Hystricomorpha	ANCESTRAL SPECIES	47	ENSGT00410000025695.a #8	ENSGT00390000012913.a #9	ENSGT00940000160926 #10	ENSGT00940000158649	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631	ENSGT00940000153593.c.a #30	ENSGT00940000153593.d ##30	ENSGT00530000064192	ENSGT00940000156705 #31	ENSGT00940000155914 #32	ENSGT00390000018395 #33	ENSGT00950000183049.C ##34
Hystricomorpha_a	ANCESTRAL SPECIES	55	ENSGT00410000025695.a #8	ENSGT00390000012913.a #9	ENSGT00940000160926 #10	ENSGT00940000158649	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631	ENSGT00940000153593.c.a #30	ENSGT00940000156705 #31	ENSGT00940000155914 #32	ENSGT00390000018395 #33	ENSGT00950000183049.C ##34	ENSGT00390000004001 #35	ENSGT00940000161872 #36
Guinea pig	MODERN SPECIES	72	MAU2 (ENSCPOG00000003755) #7	SUGP1 (ENSCPOG00000007797) #8	TM6SF2 (ENSCPOG00000022916) #9	HAPLN4 (ENSCPOG00000023683) #10	NR2C2AP (ENSCPOG00000032927) #11	RFXANK (ENSCPOG00000003121) #12	BORCS8 (ENSCPOG00000036178) #13	MEF2B (ENSCPOG00000032781) #14	TMEM161A (ENSCPOG00000013640) #15	SLC25A42 (ENSCPOG00000013086) #16	ARMC6 (ENSCPOG00000006374) #17	SUGP2 (ENSCPOG00000006372) #18	HOMER3 (ENSCPOG00000004565) #19	DDX49 (ENSCPOG00000013626) #20	COPE (ENSCPOG00000013624) #21	CERS1 (ENSCPOG00000033783) #22	GDF1 (ENSCPOG00000031791) #23	UPF1 (ENSCPOG00000025463) #24	COMP (ENSCPOG00000025029) #25	CRTC1 (ENSCPOG00000034343) #26	KLHL26 (ENSCPOG00000020718) #27	TMEM59L (ENSCPOG00000021490) #28	CRLF1 (ENSCPOG00000021160) #29	UBA52 (ENSCPOG00000025880) #30	FKBP8 (ENSCPOG00000026709) #31	ELL (ENSCPOG00000022431) #32	ISYNA1 (ENSCPOG00000027332) #33	ENSCPOG00000025088 #34	ENSCPOG00000031969 #35	GDF15 (ENSCPOG00000032675) #36	PGPEP1 (ENSCPOG00000031925) #37
Hystricomorpha_b	ANCESTRAL SPECIES	66	ENSGT00410000025695.a #8	ENSGT00390000012913.a #9	ENSGT00940000160926 #10	ENSGT00940000158649	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631	ENSGT00940000153593.c.a #30	ENSGT00940000156705 #31	ENSGT00940000155914 #32	ENSGT00390000018395 #33	ENSGT00950000183049.C ##34	ENSGT00390000004001 #35	ENSGT00940000161872 #36
Long-tailed chinchilla	MODERN SPECIES	231	SUGP1 (ENSCLAG00000003512) #8	TM6SF2 (ENSCLAG00000003633) #9	HAPLN4 (ENSCLAG00000003955) #10	NCAN (ENSCLAG00000004140)	NR2C2AP (ENSCLAG00000004378) #11	RFXANK (ENSCLAG00000004632) #12	BORCS8 (ENSCLAG00000004959) #13	MEF2B (ENSCLAG00000007377) #14	TMEM161A (ENSCLAG00000007578) #15	SLC25A42 (ENSCLAG00000008004) #16	ARMC6 (ENSCLAG00000008215) #17	SUGP2 (ENSCLAG00000011375) #18	HOMER3 (ENSCLAG00000011599) #19	DDX49 (ENSCLAG00000012844) #20	COPE (ENSCLAG00000003621) #21	CERS1 (ENSCLAG00000003897) #22	UPF1 (ENSCLAG00000004037) #24	COMP (ENSCLAG00000005109) #25	CRTC1 (ENSCLAG00000005682) #26	KLHL26 (ENSCLAG00000006029) #27	TMEM59L (ENSCLAG00000006357) #28	CRLF1 (ENSCLAG00000006697) #29	ENSCLAG00000007191	UBA52 (ENSCLAG00000005686) #30	FKBP8 (ENSCLAG00000005953) #31	ELL (ENSCLAG00000007609) #32	ISYNA1 (ENSCLAG00000008992) #33	SSBP4 (ENSCLAG00000013009) ##34	ENSCLAG00000009618 #35	GDF15 (ENSCLAG00000010045) #36	PGPEP1 (ENSCLAG00000010542) #37
Degu	MODERN SPECIES	323	SUGP1 (ENSODEG00000011538) #8	TM6SF2 (ENSODEG00000010936) #9	HAPLN4 (ENSODEG00000011689) #10	NCAN (ENSODEG00000011699)	NR2C2AP (ENSODEG00000011486) #11	RFXANK (ENSODEG00000013006) #12	BORCS8 (ENSODEG00000013003) #13	MEF2B (ENSODEG00000012357) #14	TMEM161A (ENSODEG00000012343) #15	SLC25A42 (ENSODEG00000012168) #16	ARMC6 (ENSODEG00000012613) #17	SUGP2 (ENSODEG00000012058) #18	HOMER3 (ENSODEG00000014870) #19	DDX49 (ENSODEG00000011203) #20	COPE (ENSODEG00000011547) #21	CERS1 (ENSODEG00000011214) #22	GDF1 (ENSODEG00000011857) #23	UPF1 (ENSODEG00000012426) #24	COMP (ENSODEG00000015412) #25	CRTC1 (ENSODEG00000011739) #26	KLHL26 (ENSODEG00000012544) #27	TMEM59L (ENSODEG00000012052) #28	CRLF1 (ENSODEG00000012883) #29	REX1BD (ENSODEG00000013625)	ENSODEG00000012337 #30	ENSODEG00000013486 #31	ELL (ENSODEG00000012821) #32	ISYNA1 (ENSODEG00000011920) #33	SSBP4 (ENSODEG00000012832) ##34	PGPEP1 (ENSODEG00000012364) #37	ENSODEG00000011712
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000039617 #18	ENSHGLG00000042474 #8	TM6SF2 (ENSHGLG00000004113) #9	HAPLN4 (ENSHGLG00000003896) #10	NCAN (ENSHGLG00000034381)	NR2C2AP (ENSHGLG00000033726) #11	RFXANK (ENSHGLG00000003396) #12	MEF2BNB (ENSHGLG00000047513) #13	ENSHGLG00000003123 #14	TMEM161A (ENSHGLG00000009517) #15	SLC25A42 (ENSHGLG00000008826) #16	ARMC6 (ENSHGLG00000008147) #17	HOMER3 (ENSHGLG00000006851) #19	ENSHGLG00000006789 #20	COPE (ENSHGLG00000006648) #21	CERS1 (ENSHGLG00000013716) #22	GDF1 (ENSHGLG00000042377) #23	UPF1 (ENSHGLG00000010900) #24	COMP (ENSHGLG00000009575) #25	ENSHGLG00000041161 #27	TMEM59L (ENSHGLG00000035873) #28	CRLF1 (ENSHGLG00000006747) #29	REX1BD (ENSHGLG00000018788)	UBA52 (ENSHGLG00000019381) ##30	KXD1 (ENSHGLG00000044958)	ENSHGLG00000012226 #31	ENSHGLG00000047901 #32	ELL (ENSHGLG00000011254) #32	ISYNA1 (ENSHGLG00000010290) #33	ENSHGLG00000046442	ENSHGLG00000039382 ##34