Tetrapoda	ANCESTRAL SPECIES	27	ENSGT00940000159725	ENSGT00940000162232	ENSGT00940000156683	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000160487	ENSGT00940000165542	ENSGT00940000160541	ENSGT00510000046732.B	ENSGT00940000158869	ENSGT00940000164810	ENSGT00940000155521	ENSGT00390000002137	ENSGT00940000160403	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000153137.a.b #19	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178460	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a
Amniota	ANCESTRAL SPECIES	17	ENSGT00940000159222	ENSGT00940000159308	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00990000206303	ENSGT00390000017909	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153503.b ##18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178460	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000162069
Mammalia	ANCESTRAL SPECIES	30	ENSGT00550000074939	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000162238	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153503.b ##18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178460	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00970000194357.a	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000162069
Theria	ANCESTRAL SPECIES	18	ENSGT00940000153203.A.a	ENSGT00550000074939	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000162238	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.b ##18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178460	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00970000194357.a
Eutheria	ANCESTRAL SPECIES	6							ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178460	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00940000162292
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000178460	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Primates	ANCESTRAL SPECIES	8	ENSGT00840000130327	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00970000194357.a
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00840000130327	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00970000194357.a	ENSGT01100000263486.a.b.a.a.a.a.a.a
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00910000147061	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00970000194357.a	ENSGT01100000263486.a.b.a.a.a.a.a.a
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00910000147061	ENSGT00940000154944.e.b #9	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000183043.b.b	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #21	ENSGT01030000236180 #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00940000174020 #25	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00910000147177 #33	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00940000156044.u.b	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000183043.b.b	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #21	ENSGT01030000236180 #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00940000174020 #25	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00910000147177 #33	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Gibbon	MODERN SPECIES	11	CLK4 (ENSNLEG00000015794) #7	ZNF354B (ENSNLEG00000001411) #8	ENSNLEG00000031458 #9	ENSNLEG00000001427 #10	ZFP2 (ENSNLEG00000001415) #11	ZNF454 (ENSNLEG00000001430) #12	GRM6 (ENSNLEG00000001434) #13	ZNF879 (ENSNLEG00000001439) #14	ZNF354C (ENSNLEG00000001445) #15	ENSNLEG00000001449 #16	RUFY1 (ENSNLEG00000001488) #17	ENSNLEG00000026658 #18	CBY3 (ENSNLEG00000001503) #19	ENSNLEG00000035116 #20	CANX (ENSNLEG00000001508) #21	MAML1 (ENSNLEG00000001678) #22	ENSNLEG00000001697 #23	MGAT4B (ENSNLEG00000001699) #24	ENSNLEG00000033839 #25	ENSNLEG00000001801 #26	MRNIP (ENSNLEG00000001806) #27	TBC1D9B (ENSNLEG00000001836) #28	ENSNLEG00000001941 #29	RASGEF1C (ENSNLEG00000001943) #30	MAPK9 (ENSNLEG00000001965) #31	GFPT2 (ENSNLEG00000002178) #32	ENSNLEG00000031368 #33	CNOT6 (ENSNLEG00000002322) #34	ENSNLEG00000027996 #35	SCGB3A1 (ENSNLEG00000002365) #36	FLT4 (ENSNLEG00000002370) #37
Hominidae	ANCESTRAL SPECIES	7	ENSGT00940000156044.u.b	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000183043.b.b.m.a	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #21	ENSGT01030000236180 #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a	ENSGT00530000063632.B
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000156044.u.b	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00950000183043.b.b.m.a	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #21	ENSGT01030000236180 #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a	ENSGT00530000063632.B	ENSGT00940000162750
Gorilla	MODERN SPECIES	18	ENSGGOG00000043873	ENSGGOG00000044077	ZFP2 (ENSGGOG00000037928) #11	ZNF454 (ENSGGOG00000022508) #12	GRM6 (ENSGGOG00000011993) #13	ZNF879 (ENSGGOG00000023048) #14	ZNF354C (ENSGGOG00000014245) #15	ADAMTS2 (ENSGGOG00000000816) #16	ENSGGOG00000014985	ENSGGOG00000003557 #17	HNRNPH1 (ENSGGOG00000025844) #18	CBY3 (ENSGGOG00000012023) #19	CANX (ENSGGOG00000008450) #21	ENSGGOG00000026945	ENSGGOG00000040537 #20	MAML1 (ENSGGOG00000028537) #22	LTC4S (ENSGGOG00000027355) #23	MGAT4B (ENSGGOG00000024066) #24	SQSTM1 (ENSGGOG00000026960) #26	MRNIP (ENSGGOG00000014962) #27	TBC1D9B (ENSGGOG00000003028) #28	ENSGGOG00000001137 #29	ENSGGOG00000028113	RASGEF1C (ENSGGOG00000003137) #30	MAPK9 (ENSGGOG00000016519) #31	GFPT2 (ENSGGOG00000010197) #32	CNOT6 (ENSGGOG00000003675) #34	SCGB3A1 (ENSGGOG00000009375) #36	FLT4 (ENSGGOG00000006749) #37	MGAT1 (ENSGGOG00000009610)	ZFP62 (ENSGGOG00000001217)
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000156044.u.b	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00950000183043.b.b.m.a	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #21	ENSGT01030000236180 #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a	ENSGT00530000063632.B	ENSGT00940000162750
Pan	ANCESTRAL SPECIES	10	ENSGT00940000154944.e.b #9	ENSGT00940000167867	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00950000183043.b.b.m.a	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #21	ENSGT01030000236180 #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a	ENSGT00530000063632.B	ENSGT00940000162750
Chimpanzee	MODERN SPECIES	18	ENSPTRG00000045160	ZFP2 (ENSPTRG00000023199) #11	ZNF454 (ENSPTRG00000017611) #12	GRM6 (ENSPTRG00000017612) #13	ZNF879 (ENSPTRG00000041282) #14	ZNF354C (ENSPTRG00000045846) #15	ADAMTS2 (ENSPTRG00000017614) #16	ENSPTRG00000028474	RUFY1 (ENSPTRG00000017616) #17	ENSPTRG00000051626 #18	ENSPTRG00000045474	CBY3 (ENSPTRG00000052485) #19	ENSPTRG00000051338	CANX (ENSPTRG00000017621) #21	ENSPTRG00000045963 #20	MAML1 (ENSPTRG00000033932) #22	LTC4S (ENSPTRG00000017624) #23	MGAT4B (ENSPTRG00000017625) #24	SQSTM1 (ENSPTRG00000017626) #26	MRNIP (ENSPTRG00000017627) #27	TBC1D9B (ENSPTRG00000043585) #28	RNF130 (ENSPTRG00000017629) #29	RASGEF1C (ENSPTRG00000017631) #30	MAPK9 (ENSPTRG00000017633) #31	GFPT2 (ENSPTRG00000017635) #32	CNOT6 (ENSPTRG00000017636) #34	SCGB3A1 (ENSPTRG00000041205) #36	FLT4 (ENSPTRG00000017639) #37	OR2Y1 (ENSPTRG00000028465)	MGAT1 (ENSPTRG00000017642)	ZFP62 (ENSPTRG00000028464)
Bonobo	MODERN SPECIES	18	ZNF354B (ENSPPAG00000027268) #8	ENSPPAG00000031584 #10	ZFP2 (ENSPPAG00000015238) #11	ZNF454 (ENSPPAG00000038343) #12	GRM6 (ENSPPAG00000036885) #13	ZNF879 (ENSPPAG00000030668) #14	ZNF354C (ENSPPAG00000041850) #15	ADAMTS2 (ENSPPAG00000026778) #16	ENSPPAG00000039363	RUFY1 (ENSPPAG00000029293) #17	ENSPPAG00000038325 #18	CBY3 (ENSPPAG00000043106) #19	ENSPPAG00000030033	CANX (ENSPPAG00000034073) #21	ENSPPAG00000034104 #20	MAML1 (ENSPPAG00000005302) #22	ENSPPAG00000041541 #23	MGAT4B (ENSPPAG00000033457) #24	SQSTM1 (ENSPPAG00000034309) #26	MRNIP (ENSPPAG00000037015) #27	TBC1D9B (ENSPPAG00000039526) #28	RNF130 (ENSPPAG00000024806) #29	ENSPPAG00000041803 #30	MAPK9 (ENSPPAG00000038007) #31	GFPT2 (ENSPPAG00000028004) #32	CNOT6 (ENSPPAG00000032253) #34	ENSPPAG00000034711 #36	FLT4 (ENSPPAG00000042176) #37	OR2Y1 (ENSPPAG00000019437)	MGAT1 (ENSPPAG00000005759)	ZFP62 (ENSPPAG00000041640)
Human	MODERN SPECIES	17	COL23A1 (ENSG00000050767)	CLK4 (ENSG00000113240) #7	MSANTD5 (ENSG00000285891)	ZNF354A (ENSG00000169131)	ZNF354B (ENSG00000178338) #8	ZFP2 (ENSG00000198939) #11	ZNF454 (ENSG00000178187) #12	GRM6 (ENSG00000113262) #13	ZNF879 (ENSG00000234284) #14	ZNF354C (ENSG00000177932) #15	ADAMTS2 (ENSG00000087116) #16	RUFY1 (ENSG00000176783) #17	HNRNPH1 (ENSG00000169045) #18	CBY3 (ENSG00000204659) #19	CANX (ENSG00000127022) #21	MAML1 (ENSG00000161021) #22	LTC4S (ENSG00000213316) #23	MGAT4B (ENSG00000161013) #24	SQSTM1 (ENSG00000161011) #26	MRNIP (ENSG00000161010) #27	TBC1D9B (ENSG00000197226) #28	RNF130 (ENSG00000113269) #29	RASGEF1C (ENSG00000146090) #30	MAPK9 (ENSG00000050748) #31	GFPT2 (ENSG00000131459) #32	CNOT6 (ENSG00000113300) #34	SCGB3A1 (ENSG00000161055) #36	FLT4 (ENSG00000037280) #37	OR2Y1 (ENSG00000174339)	MGAT1 (ENSG00000131446)	ZFP62 (ENSG00000196670)
Orangutan	MODERN SPECIES	18	ENSPPYG00000016112	ZNF354B (ENSPPYG00000016113) #8	ZFP2 (ENSPPYG00000016115) #11	ZNF454 (ENSPPYG00000041561) #12	GRM6 (ENSPPYG00000016116) #13	ZNF879 (ENSPPYG00000029650) #14	ZNF354C (ENSPPYG00000016117) #15	ADAMTS2 (ENSPPYG00000016118) #16	ENSPPYG00000035848	RUFY1 (ENSPPYG00000016120) #17	ENSPPYG00000040835	ENSPPYG00000016121 #18	ENSPPYG00000031721	CANX (ENSPPYG00000016126) #21	CBY3 (ENSPPYG00000016124) #19	MAML1 (ENSPPYG00000016127) #22	LTC4S (ENSPPYG00000016128) #23	MGAT4B (ENSPPYG00000016129) #24	SQSTM1 (ENSPPYG00000016130) #26	MRNIP (ENSPPYG00000016131) #27	TBC1D9B (ENSPPYG00000016132) #28	RNF130 (ENSPPYG00000016133) #29	RASGEF1C (ENSPPYG00000016134) #30	MAPK9 (ENSPPYG00000016135) #31	GFPT2 (ENSPPYG00000016136) #32	CNOT6 (ENSPPYG00000016137) #34	ENSPPYG00000037258 #35	ENSPPYG00000016138 #36	FLT4 (ENSPPYG00000016139) #37	MGAT1 (ENSPPYG00000016140)	ZFP62 (ENSPPYG00000016141)
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00940000154944.e.b #9	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000183043.b.b	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #21	ENSGT01030000236180 #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00940000174020 #25	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00910000147177 #33	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000183043.b.a.g.a	ENSGT00950000183043.b.b	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #21	ENSGT01030000236180 #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00940000174020 #25	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00910000147177 #33	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Vervet Monkey	MODERN SPECIES	15	PHYKPL (ENSCSAG00000008619)	CLK4 (ENSCSAG00000008600) #7	ZNF354A (ENSCSAG00000008589)	ZNF354B (ENSCSAG00000008583) #8	ZFP2 (ENSCSAG00000008564) #11	ZNF454 (ENSCSAG00000008562) #12	GRM6 (ENSCSAG00000008547) #13	ZNF879 (ENSCSAG00000008491) #14	ZNF354C (ENSCSAG00000008484) #15	ADAMTS2 (ENSCSAG00000008473) #16	RUFY1 (ENSCSAG00000008458) #17	HNRNPH1 (ENSCSAG00000008415) #18	ENSCSAG00000008405	CBY3 (ENSCSAG00000008395) #19	CANX (ENSCSAG00000008385) #21	MAML1 (ENSCSAG00000008369) #22	LTC4S (ENSCSAG00000008363) #23	MGAT4B (ENSCSAG00000008346) #24	SQSTM1 (ENSCSAG00000008334) #26	MRNIP (ENSCSAG00000008324) #27	TBC1D9B (ENSCSAG00000008307) #28	RNF130 (ENSCSAG00000008295) #29	RASGEF1C (ENSCSAG00000008274) #30	MAPK9 (ENSCSAG00000008264) #31	GFPT2 (ENSCSAG00000008225) #32	CNOT6 (ENSCSAG00000008165) #34	SCGB3A1 (ENSCSAG00000008157) #36	FLT4 (ENSCSAG00000008130) #37	MGAT1 (ENSCSAG00000019727)	ZFP62 (ENSCSAG00000008052)	BTNL8 (ENSCSAG00000008045)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00910000147061	ENSGT00940000154944.e.b #9	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #21	ENSGT01030000236180 #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00940000174020 #25	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00910000147177 #33	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00940000162570 #8	ENSGT00910000147061	ENSGT00940000154944.e.b #9	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00940000174020 #25	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00910000147177 #33	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Olive baboon	MODERN SPECIES	15	COL23A1 (ENSPANG00000006848)	CLK4 (ENSPANG00000014774) #7	MSANTD5 (ENSPANG00000042990)	ZNF354A (ENSPANG00000032762)	ZNF354B (ENSPANG00000002751) #8	ZNF454 (ENSPANG00000009509) #12	GRM6 (ENSPANG00000006031) #13	ZNF879 (ENSPANG00000032345) #14	ADAMTS2 (ENSPANG00000005312) #16	ENSPANG00000049297	ENSPANG00000040974	RUFY1 (ENSPANG00000019170) #17	HNRNPH1 (ENSPANG00000013058) #18	CBY3 (ENSPANG00000012012) #19	CANX (ENSPANG00000013567) #21	MAML1 (ENSPANG00000009297) #22	ENSPANG00000044272 #23	MGAT4B (ENSPANG00000009339) #24	ENSPANG00000038696 #25	SQSTM1 (ENSPANG00000012011) #26	MRNIP (ENSPANG00000002750) #27	TBC1D9B (ENSPANG00000003016) #28	RNF130 (ENSPANG00000030752) #29	RASGEF1C (ENSPANG00000003726) #30	MAPK9 (ENSPANG00000013251) #31	GFPT2 (ENSPANG00000016006) #32	CNOT6 (ENSPANG00000016191) #34	ENSPANG00000029867 #35	SCGB3A1 (ENSPANG00000032680) #36	FLT4 (ENSPANG00000016325) #37	ENSPANG00000050685
Cercopithecinae_d	ANCESTRAL SPECIES	115	ENSGT00940000162570 #8	ENSGT00910000147061	ENSGT00940000154944.e.b #9	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00940000153299.c.b.a.b.a.a.b	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00910000147177 #33	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00970000194357.a
Sooty mangabey	MODERN SPECIES	157	ENSCATG00000020646	ENSCATG00000025765 #9	ZFP2 (ENSCATG00000029817) #11	ZNF454 (ENSCATG00000031926) #12	GRM6 (ENSCATG00000042346) #13	ZNF879 (ENSCATG00000029400) #14	ZNF354C (ENSCATG00000039049) #15	ADAMTS2 (ENSCATG00000024805) #16	RUFY1 (ENSCATG00000012248) #17	HNRNPH1 (ENSCATG00000034747) #18	ENSCATG00000037633	ENSCATG00000039249	CBY3 (ENSCATG00000038136) #19	ENSCATG00000030870	CANX (ENSCATG00000024926) #21	MAML1 (ENSCATG00000035850) #22	MGAT4B (ENSCATG00000021105) #24	LTC4S (ENSCATG00000029442) #23	SQSTM1 (ENSCATG00000034356) #26	MRNIP (ENSCATG00000038409) #27	TBC1D9B (ENSCATG00000037328) #28	RNF130 (ENSCATG00000039524) #29	RASGEF1C (ENSCATG00000010154) #30	ENSCATG00000000228	MAPK9 (ENSCATG00000033689) #31	GFPT2 (ENSCATG00000033682) #32	ENSCATG00000034666 #33	CNOT6 (ENSCATG00000042014) #34	ENSCATG00000037590 #35	SCGB3A1 (ENSCATG00000035525) #36	FLT4 (ENSCATG00000035362) #37
Drill	MODERN SPECIES	603	ZNF354A (ENSMLEG00000038806)	ENSMLEG00000043968	ZNF354B (ENSMLEG00000037960) #8	ENSMLEG00000003410	ZFP2 (ENSMLEG00000014884) #11	ZNF454 (ENSMLEG00000039955) #12	GRM6 (ENSMLEG00000031526) #13	ZNF879 (ENSMLEG00000044457) #14	ZNF354C (ENSMLEG00000029929) #15	ADAMTS2 (ENSMLEG00000037514) #16	RUFY1 (ENSMLEG00000042265) #17	ENSMLEG00000040142 #18	ENSMLEG00000027731	CBY3 (ENSMLEG00000028373) #19	CANX (ENSMLEG00000041092) #21	MAML1 (ENSMLEG00000033787) #22	LTC4S (ENSMLEG00000039124) #23	MGAT4B (ENSMLEG00000030238) #24	SQSTM1 (ENSMLEG00000037546) #26	MRNIP (ENSMLEG00000041022) #27	TBC1D9B (ENSMLEG00000029660) #28	RNF130 (ENSMLEG00000044175) #29	RASGEF1C (ENSMLEG00000034495) #30	MAPK9 (ENSMLEG00000027658) #31	GFPT2 (ENSMLEG00000040967) #32	ENSMLEG00000039942 #33	CNOT6 (ENSMLEG00000010555) #34	FLT4 (ENSMLEG00000028787) #37	ENSMLEG00000029740	MGAT1 (ENSMLEG00000000882)	ZFP62 (ENSMLEG00000011033)
Macaca	ANCESTRAL SPECIES	7	ENSGT00940000162570 #8	ENSGT00910000147061	ENSGT00940000154944.e.b #9	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236180 #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00910000147177 #33	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a	ENSGT00530000063632.B
Pig-tailed macaque	MODERN SPECIES	591	ENSMNEG00000041417 #9	ZFP2 (ENSMNEG00000038326) #11	ZNF454 (ENSMNEG00000002699) #12	GRM6 (ENSMNEG00000044389) #13	ZNF879 (ENSMNEG00000030724) #14	ZNF354C (ENSMNEG00000034678) #15	ADAMTS2 (ENSMNEG00000032393) #16	RUFY1 (ENSMNEG00000036092) #17	HNRNPH1 (ENSMNEG00000032375) #18	ENSMNEG00000044166	CBY3 (ENSMNEG00000037134) #19	ENSMNEG00000004160	ENSMNEG00000033462	CANX (ENSMNEG00000038823) #21	ENSMNEG00000020821 #20	MAML1 (ENSMNEG00000031843) #22	LTC4S (ENSMNEG00000042676) #23	MGAT4B (ENSMNEG00000042915) #24	SQSTM1 (ENSMNEG00000021850) #26	MRNIP (ENSMNEG00000032717) #27	TBC1D9B (ENSMNEG00000036227) #28	RNF130 (ENSMNEG00000030254) #29	RASGEF1C (ENSMNEG00000040323) #30	MAPK9 (ENSMNEG00000041405) #31	GFPT2 (ENSMNEG00000030936) #32	ENSMNEG00000002473 #33	CNOT6 (ENSMNEG00000038565) #34	SCGB3A1 (ENSMNEG00000041974) #36	FLT4 (ENSMNEG00000030424) #37	OR2Y1 (ENSMNEG00000026132)	MGAT1 (ENSMNEG00000013091)
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00840000130327	ENSGT00940000161487	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236180 #20	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a	ENSGT00530000063632.B	ENSGT00940000162750
Crab-eating macaque	MODERN SPECIES	16	CLK4 (ENSMFAG00000040140) #7	MSANTD5 (ENSMFAG00000055801)	ZNF354A (ENSMFAG00000013407)	ZNF354B (ENSMFAG00000029623) #8	ZFP2 (ENSMFAG00000014508) #11	ZNF454 (ENSMFAG00000043337) #12	GRM6 (ENSMFAG00000002639) #13	ENSMFAG00000050028	ZNF879 (ENSMFAG00000039136) #14	ADAMTS2 (ENSMFAG00000002799) #16	RUFY1 (ENSMFAG00000033376) #17	HNRNPH1 (ENSMFAG00000028267) #18	ENSMFAG00000033075	CANX (ENSMFAG00000031934) #21	CBY3 (ENSMFAG00000042944) #19	MAML1 (ENSMFAG00000044212) #22	ENSMFAG00000043066 #23	MGAT4B (ENSMFAG00000029205) #24	SQSTM1 (ENSMFAG00000032992) #26	MRNIP (ENSMFAG00000040511) #27	TBC1D9B (ENSMFAG00000000062) #28	RNF130 (ENSMFAG00000019863) #29	ENSMFAG00000061594	ENSMFAG00000065456	MAPK9 (ENSMFAG00000042461) #31	GFPT2 (ENSMFAG00000045396) #32	ENSMFAG00000054397	CNOT6 (ENSMFAG00000030867) #34	SCGB3A1 (ENSMFAG00000040059) #36	FLT4 (ENSMFAG00000033698) #37	OR2Y1 (ENSMFAG00000030133)
Rhesus	MODERN SPECIES	16	CLK4 (ENSMMUG00000004002) #7	MSANTD5 (ENSMMUG00000050539)	ZNF354A (ENSMMUG00000041519)	ZNF354B (ENSMMUG00000008976) #8	ZFP2 (ENSMMUG00000008978) #11	ZNF354C (ENSMMUG00000002485) #15	GRM6 (ENSMMUG00000017587) #13	ADAMTS2 (ENSMMUG00000002488) #16	RUFY1 (ENSMMUG00000018666) #17	HNRNPH1 (ENSMMUG00000010843) #18	ENSMMUG00000063082	CBY3 (ENSMMUG00000043680) #19	ENSMMUG00000058524	CANX (ENSMMUG00000012370) #21	ENSMMUG00000050372 #20	MAML1 (ENSMMUG00000012371) #22	LTC4S (ENSMMUG00000012373) #23	MGAT4B (ENSMMUG00000012374) #24	SQSTM1 (ENSMMUG00000021055) #26	MRNIP (ENSMMUG00000021056) #27	TBC1D9B (ENSMMUG00000021057) #28	RNF130 (ENSMMUG00000013347) #29	RASGEF1C (ENSMMUG00000000635) #30	MAPK9 (ENSMMUG00000001728) #31	GFPT2 (ENSMMUG00000001731) #32	CNOT6 (ENSMMUG00000018690) #34	SCGB3A1 (ENSMMUG00000018692) #36	FLT4 (ENSMMUG00000018693) #37	OR2Y1 (ENSMMUG00000009136)	MGAT1 (ENSMMUG00000047880)	ZFP62 (ENSMMUG00000042832)
Rhinopithecus	ANCESTRAL SPECIES	447													ENSGT00940000166214	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31
Golden snub-nosed monkey	MODERN SPECIES	2239	ZNF354B (ENSRROG00000029239) #8	ENSRROG00000021202	ENSRROG00000045092 #9	ZFP2 (ENSRROG00000038496) #11	ZNF454 (ENSRROG00000029318) #12	GRM6 (ENSRROG00000044108) #13	ZNF879 (ENSRROG00000030257) #14	ZNF354C (ENSRROG00000039027) #15	ADAMTS2 (ENSRROG00000041064) #16	RUFY1 (ENSRROG00000041055) #17	ENSRROG00000035613 #18	ENSRROG00000027548	ENSRROG00000036327	CBY3 (ENSRROG00000034035) #19	CANX (ENSRROG00000034381) #21	MAML1 (ENSRROG00000039755) #22	LTC4S (ENSRROG00000033957) #23	MGAT4B (ENSRROG00000038612) #24	SQSTM1 (ENSRROG00000036129) #26	MRNIP (ENSRROG00000030855) #27	TBC1D9B (ENSRROG00000043130) #28	RNF130 (ENSRROG00000017609) #29	ENSRROG00000038764	RASGEF1C (ENSRROG00000026189) #30	MAPK9 (ENSRROG00000027518) #31
Black snub-nosed monkey	MODERN SPECIES	2515													ENSRBIG00000031883	CBY3 (ENSRBIG00000027813) #19	CANX (ENSRBIG00000020901) #21	MAML1 (ENSRBIG00000044794) #22	LTC4S (ENSRBIG00000043907) #23	MGAT4B (ENSRBIG00000044569) #24	SQSTM1 (ENSRBIG00000040424) #26	MRNIP (ENSRBIG00000010959) #27	TBC1D9B (ENSRBIG00000034540) #28	RNF130 (ENSRBIG00000042845) #29	RASGEF1C (ENSRBIG00000038870) #30
Platyrrhini	ANCESTRAL SPECIES	19	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000154173.A.a.b	ENSGT00940000159358 #37	ENSGT00420000029848.A #36	ENSGT00900000143807 #35	ENSGT00940000158978 #34	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000162292	ENSGT00940000162330	ENSGT00940000161487	ENSGT00940000160245 #7	ENSGT00940000162238	ENSGT00940000159222
Cebidae	ANCESTRAL SPECIES	47	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000154173.A.a.b	ENSGT00940000159358 #37	ENSGT00420000029848.A #36	ENSGT00900000143807 #35	ENSGT00940000158978 #34	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32
Cebidae_a	ANCESTRAL SPECIES	113	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000154173.A.a.b	ENSGT00940000159358 #37	ENSGT00420000029848.A #36	ENSGT00940000158978 #34	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32
Bolivian squirrel monkey	MODERN SPECIES	237	ZFP2 (ENSSBOG00000020675) #11	ZNF454 (ENSSBOG00000028339) #12	GRM6 (ENSSBOG00000024819) #13	ZNF879 (ENSSBOG00000022474) #14	ZNF354C (ENSSBOG00000015814) #15	ADAMTS2 (ENSSBOG00000025193) #16	ENSSBOG00000025755	FLT4 (ENSSBOG00000031031) #37	SCGB3A1 (ENSSBOG00000027262) #36	ENSSBOG00000027641	CNOT6 (ENSSBOG00000030494) #34	RUFY1 (ENSSBOG00000031721) #17	HNRNPH1 (ENSSBOG00000022306) #18	CBY3 (ENSSBOG00000023009) #19	CANX (ENSSBOG00000034866) #21	MAML1 (ENSSBOG00000021790) #22	ENSSBOG00000028968 #23	ENSSBOG00000014015 #24	SQSTM1 (ENSSBOG00000024318) #26	MRNIP (ENSSBOG00000023818) #27	TBC1D9B (ENSSBOG00000027386) #28	ENSSBOG00000027608	RNF130 (ENSSBOG00000023510) #29	ENSSBOG00000021880	RASGEF1C (ENSSBOG00000030445) #30	MAPK9 (ENSSBOG00000019251) #31	GFPT2 (ENSSBOG00000019062) #32
Capuchin	MODERN SPECIES	623													ENSCCAG00000027696	CBY3 (ENSCCAG00000031282) #19	CANX (ENSCCAG00000029294) #21	MAML1 (ENSCCAG00000028130) #22	LTC4S (ENSCCAG00000026797) #23	MGAT4B (ENSCCAG00000035998) #24	SQSTM1 (ENSCCAG00000034206) #26	MRNIP (ENSCCAG00000028973) #27	TBC1D9B (ENSCCAG00000033711) #28	RNF130 (ENSCCAG00000034314) #29	ENSCCAG00000026775	ENSCCAG00000028190	RASGEF1C (ENSCCAG00000024499) #30	MAPK9 (ENSCCAG00000038038) #31	ENSCCAG00000036076	GFPT2 (ENSCCAG00000030175) #32
Marmoset	MODERN SPECIES	11	ZFP62 (ENSCJAG00000018839)	MGAT1 (ENSCJAG00000046208)	ZNF354B (ENSCJAG00000018848) #8	ZNF454 (ENSCJAG00000018857) #12	GRM6 (ENSCJAG00000018865) #13	ZNF879 (ENSCJAG00000018904) #14	ZNF354C (ENSCJAG00000086065) #15	ADAMTS2 (ENSCJAG00000018919) #16	FLT4 (ENSCJAG00000009696) #37	SCGB3A1 (ENSCJAG00000009787) #36	ENSCJAG00000043414 #35	CNOT6 (ENSCJAG00000009795) #34	RUFY1 (ENSCJAG00000009844) #17	ENSCJAG00000009931 #18	CANX (ENSCJAG00000009989) #21	MAML1 (ENSCJAG00000048349) #22	LTC4S (ENSCJAG00000010116) #23	MGAT4B (ENSCJAG00000010124) #24	SQSTM1 (ENSCJAG00000010152) #26	MRNIP (ENSCJAG00000010163) #27	TBC1D9B (ENSCJAG00000010170) #28	RNF130 (ENSCJAG00000010215) #29	RASGEF1C (ENSCJAG00000010277) #30	ENSCJAG00000044504	MAPK9 (ENSCJAG00000010293) #31	GFPT2 (ENSCJAG00000010359) #32	SIMC1 (ENSCJAG00000012354)	KIAA1191 (ENSCJAG00000012337)	ARL10 (ENSCJAG00000012332)	NOP16 (ENSCJAG00000057017)	ENSCJAG00000084164
Mas night monkey	MODERN SPECIES	911	ZNF454 (ENSANAG00000037002) #12	GRM6 (ENSANAG00000032011) #13	ZNF354C (ENSANAG00000021816) #15	ADAMTS2 (ENSANAG00000032180) #16	ENSANAG00000027694	FLT4 (ENSANAG00000030669) #37	SCGB3A1 (ENSANAG00000025025) #36	CNOT6 (ENSANAG00000030436) #34	ENSANAG00000013483	ENSANAG00000028928	ENSANAG00000030413	RUFY1 (ENSANAG00000031581) #17	HNRNPH1 (ENSANAG00000035312) #18	CBY3 (ENSANAG00000024701) #19	CANX (ENSANAG00000025740) #21	MAML1 (ENSANAG00000037400) #22	LTC4S (ENSANAG00000024498) #23	MGAT4B (ENSANAG00000036256) #24	SQSTM1 (ENSANAG00000036320) #26	MRNIP (ENSANAG00000030629) #27	TBC1D9B (ENSANAG00000033570) #28	RNF130 (ENSANAG00000033140) #29	RASGEF1C (ENSANAG00000036683) #30	MAPK9 (ENSANAG00000024448) #31	GFPT2 (ENSANAG00000025129) #32	PROP1 (ENSANAG00000033421)	ZNF354A (ENSANAG00000022081)	CLK4 (ENSANAG00000022160) #7	COL23A1 (ENSANAG00000037234)	PHYKPL (ENSANAG00000035175)	ENSANAG00000026991
Tarsier	MODERN SPECIES	2078															CANX (ENSTSYG00000031071) #21	MAML1 (ENSTSYG00000027426) #22
Strepsirrhini	ANCESTRAL SPECIES	5						ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a.k #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Lemuriformes	ANCESTRAL SPECIES	25	ENSGT00940000159977	ENSGT00390000018596.A.b	ENSGT00940000160536	ENSGT00390000013236	ENSGT00940000155271	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a.k #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Mouse lemur	MODERN SPECIES	10	CIDEA (ENSMICG00000007492)	IMPA2 (ENSMICG00000004775)	ENSMICG00000001930	GNAL (ENSMICG00000001922)	ZNF454 (ENSMICG00000032054) #12	GRM6 (ENSMICG00000000566) #13	ZNF879 (ENSMICG00000033568) #14	ZNF354C (ENSMICG00000034512) #15	ADAMTS2 (ENSMICG00000010523) #16	RUFY1 (ENSMICG00000012324) #17	ENSMICG00000033979 #18	ENSMICG00000027131	CBY3 (ENSMICG00000036379) #19	CANX (ENSMICG00000003149) #21	ENSMICG00000007943	MAML1 (ENSMICG00000034960) #22	LTC4S (ENSMICG00000044735) #23	MGAT4B (ENSMICG00000006533) #24	SQSTM1 (ENSMICG00000006544) #26	ENSMICG00000002549 #27	TBC1D9B (ENSMICG00000036875) #28	RNF130 (ENSMICG00000043962) #29	MAPK9 (ENSMICG00000015900) #31	GFPT2 (ENSMICG00000015921) #32	ENSMICG00000013018 #34	SCGB3A1 (ENSMICG00000001211) #36	FLT4 (ENSMICG00000005770) #37	RBM47 (ENSMICG00000026417)	CHRNA9 (ENSMICG00000035894)	RHOH (ENSMICG00000027779)	ENSMICG00000038258
Lemuriformes_a	ANCESTRAL SPECIES	32	ENSGT00940000159977	ENSGT00390000018596.A.b	ENSGT00940000160536	ENSGT00390000013236	ENSGT00940000155271	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a.k #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Greater bamboo lemur	MODERN SPECIES	376		CIDEA (ENSPSMG00000012085)	IMPA2 (ENSPSMG00000012070)	MPPE1 (ENSPSMG00000012056)	GNAL (ENSPSMG00000012017)	ZFP2 (ENSPSMG00000011924) #11	ZNF454 (ENSPSMG00000011918) #12	GRM6 (ENSPSMG00000011907) #13	ZNF879 (ENSPSMG00000011864) #14	ZNF354C (ENSPSMG00000011861) #15	ADAMTS2 (ENSPSMG00000011850) #16	RUFY1 (ENSPSMG00000011809) #17	HNRNPH1 (ENSPSMG00000011572) #18	CBY3 (ENSPSMG00000011344) #19	CANX (ENSPSMG00000011331) #21	MAML1 (ENSPSMG00000011314) #22	LTC4S (ENSPSMG00000011309) #23	MGAT4B (ENSPSMG00000011272) #24	SQSTM1 (ENSPSMG00000011174) #26	ENSPSMG00000011137 #27	TBC1D9B (ENSPSMG00000011075) #28	RNF130 (ENSPSMG00000010915) #29
Coquerels sifaka	MODERN SPECIES	816												RUFY1 (ENSPCOG00000002762) #17	HNRNPH1 (ENSPCOG00000016762) #18	CBY3 (ENSPCOG00000003073) #19	ENSPCOG00000015157 #21	MAML1 (ENSPCOG00000020980) #22	LTC4S (ENSPCOG00000019610) #23	MGAT4B (ENSPCOG00000014500) #24	SQSTM1 (ENSPCOG00000019361) #26	ENSPCOG00000013902	ENSPCOG00000018302 #27	TBC1D9B (ENSPCOG00000020338) #28
Bushbaby	MODERN SPECIES	261	AFAP1 (ENSOGAG00000009378)	ABLIM2 (ENSOGAG00000007881)	SH3TC1 (ENSOGAG00000007883)	HTRA3 (ENSOGAG00000025277)	ACOX3 (ENSOGAG00000002245)	TRMT44 (ENSOGAG00000002246)	CPZ (ENSOGAG00000002249)	HMX1 (ENSOGAG00000032103)	ADRA2C (ENSOGAG00000033833)	ZNF354C (ENSOGAG00000011077) #15	ADAMTS2 (ENSOGAG00000011081) #16	RUFY1 (ENSOGAG00000012620) #17	HNRNPH1 (ENSOGAG00000012631) #18	ENSOGAG00000029984 #19	CANX (ENSOGAG00000015727) #21	MAML1 (ENSOGAG00000024232) #22	LTC4S (ENSOGAG00000024180) #23	MGAT4B (ENSOGAG00000016831) #24	SQSTM1 (ENSOGAG00000002151) #26	MRNIP (ENSOGAG00000002152) #27	TBC1D9B (ENSOGAG00000009796) #28	RNF130 (ENSOGAG00000009805) #29	RASGEF1C (ENSOGAG00000016873) #30	MAPK9 (ENSOGAG00000016875) #31	GFPT2 (ENSOGAG00000016878) #32	CNOT6 (ENSOGAG00000032470) #34	SCGB3A1 (ENSOGAG00000001706) #36	FLT4 (ENSOGAG00000001707) #37	ENSOGAG00000028687	ENSOGAG00000025685	ZNF354B (ENSOGAG00000027501) #8
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000164840	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Tree shrew	MODERN SPECIES	1184																ENSTBEG00000008651 #22
Glires	ANCESTRAL SPECIES	7	ENSGT00940000164840	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000164840	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Sciuridae	ANCESTRAL SPECIES	33	ENSGT00940000160245 #7	ENSGT00940000161487	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Marmotini	ANCESTRAL SPECIES	90		ENSGT00940000162327	ENSGT00940000163610	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.d.b.a
Marmotini_b	ANCESTRAL SPECIES	162		ENSGT00940000162327	ENSGT00940000163610	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a.d.b.a
Arctic ground squirrel	MODERN SPECIES	533															CANX (ENSUPAG00010012868) #21	MAML1 (ENSUPAG00010012921) #22	LTC4S (ENSUPAG00010012940) #23	MGAT4B (ENSUPAG00010012951) #24	SQSTM1 (ENSUPAG00010012981) #26	MRNIP (ENSUPAG00010013026) #27	TBC1D9B (ENSUPAG00010013038) #28	RNF130 (ENSUPAG00010013174) #29	RASGEF1C (ENSUPAG00010013202) #30	MAPK9 (ENSUPAG00010013292) #31	GFPT2 (ENSUPAG00010013498) #32	ENSUPAG00010013530	CNOT6 (ENSUPAG00010013547) #34	SCGB3A1 (ENSUPAG00010013577) #36	FLT4 (ENSUPAG00010013592) #37	ENSUPAG00010013659	ENSUPAG00010013751
Squirrel	MODERN SPECIES	339		ENSSTOG00000001898	ENSSTOG00000027829	PROP1 (ENSSTOG00000013571)	ZNF354B (ENSSTOG00000008858) #8	ZFP2 (ENSSTOG00000034472) #11	ZNF454 (ENSSTOG00000029783) #12	GRM6 (ENSSTOG00000021282) #13	ZNF879 (ENSSTOG00000033666) #14	ZNF354C (ENSSTOG00000023695) #15	ADAMTS2 (ENSSTOG00000004811) #16	RUFY1 (ENSSTOG00000016368) #17	HNRNPH1 (ENSSTOG00000016376) #18	CBY3 (ENSSTOG00000013625) #19	CANX (ENSSTOG00000013636) #21	MAML1 (ENSSTOG00000013644) #22	LTC4S (ENSSTOG00000028546) #23	MGAT4B (ENSSTOG00000015692) #24	SQSTM1 (ENSSTOG00000013654) #26	ENSSTOG00000013660 #27	TBC1D9B (ENSSTOG00000013665) #28	RNF130 (ENSSTOG00000013681) #29	RASGEF1C (ENSSTOG00000002744) #30	MAPK9 (ENSSTOG00000002755) #31	GFPT2 (ENSSTOG00000002766) #32	ENSSTOG00000026322	CNOT6 (ENSSTOG00000002803) #34	SCGB3A1 (ENSSTOG00000029379) #36	FLT4 (ENSSTOG00000009900) #37	ENSSTOG00000024162	ENSSTOG00000023199
Alpin marmot	MODERN SPECIES	119		PGBD2 (ENSMMMG00000010992)	ENSMMMG00000010966	PROP1 (ENSMMMG00000010955)	ZNF354B (ENSMMMG00000010934) #8	ZFP2 (ENSMMMG00000010928) #11	ZNF454 (ENSMMMG00000010924) #12	GRM6 (ENSMMMG00000010868) #13	ZNF879 (ENSMMMG00000010856) #14	ZNF354C (ENSMMMG00000010838) #15	ADAMTS2 (ENSMMMG00000010786) #16	RUFY1 (ENSMMMG00000010729) #17	HNRNPH1 (ENSMMMG00000010637) #18	ENSMMMG00000010630 #19	CANX (ENSMMMG00000010583) #21	MAML1 (ENSMMMG00000010563) #22	LTC4S (ENSMMMG00000010544) #23	MGAT4B (ENSMMMG00000010531) #24	SQSTM1 (ENSMMMG00000010495) #26	ENSMMMG00000010488	ENSMMMG00000010477 #27	ENSMMMG00000010472	TBC1D9B (ENSMMMG00000010464) #28	RNF130 (ENSMMMG00000010453) #29	RASGEF1C (ENSMMMG00000010333) #30	MAPK9 (ENSMMMG00000009979) #31	GFPT2 (ENSMMMG00000009950) #32	ENSMMMG00000009922	ENSMMMG00000009920	CNOT6 (ENSMMMG00000009896) #34	SCGB3A1 (ENSMMMG00000009881) #36
Eurasian red squirrel	MODERN SPECIES	15	ENSSVLG00005003942	ENSSVLG00005003957	PROP1 (ENSSVLG00005003982)	ZNF354B (ENSSVLG00005003997) #8	ZFP2 (ENSSVLG00005004011) #11	ZNF454 (ENSSVLG00005004024) #12	GRM6 (ENSSVLG00005004048) #13	ZNF879 (ENSSVLG00005004068) #14	ZNF354C (ENSSVLG00005004083) #15	ADAMTS2 (ENSSVLG00005004107) #16	RUFY1 (ENSSVLG00005004214) #17	HNRNPH1 (ENSSVLG00005004313) #18	CBY3 (ENSSVLG00005004437) #19	CANX (ENSSVLG00005004460) #21	ENSSVLG00005004484	MAML1 (ENSSVLG00005004507) #22	LTC4S (ENSSVLG00005004534) #23	MGAT4B (ENSSVLG00005004599) #24	SQSTM1 (ENSSVLG00005004679) #26	MRNIP (ENSSVLG00005004714) #27	TBC1D9B (ENSSVLG00005004773) #28	ENSSVLG00005004884	RNF130 (ENSSVLG00005004920) #29	RASGEF1C (ENSSVLG00005004985) #30	MAPK9 (ENSSVLG00005005069) #31	ENSSVLG00005005097 #31	GFPT2 (ENSSVLG00005005125) #32	CNOT6 (ENSSVLG00005005179) #34	SCGB3A1 (ENSSVLG00005005231) #36	ENSSVLG00005005257	ENSSVLG00005005292
Hystricomorpha	ANCESTRAL SPECIES	30	ENSGT00940000160245 #7	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Hystricomorpha_a	ANCESTRAL SPECIES	74	ENSGT00940000162238	ENSGT00940000160245 #7	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Hystricomorpha_b	ANCESTRAL SPECIES	19	ENSGT00940000162238	ENSGT00940000160245 #7	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Long-tailed chinchilla	MODERN SPECIES	115	CLK4 (ENSCLAG00000013604) #7	ZNF354A (ENSCLAG00000014648)	ENSCLAG00000010643	ENSCLAG00000017710	ZNF354B (ENSCLAG00000013514) #8	ZFP2 (ENSCLAG00000011174) #11	ENSCLAG00000010435 #12	ENSCLAG00000010195 #12	GRM6 (ENSCLAG00000015195) #13	ZNF879 (ENSCLAG00000013696) #14	ZNF354C (ENSCLAG00000012651) #15	ADAMTS2 (ENSCLAG00000012213) #16	RUFY1 (ENSCLAG00000012650) #17	HNRNPH1 (ENSCLAG00000013617) #18	CANX (ENSCLAG00000012635) #21	MAML1 (ENSCLAG00000012443) #22	MGAT4B (ENSCLAG00000013986) #24	SQSTM1 (ENSCLAG00000014864) #26	TBC1D9B (ENSCLAG00000010716) #28	RNF130 (ENSCLAG00000012509) #29	RASGEF1C (ENSCLAG00000010592) #30	MAPK9 (ENSCLAG00000011477) #31	GFPT2 (ENSCLAG00000011097) #32	CNOT6 (ENSCLAG00000010489) #34	SCGB3A1 (ENSCLAG00000017376) #36	FLT4 (ENSCLAG00000012174) #37
Degu	MODERN SPECIES	70	ENSODEG00000007622	CLK4 (ENSODEG00000006750) #7	ZNF354A (ENSODEG00000008278)	ENSODEG00000006751	ENSODEG00000007859	PROP1 (ENSODEG00000007660)	ZNF354B (ENSODEG00000007968) #8	ZNF454 (ENSODEG00000007335) #12	GRM6 (ENSODEG00000009985) #13	ZNF879 (ENSODEG00000007967) #14	ZNF354C (ENSODEG00000007509) #15	ADAMTS2 (ENSODEG00000010343) #16	RUFY1 (ENSODEG00000006045) #17	ENSODEG00000007058 #18	CANX (ENSODEG00000007247) #21	MAML1 (ENSODEG00000007120) #22	LTC4S (ENSODEG00000006956) #23	MGAT4B (ENSODEG00000006661) #24	SQSTM1 (ENSODEG00000007536) #26	TBC1D9B (ENSODEG00000007268) #28	RNF130 (ENSODEG00000006815) #29	ENSODEG00000006074 #31	GFPT2 (ENSODEG00000007246) #32	ENSODEG00000006939	CNOT6 (ENSODEG00000007041) #34	SCGB3A1 (ENSODEG00000006628) #36	FLT4 (ENSODEG00000006420) #37
Guinea pig	MODERN SPECIES	176	ZNF354A (ENSCPOG00000034791)	ENSCPOG00000037406	ENSCPOG00000025194	PROP1 (ENSCPOG00000020734)	ZNF354B (ENSCPOG00000002227) #8	ZFP2 (ENSCPOG00000031347) #11	ENSCPOG00000033835 #12	ENSCPOG00000035563 #12	GRM6 (ENSCPOG00000001162) #13	ZNF879 (ENSCPOG00000040313) #14	ZNF354C (ENSCPOG00000038581) #15	ADAMTS2 (ENSCPOG00000001168) #16	RUFY1 (ENSCPOG00000012088) #17	ENSCPOG00000001485 #18	CANX (ENSCPOG00000003259) #21	MAML1 (ENSCPOG00000009382) #22	LTC4S (ENSCPOG00000021312) #23	MGAT4B (ENSCPOG00000005836) #24	SQSTM1 (ENSCPOG00000026534) #26	TBC1D9B (ENSCPOG00000011294) #28	ENSCPOG00000015076	RNF130 (ENSCPOG00000013821) #29
Naked mole-rat female	MODERN SPECIES	23	ENSHGLG00000045105	ENSHGLG00000032445	ENSHGLG00000009648	ENSHGLG00000034750	ENSHGLG00000033241	ENSHGLG00000047455 #8	ZFP2 (ENSHGLG00000033138) #11	GRM6 (ENSHGLG00000013576) #13	ZNF879 (ENSHGLG00000013266) #14	ENSHGLG00000019454 #15	ADAMTS2 (ENSHGLG00000017531) #16	RUFY1 (ENSHGLG00000017638) #17	HNRNPH1 (ENSHGLG00000018565) #18	ENSHGLG00000014040 #19	ENSHGLG00000014507 #21	MAML1 (ENSHGLG00000007422) #22	LTC4S (ENSHGLG00000008079) #23	ENSHGLG00000010792 #24	SQSTM1 (ENSHGLG00000012249) #26	ENSHGLG00000034162 #27	TBC1D9B (ENSHGLG00000014248) #28	RNF130 (ENSHGLG00000019044) #29	ENSHGLG00000016658	RASGEF1C (ENSHGLG00000018254) #30	ENSHGLG00000039343	MAPK9 (ENSHGLG00000018063) #31	GFPT2 (ENSHGLG00000018020) #32	CNOT6 (ENSHGLG00000017756) #34	ENSHGLG00000015320 #36	ENSHGLG00000017837 #37	ENSHGLG00000019068
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00840000130327	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b	ENSGT00530000063632.B
Myomorpha	ANCESTRAL SPECIES	28	ENSGT00840000130327	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.f	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a
Muroidea	ANCESTRAL SPECIES	10	ENSGT00940000161487	ENSGT00940000164840	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.a	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.a
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000162330.i.a.b.a	ENSGT00940000162330.i.a.a	ENSGT00940000162330.j	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000162330.i.a.b.a	ENSGT00940000162330.i.a.a	ENSGT00940000162330.j	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00840000130327	ENSGT00940000161487	ENSGT00940000162330.j	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b
Northern American deer mouse	MODERN SPECIES	21	ENSPEMG00000025212	ENSPEMG00000026849	Or1ad6 (ENSPEMG00000029264)	Prop1 (ENSPEMG00000002087)	Zfp354b (ENSPEMG00000001281) #8	Zfp2 (ENSPEMG00000030164) #11	Zfp454 (ENSPEMG00000009308) #12	Grm6 (ENSPEMG00000012676) #13	Zfp879 (ENSPEMG00000010770) #14	Zfp354c (ENSPEMG00000014426) #15	Adamts2 (ENSPEMG00000018873) #16	Rufy1 (ENSPEMG00000009753) #17	Hnrnph1 (ENSPEMG00000018866) #18	ENSPEMG00000017877 #19	Canx (ENSPEMG00000005531) #21	Maml1 (ENSPEMG00000019224) #22	Ltc4s (ENSPEMG00000027708)	Mgat4b (ENSPEMG00000014635) #24	Sqstm1 (ENSPEMG00000019274) #26	Mrnip (ENSPEMG00000018478) #27	Tbc1d9b (ENSPEMG00000013746) #28	Rnf130 (ENSPEMG00000016730) #29	Rasgef1c (ENSPEMG00000018905) #30	Mapk9 (ENSPEMG00000016205) #31	Gfpt2 (ENSPEMG00000001870) #32	Cnot6 (ENSPEMG00000000627) #34	Scgb3a1 (ENSPEMG00000001932) #36	Flt4 (ENSPEMG00000013317) #37	ENSPEMG00000026395	ENSPEMG00000024369	ENSPEMG00000028647
Prairie vole	MODERN SPECIES	15	Clk4 (ENSMOCG00000022044) #7	ENSMOCG00000002350	Zfp354a (ENSMOCG00000003692)	Prop1 (ENSMOCG00000021712)	Zfp354b (ENSMOCG00000019941) #8	Zfp2 (ENSMOCG00000022747) #11	Zfp454 (ENSMOCG00000020470) #12	Grm6 (ENSMOCG00000018877) #13	Zfp879 (ENSMOCG00000020947) #14	Zfp354c (ENSMOCG00000022297) #15	Adamts2 (ENSMOCG00000022331) #16	Rufy1 (ENSMOCG00000003244) #17	Hnrnph1 (ENSMOCG00000020579) #18	ENSMOCG00000011359 #19	Canx (ENSMOCG00000011838) #21	Maml1 (ENSMOCG00000001181) #22	ENSMOCG00000021052 #23	Mgat4b (ENSMOCG00000010677) #24	ENSMOCG00000002756 #25	ENSMOCG00000019043	Mrnip (ENSMOCG00000014732) #27	Tbc1d9b (ENSMOCG00000017854) #28	Rnf130 (ENSMOCG00000022727) #29	Rasgef1c (ENSMOCG00000017254) #30	Mapk9 (ENSMOCG00000020546) #31	Gfpt2 (ENSMOCG00000022580) #32	Cnot6 (ENSMOCG00000021662) #34	Scgb3a1 (ENSMOCG00000018902) #36	Flt4 (ENSMOCG00000016968) #37	ENSMOCG00000002436	ENSMOCG00000002339
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000162330.i.a.b.a	ENSGT00940000162330.i.a.a	ENSGT00940000162330.j	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.a.b
Chinese hamster chok1gshd	MODERN SPECIES	229	Or1ad1 (ENSCGRG00001005982)	Or1ad6 (ENSCGRG00001007584)	Prop1 (ENSCGRG00001004549)	Zfp2 (ENSCGRG00001006658) #11	Zfp354b (ENSCGRG00001006089) #8	Zfp454 (ENSCGRG00001013939) #12	Grm6 (ENSCGRG00001015589) #13	Zfp879 (ENSCGRG00001013407) #14	Zfp354c (ENSCGRG00001011620) #15	Adamts2 (ENSCGRG00001017939) #16	ENSCGRG00001015852	Rufy1 (ENSCGRG00001013990) #17	Hnrnph1 (ENSCGRG00001013538) #18	Cby3 (ENSCGRG00001009348) #19	Canx (ENSCGRG00001017710) #21	Maml1 (ENSCGRG00001016447) #22	ENSCGRG00001013494 #23	Mgat4b (ENSCGRG00001006474) #24	ENSCGRG00001010734	Sqstm1 (ENSCGRG00001009697) #26	Mrnip (ENSCGRG00001004426) #27	Tbc1d9b (ENSCGRG00001020092) #28	Rnf130 (ENSCGRG00001021248) #29	Rasgef1c (ENSCGRG00001012629) #30	Mapk9 (ENSCGRG00001007000) #31	Gfpt2 (ENSCGRG00001020958) #32	Cnot6 (ENSCGRG00001011452) #34	Scgb3a1 (ENSCGRG00001005289) #36	Flt4 (ENSCGRG00001019633) #37	ENSCGRG00001001933	ENSCGRG00001015595
Golden Hamster	MODERN SPECIES	647	ENSMAUG00000008965	Clk4 (ENSMAUG00000006824) #7	Zfp354a (ENSMAUG00000000735)	Prop1 (ENSMAUG00000013991)	Zfp354b (ENSMAUG00000000163) #8	Zfp2 (ENSMAUG00000006975) #11	Zfp454 (ENSMAUG00000013415) #12	Grm6 (ENSMAUG00000017668) #13	Zfp879 (ENSMAUG00000000179) #14	Zfp354c (ENSMAUG00000001171) #15	Adamts2 (ENSMAUG00000000258) #16	Rufy1 (ENSMAUG00000010229) #17	Hnrnph1 (ENSMAUG00000012959) #18	ENSMAUG00000005355 #19	Canx (ENSMAUG00000007570) #21	Maml1 (ENSMAUG00000011048) #22	ENSMAUG00000004203 #23	Mgat4b (ENSMAUG00000000092) #24	Sqstm1 (ENSMAUG00000014382) #26	Mrnip (ENSMAUG00000016042) #27	Tbc1d9b (ENSMAUG00000014065) #28	Rnf130 (ENSMAUG00000015405) #29	Rasgef1c (ENSMAUG00000017005) #30	Mapk9 (ENSMAUG00000017175) #31	Gfpt2 (ENSMAUG00000000755) #32	Cnot6 (ENSMAUG00000019798) #34	Scgb3a1 (ENSMAUG00000012240) #36	Flt4 (ENSMAUG00000014271) #37	ENSMAUG00000018285	ENSMAUG00000016974	Or2y16 (ENSMAUG00000016979)
Murinae	ANCESTRAL SPECIES	7	ENSGT00940000162330.i.a.b.a	ENSGT00940000162330.i.a.a	ENSGT00940000162330.j	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.f	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.e
Mus	ANCESTRAL SPECIES	2	ENSGT00940000162330.i.b	ENSGT00940000162330.i.a.a	ENSGT00940000162330.j	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.f	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.e	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.a
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000162330.i.a.a	ENSGT00940000162330.j	ENSGT00940000162292	ENSGT00860000136315	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00900000143680	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.f	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.e	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.a
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000162330.i.a.a	ENSGT00940000162330.j	ENSGT00940000162292	ENSGT00860000136315	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00900000143680	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.f	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.a.e	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.a
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000162330.i.a.a	ENSGT00940000162330.j	ENSGT00940000162292	ENSGT00860000136315	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00900000143680	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.a.a.b.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.b.b.a.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.b.f.a.e.b.b
spretus	MODERN SPECIES	2	Or1ad1 (MGP_SPRETEiJ_G0017147)	Or1ad6 (MGP_SPRETEiJ_G0017146)	Prop1 (MGP_SPRETEiJ_G0017145)	4933414I15Rik (MGP_SPRETEiJ_G0017144)	Zfp354b (MGP_SPRETEiJ_G0017143) #8	Zfp2 (MGP_SPRETEiJ_G0017142) #11	Zfp454 (MGP_SPRETEiJ_G0017141) #12	Grm6 (MGP_SPRETEiJ_G0017140) #13	Zfp879 (MGP_SPRETEiJ_G0017139) #14	Zfp354c (MGP_SPRETEiJ_G0017138) #15	Adamts2 (MGP_SPRETEiJ_G0017137) #16	Rufy1 (MGP_SPRETEiJ_G0017136) #17	MGP_SPRETEiJ_G0017135 #18	MGP_SPRETEiJ_G0017134 #19	Canx (MGP_SPRETEiJ_G0017133) #21	Maml1 (MGP_SPRETEiJ_G0017132) #22	Ltc4s (MGP_SPRETEiJ_G0017131)	Mgat4b (MGP_SPRETEiJ_G0017130) #24	Sqstm1 (MGP_SPRETEiJ_G0017129) #26	Mrnip (MGP_SPRETEiJ_G0017128) #27	Tbc1d9b (MGP_SPRETEiJ_G0017127) #28	Rnf130 (MGP_SPRETEiJ_G0017126) #29	Rasgef1c (MGP_SPRETEiJ_G0017125) #30	Mapk9 (MGP_SPRETEiJ_G0017124) #31	Gfpt2 (MGP_SPRETEiJ_G0017123) #32	Cnot6 (MGP_SPRETEiJ_G0017122) #34	Scgb3a1 (MGP_SPRETEiJ_G0017121) #36	Flt4 (MGP_SPRETEiJ_G0017120) #37	MGP_SPRETEiJ_G0017119	MGP_SPRETEiJ_G0017118	MGP_SPRETEiJ_G0017117
Steppe mouse	MODERN SPECIES	2758	Or1ad1 (ENSMSIG00000010102)	Or1ad6 (ENSMSIG00000010084)	Prop1 (ENSMSIG00000010077)	4933414I15Rik (ENSMSIG00000010069)	Zfp354b (ENSMSIG00000010046) #8	Zfp2 (ENSMSIG00000010031) #11	Zfp454 (ENSMSIG00000010013) #12	Grm6 (ENSMSIG00000009979) #13	Zfp879 (ENSMSIG00000009906) #14	Zfp354c (ENSMSIG00000009873) #15	Adamts2 (ENSMSIG00000009833) #16	Rufy1 (ENSMSIG00000009787) #17	Hnrnph1 (ENSMSIG00000009749) #18	ENSMSIG00000009741 #19	Canx (ENSMSIG00000009706) #21	Maml1 (ENSMSIG00000009693) #22	Ltc4s (ENSMSIG00000009669)	Mgat4b (ENSMSIG00000009625) #24	Sqstm1 (ENSMSIG00000009550) #26	Mrnip (ENSMSIG00000009547) #27
Mouse	MODERN SPECIES	2	Or1ad1 (ENSMUSG00000061952)	Or1ad6 (ENSMUSG00000050343)	Prop1 (ENSMUSG00000044542)	4933414I15Rik (ENSMUSG00000072983)	Zfp354b (ENSMUSG00000020335) #8	Zfp2 (ENSMUSG00000049321) #11	Zfp454 (ENSMUSG00000048728) #12	Grm6 (ENSMUSG00000000617) #13	Zfp879 (ENSMUSG00000044296) #14	Zfp354c (ENSMUSG00000044807) #15	Adamts2 (ENSMUSG00000036545) #16	Rufy1 (ENSMUSG00000020375) #17	Hnrnph1 (ENSMUSG00000007850) #18	Cby3 (ENSMUSG00000050087) #19	Canx (ENSMUSG00000020368) #21	Maml1 (ENSMUSG00000050567) #22	Ltc4s (ENSMUSG00000020377)	Mgat4b (ENSMUSG00000036620) #24	Sqstm1 (ENSMUSG00000015837) #26	Mrnip (ENSMUSG00000020381) #27	Tbc1d9b (ENSMUSG00000036644) #28	Rnf130 (ENSMUSG00000020376) #29	Rasgef1c (ENSMUSG00000020374) #30	Mapk9 (ENSMUSG00000020366) #31	Gfpt2 (ENSMUSG00000020363) #32	Cnot6 (ENSMUSG00000020362) #34	Scgb3a1 (ENSMUSG00000064057) #36	Flt4 (ENSMUSG00000020357) #37	Or2y10 (ENSMUSG00000107645)	Or2y11 (ENSMUSG00000095187)	Or2y12 (ENSMUSG00000063827)
Ryukyu mouse	MODERN SPECIES	2	Or1ad6 (MGP_CAROLIEiJ_G0016302)	Prop1 (MGP_CAROLIEiJ_G0016301)	4933414I15Rik (MGP_CAROLIEiJ_G0016300)	Zfp354b (MGP_CAROLIEiJ_G0016299) #8	Zfp2 (MGP_CAROLIEiJ_G0016298) #11	Zfp454 (MGP_CAROLIEiJ_G0016297) #12	Grm6 (MGP_CAROLIEiJ_G0016296) #13	Zfp879 (MGP_CAROLIEiJ_G0016295) #14	Zfp354c (MGP_CAROLIEiJ_G0016294) #15	Adamts2 (MGP_CAROLIEiJ_G0016293) #16	Rufy1 (MGP_CAROLIEiJ_G0016292) #17	MGP_CAROLIEiJ_G0016291 #18	MGP_CAROLIEiJ_G0016290 #19	MGP_CAROLIEiJ_G0016289	Canx (MGP_CAROLIEiJ_G0016288) #21	Maml1 (MGP_CAROLIEiJ_G0016287) #22	Ltc4s (MGP_CAROLIEiJ_G0016286)	Mgat4b (MGP_CAROLIEiJ_G0016285) #24	Sqstm1 (MGP_CAROLIEiJ_G0016284) #26	Mrnip (MGP_CAROLIEiJ_G0016283) #27	Tbc1d9b (MGP_CAROLIEiJ_G0016282) #28	Rnf130 (MGP_CAROLIEiJ_G0016281) #29	Rasgef1c (MGP_CAROLIEiJ_G0016280) #30	Mapk9 (MGP_CAROLIEiJ_G0016279) #31	Gfpt2 (MGP_CAROLIEiJ_G0016278) #32	Cnot6 (MGP_CAROLIEiJ_G0016277) #34	Scgb3a1 (MGP_CAROLIEiJ_G0016276) #36	Flt4 (MGP_CAROLIEiJ_G0016275) #37	MGP_CAROLIEiJ_G0016274	MGP_CAROLIEiJ_G0016273	MGP_CAROLIEiJ_G0016272
Shrew mouse	MODERN SPECIES	5	Or1ad8 (MGP_PahariEiJ_G0017439)	Or1ad1 (MGP_PahariEiJ_G0017438)	Or1ad6 (MGP_PahariEiJ_G0017437)	Prop1 (MGP_PahariEiJ_G0017436)	Zfp354b (MGP_PahariEiJ_G0017434) #8	Zfp2 (MGP_PahariEiJ_G0017433) #11	Zfp454 (MGP_PahariEiJ_G0017432) #12	Grm6 (MGP_PahariEiJ_G0017431) #13	Zfp879 (MGP_PahariEiJ_G0017430) #14	Zfp354c (MGP_PahariEiJ_G0017429) #15	Adamts2 (MGP_PahariEiJ_G0017428) #16	Rufy1 (MGP_PahariEiJ_G0017427) #17	Hnrnph1 (MGP_PahariEiJ_G0017426) #18	Cby3 (MGP_PahariEiJ_G0017425) #19	Canx (MGP_PahariEiJ_G0017424) #21	Maml1 (MGP_PahariEiJ_G0017423) #22	MGP_PahariEiJ_G0017422 #23	Mgat4b (MGP_PahariEiJ_G0017421) #24	Sqstm1 (MGP_PahariEiJ_G0017420) #26	Mrnip (MGP_PahariEiJ_G0017419) #27	Tbc1d9b (MGP_PahariEiJ_G0017418) #28	Rnf130 (MGP_PahariEiJ_G0017417) #29	Rasgef1c (MGP_PahariEiJ_G0017416) #30	Mapk9 (MGP_PahariEiJ_G0017415) #31	Gfpt2 (MGP_PahariEiJ_G0017414) #32	Cnot6 (MGP_PahariEiJ_G0017413) #34	Scgb3a1 (MGP_PahariEiJ_G0017412) #36	Flt4 (MGP_PahariEiJ_G0017411) #37	MGP_PahariEiJ_G0017410	MGP_PahariEiJ_G0017409	Or2y15 (MGP_PahariEiJ_G0017408)
Rat	MODERN SPECIES	1	Or1ad5 (ENSRNOG00000029930)	Or1ad1 (ENSRNOG00000063756)	Or1ad6 (ENSRNOG00000003668)	Prop1 (ENSRNOG00000003671)	ENSRNOG00000067059	Zfp2 (ENSRNOG00000030750) #11	Znf454 (ENSRNOG00000029678) #8	Grm6 (ENSRNOG00000000233) #13	Zfp879 (ENSRNOG00000030517) #14	Zfp354c (ENSRNOG00000029205) #15	Adamts2 (ENSRNOG00000061484) #16	Rufy1 (ENSRNOG00000003536) #17	Hnrnph1 (ENSRNOG00000003399) #18	Cby3 (ENSRNOG00000066223) #19	Canx (ENSRNOG00000003343) #21	Maml1 (ENSRNOG00000003268) #22	Ltc4s (ENSRNOG00000003244)	Mgat4b (ENSRNOG00000003235) #24	Sqstm1 (ENSRNOG00000003147) #26	Mrnip (ENSRNOG00000003068) #27	Tbc1d9b (ENSRNOG00000003050) #28	Rnf130 (ENSRNOG00000046330) #29	Rasgef1c (ENSRNOG00000003005) #30	Mapk9 (ENSRNOG00000002823) #31	Gfpt2 (ENSRNOG00000002810) #32	Cnot6 (ENSRNOG00000054891) #34	Scgb3a1 (ENSRNOG00000002718) #36	Flt4 (ENSRNOG00000002511) #37	LOC102555091 (ENSRNOG00000068579)	Or2y11 (ENSRNOG00000065754)	Or2y12 (ENSRNOG00000070927)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1624					Prop1 (ENSNGAG00000016946)	Zfp2 (ENSNGAG00000015033) #11	Zfp454 (ENSNGAG00000001170) #12	Grm6 (ENSNGAG00000000051) #13	Zfp879 (ENSNGAG00000010850) #14	Zfp354c (ENSNGAG00000013055) #15	Adamts2 (ENSNGAG00000007774) #16	Rufy1 (ENSNGAG00000014023) #17	Hnrnph1 (ENSNGAG00000014666) #18	ENSNGAG00000019073 #19	Canx (ENSNGAG00000009718) #21	Maml1 (ENSNGAG00000007418) #22	ENSNGAG00000019905 #23	Mgat4b (ENSNGAG00000011567) #24	Sqstm1 (ENSNGAG00000000111) #26	Mrnip (ENSNGAG00000019013) #27	Tbc1d9b (ENSNGAG00000020655) #28	ENSNGAG00000013038	Rnf130 (ENSNGAG00000000237) #29	Rasgef1c (ENSNGAG00000020883) #30	Mapk9 (ENSNGAG00000019965) #31	Gfpt2 (ENSNGAG00000014610) #32	Cnot6 (ENSNGAG00000008269) #34	Scgb3a1 (ENSNGAG00000011521) #36	Flt4 (ENSNGAG00000013547) #37
Lesser Egyptian jerboa	MODERN SPECIES	133										Adamts2 (ENSJJAG00000001682) #16	ENSJJAG00000010190	Rufy1 (ENSJJAG00000013513) #17	Hnrnph1 (ENSJJAG00000016203) #18	ENSJJAG00000014052 #19	Canx (ENSJJAG00000022784) #21	Maml1 (ENSJJAG00000023847) #22	ENSJJAG00000019535 #23	Mgat4b (ENSJJAG00000021000) #24	ENSJJAG00000012040 #26	Mrnip (ENSJJAG00000010968) #27	Tbc1d9b (ENSJJAG00000013138) #28	ENSJJAG00000013685	Rnf130 (ENSJJAG00000014438) #29	Rasgef1c (ENSJJAG00000016338) #30	Mapk9 (ENSJJAG00000012308) #31	Gfpt2 (ENSJJAG00000014420) #32	Cnot6 (ENSJJAG00000012296) #34	Scgb3a1 (ENSJJAG00000011541) #36	Flt4 (ENSJJAG00000017737) #37	Sparc (ENSJJAG00000003597)	Fat2 (ENSJJAG00000019929)
Kangaroo rat	MODERN SPECIES	454	Phykpl (ENSDORG00000011023)	Col23a1 (ENSDORG00000011025)	ENSDORG00000024543 #7	Clk4 (ENSDORG00000009760) #7	Zfp354a (ENSDORG00000009396)	Prop1 (ENSDORG00000009397)	Zfp454 (ENSDORG00000029196) #12	Grm6 (ENSDORG00000029560) #13	Zfp2 (ENSDORG00000005936) #11	Zfp354c (ENSDORG00000015602) #15	Adamts2 (ENSDORG00000015603) #16	Rufy1 (ENSDORG00000005452) #17	Hnrnph1 (ENSDORG00000005453) #18	ENSDORG00000024643 #19	Canx (ENSDORG00000002108) #21	Maml1 (ENSDORG00000023567) #22	ENSDORG00000025410 #23	Mgat4b (ENSDORG00000007019) #24	Sqstm1 (ENSDORG00000014852) #26	Tbc1d9b (ENSDORG00000014854) #28	Rnf130 (ENSDORG00000012990) #29	Rasgef1c (ENSDORG00000003918) #30	Mapk9 (ENSDORG00000003921) #31	Gfpt2 (ENSDORG00000003922) #32	Cnot6 (ENSDORG00000001708) #34	Scgb3a1 (ENSDORG00000027422) #36	Flt4 (ENSDORG00000012877) #37	ENSDORG00000024367	ENSDORG00000024307	ENSDORG00000023565	ENSDORG00000028273
Lagomorpha	ANCESTRAL SPECIES	511															ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22
Rabbit	MODERN SPECIES	160																MAML1 (ENSOCUG00000015101) #22
Pika	MODERN SPECIES	9453															CANX (ENSOPRG00000007562) #21	MAML1 (ENSOPRG00000007592) #22
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000178460	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183201.b.b.b.a #22
Hedgehog	MODERN SPECIES	5339																MAML1 (ENSEEUG00000011873) #22
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000178460	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00940000160245 #7	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178460	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Suina	ANCESTRAL SPECIES	11	ENSGT00940000160245 #7	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178460	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Chacoan peccary	MODERN SPECIES	203	CLK4 (ENSCWAG00000000896) #7	ZNF354A (ENSCWAG00000000870)	ENSCWAG00000000855	PROP1 (ENSCWAG00000000841)	ZNF354B (ENSCWAG00000000786) #8	ZFP2 (ENSCWAG00000000774) #11	ZNF454 (ENSCWAG00000000753) #12	GRM6 (ENSCWAG00000000721) #13	ZNF879 (ENSCWAG00000000708) #14	ZNF354C (ENSCWAG00000000692) #15	ADAMTS2 (ENSCWAG00000000631) #16	RUFY1 (ENSCWAG00000000548) #17	HNRNPH1 (ENSCWAG00000000465) #18	ENSCWAG00000000440 #19	CANX (ENSCWAG00000000423) #21	MAML1 (ENSCWAG00000000338) #22	LTC4S (ENSCWAG00000000309) #23	MGAT4B (ENSCWAG00000000289) #24	SQSTM1 (ENSCWAG00000000263) #26	MRNIP (ENSCWAG00000000234) #27	TBC1D9B (ENSCWAG00000000150) #28	RNF130 (ENSCWAG00000000068) #29	RASGEF1C (ENSCWAG00000021970) #30	MAPK9 (ENSCWAG00000021969) #31	GFPT2 (ENSCWAG00000021968) #32	CNOT6 (ENSCWAG00000021966) #34	ENSCWAG00000021965 #35	SCGB3A1 (ENSCWAG00000021964) #36	FLT4 (ENSCWAG00000021963) #37	ENSCWAG00000021962
Pig	MODERN SPECIES	10	PROP1 (ENSSSCG00000029569)	MSANTD5 (ENSSSCG00000042891)	ENSSSCG00000034785	ZNF354B (ENSSSCG00000028295) #8	ZFP2 (ENSSSCG00000029380) #11	ZNF454 (ENSSSCG00000027351) #12	GRM6 (ENSSSCG00000014027) #13	ZNF879 (ENSSSCG00000052203) #14	ZNF354C (ENSSSCG00000021640) #15	ADAMTS2 (ENSSSCG00000024043) #16	RUFY1 (ENSSSCG00000014023) #17	HNRNPH1 (ENSSSCG00000014022) #18	ENSSSCG00000063154	ENSSSCG00000014021 #19	CANX (ENSSSCG00000014020) #21	MAML1 (ENSSSCG00000014019) #22	LTC4S (ENSSSCG00000028488) #23	MGAT4B (ENSSSCG00000014017) #24	SQSTM1 (ENSSSCG00000014016) #26	ENSSSCG00000014015 #27	TBC1D9B (ENSSSCG00000014014) #28	ENSSSCG00000055787	RNF130 (ENSSSCG00000057993) #29	RASGEF1C (ENSSSCG00000014011) #30	MAPK9 (ENSSSCG00000014010) #31	GFPT2 (ENSSSCG00000014012) #32	ENSSSCG00000059175	CNOT6 (ENSSSCG00000014009) #34	ENSSSCG00000049258	SCGB3A1 (ENSSSCG00000014008) #36	FLT4 (ENSSSCG00000014007) #37
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00940000159618	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00940000162292	ENSGT00940000162330
Camelidae	ANCESTRAL SPECIES	57	ENSGT00940000160245 #7	ENSGT00940000161487	ENSGT00940000162292	ENSGT00940000162330	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000159358 #37
Alpaca	MODERN SPECIES	1422																ENSVPAG00000012315 #22
Arabian camel	MODERN SPECIES	14	CLK4 (ENSCDRG00005007120) #7	ZNF354A (ENSCDRG00005007068)	PROP1 (ENSCDRG00005007026)	ENSCDRG00005007004	ZNF354B (ENSCDRG00005006982) #8	ZFP2 (ENSCDRG00005006933) #11	ZNF454 (ENSCDRG00005006909) #12	GRM6 (ENSCDRG00005006835) #13	ZNF879 (ENSCDRG00005006793) #14	ZNF354C (ENSCDRG00005006750) #15	ADAMTS2 (ENSCDRG00005005953) #16	RUFY1 (ENSCDRG00005005851) #17	HNRNPH1 (ENSCDRG00005005774) #18	ENSCDRG00005005737 #19	CANX (ENSCDRG00005005708) #21	MAML1 (ENSCDRG00005005672) #22	LTC4S (ENSCDRG00005005617) #23	MGAT4B (ENSCDRG00005005565) #24	SQSTM1 (ENSCDRG00005005528) #26	MRNIP (ENSCDRG00005005511) #27	ENSCDRG00005005487 #28	ENSCDRG00005005418 #28	RNF130 (ENSCDRG00005005219) #29	RASGEF1C (ENSCDRG00005005101) #30	MAPK9 (ENSCDRG00005004915) #31	GFPT2 (ENSCDRG00005004782) #32	CNOT6 (ENSCDRG00005004730) #34	FLT4 (ENSCDRG00005004434) #37	FAM110C (ENSCDRG00005004377)	ENSCDRG00005004355	ENSCDRG00005004311
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00940000159618	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00940000162292	ENSGT00940000162330
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000159618	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00950000184876	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00940000162292
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000159618	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00950000184876	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00940000162292
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000159618	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00950000184876	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00940000162292
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000155143.mb.b.a	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT01050000244986.b.b.b.b.d.b.b.b.a.b.b.a	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00950000184876	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00940000162292
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000154494.a.b	ENSGT00950000182843.b	ENSGT00940000159380	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000155143.mb.b.a	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT01050000244986.b.b.b.b.d.b.b.b.a.b.b.a	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00950000184876	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00940000162292
Beluga whale	MODERN SPECIES	93	JMJD4 (ENSDLEG00000012232)	ZNF354B (ENSDLEG00000012249) #8	ZFP2 (ENSDLEG00000012263) #11	ZNF454 (ENSDLEG00000012270) #12	GRM6 (ENSDLEG00000012287) #13	ENSDLEG00000012347	ZNF879 (ENSDLEG00000012354) #14	ZNF354C (ENSDLEG00000012363) #15	ADAMTS2 (ENSDLEG00000012411) #16	ENSDLEG00000012767	ENSDLEG00000012788	RUFY1 (ENSDLEG00000012804) #17	ENSDLEG00000012869 #18	ENSDLEG00000012884 #19	CANX (ENSDLEG00000016884) #21	MAML1 (ENSDLEG00000016920) #22	LTC4S (ENSDLEG00000016932) #23	MGAT4B (ENSDLEG00000016952) #24	SQSTM1 (ENSDLEG00000016971) #26	MRNIP (ENSDLEG00000016990) #27	TBC1D9B (ENSDLEG00000017012) #28	RNF130 (ENSDLEG00000017108) #29	ENSDLEG00000017141	RASGEF1C (ENSDLEG00000017170) #30	MAPK9 (ENSDLEG00000017214) #31	GFPT2 (ENSDLEG00000017242) #32	CNOT6 (ENSDLEG00000017285) #34	FLT4 (ENSDLEG00000017328) #37
Narwhal	MODERN SPECIES	298	SNAP47 (ENSMMNG00015003455)	JMJD4 (ENSMMNG00015003436)	ZNF354B (ENSMMNG00015003424) #8	ZFP2 (ENSMMNG00015003397) #11	ZNF454 (ENSMMNG00015003376) #12	GRM6 (ENSMMNG00015003345) #13	ENSMMNG00015003325	ZNF879 (ENSMMNG00015003310) #14	ZNF354C (ENSMMNG00015003290) #15	ENSMMNG00015003278	ADAMTS2 (ENSMMNG00015003260) #16	RUFY1 (ENSMMNG00015003190) #17	ENSMMNG00015003071 #18	ENSMMNG00015003017 #19	CANX (ENSMMNG00015002989) #21	MAML1 (ENSMMNG00015002970) #22	ENSMMNG00015002960	LTC4S (ENSMMNG00015002934) #23	MGAT4B (ENSMMNG00015002877) #24	SQSTM1 (ENSMMNG00015002834) #26	MRNIP (ENSMMNG00015002797) #27	TBC1D9B (ENSMMNG00015002749) #28	ENSMMNG00015002734	RNF130 (ENSMMNG00015002719) #29	RASGEF1C (ENSMMNG00015002676) #30	MAPK9 (ENSMMNG00015002611) #31	GFPT2 (ENSMMNG00015002552) #32	CNOT6 (ENSMMNG00015002512) #34	FLT4 (ENSMMNG00015002382) #37	ENSMMNG00015002341	PROP1 (ENSMMNG00015002318)
Vaquita	MODERN SPECIES	14	WNT9A (ENSPSNG00000007743)	PRSS38 (ENSPSNG00000007771)	SNAP47 (ENSPSNG00000007830)	JMJD4 (ENSPSNG00000007858)	ZNF354B (ENSPSNG00000007886) #8	ZFP2 (ENSPSNG00000007917) #11	ZNF454 (ENSPSNG00000007949) #12	GRM6 (ENSPSNG00000007996) #13	ENSPSNG00000008070	ZNF879 (ENSPSNG00000008106) #14	ADAMTS2 (ENSPSNG00000008224) #16	RUFY1 (ENSPSNG00000008611) #17	ENSPSNG00000008738 #18	CBY3 (ENSPSNG00000008816) #19	CANX (ENSPSNG00000008859) #21	MAML1 (ENSPSNG00000008918) #22	ENSPSNG00000008956	LTC4S (ENSPSNG00000008981) #23	MGAT4B (ENSPSNG00000009081) #24	SQSTM1 (ENSPSNG00000009189) #26	MRNIP (ENSPSNG00000009411) #27	TBC1D9B (ENSPSNG00000009691) #28	RNF130 (ENSPSNG00000009870) #29	ENSPSNG00000009979	RASGEF1C (ENSPSNG00000010035) #30	MAPK9 (ENSPSNG00000010316) #31	GFPT2 (ENSPSNG00000010506) #32	CNOT6 (ENSPSNG00000010601) #34	FLT4 (ENSPSNG00000010686) #37	PROP1 (ENSPSNG00000011406)	ENSPSNG00000011445
Dolphin	MODERN SPECIES	2088													RUFY1 (ENSTTRG00000000468) #17	HNRNPH1 (ENSTTRG00000000470) #18	CANX (ENSTTRG00000000475) #21	MAML1 (ENSTTRG00000000477) #22
Sperm whale	MODERN SPECIES	11	SNAP47 (ENSPCTG00005001687)	JMJD4 (ENSPCTG00005001672)	ZNF354B (ENSPCTG00005001661) #8	ZFP2 (ENSPCTG00005001642) #11	ZNF454 (ENSPCTG00005001630) #12	GRM6 (ENSPCTG00005001608) #13	ENSPCTG00005001587	ZNF879 (ENSPCTG00005001578) #14	ZNF354C (ENSPCTG00005001563) #15	ADAMTS2 (ENSPCTG00005001538) #16	ENSPCTG00005001527	RUFY1 (ENSPCTG00005001444) #17	HNRNPH1 (ENSPCTG00005001402) #18	ENSPCTG00005001383 #19	CANX (ENSPCTG00005001359) #21	MAML1 (ENSPCTG00005001342) #22	LTC4S (ENSPCTG00005001322) #23	MGAT4B (ENSPCTG00005001282) #24	SQSTM1 (ENSPCTG00005001251) #26	MRNIP (ENSPCTG00005001159) #27	TBC1D9B (ENSPCTG00005001115) #28	ENSPCTG00005001087	RNF130 (ENSPCTG00005001071) #29	RASGEF1C (ENSPCTG00005001021) #30	MAPK9 (ENSPCTG00005000942) #31	GFPT2 (ENSPCTG00005000865) #32	CNOT6 (ENSPCTG00005000832) #34	ENSPCTG00005000813 #36	FLT4 (ENSPCTG00005000690) #37	ENSPCTG00005000649	ENSPCTG00005000638
Blue whale	MODERN SPECIES	14	PRSS38 (ENSBMSG00010008714)	SNAP47 (ENSBMSG00010008703)	JMJD4 (ENSBMSG00010008694)	ZNF354B (ENSBMSG00010008689) #8	ZFP2 (ENSBMSG00010008682) #11	ZNF454 (ENSBMSG00010008671) #12	GRM6 (ENSBMSG00010008657) #13	ZNF879 (ENSBMSG00010008639) #14	ENSBMSG00010008598	ENSBMSG00010008587 #16	ENSBMSG00010008570	RUFY1 (ENSBMSG00010008550) #17	HNRNPH1 (ENSBMSG00010008502) #18	CBY3 (ENSBMSG00010008469) #19	CANX (ENSBMSG00010008443) #21	MAML1 (ENSBMSG00010008423) #22	LTC4S (ENSBMSG00010008396) #23	MGAT4B (ENSBMSG00010008352) #24	SQSTM1 (ENSBMSG00010008322) #26	MRNIP (ENSBMSG00010008305) #27	TBC1D9B (ENSBMSG00010008220) #28	ENSBMSG00010008160	RNF130 (ENSBMSG00010008132) #29	RASGEF1C (ENSBMSG00010008098) #30	ENSBMSG00010008086 #31	GFPT2 (ENSBMSG00010008079) #32	ENSBMSG00010008071	CNOT6 (ENSBMSG00010008051) #34	ENSBMSG00010008030 #36	FLT4 (ENSBMSG00010007965) #37	ENSBMSG00010007951
Pecora	ANCESTRAL SPECIES		ENSGT00940000162155	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b	ENSGT01100000263474.a.b.b.e.b.a.a	ENSGT00390000009510	ENSGT00390000008694.b.b.c.b.cb.b	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Percora_a	ANCESTRAL SPECIES		ENSGT00940000162155	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b	ENSGT01100000263474.a.b.b.e.b.a.a	ENSGT00390000009510	ENSGT00390000008694.b.b.c.b.cb.b	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000159358 #37
Bovidae	ANCESTRAL SPECIES		ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b	ENSGT01100000263474.a.b.b.e.b.a.a	ENSGT00390000009510	ENSGT00390000008694.b.b.c.b.cb.b	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000008903.g.b.b	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000159358 #37
Caprinae	ANCESTRAL SPECIES	32	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b	ENSGT01100000263474.a.b.b.e.b.a.a	ENSGT00390000009510	ENSGT00390000008694.b.b.c.b.cb.b	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334.a #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000008903.g.b.b	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000159358 #37
Rambouillet Sheep	MODERN SPECIES	21	H3-4 (ENSOARG00020016979)	H2AC25 (ENSOARG00020016951)	HIST3H2BB (ENSOARG00020016921)	RNF187 (ENSOARG00020016886)	ZFP2 (ENSOARG00020016872) #11	ZNF454 (ENSOARG00020016811) #12	GRM6 (ENSOARG00020016554) #13	ZNF354C (ENSOARG00020016338) #15	ENSOARG00020016295	ADAMTS2 (ENSOARG00020015867) #16	ENSOARG00020015796	ENSOARG00020015427 #17	HNRNPH1 (ENSOARG00020015212) #18	ENSOARG00020015166 #19	CANX (ENSOARG00020014950) #21	MAML1 (ENSOARG00020014863) #22	LTC4S (ENSOARG00020014721) #23	MGAT4B (ENSOARG00020014516) #24	ENSOARG00020014482	SQSTM1 (ENSOARG00020014013) #26	ENSOARG00020013856 #27	ENSOARG00020013782 #28	ENSOARG00020013747	ENSOARG00020013692	RNF130 (ENSOARG00020013456) #29	RASGEF1C (ENSOARG00020013195) #30	MAPK9 (ENSOARG00020011303) #31	GFPT2 (ENSOARG00020010818) #32	ENSOARG00020010644	ENSOARG00020010506	CNOT6 (ENSOARG00020010403) #34
Goat	MODERN SPECIES	26	H3-4 (ENSCHIG00000008243)	H2AC25 (ENSCHIG00000006649)	H2BC26 (ENSCHIG00000009284)	RNF187 (ENSCHIG00000012732)	ENSCHIG00000025835	ZFP2 (ENSCHIG00000010314) #11	ZNF454 (ENSCHIG00000013008) #12	GRM6 (ENSCHIG00000024892) #13	ZNF879 (ENSCHIG00000020873) #14	ZNF354C (ENSCHIG00000014371) #15	ADAMTS2 (ENSCHIG00000027055) #16	RUFY1 (ENSCHIG00000025380) #17	HNRNPH1 (ENSCHIG00000021285) #18	CBY3 (ENSCHIG00000015238) #19	CANX (ENSCHIG00000000679) #21	MAML1 (ENSCHIG00000024765) #22	LTC4S (ENSCHIG00000026999) #23	MGAT4B (ENSCHIG00000010088) #24	ENSCHIG00000000618	SQSTM1 (ENSCHIG00000022932) #26	MRNIP (ENSCHIG00000017185) #27	TBC1D9B (ENSCHIG00000009249) #28	RNF130 (ENSCHIG00000026077) #29	ENSCHIG00000011545	RASGEF1C (ENSCHIG00000021172) #30	MAPK9 (ENSCHIG00000013958) #31	ENSCHIG00000002362	GFPT2 (ENSCHIG00000025952) #32	ENSCHIG00000024902	CNOT6 (ENSCHIG00000019100) #34	FLT4 (ENSCHIG00000013670) #37
Bovinae	ANCESTRAL SPECIES	34	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b	ENSGT01100000263474.a.b.b.e.b.a.a	ENSGT00390000009510	ENSGT00390000008694.b.b.c.b.cb.b	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000008903.g.b.b	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000159358 #37
Bos	ANCESTRAL SPECIES	34	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b	ENSGT01100000263474.a.b.b.e.b.a.a	ENSGT00390000009510	ENSGT00390000008694.b.b.c.b.cb.b	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000008903.g.b.b	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000159358 #37
Bos_a	ANCESTRAL SPECIES	29	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b	ENSGT01100000263474.a.b.b.e.b.a.a	ENSGT00390000009510	ENSGT00390000008694.b.b.c.b.cb.b	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000008903.g.b.b	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000159358 #37	ENSGT01100000263496.C.c.b.c.b.h.a.b.b
Wild yak	MODERN SPECIES	562														ENSBMUG00000014775 #19	CANX (ENSBMUG00000014802) #21	MAML1 (ENSBMUG00000014817) #22	LTC4S (ENSBMUG00000014843) #23	MGAT4B (ENSBMUG00000014867) #24	SQSTM1 (ENSBMUG00000014880) #26	MRNIP (ENSBMUG00000014911) #27	ENSBMUG00000014921 #28	ENSBMUG00000014931 #28	RNF130 (ENSBMUG00000014992) #29
Domestic yak	MODERN SPECIES	27	ENSBGRG00000003415	H3-4 (ENSBGRG00000003421)	H2AC25 (ENSBGRG00000003429)	RNF187 (ENSBGRG00000003438)	ENSBGRG00000003452	ZNF454 (ENSBGRG00000003460) #12	GRM6 (ENSBGRG00000003481) #13	ZNF354C (ENSBGRG00000003526) #15	ADAMTS2 (ENSBGRG00000003554) #16	ENSBGRG00000003653	ENSBGRG00000003670	RUFY1 (ENSBGRG00000003711) #17	HNRNPH1 (ENSBGRG00000003913) #18	CBY3 (ENSBGRG00000004121) #19	CANX (ENSBGRG00000004174) #21	MAML1 (ENSBGRG00000004268) #22	LTC4S (ENSBGRG00000004319) #23	MGAT4B (ENSBGRG00000004400) #24	SQSTM1 (ENSBGRG00000004587) #26	ENSBGRG00000004761	MRNIP (ENSBGRG00000004791) #27	TBC1D9B (ENSBGRG00000004939) #28	RNF130 (ENSBGRG00000005434) #29	RASGEF1C (ENSBGRG00000005599) #30	MAPK9 (ENSBGRG00000005703) #31	GFPT2 (ENSBGRG00000005946) #32	CNOT6 (ENSBGRG00000006042) #34	FLT4 (ENSBGRG00000006109) #37	ENSBGRG00000006323	ENSBGRG00000004259	ENSBGRG00000004267
Bos_b	ANCESTRAL SPECIES	36	ENSGT00940000160371	ENSGT00940000162155	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b	ENSGT01100000263474.a.b.b.e.b.a.a	ENSGT00390000009510	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000008903.g.b.b	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000159358 #37	ENSGT01100000263496.C.c.b.c.b.h.a.b.b	ENSGT00940000154537.o.b.a.b	ENSGT00940000154537.o.b.a.a.b.b
Hybrid Bos Indicus	MODERN SPECIES	26	TRIM11 (ENSBIXG00005029289)	TRIM17 (ENSBIXG00005029306)	H3-4 (ENSBIXG00005029320)	ENSBIXG00005029327	H2AC25 (ENSBIXG00005029330)	H2BC26 (ENSBIXG00005029334)	RNF187 (ENSBIXG00005029336)	ZNF454 (ENSBIXG00005029356) #12	GRM6 (ENSBIXG00005029370) #13	ZNF354C (ENSBIXG00005029390) #15	ADAMTS2 (ENSBIXG00005029444) #16	RUFY1 (ENSBIXG00005029537) #17	HNRNPH1 (ENSBIXG00005029588) #18	ENSBIXG00005029650 #19	CANX (ENSBIXG00005029662) #21	MAML1 (ENSBIXG00005029688) #22	LTC4S (ENSBIXG00005029703) #23	MGAT4B (ENSBIXG00005029717) #24	SQSTM1 (ENSBIXG00005029735) #26	TBC1D9B (ENSBIXG00005029826) #28	RNF130 (ENSBIXG00005029909) #29	RASGEF1C (ENSBIXG00005029974) #30	MAPK9 (ENSBIXG00005030066) #31	GFPT2 (ENSBIXG00005030150) #32	ENSBIXG00005030167	CNOT6 (ENSBIXG00005030187) #34	FLT4 (ENSBIXG00005030226) #37	ENSBIXG00005030277	ENSBIXG00005030287	ENSBIXG00005030304	ENSBIXG00005030312
Cow	MODERN SPECIES	26	H2BC26 (ENSBTAG00000053467)	RNF187 (ENSBTAG00000019667)	ENSBTAG00000052690	ZFP2 (ENSBTAG00000007122) #11	ZNF454 (ENSBTAG00000004262) #12	GRM6 (ENSBTAG00000016187) #13	ENSBTAG00000034973	ZNF879 (ENSBTAG00000038541) #14	ENSBTAG00000055301	ZNF354C (ENSBTAG00000002281) #15	ADAMTS2 (ENSBTAG00000014665) #16	RUFY1 (ENSBTAG00000019868) #17	HNRNPH1 (ENSBTAG00000009389) #18	CBY3 (ENSBTAG00000046663) #19	CANX (ENSBTAG00000048107) #21	MAML1 (ENSBTAG00000050347) #22	LTC4S (ENSBTAG00000009737) #23	MGAT4B (ENSBTAG00000009738) #24	ENSBTAG00000052483	SQSTM1 (ENSBTAG00000015591) #26	MRNIP (ENSBTAG00000015602) #27	TBC1D9B (ENSBTAG00000015611) #28	RNF130 (ENSBTAG00000004856) #29	RASGEF1C (ENSBTAG00000055156) #30	MAPK9 (ENSBTAG00000004709) #31	GFPT2 (ENSBTAG00000002215) #32	CNOT6 (ENSBTAG00000017362) #34	FLT4 (ENSBTAG00000001462) #37	ENSBTAG00000037602	OR5W39 (ENSBTAG00000040610)	ENSBTAG00000050327
American bison	MODERN SPECIES	3366	ENSBBBG00000012856	H2AC25 (ENSBBBG00000002529)	H2BC26 (ENSBBBG00000012861)	ENSBBBG00000012877	ENSBBBG00000012896	ZFP2 (ENSBBBG00000012903) #11	ZNF454 (ENSBBBG00000012911) #12	GRM6 (ENSBBBG00000002558) #13	ZNF879 (ENSBBBG00000012952) #14	ZNF354C (ENSBBBG00000012969) #15	ADAMTS2 (ENSBBBG00000013027) #16	RUFY1 (ENSBBBG00000013083) #17	HNRNPH1 (ENSBBBG00000002667) #18	CBY3 (ENSBBBG00000013250) #19	CANX (ENSBBBG00000001618) #21	MAML1 (ENSBBBG00000002705) #22	LTC4S (ENSBBBG00000013326) #23	MGAT4B (ENSBBBG00000001606) #24	ENSBBBG00000002719	SQSTM1 (ENSBBBG00000013370) #26	ENSBBBG00000013424 #27	ENSBBBG00000013442 #28	ENSBBBG00000013465 #28	RNF130 (ENSBBBG00000013530) #29	RASGEF1C (ENSBBBG00000002819) #30	MAPK9 (ENSBBBG00000002942) #31	GFPT2 (ENSBBBG00000013816) #32
Siberian musk deer	MODERN SPECIES	37										ENSMMSG00000005088	RUFY1 (ENSMMSG00000015267) #17	ENSMMSG00000015206 #18	ENSMMSG00000015194	CBY3 (ENSMMSG00000015178) #19	CANX (ENSMMSG00000015133) #21	MAML1 (ENSMMSG00000015102) #22	LTC4S (ENSMMSG00000015079) #23	MGAT4B (ENSMMSG00000015039) #24	SQSTM1 (ENSMMSG00000014995) #26	MRNIP (ENSMMSG00000014972) #27	TBC1D9B (ENSMMSG00000014868) #28	RNF130 (ENSMMSG00000014811) #29	ENSMMSG00000014794	RASGEF1C (ENSMMSG00000014739) #30	ENSMMSG00000014721	MAPK9 (ENSMMSG00000014591) #31	GFPT2 (ENSMMSG00000014477) #32	CNOT6 (ENSMMSG00000014444) #34	ADAMTS2 (ENSMMSG00000014340) #16
Yarkand deer	MODERN SPECIES	32	ENSCHYG00000009333	ENSCHYG00000009280	ZFP2 (ENSCHYG00000009266) #11	ZNF454 (ENSCHYG00000009231) #12	GRM6 (ENSCHYG00000025499) #13	ZNF879 (ENSCHYG00000025473) #14	ZNF354C (ENSCHYG00000025442) #15	ENSCHYG00000025422	ADAMTS2 (ENSCHYG00000025226) #16	RUFY1 (ENSCHYG00000025163) #17	HNRNPH1 (ENSCHYG00000025070) #18	ENSCHYG00000025060	ENSCHYG00000025054	ENSCHYG00000025001 #19	CANX (ENSCHYG00000024917) #21	MAML1 (ENSCHYG00000024853) #22	LTC4S (ENSCHYG00000024793) #23	MGAT4B (ENSCHYG00000024710) #24	ENSCHYG00000024695	SQSTM1 (ENSCHYG00000024608) #26	MRNIP (ENSCHYG00000024479) #27	TBC1D9B (ENSCHYG00000024054) #28	ENSCHYG00000023803 #29	RASGEF1C (ENSCHYG00000023602) #30	MAPK9 (ENSCHYG00000023318) #31	ENSCHYG00000023280	GFPT2 (ENSCHYG00000023155) #32	CNOT6 (ENSCHYG00000023069) #34	SCGB3A1 (ENSCHYG00000023043) #36	FLT4 (ENSCHYG00000022355) #37	ENSCHYG00000022304
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00940000161487	ENSGT00940000162330	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000178460	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36
Carnivora	ANCESTRAL SPECIES	8	ENSGT00940000164840	ENSGT00940000162292	ENSGT00940000162330	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Caniformia	ANCESTRAL SPECIES	5	ENSGT00940000164840	ENSGT00940000162292	ENSGT00940000162330	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00940000164840	ENSGT00940000162292	ENSGT00940000162330	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Ursidae	ANCESTRAL SPECIES	16	ENSGT00940000164840	ENSGT00940000162292	ENSGT00940000162330	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
Ursus	ANCESTRAL SPECIES	111	ENSGT00940000161487	ENSGT00940000162292	ENSGT00940000162330	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029
American black bear	MODERN SPECIES	1385											RUFY1 (ENSUAMG00000011441) #17	HNRNPH1 (ENSUAMG00000011445) #18	CBY3 (ENSUAMG00000011449) #19	CANX (ENSUAMG00000011464) #21	ENSUAMG00000012546	MAML1 (ENSUAMG00000012550) #22	MGAT4B (ENSUAMG00000012554) #24	ENSUAMG00000012575 #23
Polar bear	MODERN SPECIES	336	ENSUMAG00000023920	CLK4 (ENSUMAG00000023922) #7	ZNF354A (ENSUMAG00000023923)	PROP1 (ENSUMAG00000023925)	ENSUMAG00000023927	ZNF354B (ENSUMAG00000023928) #8	ZFP2 (ENSUMAG00000023929) #11	ZNF454 (ENSUMAG00000023930) #12	ZNF354C (ENSUMAG00000023932) #15	ZNF879 (ENSUMAG00000023935) #14	ADAMTS2 (ENSUMAG00000023952) #16	RUFY1 (ENSUMAG00000024119) #17	HNRNPH1 (ENSUMAG00000024131) #18	CANX (ENSUMAG00000024212) #21	ENSUMAG00000024214	MAML1 (ENSUMAG00000024215) #22	MGAT4B (ENSUMAG00000024217) #24	ENSUMAG00000024218 #26	ENSUMAG00000024219 #27	TBC1D9B (ENSUMAG00000024277) #28	RNF130 (ENSUMAG00000024538) #29	RASGEF1C (ENSUMAG00000024544) #30	MAPK9 (ENSUMAG00000024571) #31	GFPT2 (ENSUMAG00000024574) #32	CNOT6 (ENSUMAG00000024577) #34	ENSUMAG00000024578 #35	ENSUMAG00000024580 #36	FLT4 (ENSUMAG00000024583) #37	ENSUMAG00000024595	ENSUMAG00000024596	ENSUMAG00000024597
Giant Panda	MODERN SPECIES	13	COL23A1 (ENSAMEG00000006381)	CLK4 (ENSAMEG00000009109) #7	ZNF354A (ENSAMEG00000009107)	ENSAMEG00000020203	PROP1 (ENSAMEG00000030265)	ENSAMEG00000023808	ENSAMEG00000023862	ZNF354B (ENSAMEG00000009090) #8	ZNF454 (ENSAMEG00000030594) #12	GRM6 (ENSAMEG00000009029) #13	ZNF354C (ENSAMEG00000009025) #15	ENSAMEG00000008993 #16	HNRNPH1 (ENSAMEG00000008888) #18	CBY3 (ENSAMEG00000026250) #19	CANX (ENSAMEG00000008836) #21	MAML1 (ENSAMEG00000008832) #22	LTC4S (ENSAMEG00000008821) #23	MGAT4B (ENSAMEG00000008776) #24	SQSTM1 (ENSAMEG00000008746) #26	MRNIP (ENSAMEG00000008734) #27	TBC1D9B (ENSAMEG00000008647) #28	RNF130 (ENSAMEG00000008631) #29	RASGEF1C (ENSAMEG00000000806) #30	MAPK9 (ENSAMEG00000000853) #31	GFPT2 (ENSAMEG00000000889) #32	CNOT6 (ENSAMEG00000000949) #34	ENSAMEG00000026585 #35	ENSAMEG00000000972 #36	ENSAMEG00000000974 #37	ENSAMEG00000027505	ENSAMEG00000019809
Mustelinae	ANCESTRAL SPECIES	92	ENSGT00940000164840	ENSGT00940000162292	ENSGT00940000162330	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000153503.a.a #18	ENSGT00940000158334 #17	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00900000143807 #35	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00950000183007.a.b.g.a.b.b.b.b
American mink	MODERN SPECIES	311	ENSNVIG00000009570	ZNF354B (ENSNVIG00000009575) #8	ZFP2 (ENSNVIG00000009587) #11	ZNF454 (ENSNVIG00000009594) #12	GRM6 (ENSNVIG00000009613) #13	ZNF879 (ENSNVIG00000009657) #14	ZNF354C (ENSNVIG00000009666) #15	ADAMTS2 (ENSNVIG00000009679) #16	ENSNVIG00000009731	RUFY1 (ENSNVIG00000009742) #17	HNRNPH1 (ENSNVIG00000009779) #18	ENSNVIG00000009885 #19	ENSNVIG00000009895	CANX (ENSNVIG00000009897) #21	ENSNVIG00000009926	MAML1 (ENSNVIG00000009929) #22	ENSNVIG00000009938 #23	MGAT4B (ENSNVIG00000009946) #24	SQSTM1 (ENSNVIG00000009967) #26	MRNIP (ENSNVIG00000009983) #27	TBC1D9B (ENSNVIG00000010040) #28	RNF130 (ENSNVIG00000010105) #29	RASGEF1C (ENSNVIG00000010169) #30	MAPK9 (ENSNVIG00000010230) #31	GFPT2 (ENSNVIG00000010374) #32	CNOT6 (ENSNVIG00000010410) #34	ENSNVIG00000010457 #35	ENSNVIG00000010463 #36	FLT4 (ENSNVIG00000010481) #37	ENSNVIG00000010621	ENSNVIG00000010627
Ferret	MODERN SPECIES	230	ENSMPUG00000018461	ENSMPUG00000000730	PROP1 (ENSMPUG00000000729)	ZNF354B (ENSMPUG00000000728) #8	ZFP2 (ENSMPUG00000018460) #11	ZNF454 (ENSMPUG00000000725) #12	GRM6 (ENSMPUG00000000702) #13	ZNF879 (ENSMPUG00000000701) #14	ZNF354C (ENSMPUG00000000700) #15	ADAMTS2 (ENSMPUG00000000699) #16	ENSMPUG00000000697	HNRNPH1 (ENSMPUG00000000693) #18	RUFY1 (ENSMPUG00000000690) #17	CBY3 (ENSMPUG00000018459) #19	CANX (ENSMPUG00000000686) #21	MAML1 (ENSMPUG00000000684) #22	LTC4S (ENSMPUG00000000668) #23	MGAT4B (ENSMPUG00000000665) #24	SQSTM1 (ENSMPUG00000000653) #26	MRNIP (ENSMPUG00000000636) #27	TBC1D9B (ENSMPUG00000000629) #28	RNF130 (ENSMPUG00000000598) #29	RASGEF1C (ENSMPUG00000000596) #30	MAPK9 (ENSMPUG00000000593) #31	GFPT2 (ENSMPUG00000000590) #32	CNOT6 (ENSMPUG00000000587) #34	SCGB3A1 (ENSMPUG00000000584) #36	FLT4 (ENSMPUG00000000579) #37	ENSMPUG00000000578	ENSMPUG00000000575	ENSMPUG00000000573
Canidae	ANCESTRAL SPECIES	9	ENSGT00940000161487	ENSGT00940000162292	ENSGT00940000162330	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000159358 #37	ENSGT00940000153253.b.a.h	ENSGT00950000183007.a.b.g.b.a.a.a	ENSGT00950000183007.a.b.g.a.b.b.a	ENSGT00950000183007.a.b.g.a.a
Canis_lupus	ANCESTRAL SPECIES	15	ENSGT00390000008029.d	ENSGT00940000162292	ENSGT00940000162330	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00950000182802.A.bb	ENSGT00940000158978 #34	ENSGT00940000159358 #37	ENSGT00940000153253.b.a.h	ENSGT00950000183007.a.b.g.b.a.a.a	ENSGT00950000183007.a.b.g.a.b.b.a
Dingo	MODERN SPECIES	238	ENSCAFG00020003580	PROP1 (ENSCAFG00020003569)	ENSCAFG00020003565	ZNF354B (ENSCAFG00020003559) #8	ZFP2 (ENSCAFG00020003554) #11	ZNF454 (ENSCAFG00020003550) #12	GRM6 (ENSCAFG00020003534) #13	ZNF879 (ENSCAFG00020003529) #14	ZNF354C (ENSCAFG00020003521) #15	ADAMTS2 (ENSCAFG00020002876) #16	RUFY1 (ENSCAFG00020002806) #17	HNRNPH1 (ENSCAFG00020002712) #18	CBY3 (ENSCAFG00020002701) #19	CANX (ENSCAFG00020002678) #21	ENSCAFG00020002674	MAML1 (ENSCAFG00020002665) #22	LTC4S (ENSCAFG00020002654) #23	MGAT4B (ENSCAFG00020002640) #24	SQSTM1 (ENSCAFG00020002634) #26	MRNIP (ENSCAFG00020002630) #27	TBC1D9B (ENSCAFG00020002609) #28	RNF130 (ENSCAFG00020002599) #29	RASGEF1C (ENSCAFG00020002586) #30	MAPK9 (ENSCAFG00020002569) #31	GFPT2 (ENSCAFG00020002548) #32	ENSCAFG00020002544	ENSCAFG00020002541	CNOT6 (ENSCAFG00020002441) #34	FLT4 (ENSCAFG00020002415) #37	ENSCAFG00020002411	ENSCAFG00020002403
Dog	MODERN SPECIES	2	CLK4 (ENSCAFG00845009410) #7	ENSCAFG00845009369	ZNF354A (ENSCAFG00845009328)	PROP1 (ENSCAFG00845009295)	OR1AD1 (ENSCAFG00845009275)	ZNF354B (ENSCAFG00845009251) #8	ZFP2 (ENSCAFG00845009219) #11	ZNF454 (ENSCAFG00845009113) #12	GRM6 (ENSCAFG00845009049) #13	ZNF879 (ENSCAFG00845008945) #14	ADAMTS2 (ENSCAFG00845008674) #16	RUFY1 (ENSCAFG00845008457) #17	HNRNPH1 (ENSCAFG00845008269) #18	ENSCAFG00845008156 #19	CANX (ENSCAFG00845008030) #21	MAML1 (ENSCAFG00845007951) #22	LTC4S (ENSCAFG00845007863) #23	MGAT4B (ENSCAFG00845007711) #24	SQSTM1 (ENSCAFG00845007599) #26	ENSCAFG00845007488 #27	TBC1D9B (ENSCAFG00845007248) #28	RNF130 (ENSCAFG00845007023) #29	RASGEF1C (ENSCAFG00845006880) #30	MAPK9 (ENSCAFG00845006710) #31	GFPT2 (ENSCAFG00845006488) #32	ENSCAFG00845006420	CNOT6 (ENSCAFG00845006394) #34	ENSCAFG00845006015 #37	ENSCAFG00845005841	ENSCAFG00845005821	ENSCAFG00845005800
Red fox	MODERN SPECIES	111	ZNF354A (ENSVVUG00000001168)	ENSVVUG00000001199	PROP1 (ENSVVUG00000001216)	ENSVVUG00000001223	ZNF354B (ENSVVUG00000001230) #8	ZFP2 (ENSVVUG00000001258) #11	ZNF454 (ENSVVUG00000001267) #12	GRM6 (ENSVVUG00000001275) #13	ZNF879 (ENSVVUG00000001298) #14	ZNF354C (ENSVVUG00000001301) #15	ADAMTS2 (ENSVVUG00000001350) #16	RUFY1 (ENSVVUG00000001379) #17	HNRNPH1 (ENSVVUG00000001397) #18	ENSVVUG00000001423 #19	CANX (ENSVVUG00000001443) #21	MAML1 (ENSVVUG00000001479) #22	LTC4S (ENSVVUG00000001534) #23	MGAT4B (ENSVVUG00000001609) #24	SQSTM1 (ENSVVUG00000001644) #26	MRNIP (ENSVVUG00000001675) #27	TBC1D9B (ENSVVUG00000001699) #28	RNF130 (ENSVVUG00000001731) #29
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000164840	ENSGT00940000162292	ENSGT00940000162330.q	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00950000183007.a.b.g.a.b.b.a
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000162292	ENSGT00940000162330.r	ENSGT00940000162330.q	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00950000183007.a.b.g.a.b.b.a
Tiger	MODERN SPECIES	179	COL23A1 (ENSPTIG00000021709)	CLK4 (ENSPTIG00000021658) #7	ZNF354A (ENSPTIG00000021645)	PROP1 (ENSPTIG00000021642)	ENSPTIG00000008066	ENSPTIG00000008063	ZNF354B (ENSPTIG00000021623) #8	ZFP2 (ENSPTIG00000008055) #11	ZNF454 (ENSPTIG00000021618) #12	GRM6 (ENSPTIG00000021610) #13	ZNF879 (ENSPTIG00000021605) #14	ADAMTS2 (ENSPTIG00000021593) #16	RUFY1 (ENSPTIG00000021574) #17	HNRNPH1 (ENSPTIG00000021552) #18	CANX (ENSPTIG00000021509) #21	MAML1 (ENSPTIG00000021443) #22	LTC4S (ENSPTIG00000021436) #23	MGAT4B (ENSPTIG00000021423) #24	SQSTM1 (ENSPTIG00000021366) #26	ENSPTIG00000021321 #27	TBC1D9B (ENSPTIG00000021280) #28	RNF130 (ENSPTIG00000021267) #29	RASGEF1C (ENSPTIG00000021261) #30	MAPK9 (ENSPTIG00000021236) #31	GFPT2 (ENSPTIG00000016814) #32	CNOT6 (ENSPTIG00000016794) #34	SCGB3A1 (ENSPTIG00000016785) #36	FLT4 (ENSPTIG00000016679) #37	ENSPTIG00000016668	ENSPTIG00000016635	TRIM52 (ENSPTIG00000016620)
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000162292	ENSGT00940000162330.r	ENSGT00940000162330.q	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT01030000236091	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00950000186148	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00950000183007.a.b.g.a.b.b.a
leopard	MODERN SPECIES	56	ZNF354A (ENSPPRG00000011698)	PROP1 (ENSPPRG00000011246)	ENSPPRG00000011161	ENSPPRG00000016090	ZNF354B (ENSPPRG00000011009) #8	ZFP2 (ENSPPRG00000016081) #11	ZNF454 (ENSPPRG00000010811) #12	GRM6 (ENSPPRG00000010413) #13	ZNF879 (ENSPPRG00000010083) #14	ZNF354C (ENSPPRG00000009858) #15	ADAMTS2 (ENSPPRG00000009123) #16	RUFY1 (ENSPPRG00000008370) #17	HNRNPH1 (ENSPPRG00000008228) #18	CBY3 (ENSPPRG00000007762) #19	CANX (ENSPPRG00000007744) #21	MAML1 (ENSPPRG00000007494) #22	LTC4S (ENSPPRG00000007076) #23	MGAT4B (ENSPPRG00000006074) #24	SQSTM1 (ENSPPRG00000005098) #26	ENSPPRG00000004317 #27	TBC1D9B (ENSPPRG00000003447) #28	RNF130 (ENSPPRG00000002048) #29	RASGEF1C (ENSPPRG00000001768) #30	MAPK9 (ENSPPRG00000018998) #31	GFPT2 (ENSPPRG00000012407) #32	CNOT6 (ENSPPRG00000011912) #34	FLT4 (ENSPPRG00000010423) #37	ENSPPRG00000015233	V1R (ENSPPRG00000015217)
lion	MODERN SPECIES		LEAP2 (ENSPLOG00000001435)	UQCRQ (ENSPLOG00000001445)	GDF9 (ENSPLOG00000001462)	SHROOM1 (ENSPLOG00000001489)	SOWAHA (ENSPLOG00000001548)	SEPTIN8 (ENSPLOG00000001577)	KIF3A (ENSPLOG00000001619)	ENSPLOG00000001651	IL13 (ENSPLOG00000001662)	ENSPLOG00000001678	RUFY1 (ENSPLOG00000001700) #17	HNRNPH1 (ENSPLOG00000001746) #18	ENSPLOG00000001782 #19	CANX (ENSPLOG00000001792) #21	ENSPLOG00000001813	MAML1 (ENSPLOG00000001822) #22	LTC4S (ENSPLOG00000001837) #23	MGAT4B (ENSPLOG00000001865) #24	SQSTM1 (ENSPLOG00000001888) #26	ENSPLOG00000001922	ENSPLOG00000001926 #27	TBC1D9B (ENSPLOG00000001968) #28	RNF130 (ENSPLOG00000002028) #29	RASGEF1C (ENSPLOG00000002080) #30	MAPK9 (ENSPLOG00000002198) #31	GFPT2 (ENSPLOG00000002417) #32	CNOT6 (ENSPLOG00000002444) #34	ENSPLOG00000002463 #36	FLT4 (ENSPLOG00000002503) #37	ENSPLOG00000002578	ENSPLOG00000002591
Cat	MODERN SPECIES		COL23A1 (ENSFCAG00000045286)	CLK4 (ENSFCAG00000030349) #7	ZNF354A (ENSFCAG00000043514)	ENSFCAG00000028668	PROP1 (ENSFCAG00000044834)	ENSFCAG00000022525	ZNF354B (ENSFCAG00000040729) #8	ZNF454 (ENSFCAG00000021971) #12	GRM6 (ENSFCAG00000009682) #13	ZNF354C (ENSFCAG00000038284) #15	ADAMTS2 (ENSFCAG00000019013) #16	RUFY1 (ENSFCAG00000001202) #17	HNRNPH1 (ENSFCAG00000001204) #18	ENSFCAG00000004846 #19	CANX (ENSFCAG00000022987) #21	MAML1 (ENSFCAG00000014693) #22	LTC4S (ENSFCAG00000019371) #23	MGAT4B (ENSFCAG00000014697) #24	SQSTM1 (ENSFCAG00000014700) #26	MRNIP (ENSFCAG00000014705) #27	TBC1D9B (ENSFCAG00000014707) #28	RASGEF1C (ENSFCAG00000004472) #30	MAPK9 (ENSFCAG00000025302) #31	GFPT2 (ENSFCAG00000004474) #32	CNOT6 (ENSFCAG00000001881) #34	SCGB3A1 (ENSFCAG00000041360) #36	FLT4 (ENSFCAG00000001882) #37	ENSFCAG00000027798	ENSFCAG00000049328	ENSFCAG00000025694	FELCATV1R2 (ENSFCAG00000031101)
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00940000162238	ENSGT00940000160245 #7	ENSGT00940000161487	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00530000063632.B
Equus	ANCESTRAL SPECIES	6	ENSGT00940000160245 #7	ENSGT00940000161487	ENSGT00940000162330.t	ENSGT00940000162292	ENSGT00940000162570 #8	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978.e #34	ENSGT00940000159358 #37	ENSGT00940000163029.b	ENSGT00530000063632.B	ENSGT00940000162750	ENSGT00940000160338
Horse	MODERN SPECIES	5	COL23A1 (ENSECAG00000041924)	CLK4 (ENSECAG00000014153) #7	ZNF354A (ENSECAG00000012431)	PROP1 (ENSECAG00000012415)	ZNF354B (ENSECAG00000012028) #8	ZFP2 (ENSECAG00000005156) #11	ZNF454 (ENSECAG00000056685) #12	GRM6 (ENSECAG00000023504) #13	ZNF879 (ENSECAG00000053026) #14	ZNF354C (ENSECAG00000023446) #15	ADAMTS2 (ENSECAG00000016328) #16	RUFY1 (ENSECAG00000023719) #17	HNRNPH1 (ENSECAG00000014429) #18	CBY3 (ENSECAG00000056430) #19	CANX (ENSECAG00000003079) #21	MAML1 (ENSECAG00000024706) #22	LTC4S (ENSECAG00000020644) #23	MGAT4B (ENSECAG00000010844) #24	SQSTM1 (ENSECAG00000020929) #26	MRNIP (ENSECAG00000020524) #27	TBC1D9B (ENSECAG00000017830) #28	RNF130 (ENSECAG00000007222) #29	RASGEF1C (ENSECAG00000015254) #30	ENSECAG00000059110	MAPK9 (ENSECAG00000021489) #31	GFPT2 (ENSECAG00000009303) #32	CNOT6 (ENSECAG00000019325) #34	FLT4 (ENSECAG00000017108) #37	ENSECAG00000047525	ENSECAG00000045902	ENSECAG00000046956
Donkey	MODERN SPECIES	29	ZNF354A (ENSEASG00005030309)	ENSEASG00005007169	ENSEASG00005007167	ZNF354B (ENSEASG00005037407) #8	ZFP2 (ENSEASG00005012614) #11	ZNF454 (ENSEASG00005012616) #12	GRM6 (ENSEASG00005012619) #13	ZNF879 (ENSEASG00005026494) #14	ZNF354C (ENSEASG00005012627) #15	ADAMTS2 (ENSEASG00005012630) #16	RUFY1 (ENSEASG00005012637) #17	ENSEASG00005031517	HNRNPH1 (ENSEASG00005012642) #18	CBY3 (ENSEASG00005012647) #19	CANX (ENSEASG00005012649) #21	MAML1 (ENSEASG00005012652) #22	ENSEASG00005012654 #23	MGAT4B (ENSEASG00005012655) #24	SQSTM1 (ENSEASG00005012658) #26	ENSEASG00005012662 #27	TBC1D9B (ENSEASG00005028853) #28	RNF130 (ENSEASG00005012726) #29	RASGEF1C (ENSEASG00005012753) #30	MAPK9 (ENSEASG00005012786) #31	GFPT2 (ENSEASG00005012790) #32	ENSEASG00005012794 #34	FLT4 (ENSEASG00005012804) #37	ENSEASG00005012833	MGAT1 (ENSEASG00005035153)	ZFP62 (ENSEASG00005012840)	BTNL9 (ENSEASG00005031036)
Chiroptera	ANCESTRAL SPECIES	1				ENSGT00940000162570 #8	ENSGT00940000162851	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00530000063632.B
Microchiroptera	ANCESTRAL SPECIES	3					ENSGT00940000162851	ENSGT00940000162743 #11	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000178333	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00530000063632.B
Microbat	MODERN SPECIES	1353													RUFY1 (ENSMLUG00000016610) #17	ENSMLUG00000016625 #18	CANX (ENSMLUG00000013027) #21	MAML1 (ENSMLUG00000008087) #22	ENSMLUG00000030145 #23	MGAT4B (ENSMLUG00000006819) #24	SQSTM1 (ENSMLUG00000001250) #26	ENSMLUG00000001257 #27	RNF130 (ENSMLUG00000023943) #29	MAPK9 (ENSMLUG00000005924) #31	GFPT2 (ENSMLUG00000013606) #32	CNOT6 (ENSMLUG00000010257) #34
Greater horseshoe bat	MODERN SPECIES	16	ENSRFEG00010020667	ZFP2 (ENSRFEG00010020696) #11	ZNF454 (ENSRFEG00010020708) #12	GRM6 (ENSRFEG00010020725) #13	ZNF879 (ENSRFEG00010020752) #14	ZNF354C (ENSRFEG00010020767) #15	ADAMTS2 (ENSRFEG00010020822) #16	ENSRFEG00010020942	ENSRFEG00010020957	RUFY1 (ENSRFEG00010020977) #17	HNRNPH1 (ENSRFEG00010021042) #18	ENSRFEG00010021085	ENSRFEG00010021101	ENSRFEG00010021107 #19	CANX (ENSRFEG00010021119) #21	MAML1 (ENSRFEG00010021142) #22	LTC4S (ENSRFEG00010021169) #23	MGAT4B (ENSRFEG00010021202) #24	SQSTM1 (ENSRFEG00010021248) #26	ENSRFEG00010021266 #27	TBC1D9B (ENSRFEG00010021286) #28	ENSRFEG00010021331	RNF130 (ENSRFEG00010021349) #29	RASGEF1C (ENSRFEG00010021365) #30	MAPK9 (ENSRFEG00010021397) #31	GFPT2 (ENSRFEG00010021436) #32	ENSRFEG00010021453	CNOT6 (ENSRFEG00010021460) #34	SCGB3A1 (ENSRFEG00010021477) #36	FLT4 (ENSRFEG00010021493) #37	ENSRFEG00010021535
Megabat	MODERN SPECIES	389															CANX (ENSPVAG00000015489) #21	MAML1 (ENSPVAG00000015490) #22	ENSPVAG00000015492	MGAT4B (ENSPVAG00000015497) #24	SQSTM1 (ENSPVAG00000015501) #26	MRNIP (ENSPVAG00000015503) #27	TBC1D9B (ENSPVAG00000015506) #28	RNF130 (ENSPVAG00000015510) #29
Atlantogenata	ANCESTRAL SPECIES		ENSGT01090000260018.A.a.b	ENSGT01090000259995.b.a.a.b	ENSGT00940000160338	ENSGT00940000163611	ENSGT00940000162750	ENSGT00530000063632.B	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37	ENSGT00940000163029	ENSGT00940000162292	ENSGT00940000162330
Afrotheria	ANCESTRAL SPECIES	123	ENSGT01090000260018.D.d.a	ENSGT01090000260018.A.a.b	ENSGT01090000259995.b.a.a.b	ENSGT00940000160338	ENSGT00940000162750	ENSGT00530000063632.B	ENSGT00940000162181 #12	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Afrotheria_a	ANCESTRAL SPECIES	127	ENSGT01090000260018.D.d.b	ENSGT01090000260018.D.d.a	ENSGT01090000260018.A.a.b	ENSGT01090000259995.b.a.a.b	ENSGT00940000160338	ENSGT00940000162750	ENSGT00530000063632.B	ENSGT01030000234648.a.b.a.b #13	ENSGT00940000162816 #14	ENSGT00940000162715 #15	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.a.a.a #18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00420000029848.A #36	ENSGT00940000159358 #37
Elephant	MODERN SPECIES	2	ENSLAFG00000030931	ENSLAFG00000028643	ENSLAFG00000029553	ENSLAFG00000028767	BTNL9 (ENSLAFG00000010886)	ZFP62 (ENSLAFG00000010486)	MGAT1 (ENSLAFG00000009734)	GRM6 (ENSLAFG00000022818) #13	ZNF879 (ENSLAFG00000018662) #14	ZNF354C (ENSLAFG00000006476) #15	ADAMTS2 (ENSLAFG00000006120) #16	RUFY1 (ENSLAFG00000015754) #17	ENSLAFG00000015766 #18	ENSLAFG00000001132 #19	CANX (ENSLAFG00000000512) #21	MAML1 (ENSLAFG00000000515) #22	LTC4S (ENSLAFG00000020490) #23	ENSLAFG00000017123 #24	MGAT4B (ENSLAFG00000030911) #24	SQSTM1 (ENSLAFG00000028515) #26	MRNIP (ENSLAFG00000028457) #27	TBC1D9B (ENSLAFG00000018254) #28	RNF130 (ENSLAFG00000008735) #29	RASGEF1C (ENSLAFG00000002749) #30	MAPK9 (ENSLAFG00000014532) #31	GFPT2 (ENSLAFG00000007391) #32	CNOT6 (ENSLAFG00000016742) #34	ENSLAFG00000009953 #36	FLT4 (ENSLAFG00000008776) #37	ENSLAFG00000031837	ENSLAFG00000031942
Hyrax	MODERN SPECIES	2005															CANX (ENSPCAG00000004473) #21	MAML1 (ENSPCAG00000004553) #22
Tenrec	MODERN SPECIES	16434															CANX (ENSETEG00000010509) #21	MAML1 (ENSETEG00000010506) #22
Xenarthra	ANCESTRAL SPECIES	1090														ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24
Armadillo	MODERN SPECIES	2373														CBY3 (ENSDNOG00000032017) #19	CANX (ENSDNOG00000009892) #21	MAML1 (ENSDNOG00000009919) #22	LTC4S (ENSDNOG00000037622) #23	MGAT4B (ENSDNOG00000037025) #24
Marsupialia	ANCESTRAL SPECIES	9	ENSGT00940000155266.x	ENSGT00940000154663	ENSGT00390000000546	ENSGT00390000001562	ENSGT00940000159472	ENSGT00950000183131.a	ENSGT00940000162922	ENSGT00390000013020	ENSGT00950000183176.a	ENSGT00950000182863.A.a.b	ENSGT00940000158764	ENSGT00940000155448	ENSGT00940000159708	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00940000158554 #28	ENSGT00940000157465.a #29	ENSGT00940000159358 #37	ENSGT00420000029848.A #36	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000161005 #30	ENSGT00940000160245 #7	ENSGT00940000162238	ENSGT00940000159222	ENSGT00940000154735
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000157601	ENSGT00940000154663	ENSGT00940000155266.x	ENSGT00390000000546	ENSGT00390000001562	ENSGT00940000159472	ENSGT00950000183131.a	ENSGT00940000162922	ENSGT00950000183176.a	ENSGT00950000182863.A.a.b	ENSGT00940000158764	ENSGT00940000155448	ENSGT00940000159708	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00940000158554 #28	ENSGT00940000157465.a #29	ENSGT00940000159358 #37	ENSGT00420000029848.A #36	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000161005 #30	ENSGT00940000160245 #7	ENSGT00940000162238	ENSGT00940000159222	ENSGT00940000154735
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00390000001804	ENSGT00940000157601.x.a	ENSGT00940000155266.x	ENSGT00390000000546	ENSGT00390000001562	ENSGT00940000159472	ENSGT00950000183131.a	ENSGT00940000162922	ENSGT00950000183176.a	ENSGT00950000182863.A.a.b	ENSGT00940000158764	ENSGT00940000155448	ENSGT00940000159708	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00940000158554 #28	ENSGT00940000157465.a #29	ENSGT00940000159358 #37	ENSGT00420000029848.A #36	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000161005 #30	ENSGT00940000160245 #7	ENSGT00940000162238	ENSGT00940000159222	ENSGT00940000154735
Wallaby	MODERN SPECIES	6536																MAML1 (ENSMEUG00000005948) #22	LTC4S (ENSMEUG00000005965) #23	MGAT4B (ENSMEUG00000005974) #24
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000157601.x.b	ENSGT00940000154663	ENSGT00940000155266.x	ENSGT00390000000546	ENSGT00390000001562	ENSGT00940000159472	ENSGT00950000183131.a	ENSGT00940000162922	ENSGT00950000183176.a	ENSGT00950000182863.A.a.b	ENSGT00940000158764	ENSGT00940000155448	ENSGT00940000159708	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738 #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00940000158554 #28	ENSGT00940000157465.a #29	ENSGT00940000159358 #37	ENSGT00420000029848.A #36	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000161005 #30	ENSGT00940000160245 #7	ENSGT00940000162238	ENSGT00940000159222	ENSGT00940000154735
Common wonbat	MODERN SPECIES	1023	EIF2S2 (ENSVURG00010019246)	ENSVURG00010019251	CHMP4B (ENSVURG00010019263)	ENSVURG00010019269	ZNF341 (ENSVURG00010019277)	PXMP4 (ENSVURG00010019297)	E2F1 (ENSVURG00010019304)	NECAB3 (ENSVURG00010019324)	ACTL10 (ENSVURG00010019341)	CBFA2T2 (ENSVURG00010019347)	SNTA1 (ENSVURG00010019377)	TOX2 (ENSVURG00010019590)	SRSF6 (ENSVURG00010019601)	L3MBTL1 (ENSVURG00010019617)	CANX (ENSVURG00010019632) #21	MAML1 (ENSVURG00010019659) #22	SQSTM1 (ENSVURG00010019670) #26	TBC1D9B (ENSVURG00010019683) #28	RNF130 (ENSVURG00010019705) #29	FLT4 (ENSVURG00010019743) #37	ENSVURG00010019769 #36	MAPK9 (ENSVURG00010019784) #31	GFPT2 (ENSVURG00010019801) #32	CNOT6 (ENSVURG00010019814) #34	RASGEF1C (ENSVURG00010019833) #30	CLK4 (ENSVURG00010019863) #7	ENSVURG00010019893	PHYKPL (ENSVURG00010019924)	HNRNPAB (ENSVURG00010000096)	NHP2 (ENSVURG00010000133)	ENSVURG00010000153
koala	MODERN SPECIES	74	ENSPCIG00000011153	CHMP4B (ENSPCIG00000005848)	ENSPCIG00000005849	ZNF341 (ENSPCIG00000005844)	PXMP4 (ENSPCIG00000005843)	E2F1 (ENSPCIG00000005835)	NECAB3 (ENSPCIG00000005831)	ENSPCIG00000005833	ENSPCIG00000005830	SNTA1 (ENSPCIG00000005829)	TOX2 (ENSPCIG00000005825)	SRSF6 (ENSPCIG00000003820)	L3MBTL1 (ENSPCIG00000003824)	ENSPCIG00000033556 #19	CANX (ENSPCIG00000003888) #21	MAML1 (ENSPCIG00000003902) #22	ENSPCIG00000003908 #23	MGAT4B (ENSPCIG00000003915) #24	SQSTM1 (ENSPCIG00000003936) #26	TBC1D9B (ENSPCIG00000003952) #28	ENSPCIG00000003992 #29	FLT4 (ENSPCIG00000004027) #37	ENSPCIG00000004056 #36	MAPK9 (ENSPCIG00000004062) #31	GFPT2 (ENSPCIG00000004080) #32	CNOT6 (ENSPCIG00000020319) #34	RASGEF1C (ENSPCIG00000018198) #30	CLK4 (ENSPCIG00000018201) #7	COL23A1 (ENSPCIG00000037047)	PHYKPL (ENSPCIG00000002747)	HNRNPAB (ENSPCIG00000002735)
Tasmanian devil	MODERN SPECIES	1	EIF2S2 (ENSSHAG00000029026)	ENSSHAG00000022710	ENSSHAG00000026098	ENSSHAG00000022664	ZNF341 (ENSSHAG00000022447)	PXMP4 (ENSSHAG00000029249)	ENSSHAG00000023415	E2F1 (ENSSHAG00000029215)	ENSSHAG00000023391	ENSSHAG00000024966	ENSSHAG00000015173	ENSSHAG00000013874	ENSSHAG00000012805	ENSSHAG00000028809	ENSSHAG00000011510 #21	MAML1 (ENSSHAG00000011151) #22	LTC4S (ENSSHAG00000025649) #23	MGAT4B (ENSSHAG00000010968) #24	SQSTM1 (ENSSHAG00000025384) #26	ENSSHAG00000009809 #28	ENSSHAG00000008447 #29	ENSSHAG00000007344 #37	ENSSHAG00000006299 #36	MAPK9 (ENSSHAG00000005542) #31	ENSSHAG00000004019 #32	ENSSHAG00000017436 #34	ENSSHAG00000016960 #7	COL23A1 (ENSSHAG00000015949)	PHYKPL (ENSSHAG00000015838)	ENSSHAG00000015802	NHP2 (ENSSHAG00000015581)
Opossum	MODERN SPECIES		CHMP4B (ENSMODG00000002830)	ZNF341 (ENSMODG00000002856)	PXMP4 (ENSMODG00000002864)	E2F1 (ENSMODG00000002875)	ENSMODG00000002988	ENSMODG00000002993	NECAB3 (ENSMODG00000002977)	CBFA2T2 (ENSMODG00000003023)	SNTA1 (ENSMODG00000003050)	TOX2 (ENSMODG00000003070)	ENSMODG00000023076	SRSF6 (ENSMODG00000003107)	L3MBTL1 (ENSMODG00000003647)	ENSMODG00000003673 #19	ENSMODG00000003708 #21	MAML1 (ENSMODG00000003725) #22	LTC4S (ENSMODG00000003733) #23	MGAT4B (ENSMODG00000003778) #24	SQSTM1 (ENSMODG00000003806) #26	TBC1D9B (ENSMODG00000003882) #28	ENSMODG00000003904 #29	FLT4 (ENSMODG00000003918) #37	ENSMODG00000003922 #36	MAPK9 (ENSMODG00000003946) #31	GFPT2 (ENSMODG00000003969) #32	CNOT6 (ENSMODG00000003979) #34	RASGEF1C (ENSMODG00000004052) #30	CLK4 (ENSMODG00000004119) #7	COL23A1 (ENSMODG00000004172)	HNRNPAB (ENSMODG00000004217)	NHP2 (ENSMODG00000004231)
Platypus	MODERN SPECIES	85	RMND5B (ENSOANG00000043497)	NHP2 (ENSOANG00000001204)	HNRNPAB (ENSOANG00000004998)	PHYKPL (ENSOANG00000004999)	COL23A1 (ENSOANG00000005000)	CLK4 (ENSOANG00000010230) #7	RASGEF1C (ENSOANG00000010229) #30	MAPK9 (ENSOANG00000010228) #31	GFPT2 (ENSOANG00000010227) #32	CNOT6 (ENSOANG00000010226) #34	ADAMTS2 (ENSOANG00000010225) #16	ENSOANG00000010223 #17	ENSOANG00000010222 ##18	ENSOANG00000010221 #19	CANX (ENSOANG00000013590) #21	MAML1 (ENSOANG00000013589) #22	LTC4S (ENSOANG00000045177) #23	MGAT4B (ENSOANG00000013588) #24	SQSTM1 (ENSOANG00000014851) #26	ENSOANG00000039463 #27	ENSOANG00000036131	ALAS1 (ENSOANG00000014853)	POC1A (ENSOANG00000014854)	DUSP7 (ENSOANG00000048154)	ACY1 (ENSOANG00000001327)	ABHD14A (ENSOANG00000037506)	ABHD14B (ENSOANG00000037228)	TEX264 (ENSOANG00000040502)	RAD54L2 (ENSOANG00000012793)	DCAF1 (ENSOANG00000012792)	ENSOANG00000001071
Sauria	ANCESTRAL SPECIES	17	ENSGT00940000159308	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00990000206303	ENSGT00390000017909	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000153137.a.b.a #19	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.h #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b
Archelosauria	ANCESTRAL SPECIES	15	ENSGT00940000159308	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00990000206303	ENSGT00390000017909	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000153137.a.b.a #19	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000155150.b.b
Archosauria	ANCESTRAL SPECIES	17	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00990000206303	ENSGT00390000017909	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000153137.a.b.a #19	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000155150.b.b
Aves	ANCESTRAL SPECIES	15	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000153137.a.b.a #19	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000155150.b.b
Neognathae	ANCESTRAL SPECIES	14	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00390000017909	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000155150.b.b
Neognathae_b	ANCESTRAL SPECIES	16	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00390000017909	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000155150.b.b
Neognathae_c	ANCESTRAL SPECIES	19	ENSGT00940000157840	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000155150.b.b
Golden eagle	MODERN SPECIES	14	WNT8A (ENSACCG00020015786)	NME5 (ENSACCG00020015776)	HNRNPAB (ENSACCG00020015761)	PHYKPL (ENSACCG00020015749)	CLK4 (ENSACCG00020015732) #7	RASGEF1C (ENSACCG00020015714) #30	MAPK9 (ENSACCG00020015665) #31	GFPT2 (ENSACCG00020015570) #32	CNOT6 (ENSACCG00020015512) #34	ADAMTS2 (ENSACCG00020015422) #16	RUFY1 (ENSACCG00020015254) #17	ENSACCG00020015222	ENSACCG00020015174 ##18	ENSACCG00020015121 #23	CANX (ENSACCG00020015110) #21	MAML1 (ENSACCG00020015085) #22	ENSACCG00020015072 #23	MGAT4B (ENSACCG00020015055) #24	SQSTM1 (ENSACCG00020015027) #26	TBC1D9B (ENSACCG00020014941) #28	RNF130 (ENSACCG00020014886) #29	FLT4 (ENSACCG00020014606) #37	ENSACCG00020014402	ENSACCG00020014389	HMGXB3 (ENSACCG00020014338)	CSF1R (ENSACCG00020014270)	PDGFRB (ENSACCG00020014132)	ENSACCG00020014034	SLC6A7 (ENSACCG00020014014)	ENSACCG00020013979	ARSI (ENSACCG00020013936)
Kakapo	MODERN SPECIES	6	WNT8A (ENSSHBG00005008010)	NME5 (ENSSHBG00005008026)	HNRNPAB (ENSSHBG00005008039)	PHYKPL (ENSSHBG00005008050)	CLK4 (ENSSHBG00005008068) #7	RASGEF1C (ENSSHBG00005008091) #30	MAPK9 (ENSSHBG00005008107) #31	GFPT2 (ENSSHBG00005008139) #32	CNOT6 (ENSSHBG00005008176) #34	ADAMTS2 (ENSSHBG00005008223) #16	RUFY1 (ENSSHBG00005008332) #17	ENSSHBG00005008360 ##18	ENSSHBG00005008382	ENSSHBG00005008385 #23	CANX (ENSSHBG00005008393) #21	MAML1 (ENSSHBG00005008399) #22	ENSSHBG00005008408 #23	MGAT4B (ENSSHBG00005008420) #24	SQSTM1 (ENSSHBG00005008441) #26	ENSSHBG00005008459 #27	TBC1D9B (ENSSHBG00005008481) #28	RNF130 (ENSSHBG00005008494) #29	FLT4 (ENSSHBG00005008539) #37	ENSSHBG00005008652	ENSSHBG00005000759	ENSSHBG00005005364	HMGXB3 (ENSSHBG00005005462)	CSF1R (ENSSHBG00005005702)	ENSSHBG00005005995	ENSSHBG00005006031	ENSSHBG00005006039
Passeriformes	ANCESTRAL SPECIES	14	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00390000017909	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b
Great tit	MODERN SPECIES	4	NME5 (ENSPMJG00000008733)	PHYKPL (ENSPMJG00000008732)	HNRNPAB (ENSPMJG00000008731)	CLK4 (ENSPMJG00000008727) #7	RASGEF1C (ENSPMJG00000008725) #30	MAPK9 (ENSPMJG00000008720) #31	GFPT2 (ENSPMJG00000008717) #32	CNOT6 (ENSPMJG00000008709) #34	ENSPMJG00000008708	ADAMTS2 (ENSPMJG00000008215) #16	RUFY1 (ENSPMJG00000008200) #17	ENSPMJG00000008198 ##18	ENSPMJG00000008197	ENSPMJG00000008196 #23	CANX (ENSPMJG00000008194) #21	MAML1 (ENSPMJG00000008193) #22	ENSPMJG00000008192 #23	MGAT4B (ENSPMJG00000008191) #24	SQSTM1 (ENSPMJG00000008190) #26	ENSPMJG00000008189 #27	TBC1D9B (ENSPMJG00000008188) #28	RNF130 (ENSPMJG00000008163) #29	FLT4 (ENSPMJG00000008144) #37	ENSPMJG00000008142	ENSPMJG00000008140	HMGXB3 (ENSPMJG00000008137)	CSF1R (ENSPMJG00000008134)	PDGFRB (ENSPMJG00000008128)	ENSPMJG00000008125	SLC6A7 (ENSPMJG00000008124)	ENSPMJG00000008123
Passeriformes_d	ANCESTRAL SPECIES	15	ENSGT00940000157840	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000155150.b.b
Flycatcher	MODERN SPECIES	4	NME5 (ENSFALG00000007651)	PHYKPL (ENSFALG00000007658)	ENSFALG00000007654	ENSFALG00000007671	ENSFALG00000007682 #7	RASGEF1C (ENSFALG00000007687) #30	MAPK9 (ENSFALG00000007690) #31	GFPT2 (ENSFALG00000007695) #32	CNOT6 (ENSFALG00000029051) #34	ADAMTS2 (ENSFALG00000007706) #16	RUFY1 (ENSFALG00000007724) #17	ENSFALG00000007747 ##18	ENSFALG00000007761	ENSFALG00000007764 #23	CANX (ENSFALG00000007769) #21	MAML1 (ENSFALG00000025517) #22	ENSFALG00000007777 #23	MGAT4B (ENSFALG00000007786) #24	SQSTM1 (ENSFALG00000023497) #26	ENSFALG00000028425 #27	TBC1D9B (ENSFALG00000007812) #28	RNF130 (ENSFALG00000007816) #29	ENSFALG00000007835 #37	ENSFALG00000007870	ENSFALG00000014366	HMGXB3 (ENSFALG00000007879)	CSF1R (ENSFALG00000007905)	PDGFRB (ENSFALG00000007939)	ENSFALG00000007944	SLC6A7 (ENSFALG00000007961)	ENSFALG00000007989
Passeriformes_g	ANCESTRAL SPECIES	15	ENSGT00940000157840	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000155150.b.b
Medium ground finch	MODERN SPECIES	11	WNT8A (ENSGFOG00000003821)	NME5 (ENSGFOG00000003839)	HNRNPAB (ENSGFOG00000003855)	PHYKPL (ENSGFOG00000003891)	CLK4 (ENSGFOG00000003915) #7	RASGEF1C (ENSGFOG00000003937) #30	MAPK9 (ENSGFOG00000003958) #31	GFPT2 (ENSGFOG00000003990) #32	CNOT6 (ENSGFOG00000004035) #34	ADAMTS2 (ENSGFOG00000004096) #16	RUFY1 (ENSGFOG00000005270) #17	ENSGFOG00000005296 ##18	ENSGFOG00000005339	ENSGFOG00000005388 #23	CANX (ENSGFOG00000000010) #21	MAML1 (ENSGFOG00000000012) #22	ENSGFOG00000000013 #23	MGAT4B (ENSGFOG00000000014) #24	SQSTM1 (ENSGFOG00000000015) #26	ENSGFOG00000000016	TBC1D9B (ENSGFOG00000000023) #28	RNF130 (ENSGFOG00000000027) #29	FLT4 (ENSGFOG00000000045) #37	ENSGFOG00000000100	ENSGFOG00000000101	HMGXB3 (ENSGFOG00000000106)	CSF1R (ENSGFOG00000000114)	PDGFRB (ENSGFOG00000000122)	ENSGFOG00000000127	SLC6A7 (ENSGFOG00000000134)	ENSGFOG00000000162
Passeroidea	ANCESTRAL SPECIES	15	ENSGT00940000157840	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000155150.b.b
Zebra finch	MODERN SPECIES	4	WNT8A (ENSTGUG00000001171)	NME5 (ENSTGUG00000001170)	HNRNPAB (ENSTGUG00000028392)	PHYKPL (ENSTGUG00000001162)	CLK4 (ENSTGUG00000001155) #7	RASGEF1C (ENSTGUG00000001150) #30	MAPK9 (ENSTGUG00000023050) #31	GFPT2 (ENSTGUG00000001128) #32	CNOT6 (ENSTGUG00000001119) #34	ADAMTS2 (ENSTGUG00000001108) #16	RUFY1 (ENSTGUG00000001097) #17	ENSTGUG00000001085 ##18	ENSTGUG00000001082	ENSTGUG00000001074 #23	CANX (ENSTGUG00000001054) #21	MAML1 (ENSTGUG00000001049) #22	ENSTGUG00000001044 #23	MGAT4B (ENSTGUG00000001033) #24	SQSTM1 (ENSTGUG00000001022) #26	ENSTGUG00000021129 #27	TBC1D9B (ENSTGUG00000001013) #28	RNF130 (ENSTGUG00000001009) #29	FLT4 (ENSTGUG00000000983) #37	ENSTGUG00000027380	ENSTGUG00000000982	HMGXB3 (ENSTGUG00000000975)	CSF1R (ENSTGUG00000000965)	PDGFRB (ENSTGUG00000000942)	ENSTGUG00000000941	SLC6A7 (ENSTGUG00000000917)	CAMK2A (ENSTGUG00000000887)
Common canary	MODERN SPECIES	16	WNT8A (ENSSCAG00000011117)	NME5 (ENSSCAG00000011123)	HNRNPAB (ENSSCAG00000011128)	PHYKPL (ENSSCAG00000011133)	CLK4 (ENSSCAG00000011140) #7	RASGEF1C (ENSSCAG00000011146) #30	MAPK9 (ENSSCAG00000011152) #31	GFPT2 (ENSSCAG00000011157) #32	CNOT6 (ENSSCAG00000011162) #34	ADAMTS2 (ENSSCAG00000011211) #16	RUFY1 (ENSSCAG00000011477) #17	ENSSCAG00000011489 ##18	ENSSCAG00000011506	ENSSCAG00000011513 #23	CANX (ENSSCAG00000011524) #21	MAML1 (ENSSCAG00000011526) #22	ENSSCAG00000011528 #23	MGAT4B (ENSSCAG00000011538) #24	SQSTM1 (ENSSCAG00000011545) #26	ENSSCAG00000011551 #27	TBC1D9B (ENSSCAG00000011597) #28	RNF130 (ENSSCAG00000011779) #29	FLT4 (ENSSCAG00000011785) #37	ENSSCAG00000011795	ENSSCAG00000011798	HMGXB3 (ENSSCAG00000011802)	CSF1R (ENSSCAG00000011805)	PDGFRB (ENSSCAG00000011809)	ENSSCAG00000011822	SLC6A7 (ENSSCAG00000011824)	ENSSCAG00000011830
Galloanserae	ANCESTRAL SPECIES	14	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000163514.C	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00390000017909	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000155150.b.b
Anatidae	ANCESTRAL SPECIES	15	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000163514.C	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00390000017909	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358.c #37	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b	ENSGT00940000157656.a
Pink-footed goose	MODERN SPECIES	9	WNT8A (ENSABRG00000003621)	NME5 (ENSABRG00000003571)	HNRNPAB (ENSABRG00000003559)	PHYKPL (ENSABRG00000003395)	CLK4 (ENSABRG00000003361) #7	RASGEF1C (ENSABRG00000003330) #30	MAPK9 (ENSABRG00000003268) #31	GFPT2 (ENSABRG00000003156) #32	CNOT6 (ENSABRG00000002765) #34	ADAMTS2 (ENSABRG00000002027) #16	RUFY1 (ENSABRG00000001121) #17	ENSABRG00000000385 ##18	ENSABRG00000018456	ENSABRG00000018451 #23	CANX (ENSABRG00000018390) #21	MAML1 (ENSABRG00000018368) #22	ENSABRG00000018364 #23	MGAT4B (ENSABRG00000018285) #24	SQSTM1 (ENSABRG00000018209) #26	ENSABRG00000018206 #27	TBC1D9B (ENSABRG00000017814) #28	RNF130 (ENSABRG00000017775) #29	FLT4 (ENSABRG00000017535) #37	ENSABRG00000017496	HMGXB3 (ENSABRG00000017493)	CSF1R (ENSABRG00000017483)	PDGFRB (ENSABRG00000017474)	ENSABRG00000017472	SLC6A7 (ENSABRG00000017465)	ENSABRG00000017460	ARSI (ENSABRG00000017457)
Duck	MODERN SPECIES	5	NME5 (ENSAPLG00000013940)	PHYKPL (ENSAPLG00000014272)	HNRNPAB (ENSAPLG00000014040)	ENSAPLG00000014525	CLK4 (ENSAPLG00000014787) #7	RASGEF1C (ENSAPLG00000015248) #30	MAPK9 (ENSAPLG00000013460) #31	GFPT2 (ENSAPLG00000012941) #32	CNOT6 (ENSAPLG00000012715) #34	ENSAPLG00000001038	ADAMTS2 (ENSAPLG00000012527) #16	RUFY1 (ENSAPLG00000010790) #17	ENSAPLG00000010309 ##18	ENSAPLG00000029808	ENSAPLG00000018622 #23	MAML1 (ENSAPLG00000009517) #22	ENSAPLG00000009497 #23	MGAT4B (ENSAPLG00000008886) #24	CANX (ENSAPLG00000009588) #21	MRNIP (ENSAPLG00000008639) #27	ENSAPLG00000016862	TBC1D9B (ENSAPLG00000008106) #28	ENSAPLG00000007868 #37	RNF130 (ENSAPLG00000007959) #29	FLT4 (ENSAPLG00000005955) #37	ENSAPLG00000011578	ENSAPLG00000018926	ENSAPLG00000021315	ENSAPLG00000005491	CSF1R (ENSAPLG00000013023)	PDGFRB (ENSAPLG00000013101)
Phasianidae	ANCESTRAL SPECIES	14	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000163514.C.dc	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413.c #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000155150.b.b
Japanese quail	MODERN SPECIES	4	WNT8A (ENSCJPG00005005215)	NME5 (ENSCJPG00005005216)	HNRNPAB (ENSCJPG00005005218)	PHYKPL (ENSCJPG00005005220)	CLK4 (ENSCJPG00005005226) #7	RASGEF1C (ENSCJPG00005005236) #30	MAPK9 (ENSCJPG00005005246) #31	GFPT2 (ENSCJPG00005005253) #32	CNOT6 (ENSCJPG00005005257) #34	ADAMTS2 (ENSCJPG00005005259) #16	RUFY1 (ENSCJPG00005005260) #17	ENSCJPG00005005262 ##18	ENSCJPG00005005263	ENSCJPG00005005264 #23	CANX (ENSCJPG00005005265) #21	MAML1 (ENSCJPG00005005266) #22	ENSCJPG00005005267 #23	MGAT4B (ENSCJPG00005005272) #24	SQSTM1 (ENSCJPG00005005275) #26	ENSCJPG00005005466 #27	TBC1D9B (ENSCJPG00005005467) #28	RNF130 (ENSCJPG00005005476) #29	FLT4 (ENSCJPG00005005537) #37	ENSCJPG00005005646	ENSCJPG00005005647	HMGXB3 (ENSCJPG00005005648)	CSF1R (ENSCJPG00005005658)	PDGFRB (ENSCJPG00005005661)	ENSCJPG00005005664	SLC6A7 (ENSCJPG00005005672)	CAMK2A (ENSCJPG00005006530)
Phasianidae_b	ANCESTRAL SPECIES	18	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000163514.C.dc	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413.c #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000164917	ENSGT00940000153503.b ##18	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.g.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b
Turkey	MODERN SPECIES	6	ENSMGAG00000020896	ENSMGAG00000006543	ENSMGAG00000006665	ENSMGAG00000006839	SLC6A7 (ENSMGAG00000006793)	ENSMGAG00000006864	ENSMGAG00000006856	ENSMGAG00000006974	ENSMGAG00000015454	ENSMGAG00000020278	ENSMGAG00000006995 #37	ENSMGAG00000007091 #29	ENSMGAG00000007111 #28	SQSTM1 (ENSMGAG00000007163) #26	ENSMGAG00000019623	MAML1 (ENSMGAG00000015455) #22	ENSMGAG00000007235 #23	MGAT4B (ENSMGAG00000007181) #24	ENSMGAG00000007250 #21	ENSMGAG00000007364 #23	ENSMGAG00000007380	ENSMGAG00000007328 ##18	ENSMGAG00000016936 #17	ENSMGAG00000017243 #16	ENSMGAG00000007477 #16	ENSMGAG00000007499 #34	ENSMGAG00000019477 #32	ENSMGAG00000007504 #32	ENSMGAG00000007540 #31	ENSMGAG00000007606 #7	ENSMGAG00000007555 #30
Chicken	MODERN SPECIES	4	NME5 (ENSGALG00010015198)	PHYKPL (ENSGALG00010015182)	HNRNPAB (ENSGALG00010015142)	ENSGALG00010015122	CLK4 (ENSGALG00010012880) #7	RASGEF1C (ENSGALG00010015260) #30	MAPK9 (ENSGALG00010015175) #31	GFPT2 (ENSGALG00010015161) #32	CNOT6 (ENSGALG00010015156) #34	ADAMTS2 (ENSGALG00010015111) #16	RUFY1 (ENSGALG00010015066) #17	DCK2 (ENSGALG00010015049)	HNRNPH1 (ENSGALG00010014967) ##18	LTC4SL (ENSGALG00010016985) #23	CANX (ENSGALG00010016947) #21	MAML1 (ENSGALG00010016964) #22	LTC4S (ENSGALG00010016951) #23	MGAT4B (ENSGALG00010016927) #24	SQSTM1 (ENSGALG00010016907) #26	ENSGALG00010016902 #27	TBC1D9B (ENSGALG00010016893) #28	RNF130 (ENSGALG00010016879) #29	FLT4 (ENSGALG00010016867) #37	ENSGALG00010016848	NPY7R (ENSGALG00010016842)	HMGXB3 (ENSGALG00010016814)	CSF1R (ENSGALG00010016804)	PDGFRB (ENSGALG00010016785)	CDX1 (ENSGALG00010013660)	SLC6A7 (ENSGALG00010013654)	CAMK2A (ENSGALG00010013576)
African ostrich	MODERN SPECIES	151					RASGEF1C (ENSSCUG00000003111) #30	MAPK9 (ENSSCUG00000003101) #31	GFPT2 (ENSSCUG00000003064) #32	CNOT6 (ENSSCUG00000003037) #34	ADAMTS2 (ENSSCUG00000003011) #16	RUFY1 (ENSSCUG00000002990) #17	ENSSCUG00000002988 ##18	ENSSCUG00000002987	ENSSCUG00000002986 #19	ENSSCUG00000002985 #23	CANX (ENSSCUG00000002981) #21	MAML1 (ENSSCUG00000002977) #22	ENSSCUG00000002973 #23	MGAT4B (ENSSCUG00000002969) #24	SQSTM1 (ENSSCUG00000002963) #26	TBC1D9B (ENSSCUG00000002940) #28	RNF130 (ENSSCUG00000002936) #29	FLT4 (ENSSCUG00000002935) #37	ENSSCUG00000002934	ENSSCUG00000002932	HMGXB3 (ENSSCUG00000002931)	CSF1R (ENSSCUG00000002929)	PDGFRB (ENSSCUG00000002926)	CDX1 (ENSSCUG00000002924)	SLC6A7 (ENSSCUG00000002922)	ENSSCUG00000002920	ENSSCUG00000002919
Australian saltwater crocodile	MODERN SPECIES	34	ENSCPRG00005011444	CLK4 (ENSCPRG00005011465) #7	RASGEF1C (ENSCPRG00005011474) #30	MAPK9 (ENSCPRG00005011481) #31	ENSCPRG00005011483	GFPT2 (ENSCPRG00005011486) #32	CNOT6 (ENSCPRG00005011509) #34	ENSCPRG00005011522	ADAMTS2 (ENSCPRG00005011547) #16	RUFY1 (ENSCPRG00005011625) #17	ENSCPRG00005011626 ##18	ENSCPRG00005011644	CBY3 (ENSCPRG00005011659) #19	ENSCPRG00005011664 #23	CANX (ENSCPRG00005011671) #21	MAML1 (ENSCPRG00005011695) #22	ENSCPRG00005011702 #23	MGAT4B (ENSCPRG00005011711) #24	SQSTM1 (ENSCPRG00005011756) #26	TBC1D9B (ENSCPRG00005011777) #28	RNF130 (ENSCPRG00005012289) #29	FLT4 (ENSCPRG00005012318) #37	ENSCPRG00005012347	ENSCPRG00005012348	HMGXB3 (ENSCPRG00005012352)	CSF1R (ENSCPRG00005012357)	PDGFRB (ENSCPRG00005012378)	CDX1 (ENSCPRG00005012394)	SLC6A7 (ENSCPRG00005012401)	ENSCPRG00005012440	ARSI (ENSCPRG00005012545)
Cryptodira	ANCESTRAL SPECIES	15	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00990000206303	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000153137.a.b.a #19	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.h #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b
Testudinoidea	ANCESTRAL SPECIES	5	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00990000206303	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000153137.a.b.a #19	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.h #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465.k #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b
Emydidae	ANCESTRAL SPECIES	11	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00990000206303	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000153137.a.b.a #19	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.h #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465.k #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b
Three-toed box turtle	MODERN SPECIES	306	PHYKPL (ENSTMTG00000021627)	CLK4 (ENSTMTG00000021774) #7	ENSTMTG00000021776	ENSTMTG00000021780 #30	ENSTMTG00000021783 #30	MAPK9 (ENSTMTG00000021786) #31	GFPT2 (ENSTMTG00000021791) #32	CNOT6 (ENSTMTG00000021799) #34	ENSTMTG00000021810	ADAMTS2 (ENSTMTG00000021825) #16	RUFY1 (ENSTMTG00000021859) #17	ENSTMTG00000021863 ##18	CBY3 (ENSTMTG00000021868) #19	ENSTMTG00000021871 #23	CANX (ENSTMTG00000021875) #21	MAML1 (ENSTMTG00000021882) #22	ENSTMTG00000021885 #23	MGAT4B (ENSTMTG00000021892) #24	SQSTM1 (ENSTMTG00000021899) #26	MRNIP (ENSTMTG00000021907) #27	ENSTMTG00000021915 #28	ENSTMTG00000021922 #29	ENSTMTG00000021926 #29	FLT4 (ENSTMTG00000021944) #37	ENSTMTG00000022061	ENSTMTG00000022065	HMGXB3 (ENSTMTG00000022068)	CSF1R (ENSTMTG00000022078)	PDGFRB (ENSTMTG00000022087)	ENSTMTG00000022099	SLC6A7 (ENSTMTG00000022103)
painted turtle	MODERN SPECIES	17	WNT8A (ENSCPBG00000008804)	NME5 (ENSCPBG00000008814)	HNRNPAB (ENSCPBG00000008819)	PHYKPL (ENSCPBG00000008828)	CLK4 (ENSCPBG00000008860) #7	RASGEF1C (ENSCPBG00000008876) #30	MAPK9 (ENSCPBG00000008892) #31	GFPT2 (ENSCPBG00000008900) #32	CNOT6 (ENSCPBG00000008908) #34	ADAMTS2 (ENSCPBG00000008971) #16	RUFY1 (ENSCPBG00000009504) #17	ENSCPBG00000009511 ##18	CBY3 (ENSCPBG00000009516) #19	CANX (ENSCPBG00000009538) #21	ENSCPBG00000009559 #23	MAML1 (ENSCPBG00000009562) #22	ENSCPBG00000009566 #23	MGAT4B (ENSCPBG00000009577) #24	SQSTM1 (ENSCPBG00000009588) #26	MRNIP (ENSCPBG00000009592) #27	TBC1D9B (ENSCPBG00000009598) #28	RNF130 (ENSCPBG00000009611) #29	FLT4 (ENSCPBG00000009620) #37	ENSCPBG00000009632	ENSCPBG00000009634	HMGXB3 (ENSCPBG00000009638)	CSF1R (ENSCPBG00000009658)	PDGFRB (ENSCPBG00000009762)	ENSCPBG00000010062	SLC6A7 (ENSCPBG00000010064)	ENSCPBG00000010071
Testudinidae	ANCESTRAL SPECIES	16	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00990000206303	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000153137.a.b.a #19	ENSGT00940000160738.g.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.h #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465.k #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b
Abingdon island giant tortoise	MODERN SPECIES	237											RUFY1 (ENSCABG00000013374) #17	ENSCABG00000013364 ##18	CBY3 (ENSCABG00000013355) #19	ENSCABG00000013352 #23	CANX (ENSCABG00000013349) #21	MAML1 (ENSCABG00000013344) #22	ENSCABG00000013340 #23	MGAT4B (ENSCABG00000013290) #24	SQSTM1 (ENSCABG00000013281) #26	ENSCABG00000013271 #27	TBC1D9B (ENSCABG00000013268) #28	RNF130 (ENSCABG00000013266) #29	FLT4 (ENSCABG00000013263) #37	ENSCABG00000013262	ENSCABG00000013261	HMGXB3 (ENSCABG00000013259)	CSF1R (ENSCABG00000013256)	PDGFRB (ENSCABG00000013252)	ENSCABG00000013250	SLC6A7 (ENSCABG00000013248)	ENSCABG00000013106
Goode s thornscrub tortoise	MODERN SPECIES	22	NME5 (ENSGEVG00005005872)	HNRNPAB (ENSGEVG00005005840)	PHYKPL (ENSGEVG00005005802)	CLK4 (ENSGEVG00005005769) #7	ENSGEVG00005005740 #30	ENSGEVG00005005718 #30	MAPK9 (ENSGEVG00005005690) #31	GFPT2 (ENSGEVG00005005244) #32	CNOT6 (ENSGEVG00005005127) #34	ADAMTS2 (ENSGEVG00005004876) #16	RUFY1 (ENSGEVG00005004747) #17	ENSGEVG00005004646 ##18	CBY3 (ENSGEVG00005004582) #19	ENSGEVG00005004559 #23	CANX (ENSGEVG00005004531) #21	MAML1 (ENSGEVG00005004480) #22	MGAT4B (ENSGEVG00005004436) #24	SQSTM1 (ENSGEVG00005004406) #26	ENSGEVG00005004379 #27	TBC1D9B (ENSGEVG00005004291) #28	RNF130 (ENSGEVG00005004213) #29	FLT4 (ENSGEVG00005004155) #37	ENSGEVG00005004116	ENSGEVG00005004104	HMGXB3 (ENSGEVG00005004074)	CSF1R (ENSGEVG00005004047)	PDGFRB (ENSGEVG00005004021)	ENSGEVG00005015618	SLC6A7 (ENSGEVG00005015551)	ENSGEVG00005015248	ARSI (ENSGEVG00005015155)
Chinese turtle	MODERN SPECIES	2223						MAPK9 (ENSPSIG00000015702) #31	GFPT2 (ENSPSIG00000017124) #32	CNOT6 (ENSPSIG00000017307) #34	ADAMTS2 (ENSPSIG00000017460) #16	ENSPSIG00000018080	RUFY1 (ENSPSIG00000018084) #17	ENSPSIG00000003206 ##18	CBY3 (ENSPSIG00000001279) #19	ENSPSIG00000003648 #23	ENSPSIG00000003895	MAML1 (ENSPSIG00000006251) #22	ENSPSIG00000006651 #23	MGAT4B (ENSPSIG00000006815) #24	SQSTM1 (ENSPSIG00000009647) #26	TBC1D9B (ENSPSIG00000010089) #28	RNF130 (ENSPSIG00000010310) #29	FLT4 (ENSPSIG00000010766) #37	ENSPSIG00000012124	ENSPSIG00000012211	HMGXB3 (ENSPSIG00000012325)	CSF1R (ENSPSIG00000013142)	PDGFRB (ENSPSIG00000013306)	ENSPSIG00000014400	ENSPSIG00000014421	SLC6A7 (ENSPSIG00000014435)	CAMK2A (ENSPSIG00000015140)
Lepidosauria	ANCESTRAL SPECIES	15	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000160738.g.b #23	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.h #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b
tuatara	MODERN SPECIES	76											RUFY1 (ENSSPUG00000012668) #17	ENSSPUG00000012650	ENSSPUG00000012604 ##18	ENSSPUG00000012592 #23	CANX (ENSSPUG00000012543) #21	MAML1 (ENSSPUG00000012521) #22	ENSSPUG00000012505 #23	MGAT4B (ENSSPUG00000012489) #24	SQSTM1 (ENSSPUG00000012466) #26	TBC1D9B (ENSSPUG00000012435) #28	RNF130 (ENSSPUG00000012407) #29	FLT4 (ENSSPUG00000012355) #37	ENSSPUG00000012335	ENSSPUG00000012323	HMGXB3 (ENSSPUG00000012293)	ENSSPUG00000012177
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000157840	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.h #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537.q	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000157840	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000164917	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.h #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00390000006124 #27	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537.q	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b
Common wall lizard	MODERN SPECIES	10	ENSPMRG00000005186	CLK4 (ENSPMRG00000005199) #7	ENSPMRG00000005208	RASGEF1C (ENSPMRG00000005209) #30	ENSPMRG00000005233	MAPK9 (ENSPMRG00000005346) #31	GFPT2 (ENSPMRG00000005986) #32	CNOT6 (ENSPMRG00000006015) #34	ENSPMRG00000006040	ADAMTS2 (ENSPMRG00000006052) #16	RUFY1 (ENSPMRG00000006070) #17	ENSPMRG00000006085 ##18	ENSPMRG00000006105	ENSPMRG00000006119 #19	CANX (ENSPMRG00000006136) #21	MAML1 (ENSPMRG00000006146) #22	LTC4S (ENSPMRG00000006149) #23	MGAT4B (ENSPMRG00000006196) #24	ENSPMRG00000006337	SQSTM1 (ENSPMRG00000006341) #26	TBC1D9B (ENSPMRG00000006347) #28	RNF130 (ENSPMRG00000006358) #29	FLT4 (ENSPMRG00000006396) #37	ENSPMRG00000006576	ENSPMRG00000006587	HMGXB3 (ENSPMRG00000006592)	CSF1R (ENSPMRG00000006617)	PDGFRB (ENSPMRG00000006636)	ENSPMRG00000006678	ENSPMRG00000006684	SLC6A7 (ENSPMRG00000006718)
Argentine black and white tegu	MODERN SPECIES	1	WNT8A (ENSSMRG00000017357)	NME5 (ENSSMRG00000017355)	HNRNPAB (ENSSMRG00000017354)	PHYKPL (ENSSMRG00000017351)	CLK4 (ENSSMRG00000017348) #7	RASGEF1C (ENSSMRG00000017347) #30	MAPK9 (ENSSMRG00000017326) #31	GFPT2 (ENSSMRG00000017323) #32	CNOT6 (ENSSMRG00000017317) #34	ADAMTS2 (ENSSMRG00000017315) #16	RUFY1 (ENSSMRG00000017302) #17	ENSSMRG00000017301 ##18	ENSSMRG00000017247	CBY3 (ENSSMRG00000017244) #19	CANX (ENSSMRG00000017242) #21	MAML1 (ENSSMRG00000017240) #22	LTC4S (ENSSMRG00000017239) #23	MGAT4B (ENSSMRG00000017235) #24	SQSTM1 (ENSSMRG00000017222) #26	MRNIP (ENSSMRG00000017221) #27	TBC1D9B (ENSSMRG00000017219) #28	RNF130 (ENSSMRG00000017217) #29	FLT4 (ENSSMRG00000017187) #37	ENSSMRG00000017184	ENSSMRG00000017161	HMGXB3 (ENSSMRG00000017160)	CSF1R (ENSSMRG00000017157)	PDGFRB (ENSSMRG00000017145)	ENSSMRG00000017111	SLC6A7 (ENSSMRG00000017102)	ENSSMRG00000017099
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00940000167593	ENSGT00940000157840	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.h #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537.q	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b	ENSGT00940000155150.b.b
Lizard	MODERN SPECIES	1	ENSACAG00000016845	ENSACAG00000035594	ENSACAG00000038736	ENSACAG00000037767	CLK4 (ENSACAG00000016756) #7	RASGEF1C (ENSACAG00000016734) #30	ENSACAG00000016677 #31	CNOT6 (ENSACAG00000016548) #34	ENSACAG00000037960	ADAMTS2 (ENSACAG00000016472) #16	RUFY1 (ENSACAG00000016379) #17	ENSACAG00000016323	ENSACAG00000016304	CBY3 (ENSACAG00000025487) #19	CANX (ENSACAG00000016222) #21	MAML1 (ENSACAG00000016211) #22	LTC4S (ENSACAG00000029619) #23	MGAT4B (ENSACAG00000016121) #24	SQSTM1 (ENSACAG00000016080) #26	TBC1D9B (ENSACAG00000016000) #28	RNF130 (ENSACAG00000015967) #29	ENSACAG00000015792 #37	ENSACAG00000015787	ENSACAG00000015780	HMGXB3 (ENSACAG00000015661)	CSF1R (ENSACAG00000015531)	PDGFRB (ENSACAG00000015352)	ENSACAG00000041665	SLC6A7 (ENSACAG00000015182)	ENSACAG00000038325	ENSACAG00000039708
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000167593	ENSGT00940000157840	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327 #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.h #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537.q	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506.a.b	ENSGT00940000155506.b	ENSGT00940000155506.a.a	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823
Indian cobra	MODERN SPECIES	1	NME5 (ENSNNAG00000002331)	PHYKPL (ENSNNAG00000002136)	HNRNPAB (ENSNNAG00000015921)	CLK4 (ENSNNAG00000015875) #7	RASGEF1C (ENSNNAG00000015846) #30	MAPK9 (ENSNNAG00000015812) #31	GFPT2 (ENSNNAG00000015784) #32	CNOT6 (ENSNNAG00000015766) #34	ADAMTS2 (ENSNNAG00000015503) #16	ENSNNAG00000015480	RUFY1 (ENSNNAG00000015452) #17	ENSNNAG00000015290 ##18	ENSNNAG00000015253 ##18	CBY3 (ENSNNAG00000015244) #19	CANX (ENSNNAG00000015226) #21	MAML1 (ENSNNAG00000015209) #22	LTC4S (ENSNNAG00000015194) #23	MGAT4B (ENSNNAG00000015135) #24	SQSTM1 (ENSNNAG00000015110) #26	TBC1D9B (ENSNNAG00000014947) #28	RNF130 (ENSNNAG00000014900) #29	FLT4 (ENSNNAG00000014249) #37	ENSNNAG00000014188	ENSNNAG00000014174	ENSNNAG00000014156	ENSNNAG00000014101	ENSNNAG00000014072	ENSNNAG00000014016	PDGFRB (ENSNNAG00000013967)	ENSNNAG00000013947	SLC6A7 (ENSNNAG00000013888)
Elapidae_a	ANCESTRAL SPECIES	11	ENSGT00940000157840	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327.a #31	ENSGT00940000158327.b #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.h #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537.q	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506.b	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b	ENSGT00940000155150.b.b
Acanthophiinae	ANCESTRAL SPECIES	12	ENSGT00940000167593	ENSGT00940000157840	ENSGT00940000159595	ENSGT00940000154735	ENSGT00940000159222	ENSGT00940000160245 #7	ENSGT00940000161005 #30	ENSGT00940000158327.b #31	ENSGT00940000156413 #32	ENSGT00940000158978 #34	ENSGT00940000156647 #16	ENSGT00940000158334 #17	ENSGT00940000153503.b ##18	ENSGT00940000153137.a.b.a #19	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.h #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37	ENSGT00940000158537.q	ENSGT00940000155973.a	ENSGT00390000006983	ENSGT00940000155506.b	ENSGT00940000157138	ENSGT00940000164078.a	ENSGT00940000160823	ENSGT00940000159769.a.b	ENSGT00940000155150.b.b
Mainland tiger snake	MODERN SPECIES	4	ENSNSUG00000003027	WNT8A (ENSNSUG00000003023)	NME5 (ENSNSUG00000003018)	HNRNPAB (ENSNSUG00000003013)	PHYKPL (ENSNSUG00000003010)	ENSNSUG00000003008 #7	ENSNSUG00000003006 #7	RASGEF1C (ENSNSUG00000003000) #30	MAPK9 (ENSNSUG00000001062) #31	GFPT2 (ENSNSUG00000000642) #32	CNOT6 (ENSNSUG00000000401) #34	ADAMTS2 (ENSNSUG00000000282) #16	RUFY1 (ENSNSUG00000000250) #17	ENSNSUG00000000189 ##18	CANX (ENSNSUG00000000167) #21	MAML1 (ENSNSUG00000000157) #22	LTC4S (ENSNSUG00000000155) #23	MGAT4B (ENSNSUG00000000140) #24	SQSTM1 (ENSNSUG00000000120) #26	TBC1D9B (ENSNSUG00000000054) #28	RNF130 (ENSNSUG00000000017) #29	FLT4 (ENSNSUG00000017387) #37	ENSNSUG00000017386	ENSNSUG00000017385	HMGXB3 (ENSNSUG00000017381)	CSF1R (ENSNSUG00000017380)	PDGFRB (ENSNSUG00000017176)	ENSNSUG00000017175	SLC6A7 (ENSNSUG00000017174)	ENSNSUG00000017173	CAMK2A (ENSNSUG00000017172)
Eastern brown snake	MODERN SPECIES	6	WNT8A (ENSPTXG00000013422)	NME5 (ENSPTXG00000013423)	HNRNPAB (ENSPTXG00000013424)	PHYKPL (ENSPTXG00000013425)	CLK4 (ENSPTXG00000013427) #7	ENSPTXG00000013432 #30	ENSPTXG00000013438 #30	MAPK9 (ENSPTXG00000013445) #31	GFPT2 (ENSPTXG00000013451) #32	CNOT6 (ENSPTXG00000013459) #34	ADAMTS2 (ENSPTXG00000013465) #16	RUFY1 (ENSPTXG00000013471) #17	ENSPTXG00000013472 ##18	CBY3 (ENSPTXG00000013477) #19	CANX (ENSPTXG00000013479) #21	MAML1 (ENSPTXG00000013482) #22	LTC4S (ENSPTXG00000013484) #23	MGAT4B (ENSPTXG00000013485) #24	SQSTM1 (ENSPTXG00000013486) #26	TBC1D9B (ENSPTXG00000013487) #28	RNF130 (ENSPTXG00000013488) #29	FLT4 (ENSPTXG00000013489) #37	ENSPTXG00000013500	ENSPTXG00000013505	HMGXB3 (ENSPTXG00000013506)	CSF1R (ENSPTXG00000013509)	PDGFRB (ENSPTXG00000013519)	ENSPTXG00000013573	SLC6A7 (ENSPTXG00000013578)	ENSPTXG00000013584	CAMK2A (ENSPTXG00000013592)
Blue-lipped sea krait	DUPLICATION
Blue-lipped sea krait	MODERN SPECIES	4904													ENSLLTG00000008347 ##18	CBY3 (ENSLLTG00000008463) #19	CANX (ENSLLTG00000008523) #21	ENSLLTG00000008559 #22
Blue-lipped sea krait	MODERN SPECIES	9093																ENSLLTG00000013494 #22	ENSLLTG00000013275 #23
Anura	ANCESTRAL SPECIES	275														ENSGT00940000160738.d.b #23	ENSGT00950000182915.a.a.a #21	ENSGT00950000183201.b.b.b.a #22	ENSGT00940000160738.d.a #23	ENSGT00940000156526.a #24	ENSGT00390000002781 #26	ENSGT00940000158554 #28	ENSGT00940000157465 #29	ENSGT00940000159358 #37
Frog	MODERN SPECIES	3	adra1b (ENSXETG00000043868)	ENSXETG00000032320	ENSXETG00000046538	ENSXETG00000038193	ENSXETG00000031824	ENSXETG00000049460	glra1 (ENSXETG00000001966)	ENSXETG00000043513	nmur2 (ENSXETG00000001947)	ENSXETG00000044367	gria1 (ENSXETG00000001922)	ENSXETG00000035756	fam114a2 (ENSXETG00000034241)	gtf3c3 (ENSXETG00000027469)	mfap3 (ENSXETG00000003680)	maml1 (ENSXETG00000011243) #22	ltc4s.1 (ENSXETG00000045810) #23	ENSXETG00000043107	mgat4b (ENSXETG00000011234) #24	cracr2a (ENSXETG00000040901)	ENSXETG00000048538	parp11 (ENSXETG00000011229)	tigar (ENSXETG00000005971)	fgf23.2 (ENSXETG00000026353)	fgf23.1 (ENSXETG00000043568)	fgf6 (ENSXETG00000049430)	ENSXETG00000005967	c12orf4 (ENSXETG00000005966)	rad51ap1 (ENSXETG00000011389)	caprin2 (ENSXETG00000007516)	ipo8 (ENSXETG00000007514)
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000017282	ENSLLEG00000017329	ENSLLEG00000017421	ENSLLEG00000017447	PCDH1 (ENSLLEG00000017533)	ENSLLEG00000018025	ENSLLEG00000018042	ENSLLEG00000018064	ENSLLEG00000018110	ENSLLEG00000018145	ENSLLEG00000018393	PCDH12 (ENSLLEG00000018488)	ENSLLEG00000018550 #23	CANX (ENSLLEG00000018685) #21	ENSLLEG00000018852	MAML1 (ENSLLEG00000018881) #22	ENSLLEG00000018955	LTC4S (ENSLLEG00000019025) #23	ENSLLEG00000019099	MGAT4B (ENSLLEG00000019143) #24	ENSLLEG00000019507	ENSLLEG00000019524	UBE2E1 (ENSLLEG00000019548)	ENSLLEG00000019670 #26	TBC1D9B (ENSLLEG00000020024) #28	RNF130 (ENSLLEG00000020465) #29	FLT4 (ENSLLEG00000021066) #37	ENSLLEG00000021342	ENSLLEG00000021380	ENSLLEG00000021510	ENSLLEG00000021532