 (ENSMNEG00000032393) #16	RUFY1 (ENSMNEG00000036092) #17	HNRNPH1 (ENSMNEG00000032375) #18	ENSMNEG00000044166	CBY3 (ENSMNEG00000037134) #19	ENSMNEG00000004160	ENSMNEG00000033462	CANX (ENSMNEG00000038823) #20	ENSMNEG00000020821	MAML1 (ENSMNEG00000031843) #22	LTC4S (ENSMNEG00000042676) #23	MGAT4B (ENSMNEG00000042915) #24	SQSTM1 (ENSMNEG00000021850) #25	MRNIP (ENSMNEG00000032717) #26	TBC1D9B (ENSMNEG00000036227) #27	RNF130 (ENSMNEG00000030254) #29	RASGEF1C (ENSMNEG00000040323) #30	MAPK9 (ENSMNEG00000041405) #32	GFPT2 (ENSMNEG00000030936) #33	ENSMNEG00000002473	CNOT6 (ENSMNEG00000038565) #34	SCGB3A1 (ENSMNEG00000041974) #35	FLT4 (ENSMNEG00000030424)	OR2Y1 (ENSMNEG00000026132)	MGAT1 (ENSMNEG00000013091)
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00840000130327	ENSGT00940000161487	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT01030000236180	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #35	ENSGT00940000159358	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a	ENSGT00530000063632.B	ENSGT00940000162750
Crab-eating macaque	MODERN SPECIES	16	CLK4 (ENSMFAG00000040140)	MSANTD5 (ENSMFAG00000055801)	ZNF354A (ENSMFAG00000013407)	ZNF354B (ENSMFAG00000029623) #10	ZFP2 (ENSMFAG00000014508) #11	ZNF454 (ENSMFAG00000043337) #12	GRM6 (ENSMFAG00000002639) #13	ENSMFAG00000050028	ZNF879 (ENSMFAG00000039136) #14	ADAMTS2 (ENSMFAG00000002799) #16	RUFY1 (ENSMFAG00000033376) #17	HNRNPH1 (ENSMFAG00000028267) #18	ENSMFAG00000033075	CANX (ENSMFAG00000031934) #20	CBY3 (ENSMFAG00000042944) #19	MAML1 (ENSMFAG00000044212) #22	ENSMFAG00000043066 #23	MGAT4B (ENSMFAG00000029205) #24	SQSTM1 (ENSMFAG00000032992) #25	MRNIP (ENSMFAG00000040511) #26	TBC1D9B (ENSMFAG00000000062) #27	RNF130 (ENSMFAG00000019863) #29	ENSMFAG00000061594	ENSMFAG00000065456	MAPK9 (ENSMFAG00000042461) #32	GFPT2 (ENSMFAG00000045396) #33	ENSMFAG00000054397	CNOT6 (ENSMFAG00000030867) #34	SCGB3A1 (ENSMFAG00000040059) #35	FLT4 (ENSMFAG00000033698)	OR2Y1 (ENSMFAG00000030133)
Rhesus	MODERN SPECIES	16	CLK4 (ENSMMUG00000004002)	MSANTD5 (ENSMMUG00000050539)	ZNF354A (ENSMMUG00000041519)	ZNF354B (ENSMMUG00000008976) #10	ZFP2 (ENSMMUG00000008978) #11	ZNF354C (ENSMMUG00000002485) #15	GRM6 (ENSMMUG00000017587) #13	ADAMTS2 (ENSMMUG00000002488) #16	RUFY1 (ENSMMUG00000018666) #17	HNRNPH1 (ENSMMUG00000010843) #18	ENSMMUG00000063082	CBY3 (ENSMMUG00000043680) #19	ENSMMUG00000058524	CANX (ENSMMUG00000012370) #20	ENSMMUG00000050372	MAML1 (ENSMMUG00000012371) #22	LTC4S (ENSMMUG00000012373) #23	MGAT4B (ENSMMUG00000012374) #24	SQSTM1 (ENSMMUG00000021055) #25	MRNIP (ENSMMUG00000021056) #26	TBC1D9B (ENSMMUG00000021057) #27	RNF130 (ENSMMUG00000013347) #29	RASGEF1C (ENSMMUG00000000635) #30	MAPK9 (ENSMMUG00000001728) #32	GFPT2 (ENSMMUG00000001731) #33	CNOT6 (ENSMMUG00000018690) #34	SCGB3A1 (ENSMMUG00000018692) #35	FLT4 (ENSMMUG00000018693)	OR2Y1 (ENSMMUG00000009136)	MGAT1 (ENSMMUG00000047880)	ZFP62 (ENSMMUG00000042832)
Rhinopithecus	ANCESTRAL SPECIES	447													ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32
Golden snub-nosed monkey	MODERN SPECIES	2239	ZNF354B (ENSRROG00000029239) #10	ENSRROG00000021202	ENSRROG00000045092	ZFP2 (ENSRROG00000038496) #11	ZNF454 (ENSRROG00000029318) #12	GRM6 (ENSRROG00000044108) #13	ZNF879 (ENSRROG00000030257) #14	ZNF354C (ENSRROG00000039027) #15	ADAMTS2 (ENSRROG00000041064) #16	RUFY1 (ENSRROG00000041055) #17	ENSRROG00000035613 #18	ENSRROG00000027548	ENSRROG00000036327	CBY3 (ENSRROG00000034035) #19	CANX (ENSRROG00000034381) #20	MAML1 (ENSRROG00000039755) #22	LTC4S (ENSRROG00000033957) #23	MGAT4B (ENSRROG00000038612) #24	SQSTM1 (ENSRROG00000036129) #25	MRNIP (ENSRROG00000030855) #26	TBC1D9B (ENSRROG00000043130) #27	RNF130 (ENSRROG00000017609) #29	ENSRROG00000038764	RASGEF1C (ENSRROG00000026189) #30	MAPK9 (ENSRROG00000027518) #32
Black snub-nosed monkey	MODERN SPECIES	2515													ENSRBIG00000031883	CBY3 (ENSRBIG00000027813) #19	CANX (ENSRBIG00000020901) #20	MAML1 (ENSRBIG00000044794) #22	LTC4S (ENSRBIG00000043907) #23	MGAT4B (ENSRBIG00000044569) #24	SQSTM1 (ENSRBIG00000040424) #25	MRNIP (ENSRBIG00000010959) #26	TBC1D9B (ENSRBIG00000034540) #27	RNF130 (ENSRBIG00000042845) #29	RASGEF1C (ENSRBIG00000038870) #30
Platyrrhini	ANCESTRAL SPECIES	19	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000154173.A.a.b	ENSGT00940000159358	ENSGT00420000029848.A #35	ENSGT00900000143807	ENSGT00940000158978 #34	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33	ENSGT00940000162292 #9	ENSGT00940000162330 #7	ENSGT00940000161487	ENSGT00940000160245	ENSGT00940000162238	ENSGT00940000159222
Cebidae	ANCESTRAL SPECIES	47	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000154173.A.a.b	ENSGT00940000159358	ENSGT00420000029848.A #35	ENSGT00900000143807	ENSGT00940000158978 #34	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33
Cebidae_a	ANCESTRAL SPECIES	113	ENSGT00940000162570 #10	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000154173.A.a.b	ENSGT00940000159358	ENSGT00420000029848.A #35	ENSGT00940000158978 #34	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #25	ENSGT00390000006124 #26	ENSGT00940000158554 #27	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #32	ENSGT00940000156413 #33
Bolivian squirrel monkey	MODERN SPECIES	237	ZFP2 (ENSSBOG00000020675) #11	ZNF454 (ENSSBOG00000028339) #12	GRM6 (ENSSBOG00000024819) #13	ZNF879 (ENSSBOG00000022474) #14	ZNF354C (ENSSBOG00000015814) #15	ADAMTS2 (ENSSBOG00000025193) #16	ENSSBOG00000025755	FLT4 (ENSSBOG00000031031)	SCGB3A1 (ENSSBOG00000027262) #35	ENSSBOG00000027641	CNOT6 (ENSSBOG00000030494) #34	RUFY1 (ENSSBOG00000031721) #17	HNRNPH1 (ENSSBOG00000022306) #18	CBY3 (ENSSBOG00000023009) #19	CANX (ENSSBOG00000034866) #20	MAML1 (ENSSBOG00000021790) #22	ENSSBOG00000028968 #23	ENSSBOG00000014015 #24	SQSTM1 (ENSSBOG00000024318) #25	MRNIP (ENSSBOG00000023818) #26	TBC1D9B (ENSSBOG00000027386) #27	ENSSBOG00000027608	RNF130 (ENSSBOG00000023510) #29	ENSSBOG00000021880	RASGEF1C (ENSSBOG00000030445) #30	MAPK9 (ENSSBOG00000019251) #32	GFPT2 (ENSSBOG00000019062) #33
Capuchin	MODERN SPECIES	623													ENSCCAG00000027696	CBY3 (ENSCCAG00000031282) #19	CANX (ENSCCAG00000029294) #20	MAML1 (ENSCCAG00000028130) #22	LTC4S (ENSCCAG00000026797) #23	MGAT4B (ENSCCAG00000035998) #24	SQSTM1 (ENSCCAG00000034206) #25	MRNIP (ENSCCAG00000028973) #26	TBC1D9B (ENSCCAG00000033711) #27	RNF130 (ENSCCAG00000034314) #29	ENSCCAG00000026775	ENSCCAG00000028190	RASGEF1C (ENSCCAG00000024499) #30	MAPK9 (ENSCCAG00000038038) #32	ENSCCAG00000036076	GFPT2 (ENSCCAG00000030175) #33
Marmoset	MODERN SPECIES	11	ZFP62 (ENSCJAG00000018839)	MGAT1 (ENSCJAG00000046208)	ZNF354B (ENSCJAG00000018848) #10	ZNF454 (ENSCJAG00000018857) #12	GRM6 (ENSCJAG00000018865) #13	ZNF879 (ENSCJAG00000018904) #14	ZNF354C (ENSCJAG00000086065) #15	ADAMTS2 (ENSCJAG00000018919) #16	FLT4 (ENSCJAG00000009696)	SCGB3A1 (ENSCJAG00000009787) #35	ENSCJAG00000043414	CNOT6 (ENSCJAG00000009795) #34	RUFY1 (ENSCJAG00000009844) #17	ENSCJAG00000009931 #18	CANX (ENSCJAG00000009989) #20	MAML1 (ENSCJAG00000048349) #22	LTC4S (ENSCJAG00000010116) #23	MGAT4B (ENSCJAG00000010124) #24	SQSTM1 (ENSCJAG00000010152) #25	MRNIP (ENSCJAG00000010163) #26	TBC1D9B (ENSCJAG00000010170) #27	RNF130 (ENSCJAG00000010215) #29	RASGEF1C (ENSCJAG00000010277) #30	ENSCJAG00000044504	MAPK9 (ENSCJAG00000010293) #32	GFPT2 (ENSCJAG00000010359) #33	SIMC1 (ENSCJAG00000012354)	KIAA1191 (ENSCJAG00000012337)	ARL10 (ENSCJAG00000012332)	NOP16 (ENSCJAG00000057017)	ENSCJAG00000084164
Mas night monkey	MODERN SPECIES	911	ZNF454 (ENSANAG00000037002) #12	GRM6 (ENSANAG00000032011) #13	ZNF354C (ENSANAG00000021816) #15	ADAMTS2 (ENSANAG00000032180) #16	ENSANAG00000027694	FLT4 (ENSANAG00000030669)	SCGB3A1 (ENSANAG00000025025) #35	CNOT6 (ENSANAG00000030436) #34	ENSANAG00000013483	ENSANAG00000028928	ENSANAG00000030413	RUFY1 (ENSANAG00000031581) #17	HNRNPH1 (ENSANAG00000035312) #18	CBY3 (ENSANAG00000024701) #19	CANX (ENSANAG00000025740) #20	MAML1 (ENSANAG00000037400) #22	LTC4S (ENSANAG00000024498) #23	MGAT4B (ENSANAG00000036256) #24	SQSTM1 (ENSANAG00000036320) #25	MRNIP (ENSANAG00000030629) #26	TBC1D9B (ENSANAG00000033570) #27	RNF130 (ENSANAG00000033140) #29	RASGEF1C (ENSANAG00000036683) #30	MAPK9 (ENSANAG00000024448) #32	GFPT2 (ENSANAG00000025129) #33	PROP1 (ENSANAG00000033421) #9	ZNF354A (ENSANAG00000022081)	CLK4 (ENSANAG00000022160)	COL23A1 (ENSANAG00000037234)	PHYKPL (ENSANAG00000035175)	ENSANAG00000026991
Tarsier	MODERN SPECIES	2078															CANX (ENSTSYG00000031071) #20	MAML1 (ENSTSYG00000027426) #22