Gnathostomata	ANCESTRAL SPECIES																	ENSGT01030000234515.b #22
Euteleostomi	ANCESTRAL SPECIES	1026															ENSGT00390000003478 #21	ENSGT01030000234515.b #22
Sarcopterygii	ANCESTRAL SPECIES	649													ENSGT00940000157413 #24	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22
Tetrapoda	ANCESTRAL SPECIES	50	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416
Amniota	ANCESTRAL SPECIES	23	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000157413 #24	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872	ENSGT00390000015368.a.a
Mammalia	ANCESTRAL SPECIES	39	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00390000015368.a.a
Theria	ANCESTRAL SPECIES	31	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Eutheria	ANCESTRAL SPECIES	24	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Primates	ANCESTRAL SPECIES	18	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Catarrhini	ANCESTRAL SPECIES		ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00910000148304	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00910000148304	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Rhinopithecus	ANCESTRAL SPECIES		ENSGT00410000025695.a.n.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872
Golden snub-nosed monkey	MODERN SPECIES	2586	SUGP1 (ENSRROG00000030048) #7	TM6SF2 (ENSRROG00000036675) #8	HAPLN4 (ENSRROG00000029649) #9	NCAN (ENSRROG00000037872) #10	NR2C2AP (ENSRROG00000033994) #11	RFXANK (ENSRROG00000028283) #12	BORCS8 (ENSRROG00000045680) #13	MEF2B (ENSRROG00000033740) #14	TMEM161A (ENSRROG00000024629) #15	SLC25A42 (ENSRROG00000040352) #16	ARMC6 (ENSRROG00000034739) #17	SUGP2 (ENSRROG00000029264) #18	HOMER3 (ENSRROG00000038822) #19	DDX49 (ENSRROG00000032460) #20	COPE (ENSRROG00000032396) #21	CERS1 (ENSRROG00000038529) #22	GDF1 (ENSRROG00000041769) #23	UPF1 (ENSRROG00000040935) #24	COMP (ENSRROG00000043878) #25	CRTC1 (ENSRROG00000039912) #26	KLHL26 (ENSRROG00000030821) #27	TMEM59L (ENSRROG00000024021) #28	CRLF1 (ENSRROG00000030939) #29	REX1BD (ENSRROG00000030965) #30	UBA52 (ENSRROG00000033884) #31	ENSRROG00000044752 #32	FKBP8 (ENSRROG00000022396) #33	ELL (ENSRROG00000042635) #34	ISYNA1 (ENSRROG00000041153) #35	SSBP4 (ENSRROG00000037587) #36	LRRC25 (ENSRROG00000032505) #37
Black snub-nosed monkey	MODERN SPECIES	1576	TM6SF2 (ENSRBIG00000035648) #8	HAPLN4 (ENSRBIG00000028696) #9	NCAN (ENSRBIG00000028711) #10	RFXANK (ENSRBIG00000027696) #12	NR2C2AP (ENSRBIG00000035480) #11	BORCS8 (ENSRBIG00000044655) #13	MEF2B (ENSRBIG00000037482) #14	TMEM161A (ENSRBIG00000035635) #15	SLC25A42 (ENSRBIG00000027977) #16	ENSRBIG00000034545	ARMC6 (ENSRBIG00000038109) #17	SUGP2 (ENSRBIG00000020354) #18	HOMER3 (ENSRBIG00000038778) #19	DDX49 (ENSRBIG00000030758) #20	COPE (ENSRBIG00000040843) #21	CERS1 (ENSRBIG00000036984) #22	UPF1 (ENSRBIG00000013894) #24	COMP (ENSRBIG00000006193) #25	CRTC1 (ENSRBIG00000036709) #26	KLHL26 (ENSRBIG00000023916) #27
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00910000148304	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00910000148304	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Macaca	ANCESTRAL SPECIES	21	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00910000148304	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00390000012198	ENSGT00410000025695.a.n.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT01100000263493.a.a.a.b.a.a.b.a.a.a.b	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Crab-eating macaque	MODERN SPECIES	10	SUGP1 (ENSMFAG00000031157) #7	TM6SF2 (ENSMFAG00000006917) #8	HAPLN4 (ENSMFAG00000029816) #9	NCAN (ENSMFAG00000043588) #10	NR2C2AP (ENSMFAG00000042311) #11	RFXANK (ENSMFAG00000003753) #12	MEF2B (ENSMFAG00000032755) #14	SLC25A42 (ENSMFAG00000039473) #16	TMEM161A (ENSMFAG00000043553) #15	ARMC6 (ENSMFAG00000000505) #17	SUGP2 (ENSMFAG00000040352) #18	HOMER3 (ENSMFAG00000031509) #19	DDX49 (ENSMFAG00000044697) #20	COPE (ENSMFAG00000038870) #21	GDF1 (ENSMFAG00000064570) #23	CERS1 (ENSMFAG00000044990) #22	ENSMFAG00000065281 #24	ENSMFAG00000037748 #24	ENSMFAG00000052968	ENSMFAG00000004008 #25	CRTC1 (ENSMFAG00000045375) #26	KLHL26 (ENSMFAG00000062634) #27	ENSMFAG00000044055 #27	ENSMFAG00000045477 #28	CRLF1 (ENSMFAG00000001307) #29	REX1BD (ENSMFAG00000044115) #30	UBA52 (ENSMFAG00000049103) #31	KXD1 (ENSMFAG00000044925)	FKBP8 (ENSMFAG00000034676) #33	ELL (ENSMFAG00000044774) #34	ISYNA1 (ENSMFAG00000044263) #35
Rhesus	MODERN SPECIES	10	MAU2 (ENSMMUG00000008931)	SUGP1 (ENSMMUG00000028834) #7	TM6SF2 (ENSMMUG00000008576) #8	HAPLN4 (ENSMMUG00000008578) #9	NCAN (ENSMMUG00000062498) #10	NR2C2AP (ENSMMUG00000010723) #11	RFXANK (ENSMMUG00000010722) #12	BORCS8 (ENSMMUG00000018368) #14	TMEM161A (ENSMMUG00000018367) #15	SLC25A42 (ENSMMUG00000019669) #16	ARMC6 (ENSMMUG00000019668) #17	SUGP2 (ENSMMUG00000019665) #18	HOMER3 (ENSMMUG00000023294) #19	DDX49 (ENSMMUG00000023293) #20	COPE (ENSMMUG00000023291) #21	CERS1 (ENSMMUG00000059247) #22	GDF1 (ENSMMUG00000023290) #23	UPF1 (ENSMMUG00000023286) #24	ENSMMUG00000056644	COMP (ENSMMUG00000006511) #25	CRTC1 (ENSMMUG00000006509) #26	KLHL26 (ENSMMUG00000064204) #27	CRLF1 (ENSMMUG00000060102) #29	TMEM59L (ENSMMUG00000009988) #28	ENSMMUG00000054512	UBA52 (ENSMMUG00000064485) #31	KXD1 (ENSMMUG00000016085)	FKBP8 (ENSMMUG00000009587) #33	ELL (ENSMMUG00000013671) #34	ISYNA1 (ENSMMUG00000021183) #35	SSBP4 (ENSMMUG00000021182) #36
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00410000025695.a.n.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00410000025695.a.n.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872
Drill	MODERN SPECIES	160	SUGP1 (ENSMLEG00000043364) #7	TM6SF2 (ENSMLEG00000027647) #8	HAPLN4 (ENSMLEG00000043866) #9	NCAN (ENSMLEG00000035960) #10	NR2C2AP (ENSMLEG00000026610) #11	RFXANK (ENSMLEG00000007628) #12	BORCS8 (ENSMLEG00000036175) #13	MEF2B (ENSMLEG00000002780) #14	TMEM161A (ENSMLEG00000041570) #15	SLC25A42 (ENSMLEG00000038599) #16	ARMC6 (ENSMLEG00000039585) #17	SUGP2 (ENSMLEG00000036719) #18	HOMER3 (ENSMLEG00000042234) #19	DDX49 (ENSMLEG00000042550) #20	COPE (ENSMLEG00000042923) #21	CERS1 (ENSMLEG00000020659) #22	UPF1 (ENSMLEG00000028404) #24	COMP (ENSMLEG00000028753) #25	CRTC1 (ENSMLEG00000044311) #26	KLHL26 (ENSMLEG00000038620) #27	TMEM59L (ENSMLEG00000032687) #28	CRLF1 (ENSMLEG00000041126) #29	REX1BD (ENSMLEG00000041099) #30	UBA52 (ENSMLEG00000038811) #31	FKBP8 (ENSMLEG00000029078) #33	ELL (ENSMLEG00000023490) #34	ISYNA1 (ENSMLEG00000033928) #35	SSBP4 (ENSMLEG00000024111) #36	LRRC25 (ENSMLEG00000023417) #37	GDF15 (ENSMLEG00000043577)	PGPEP1 (ENSMLEG00000041283)
Sooty mangabey	MODERN SPECIES	347	SUGP1 (ENSCATG00000033059) #7	TM6SF2 (ENSCATG00000038371) #8	HAPLN4 (ENSCATG00000033215) #9	NCAN (ENSCATG00000033037) #10	NR2C2AP (ENSCATG00000035313) #11	RFXANK (ENSCATG00000032949) #12	BORCS8 (ENSCATG00000034039) #13	MEF2B (ENSCATG00000031174) #14	TMEM161A (ENSCATG00000036119) #15	SLC25A42 (ENSCATG00000035155) #16	ARMC6 (ENSCATG00000032065) #17	SUGP2 (ENSCATG00000029755) #18	HOMER3 (ENSCATG00000036483) #19	DDX49 (ENSCATG00000032577) #20	COPE (ENSCATG00000038467) #21	CERS1 (ENSCATG00000033850) #22	GDF1 (ENSCATG00000033208) #23	UPF1 (ENSCATG00000040306) #24	ENSCATG00000029785	COMP (ENSCATG00000021027) #25	CRTC1 (ENSCATG00000037923) #26	KLHL26 (ENSCATG00000040338) #27	TMEM59L (ENSCATG00000031976) #28	CRLF1 (ENSCATG00000031612) #29	REX1BD (ENSCATG00000032246) #30	UBA52 (ENSCATG00000032279) #31	FKBP8 (ENSCATG00000034787) #33	ELL (ENSCATG00000017360) #34	ISYNA1 (ENSCATG00000029593) #35	SSBP4 (ENSCATG00000028212) #36	LRRC25 (ENSCATG00000038001) #37
Olive baboon	MODERN SPECIES	12	SUGP1 (ENSPANG00000014398) #7	TM6SF2 (ENSPANG00000017375) #8	HAPLN4 (ENSPANG00000004385) #9	NCAN (ENSPANG00000017942) #10	NR2C2AP (ENSPANG00000017708) #11	RFXANK (ENSPANG00000011633) #12	BORCS8 (ENSPANG00000034354) #13	MEF2B (ENSPANG00000023043) #14	TMEM161A (ENSPANG00000023920) #15	SLC25A42 (ENSPANG00000004441) #16	ARMC6 (ENSPANG00000002531) #17	SUGP2 (ENSPANG00000004442) #18	HOMER3 (ENSPANG00000004386) #19	DDX49 (ENSPANG00000003161) #20	COPE (ENSPANG00000002532) #21	CERS1 (ENSPANG00000005280) #22	GDF1 (ENSPANG00000004387) #23	UPF1 (ENSPANG00000008847) #24	COMP (ENSPANG00000004388) #25	CRTC1 (ENSPANG00000014162) #26	KLHL26 (ENSPANG00000023921) #27	TMEM59L (ENSPANG00000018010) #28	CRLF1 (ENSPANG00000011399) #29	REX1BD (ENSPANG00000032734) #30	UBA52 (ENSPANG00000048839) #31	KXD1 (ENSPANG00000004389)	FKBP8 (ENSPANG00000012120) #33	ELL (ENSPANG00000015376) #34	ISYNA1 (ENSPANG00000004910) #35	SSBP4 (ENSPANG00000008549) #36	LRRC25 (ENSPANG00000006961) #37
Vervet Monkey	MODERN SPECIES	25	SUGP1 (ENSCSAG00000005148) #7	TM6SF2 (ENSCSAG00000005157) #8	HAPLN4 (ENSCSAG00000005162) #9	NCAN (ENSCSAG00000005190) #10	NR2C2AP (ENSCSAG00000005205) #11	RFXANK (ENSCSAG00000005210) #12	BORCS8 (ENSCSAG00000005214) #13	MEF2B (ENSCSAG00000005217) #14	TMEM161A (ENSCSAG00000005220) #15	SLC25A42 (ENSCSAG00000005223) #16	ARMC6 (ENSCSAG00000005225) #17	SUGP2 (ENSCSAG00000005226) #18	HOMER3 (ENSCSAG00000005233) #19	DDX49 (ENSCSAG00000005251) #20	COPE (ENSCSAG00000005262) #21	CERS1 (ENSCSAG00000005267) #22	GDF1 (ENSCSAG00000005273) #23	UPF1 (ENSCSAG00000005276) #24	COMP (ENSCSAG00000005292) #25	CRTC1 (ENSCSAG00000005304) #26	KLHL26 (ENSCSAG00000005309) #27	TMEM59L (ENSCSAG00000005314) #28	CRLF1 (ENSCSAG00000005321) #29	REX1BD (ENSCSAG00000005329) #30	UBA52 (ENSCSAG00000005332) #31	KXD1 (ENSCSAG00000005336)	FKBP8 (ENSCSAG00000005342) #33	ELL (ENSCSAG00000005345) #34	ISYNA1 (ENSCSAG00000005350) #35	SSBP4 (ENSCSAG00000005355) #36	LRRC25 (ENSCSAG00000005359) #37
Hominoidea	ANCESTRAL SPECIES		ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00910000148304	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C.e.a #36
Hominidae	ANCESTRAL SPECIES		ENSGT00410000025695.a.n.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C.e.a #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00410000025695.a.n.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C.e.a #36
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00410000025695.a.n.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C.e.a #36
Pan	ANCESTRAL SPECIES	14	ENSGT00410000025695.a.n.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856.d #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C.e.a #36	ENSGT00390000004001 #37
Bonobo	MODERN SPECIES	10	SUGP1 (ENSPPAG00000037102) #7	TM6SF2 (ENSPPAG00000043499) #8	HAPLN4 (ENSPPAG00000013291) #9	NCAN (ENSPPAG00000003961) #10	NR2C2AP (ENSPPAG00000008303) #11	RFXANK (ENSPPAG00000032045) #12	BORCS8 (ENSPPAG00000033735) #13	MEF2B (ENSPPAG00000029747) #14	TMEM161A (ENSPPAG00000041901) #15	SLC25A42 (ENSPPAG00000036060) #16	ARMC6 (ENSPPAG00000040716) #17	SUGP2 (ENSPPAG00000043787) #18	HOMER3 (ENSPPAG00000037113) #19	DDX49 (ENSPPAG00000035217) #20	COPE (ENSPPAG00000020767) #21	CERS1 (ENSPPAG00000036380) #22	UPF1 (ENSPPAG00000043884) #24	COMP (ENSPPAG00000040783) #25	CRTC1 (ENSPPAG00000003288) #26	KLHL26 (ENSPPAG00000039902) #27	TMEM59L (ENSPPAG00000029514) #28	CRLF1 (ENSPPAG00000041635) #29	ENSPPAG00000039468	REX1BD (ENSPPAG00000043331) #30	ENSPPAG00000042675 #31	FKBP8 (ENSPPAG00000012972) #33	ELL (ENSPPAG00000029139) #34	ISYNA1 (ENSPPAG00000010473) #35	SSBP4 (ENSPPAG00000041039) #36	LRRC25 (ENSPPAG00000042781) #37	GDF15 (ENSPPAG00000038519)
Chimpanzee	MODERN SPECIES	10	SUGP1 (ENSPTRG00000010737) #7	TM6SF2 (ENSPTRG00000010736) #8	HAPLN4 (ENSPTRG00000033676) #9	NCAN (ENSPTRG00000010734) #10	NR2C2AP (ENSPTRG00000010733) #11	RFXANK (ENSPTRG00000010732) #12	BORCS8 (ENSPTRG00000039907) ##13	MEF2B (ENSPTRG00000010731) #14	TMEM161A (ENSPTRG00000010730) #15	SLC25A42 (ENSPTRG00000010729) #16	ARMC6 (ENSPTRG00000010728) #17	SUGP2 (ENSPTRG00000010727) #18	HOMER3 (ENSPTRG00000010726) #19	DDX49 (ENSPTRG00000010725) #20	COPE (ENSPTRG00000010723) #21	CERS1 (ENSPTRG00000039869) #22	GDF1 (ENSPTRG00000050095) #23	UPF1 (ENSPTRG00000010721) #24	COMP (ENSPTRG00000010720) #25	CRTC1 (ENSPTRG00000010719) #26	KLHL26 (ENSPTRG00000010718) #27	TMEM59L (ENSPTRG00000010717) #28	ENSPTRG00000044633	CRLF1 (ENSPTRG00000010716) #29	REX1BD (ENSPTRG00000010715) #30	KXD1 (ENSPTRG00000010713) #31	FKBP8 (ENSPTRG00000010712) #33	ELL (ENSPTRG00000010711) #34	ENSPTRG00000045918 #35	ENSPTRG00000046798	ENSPTRG00000049787 #36
Human	MODERN SPECIES	10	TM6SF2 (ENSG00000213996) #8	HAPLN4 (ENSG00000187664) #9	NCAN (ENSG00000130287) #10	NR2C2AP (ENSG00000184162) #11	RFXANK (ENSG00000064490) #12	BORCS8 (ENSG00000254901) #13	BORCS8-MEF2B (ENSG00000064489)	MEF2B (ENSG00000213999) #14	TMEM161A (ENSG00000064545) #15	SLC25A42 (ENSG00000181035) #16	ARMC6 (ENSG00000105676) #17	SUGP2 (ENSG00000064607) #18	HOMER3 (ENSG00000051128) #19	DDX49 (ENSG00000105671) #20	COPE (ENSG00000105669) #21	CERS1 (ENSG00000223802) #22	GDF1 (ENSG00000130283) #23	UPF1 (ENSG00000005007) #24	COMP (ENSG00000105664) #25	CRTC1 (ENSG00000105662) #26	KLHL26 (ENSG00000167487) #27	TMEM59L (ENSG00000105696) #28	REX1BD (ENSG00000006015) #30	CRLF1 (ENSG00000006016) #29	UBA52 (ENSG00000221983) #31	KXD1 (ENSG00000105700)	FKBP8 (ENSG00000105701) #33	ELL (ENSG00000105656) #34	ISYNA1 (ENSG00000105655) #35	SSBP4 (ENSG00000130511) #36	LRRC25 (ENSG00000175489) #37
Orangutan	MODERN SPECIES	10	SUGP1 (ENSPPYG00000009766) #7	TM6SF2 (ENSPPYG00000009765) #8	HAPLN4 (ENSPPYG00000009764) #9	NCAN (ENSPPYG00000009763) #10	NR2C2AP (ENSPPYG00000009762) #11	RFXANK (ENSPPYG00000009761) #12	BORCS8 (ENSPPYG00000039532) #13	MEF2B (ENSPPYG00000009760) #14	TMEM161A (ENSPPYG00000009759) #15	SLC25A42 (ENSPPYG00000009758) #16	ARMC6 (ENSPPYG00000009757) #17	SUGP2 (ENSPPYG00000009756) #18	HOMER3 (ENSPPYG00000035001) #19	DDX49 (ENSPPYG00000009755) #20	COPE (ENSPPYG00000009753) #21	CERS1 (ENSPPYG00000029471) #22	UPF1 (ENSPPYG00000009752) #24	COMP (ENSPPYG00000036755) #25	CRTC1 (ENSPPYG00000009751) #26	KLHL26 (ENSPPYG00000009750) #27	TMEM59L (ENSPPYG00000009749) #28	CRLF1 (ENSPPYG00000009748) #29	REX1BD (ENSPPYG00000009747) #30	UBA52 (ENSPPYG00000034989) #31	ENSPPYG00000034496	FKBP8 (ENSPPYG00000009744) #33	ELL (ENSPPYG00000037377) #34	ISYNA1 (ENSPPYG00000009742) #35	SSBP4 (ENSPPYG00000009741) #36	LRRC25 (ENSPPYG00000009740) #37	GDF15 (ENSPPYG00000009739)
Platyrrhini	ANCESTRAL SPECIES	25	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081.g.a #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395.l #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Cebidae	ANCESTRAL SPECIES	8	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081.g.a #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395.l.c #35	ENSGT00950000183049.C #36	ENSGT00390000004001.a #37
Marmoset	MODERN SPECIES	14	TM6SF2 (ENSCJAG00000039656) #8	HAPLN4 (ENSCJAG00000073329) #9	ENSCJAG00000070942	NCAN (ENSCJAG00000008512) #10	NR2C2AP (ENSCJAG00000019782) #11	RFXANK (ENSCJAG00000019775) #12	BORCS8 (ENSCJAG00000046526) #13	MEF2B (ENSCJAG00000019767) #14	TMEM161A (ENSCJAG00000019759) #15	SLC25A42 (ENSCJAG00000044017) #16	ARMC6 (ENSCJAG00000019747) #17	SUGP2 (ENSCJAG00000019714) #18	HOMER3 (ENSCJAG00000080144) #19	DDX49 (ENSCJAG00000042114) #20	COPE (ENSCJAG00000019706) #21	CERS1 (ENSCJAG00000019660) #22	UPF1 (ENSCJAG00000019627) #24	COMP (ENSCJAG00000001175) #25	CRTC1 (ENSCJAG00000007421) #26	KLHL26 (ENSCJAG00000007445) #27	TMEM59L (ENSCJAG00000007447) #28	CRLF1 (ENSCJAG00000007427) #29	ENSCJAG00000007459 #30	ENSCJAG00000053720 ##31	KXD1 (ENSCJAG00000007479)	FKBP8 (ENSCJAG00000039606) #33	ELL (ENSCJAG00000015279) #34	ENSCJAG00000014230 #35	SSBP4 (ENSCJAG00000014185) #36	ENSCJAG00000000915 #37	GDF15 (ENSCJAG00000048614)
Cebidae_a	ANCESTRAL SPECIES	48	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081.g.a #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.g #33	ENSGT00940000155914 #34	ENSGT00390000018395.l.c #35	ENSGT00950000183049.C #36	ENSGT00390000004001.a #37
Capuchin	MODERN SPECIES	280	SUGP1 (ENSCCAG00000024177) #7	TM6SF2 (ENSCCAG00000030646) #8	HAPLN4 (ENSCCAG00000030280) #9	NCAN (ENSCCAG00000029973) #10	NR2C2AP (ENSCCAG00000034992) #11	RFXANK (ENSCCAG00000034756) #12	BORCS8 (ENSCCAG00000026464) #13	MEF2B (ENSCCAG00000025516) #14	ENSCCAG00000034387 #15	SLC25A42 (ENSCCAG00000028461) #16	ARMC6 (ENSCCAG00000027993) #17	SUGP2 (ENSCCAG00000023178) #18	HOMER3 (ENSCCAG00000024819) #19	DDX49 (ENSCCAG00000036092) #20	COPE (ENSCCAG00000036516) #21	CERS1 (ENSCCAG00000033033) #22	GDF1 (ENSCCAG00000027600) #23	UPF1 (ENSCCAG00000032175) #24	COMP (ENSCCAG00000032561) #25	CRTC1 (ENSCCAG00000023281) #26	KLHL26 (ENSCCAG00000019068) #27	TMEM59L (ENSCCAG00000030314) #28	CRLF1 (ENSCCAG00000027668) #29	REX1BD (ENSCCAG00000025734) #30	UBA52 (ENSCCAG00000020993) #31	KXD1 (ENSCCAG00000037734)	FKBP8 (ENSCCAG00000026822) #33	ELL (ENSCCAG00000018316) #34	ENSCCAG00000034050 #35	SSBP4 (ENSCCAG00000028026) #36	GDF15 (ENSCCAG00000024961)
Bolivian squirrel monkey	MODERN SPECIES	199	SUGP1 (ENSSBOG00000020160) #7	TM6SF2 (ENSSBOG00000031897) #8	HAPLN4 (ENSSBOG00000028603) #9	NCAN (ENSSBOG00000033005) #10	NR2C2AP (ENSSBOG00000031337) #11	RFXANK (ENSSBOG00000022019) #12	BORCS8 (ENSSBOG00000022945) #13	MEF2B (ENSSBOG00000024550) #14	TMEM161A (ENSSBOG00000031066) #15	SLC25A42 (ENSSBOG00000024288) #16	ENSSBOG00000024227 #17	SUGP2 (ENSSBOG00000020629) #18	HOMER3 (ENSSBOG00000030722) #19	DDX49 (ENSSBOG00000035812) #20	COPE (ENSSBOG00000014113) #21	CERS1 (ENSSBOG00000000038) #22	GDF1 (ENSSBOG00000035053) #23	UPF1 (ENSSBOG00000023632) #24	COMP (ENSSBOG00000003799) #25	CRTC1 (ENSSBOG00000032842) #26	KLHL26 (ENSSBOG00000031453) #27	TMEM59L (ENSSBOG00000019651) #28	CRLF1 (ENSSBOG00000029563) #29	REX1BD (ENSSBOG00000030684) #30	UBA52 (ENSSBOG00000024000) #31	FKBP8 (ENSSBOG00000026752) #33	ELL (ENSSBOG00000025773) #34	ENSSBOG00000028796 #35	SSBP4 (ENSSBOG00000023739) #36	ENSSBOG00000035371 #37	GDF15 (ENSSBOG00000031274)
Tarsier	MODERN SPECIES	3161																CERS1 (ENSTSYG00000036781) #22
Strepsirrhini	ANCESTRAL SPECIES	33	ENSGT00410000025695.a.l #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Lemuriformes	ANCESTRAL SPECIES	45	ENSGT00410000025695.a.l #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Lemuriformes_a	ANCESTRAL SPECIES	65	ENSGT00410000025695.a.l #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Greater bamboo lemur	MODERN SPECIES	392	SUGP1 (ENSPSMG00000002255) #7	TM6SF2 (ENSPSMG00000002208) #8	HAPLN4 (ENSPSMG00000002199) #9	NCAN (ENSPSMG00000002186) #10	NR2C2AP (ENSPSMG00000002131) #11	RFXANK (ENSPSMG00000002047) #12	BORCS8 (ENSPSMG00000002009) #13	MEF2B (ENSPSMG00000001996) #14	TMEM161A (ENSPSMG00000001938) #15	SLC25A42 (ENSPSMG00000001893) #16	ARMC6 (ENSPSMG00000001861) #17	SUGP2 (ENSPSMG00000001742) #18	HOMER3 (ENSPSMG00000001606) #19	DDX49 (ENSPSMG00000001520) #20	COPE (ENSPSMG00000001405) #21	CERS1 (ENSPSMG00000001173) #22	GDF1 (ENSPSMG00000001150) #23	UPF1 (ENSPSMG00000001054) #24	COMP (ENSPSMG00000000819) #25	CRTC1 (ENSPSMG00000000672) #26	KLHL26 (ENSPSMG00000000655) #27	TMEM59L (ENSPSMG00000000639) #28	CRLF1 (ENSPSMG00000000604) #29	REX1BD (ENSPSMG00000000580) #30	UBA52 (ENSPSMG00000000564) #31	KXD1 (ENSPSMG00000000536)	FKBP8 (ENSPSMG00000000488) #33	ELL (ENSPSMG00000000458) #34	ISYNA1 (ENSPSMG00000000412) #35	SSBP4 (ENSPSMG00000000331) #36	LRRC25 (ENSPSMG00000000196) #37
Bushbaby	MODERN SPECIES	220	ENSOGAG00000009975 #7	TM6SF2 (ENSOGAG00000028833) #8	HAPLN4 (ENSOGAG00000009972) #9	NCAN (ENSOGAG00000010954) #10	NR2C2AP (ENSOGAG00000033463) #11	RFXANK (ENSOGAG00000010950) #12	BORCS8 (ENSOGAG00000028427) #13	MEF2B (ENSOGAG00000001694) #14	TMEM161A (ENSOGAG00000015720) #15	SLC25A42 (ENSOGAG00000007251) #16	ARMC6 (ENSOGAG00000007536) #17	SUGP2 (ENSOGAG00000024068) #18	HOMER3 (ENSOGAG00000008261) #19	DDX49 (ENSOGAG00000008259) #20	COPE (ENSOGAG00000031639) #21	CERS1 (ENSOGAG00000033679) #22	GDF1 (ENSOGAG00000012872) #23	UPF1 (ENSOGAG00000012866) #24	COMP (ENSOGAG00000004930) #25	CRTC1 (ENSOGAG00000004927) #26	KLHL26 (ENSOGAG00000004926) #27	TMEM59L (ENSOGAG00000004923) #28	CRLF1 (ENSOGAG00000004920) #29	REX1BD (ENSOGAG00000033304) #30	UBA52 (ENSOGAG00000028000) #31	KXD1 (ENSOGAG00000007523)	FKBP8 (ENSOGAG00000007440) #33	ENSOGAG00000030550 #34	ENSOGAG00000007437 #34	ISYNA1 (ENSOGAG00000007433) #35	SSBP4 (ENSOGAG00000007430) #36
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000183049.E ##36
Glires	ANCESTRAL SPECIES	21	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000183049.E ##36
Rodentia	ANCESTRAL SPECIES	17	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Rodentia_B	ANCESTRAL SPECIES	37	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000153593.c.b.k ##31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Kangaroo rat	MODERN SPECIES	427	Mau2 (ENSDORG00000004918)	ENSDORG00000024315 #7	Tm6sf2 (ENSDORG00000004913) #8	Hapln4 (ENSDORG00000004912) #9	Nr2c2ap (ENSDORG00000001440) #11	Rfxank (ENSDORG00000001449) #12	Borcs8 (ENSDORG00000027906) #13	ENSDORG00000011003 #14	ENSDORG00000010999 #15	Slc25a42 (ENSDORG00000010998) #16	ENSDORG00000004418 #17	Sugp2 (ENSDORG00000011519) #18	ENSDORG00000004302 #19	Ddx49 (ENSDORG00000004301) #20	Cope (ENSDORG00000004298) #21	ENSDORG00000023557 #22	Upf1 (ENSDORG00000009984) #24	Comp (ENSDORG00000027719) #25	Crtc1 (ENSDORG00000026183) #26	Klhl26 (ENSDORG00000000436) #27	Tmem59l (ENSDORG00000024894) #28	Gm11808 (ENSDORG00000026093) ##31	ENSDORG00000025514	Fkbp8 (ENSDORG00000010135) #33	Isyna1 (ENSDORG00000025359) #35	ENSDORG00000014394	Lsm4 (ENSDORG00000024225)	Rab3a (ENSDORG00000009070)	Mpv17l2 (ENSDORG00000009072)	ENSDORG00000004244	ENSDORG00000028690
Myomorpha	ANCESTRAL SPECIES	43	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000153593.c.b.k ##31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Muroidea	ANCESTRAL SPECIES	47	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872
Muroidea_A	ANCESTRAL SPECIES	28	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872
Cricetidae	ANCESTRAL SPECIES	30	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872
Cricetinae	ANCESTRAL SPECIES	36	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872
Chinese hamster chok1gshd	MODERN SPECIES	184	Sugp1 (ENSCGRG00001021250) #7	Tm6sf2 (ENSCGRG00001019424) #8	Hapln4 (ENSCGRG00001018509) #9	Ncan (ENSCGRG00001015055) #10	Nr2c2ap (ENSCGRG00001011302) #11	Rfxank (ENSCGRG00001000782) #12	Borcs8 (ENSCGRG00001020163) #13	Mef2b (ENSCGRG00001014460) #14	Tmem161a (ENSCGRG00001022808) #15	Slc25a42 (ENSCGRG00001022045) #16	Armc6 (ENSCGRG00001019296) #17	Sugp2 (ENSCGRG00001018264) #18	Homer3 (ENSCGRG00001014952) #19	Ddx49 (ENSCGRG00001009467) #20	COPE (ENSCGRG00001024248) #21	ENSCGRG00001019774 #22	ENSCGRG00001006921 #23	Upf1 (ENSCGRG00001021067) #24	Comp (ENSCGRG00001009171) #25	Crtc1 (ENSCGRG00001002202) #26	Klhl26 (ENSCGRG00001020014) #27	Tmem59l (ENSCGRG00001018799) #28	Crlf1 (ENSCGRG00001017905) #29	Rex1bd (ENSCGRG00001023832) #30	Uba52 (ENSCGRG00001018293) #31	Fkbp8 (ENSCGRG00001012652) #33	Ell (ENSCGRG00001009009) #34	Isyna1 (ENSCGRG00001022885) #35	Ssbp4 (ENSCGRG00001016735) #36	Lrrc25 (ENSCGRG00001015091) #37	Gdf15 (ENSCGRG00001016811)
Golden Hamster	MODERN SPECIES	831	Sugp1 (ENSMAUG00000016683) #7	Tm6sf2 (ENSMAUG00000001556) #8	Hapln4 (ENSMAUG00000011983) #9	Ncan (ENSMAUG00000007276) #10	Nr2c2ap (ENSMAUG00000003921) #11	Rfxank (ENSMAUG00000002477) #12	Borcs8 (ENSMAUG00000014785) #13	Mef2b (ENSMAUG00000006774) #14	Tmem161a (ENSMAUG00000011694) #15	Slc25a42 (ENSMAUG00000018082) #16	Armc6 (ENSMAUG00000011324) #17	Sugp2 (ENSMAUG00000011371) #18	Homer3 (ENSMAUG00000014150) #19	Ddx49 (ENSMAUG00000010235) #20	Cope (ENSMAUG00000016322) #21	ENSMAUG00000011350 #22	ENSMAUG00000012872 #23	Upf1 (ENSMAUG00000011398) #24	Comp (ENSMAUG00000010602) #25	Crtc1 (ENSMAUG00000019225) #26	Klhl26 (ENSMAUG00000021352) #27	Tmem59l (ENSMAUG00000006146) #28	Crlf1 (ENSMAUG00000021052) #29	Rex1bd (ENSMAUG00000015830) #30	Uba52 (ENSMAUG00000002775) #31	Fkbp8 (ENSMAUG00000010945) #33	Ell (ENSMAUG00000014805) #34	Isyna1 (ENSMAUG00000021573) #35	Ssbp4 (ENSMAUG00000011895) #36	Lrrc25 (ENSMAUG00000018197) #37	Gdf15 (ENSMAUG00000014895)
Cricetidae_B	ANCESTRAL SPECIES	17	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872
Northern American deer mouse	MODERN SPECIES	8	Sugp1 (ENSPEMG00000009253) #7	Tm6sf2 (ENSPEMG00000016397) #8	Hapln4 (ENSPEMG00000029211) #9	Ncan (ENSPEMG00000012564) #10	Nr2c2ap (ENSPEMG00000001962) #11	Rfxank (ENSPEMG00000007761) #12	Borcs8 (ENSPEMG00000010340) #13	Mef2b (ENSPEMG00000018054) #14	Tmem161a (ENSPEMG00000016451) #15	Slc25a42 (ENSPEMG00000011354) #16	Armc6 (ENSPEMG00000012468) #17	Sugp2 (ENSPEMG00000009700) #18	Homer3 (ENSPEMG00000016382) #19	Ddx49 (ENSPEMG00000009238) #20	Cope (ENSPEMG00000018557) #21	ENSPEMG00000012430 #22	ENSPEMG00000029913 #23	Upf1 (ENSPEMG00000001085) #24	Comp (ENSPEMG00000019103) #25	Crtc1 (ENSPEMG00000005110) #26	Klhl26 (ENSPEMG00000016863) #27	Tmem59l (ENSPEMG00000014170) #28	Crlf1 (ENSPEMG00000010464) #29	Rex1bd (ENSPEMG00000017857) #30	ENSPEMG00000018177 ##31	Fkbp8 (ENSPEMG00000008423) #33	Ell (ENSPEMG00000006782) #34	Isyna1 (ENSPEMG00000010118) #35	Ssbp4 (ENSPEMG00000016738) #36	Lrrc25 (ENSPEMG00000012960) #37	Pgpep1 (ENSPEMG00000015017)
Prairie vole	MODERN SPECIES	164	Sugp1 (ENSMOCG00000014670) #7	Tm6sf2 (ENSMOCG00000018885) #8	Hapln4 (ENSMOCG00000000353) #9	Ncan (ENSMOCG00000020207) #10	Nr2c2ap (ENSMOCG00000003423) #11	Rfxank (ENSMOCG00000021751) #12	ENSMOCG00000008996 #13	Mef2b (ENSMOCG00000000308) #14	Tmem161a (ENSMOCG00000018852) #15	Slc25a42 (ENSMOCG00000012570) #16	Armc6 (ENSMOCG00000014288) #17	Sugp2 (ENSMOCG00000009704) #18	Homer3 (ENSMOCG00000013590) #19	Ddx49 (ENSMOCG00000018690) #20	Cope (ENSMOCG00000014940) #21	ENSMOCG00000004861 #22	ENSMOCG00000000275 #23	Upf1 (ENSMOCG00000005699) #24	Comp (ENSMOCG00000004567) #25	Crtc1 (ENSMOCG00000005553) #26	Klhl26 (ENSMOCG00000017635) #27	Tmem59l (ENSMOCG00000010649) #28	Crlf1 (ENSMOCG00000007746) #29	Rex1bd (ENSMOCG00000014306) #30	Uba52 (ENSMOCG00000015677) #31	Fkbp8 (ENSMOCG00000015712) #33	Ell (ENSMOCG00000013489) #34	ENSMOCG00000013794 #35	Ssbp4 (ENSMOCG00000019818) #36	Lrrc25 (ENSMOCG00000000947) #37	Gdf15 (ENSMOCG00000000065)
Murinae	ANCESTRAL SPECIES	23	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Mus	ANCESTRAL SPECIES	6	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Mus_B	ANCESTRAL SPECIES	6	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Mus_C	ANCESTRAL SPECIES	5	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Steppe mouse	MODERN SPECIES	2734	Sugp1 (ENSMSIG00000032037) #7	Tm6sf2 (ENSMSIG00000032038) #8	Hapln4 (ENSMSIG00000032039) #9	Ncan (ENSMSIG00000032040) #10	Nr2c2ap (ENSMSIG00000032043) #11	Rfxank (ENSMSIG00000032044) #12	Borcs8 (ENSMSIG00000032045) #13	ENSMSIG00000032046 #14	Tmem161a (ENSMSIG00000032047) #15	Slc25a42 (ENSMSIG00000032048) #16	Armc6 (ENSMSIG00000032049) #17	Sugp2 (ENSMSIG00000032050) #18	Homer3 (ENSMSIG00000032051) #19	Ddx49 (ENSMSIG00000032052) #20	Cope (ENSMSIG00000032053) #21	ENSMSIG00000032054 #22	ENSMSIG00000032055 #23	Upf1 (ENSMSIG00000032056) #24	Comp (ENSMSIG00000032057) #25	Crtc1 (ENSMSIG00000032058) #26	Klhl26 (ENSMSIG00000032059) #27	Tmem59l (ENSMSIG00000032060) #28	Crlf1 (ENSMSIG00000032061) #29	ENSMSIG00000032062 #30	ENSMSIG00000032063	ENSMSIG00000032064 #33	Ell (ENSMSIG00000032065) #34	Isyna1 (ENSMSIG00000032066) #35	Ssbp4 (ENSMSIG00000032067) #36	Lrrc25 (ENSMSIG00000032068) #37	Gdf15 (ENSMSIG00000032069)
Rat	MODERN SPECIES	7	Sugp1 (ENSRNOG00000052111) #7	Tm6sf2 (ENSRNOG00000042237) #8	Hapln4 (ENSRNOG00000049949) #9	Ncan (ENSRNOG00000048036) #10	Nr2c2ap (ENSRNOG00000022247) #11	Rfxank (ENSRNOG00000033318) #12	Borcs8 (ENSRNOG00000020427) #13	Mef2b (ENSRNOG00000020400) #14	Tmem161a (ENSRNOG00000020390) #15	Slc25a42 (ENSRNOG00000020345) #16	Armc6 (ENSRNOG00000020280) #17	Sugp2 (ENSRNOG00000020269) #18	Homer3 (ENSRNOG00000020229) #19	Ddx49 (ENSRNOG00000022368) #20	Cope (ENSRNOG00000020178) #21	Cers1 (ENSRNOG00000067124) #22	Gdf1 (ENSRNOG00000070518) #23	Upf1 (ENSRNOG00000020134) #24	Comp (ENSRNOG00000048472) #25	Crtc1 (ENSRNOG00000022421) #26	Klhl26 (ENSRNOG00000020088) #27	Tmem59l (ENSRNOG00000022432) #28	Crlf1 (ENSRNOG00000020030) #29	Rex1bd (ENSRNOG00000019990) #30	Uba52 (ENSRNOG00000019971) #31	Fkbp8 (ENSRNOG00000058359) #33	Ell (ENSRNOG00000019824) #34	Isyna1 (ENSRNOG00000019741) #35	Ssbp4 (ENSRNOG00000019698) #36	Lrrc25 (ENSRNOG00000022565) #37	Gdf15 (ENSRNOG00000019661)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1870	Sugp1 (ENSNGAG00000018965) #7	Tm6sf2 (ENSNGAG00000020192) #8	Hapln4 (ENSNGAG00000014554) #9	Ncan (ENSNGAG00000022597) #10	Nr2c2ap (ENSNGAG00000010770) #11	Rfxank (ENSNGAG00000012986) #12	Borcs8 (ENSNGAG00000023653) #13	Mef2b (ENSNGAG00000010342) #14	Tmem161a (ENSNGAG00000023788) #15	Slc25a42 (ENSNGAG00000023980) #16	Armc6 (ENSNGAG00000021205) #17	Sugp2 (ENSNGAG00000005936) #18	Homer3 (ENSNGAG00000015803) #19	Ddx49 (ENSNGAG00000019673) #20	Cope (ENSNGAG00000022394) #21	ENSNGAG00000022292 #22	ENSNGAG00000022538 #23	Upf1 (ENSNGAG00000024107) #24	Comp (ENSNGAG00000024332) #25	Crtc1 (ENSNGAG00000021475) #26	Klhl26 (ENSNGAG00000010743) #27	Tmem59l (ENSNGAG00000020797) #28	Crlf1 (ENSNGAG00000022169) #29	Rex1bd (ENSNGAG00000013627) #30	Uba52 (ENSNGAG00000010884) #31	Fkbp8 (ENSNGAG00000001505) #33	Ell (ENSNGAG00000004302) #34	Isyna1 (ENSNGAG00000013546) #35	Ssbp4 (ENSNGAG00000023633) #36	Lrrc25 (ENSNGAG00000018288) #37	Gdf15 (ENSNGAG00000019410)
Lesser Egyptian jerboa	MODERN SPECIES	127	Ndufa13 (ENSJJAG00000021903)	Tssk6 (ENSJJAG00000006030)	Gatad2a (ENSJJAG00000014763)	Mau2 (ENSJJAG00000021815)	Sugp1 (ENSJJAG00000013477) #7	Tm6sf2 (ENSJJAG00000023997) #8	Hapln4 (ENSJJAG00000016332) #9	Ncan (ENSJJAG00000018295) #10	Nr2c2ap (ENSJJAG00000023882) #11	Mef2b (ENSJJAG00000009955) #14	Slc25a42 (ENSJJAG00000018672) #16	Armc6 (ENSJJAG00000014237) #17	Sugp2 (ENSJJAG00000005264) #18	Homer3 (ENSJJAG00000014551) #19	Cope (ENSJJAG00000017037) #21	ENSJJAG00000016264 #22	ENSJJAG00000000262 #23	Upf1 (ENSJJAG00000023151) #24	Comp (ENSJJAG00000011685) #25	Crtc1 (ENSJJAG00000014073) #26	Klhl26 (ENSJJAG00000015486) #27	Tmem59l (ENSJJAG00000015054) #28	Crlf1 (ENSJJAG00000023822) #29	Rex1bd (ENSJJAG00000013226) #30	ENSJJAG00000005654 ##31	ENSJJAG00000016159	Fkbp8 (ENSJJAG00000012734) #33	Ell (ENSJJAG00000015761) #34	ENSJJAG00000018151	Isyna1 (ENSJJAG00000023621) #35	Ssbp4 (ENSJJAG00000022395) #36
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Hystricomorpha	ANCESTRAL SPECIES	47	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000153593.d ##31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000039617 #18	ENSHGLG00000042474 #7	TM6SF2 (ENSHGLG00000004113) #8	HAPLN4 (ENSHGLG00000003896) #9	NCAN (ENSHGLG00000034381) #10	NR2C2AP (ENSHGLG00000033726) #11	RFXANK (ENSHGLG00000003396) #12	MEF2BNB (ENSHGLG00000047513) #13	ENSHGLG00000003123 #14	TMEM161A (ENSHGLG00000009517) #15	SLC25A42 (ENSHGLG00000008826) #16	ARMC6 (ENSHGLG00000008147) #17	HOMER3 (ENSHGLG00000006851) #19	ENSHGLG00000006789 #20	COPE (ENSHGLG00000006648) #21	CERS1 (ENSHGLG00000013716) #22	GDF1 (ENSHGLG00000042377) #23	UPF1 (ENSHGLG00000010900) #24	COMP (ENSHGLG00000009575) #25	ENSHGLG00000041161 #27	TMEM59L (ENSHGLG00000035873) #28	CRLF1 (ENSHGLG00000006747) #29	REX1BD (ENSHGLG00000018788) #30	UBA52 (ENSHGLG00000019381) ##31	KXD1 (ENSHGLG00000044958)	ENSHGLG00000012226 #33	ENSHGLG00000047901 #34	ELL (ENSHGLG00000011254) #34	ISYNA1 (ENSHGLG00000010290) #35	ENSHGLG00000046442	ENSHGLG00000039382 #36
Hystricomorpha_a	ANCESTRAL SPECIES	55	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872
Guinea pig	MODERN SPECIES	72	MAU2 (ENSCPOG00000003755)	SUGP1 (ENSCPOG00000007797) #7	TM6SF2 (ENSCPOG00000022916) #8	HAPLN4 (ENSCPOG00000023683) #9	NR2C2AP (ENSCPOG00000032927) #11	RFXANK (ENSCPOG00000003121) #12	BORCS8 (ENSCPOG00000036178) #13	MEF2B (ENSCPOG00000032781) #14	TMEM161A (ENSCPOG00000013640) #15	SLC25A42 (ENSCPOG00000013086) #16	ARMC6 (ENSCPOG00000006374) #17	SUGP2 (ENSCPOG00000006372) #18	HOMER3 (ENSCPOG00000004565) #19	DDX49 (ENSCPOG00000013626) #20	COPE (ENSCPOG00000013624) #21	CERS1 (ENSCPOG00000033783) #22	GDF1 (ENSCPOG00000031791) #23	UPF1 (ENSCPOG00000025463) #24	COMP (ENSCPOG00000025029) #25	CRTC1 (ENSCPOG00000034343) #26	KLHL26 (ENSCPOG00000020718) #27	TMEM59L (ENSCPOG00000021490) #28	CRLF1 (ENSCPOG00000021160) #29	UBA52 (ENSCPOG00000025880) #31	FKBP8 (ENSCPOG00000026709) #33	ELL (ENSCPOG00000022431) #34	ISYNA1 (ENSCPOG00000027332) #35	ENSCPOG00000025088 ##36	ENSCPOG00000031969 #37	GDF15 (ENSCPOG00000032675)	PGPEP1 (ENSCPOG00000031925)
Hystricomorpha_b	ANCESTRAL SPECIES	66	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872
Long-tailed chinchilla	MODERN SPECIES	231	SUGP1 (ENSCLAG00000003512) #7	TM6SF2 (ENSCLAG00000003633) #8	HAPLN4 (ENSCLAG00000003955) #9	NCAN (ENSCLAG00000004140) #10	NR2C2AP (ENSCLAG00000004378) #11	RFXANK (ENSCLAG00000004632) #12	BORCS8 (ENSCLAG00000004959) #13	MEF2B (ENSCLAG00000007377) #14	TMEM161A (ENSCLAG00000007578) #15	SLC25A42 (ENSCLAG00000008004) #16	ARMC6 (ENSCLAG00000008215) #17	SUGP2 (ENSCLAG00000011375) #18	HOMER3 (ENSCLAG00000011599) #19	DDX49 (ENSCLAG00000012844) #20	COPE (ENSCLAG00000003621) #21	CERS1 (ENSCLAG00000003897) #22	UPF1 (ENSCLAG00000004037) #24	COMP (ENSCLAG00000005109) #25	CRTC1 (ENSCLAG00000005682) #26	KLHL26 (ENSCLAG00000006029) #27	TMEM59L (ENSCLAG00000006357) #28	CRLF1 (ENSCLAG00000006697) #29	ENSCLAG00000007191 #30	UBA52 (ENSCLAG00000005686) #31	FKBP8 (ENSCLAG00000005953) #33	ELL (ENSCLAG00000007609) #34	ISYNA1 (ENSCLAG00000008992) #35	SSBP4 (ENSCLAG00000013009) #36	ENSCLAG00000009618 #37	GDF15 (ENSCLAG00000010045)	PGPEP1 (ENSCLAG00000010542)
Degu	MODERN SPECIES	323	SUGP1 (ENSODEG00000011538) #7	TM6SF2 (ENSODEG00000010936) #8	HAPLN4 (ENSODEG00000011689) #9	NCAN (ENSODEG00000011699) #10	NR2C2AP (ENSODEG00000011486) #11	RFXANK (ENSODEG00000013006) #12	BORCS8 (ENSODEG00000013003) #13	MEF2B (ENSODEG00000012357) #14	TMEM161A (ENSODEG00000012343) #15	SLC25A42 (ENSODEG00000012168) #16	ARMC6 (ENSODEG00000012613) #17	SUGP2 (ENSODEG00000012058) #18	HOMER3 (ENSODEG00000014870) #19	DDX49 (ENSODEG00000011203) #20	COPE (ENSODEG00000011547) #21	CERS1 (ENSODEG00000011214) #22	GDF1 (ENSODEG00000011857) #23	UPF1 (ENSODEG00000012426) #24	COMP (ENSODEG00000015412) #25	CRTC1 (ENSODEG00000011739) #26	KLHL26 (ENSODEG00000012544) #27	TMEM59L (ENSODEG00000012052) #28	CRLF1 (ENSODEG00000012883) #29	REX1BD (ENSODEG00000013625) #30	ENSODEG00000012337 #31	ENSODEG00000013486 #33	ELL (ENSODEG00000012821) #34	ISYNA1 (ENSODEG00000011920) #35	SSBP4 (ENSODEG00000012832) #36	PGPEP1 (ENSODEG00000012364)	ENSODEG00000011712
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.k #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Marmotini	ANCESTRAL SPECIES	12	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000156705.k #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872
Alpin marmot	MODERN SPECIES	24	SUGP1 (ENSMMMG00000003416) #7	TM6SF2 (ENSMMMG00000003397) #8	HAPLN4 (ENSMMMG00000003386) #9	NCAN (ENSMMMG00000003066) #10	NR2C2AP (ENSMMMG00000003044) #11	RFXANK (ENSMMMG00000003029) #12	BORCS8 (ENSMMMG00000003015) #13	MEF2B (ENSMMMG00000002982) #14	TMEM161A (ENSMMMG00000002937) #15	SLC25A42 (ENSMMMG00000002914) #16	ARMC6 (ENSMMMG00000002877) #17	SUGP2 (ENSMMMG00000002743) #18	HOMER3 (ENSMMMG00000002691) #19	DDX49 (ENSMMMG00000002658) #20	COPE (ENSMMMG00000002634) #21	CERS1 (ENSMMMG00000002619) #22	UPF1 (ENSMMMG00000001874) #24	COMP (ENSMMMG00000001807) #25	CRTC1 (ENSMMMG00000001771) #26	ENSMMMG00000001749 #27	CRLF1 (ENSMMMG00000001730) #29	REX1BD (ENSMMMG00000001721) #30	ENSMMMG00000001669 ##31	FKBP8 (ENSMMMG00000001633) #33	ELL (ENSMMMG00000001572) #34	ISYNA1 (ENSMMMG00000001488) #35	SSBP4 (ENSMMMG00000001427) #36	LRRC25 (ENSMMMG00000001420) #37	PGPEP1 (ENSMMMG00000001398)	LSM4 (ENSMMMG00000001362)	ENSMMMG00000001343
Marmotini_b	ANCESTRAL SPECIES	12	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00940000156705.k #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872
Arctic ground squirrel	MODERN SPECIES	73	SUGP1 (ENSUPAG00010018104) #7	TM6SF2 (ENSUPAG00010018116) #8	HAPLN4 (ENSUPAG00010018121) #9	NCAN (ENSUPAG00010018127) #10	NR2C2AP (ENSUPAG00010018146) #11	RFXANK (ENSUPAG00010018152) #12	BORCS8 (ENSUPAG00010018165) #13	MEF2B (ENSUPAG00010018172) #14	TMEM161A (ENSUPAG00010018179) #15	SLC25A42 (ENSUPAG00010018191) #16	ARMC6 (ENSUPAG00010018208) #17	SUGP2 (ENSUPAG00010018216) #18	HOMER3 (ENSUPAG00010018230) #19	DDX49 (ENSUPAG00010018246) #20	COPE (ENSUPAG00010018276) #21	CERS1 (ENSUPAG00010018294) #22	GDF1 (ENSUPAG00010018300) #23	UPF1 (ENSUPAG00010018302) #24	COMP (ENSUPAG00010018331) #25	CRTC1 (ENSUPAG00010018349) #26	KLHL26 (ENSUPAG00010018384) #27	TMEM59L (ENSUPAG00010018396) #28	CRLF1 (ENSUPAG00010018403) #29	REX1BD (ENSUPAG00010018419) #30	UBA52 (ENSUPAG00010018444) #31	FKBP8 (ENSUPAG00010018474) #33	ELL (ENSUPAG00010018509) #34	ISYNA1 (ENSUPAG00010018527) #35	SSBP4 (ENSUPAG00010018547) #36	LRRC25 (ENSUPAG00010018637) #37	GDF15 (ENSUPAG00010018644)
Squirrel	MODERN SPECIES	196	SUGP1 (ENSSTOG00000001020) #7	TM6SF2 (ENSSTOG00000025054) #8	HAPLN4 (ENSSTOG00000007240) #9	NCAN (ENSSTOG00000001012) #10	NR2C2AP (ENSSTOG00000001006) #11	RFXANK (ENSSTOG00000024080) #12	BORCS8 (ENSSTOG00000025422) #13	MEF2B (ENSSTOG00000005895) #14	TMEM161A (ENSSTOG00000005867) #15	SLC25A42 (ENSSTOG00000022047) #16	ARMC6 (ENSSTOG00000012997) #17	SUGP2 (ENSSTOG00000026887) #18	HOMER3 (ENSSTOG00000029095) #19	DDX49 (ENSSTOG00000006749) #20	COPE (ENSSTOG00000006736) #21	CERS1 (ENSSTOG00000029010) #22	GDF1 (ENSSTOG00000020887) #23	UPF1 (ENSSTOG00000009196) #24	COMP (ENSSTOG00000026172) #25	CRTC1 (ENSSTOG00000022992) #26	KLHL26 (ENSSTOG00000026260) #27	TMEM59L (ENSSTOG00000013508) #28	CRLF1 (ENSSTOG00000004708) #29	REX1BD (ENSSTOG00000004692) #30	UBA52 (ENSSTOG00000004678) #31	FKBP8 (ENSSTOG00000014068) #33	ELL (ENSSTOG00000004646) #34	ISYNA1 (ENSSTOG00000022613) #35	SSBP4 (ENSSTOG00000029026) #36	LRRC25 (ENSSTOG00000013485) #37	GDF15 (ENSSTOG00000022430)
Eurasian red squirrel	MODERN SPECIES	7	TM6SF2 (ENSSVLG00005017792) #8	HAPLN4 (ENSSVLG00005017756) #9	ENSSVLG00005017692	NCAN (ENSSVLG00005017503) #10	NR2C2AP (ENSSVLG00005017403) #11	RFXANK (ENSSVLG00005017362) #12	BORCS8 (ENSSVLG00005017305) #13	MEF2B (ENSSVLG00005017215) #14	TMEM161A (ENSSVLG00005017057) #15	SLC25A42 (ENSSVLG00005017005) #16	ARMC6 (ENSSVLG00005016951) #17	SUGP2 (ENSSVLG00005016823) #18	HOMER3 (ENSSVLG00005016701) #19	DDX49 (ENSSVLG00005016654) #20	COPE (ENSSVLG00005016567) #21	CERS1 (ENSSVLG00005016494) #22	UPF1 (ENSSVLG00005016436) #24	COMP (ENSSVLG00005016356) #25	CRTC1 (ENSSVLG00005016088) #26	KLHL26 (ENSSVLG00005015974) #27	TMEM59L (ENSSVLG00005015929) #28	CRLF1 (ENSSVLG00005015862) #29	REX1BD (ENSSVLG00005015816) #30	UBA52 (ENSSVLG00005025643) #31	KXD1 (ENSSVLG00005025639)	FKBP8 (ENSSVLG00005025627) #33	ELL (ENSSVLG00005025617) #34	ISYNA1 (ENSSVLG00005025602) #35	SSBP4 (ENSSVLG00005025573) #36	LRRC25 (ENSSVLG00005025559) #37	GDF15 (ENSSVLG00005025552)
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Artiodactyla	ANCESTRAL SPECIES	22	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Suina	ANCESTRAL SPECIES	39	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Pig	MODERN SPECIES	10	TM6SF2 (ENSSSCG00000059192) #8	HAPLN4 (ENSSSCG00000034887) #9	NCAN (ENSSSCG00000032131) #10	NR2C2AP (ENSSSCG00000023658) #11	RFXANK (ENSSSCG00000036310) #12	BORCS8 (ENSSSCG00000044084) #13	MEF2B (ENSSSCG00000030351) #14	TMEM161A (ENSSSCG00000033168) #15	SLC25A42 (ENSSSCG00000013927) #16	ENSSSCG00000044637	ARMC6 (ENSSSCG00000049430) #17	SUGP2 (ENSSSCG00000025839) #18	HOMER3 (ENSSSCG00000013919) #19	DDX49 (ENSSSCG00000025329) #20	COPE (ENSSSCG00000027840) #21	CERS1 (ENSSSCG00000013928) #22	UPF1 (ENSSSCG00000039301) #24	COMP (ENSSSCG00000013916) #25	CRTC1 (ENSSSCG00000013915) #26	KLHL26 (ENSSSCG00000013913) #27	TMEM59L (ENSSSCG00000013911) #28	CRLF1 (ENSSSCG00000013909) #29	REX1BD (ENSSSCG00000040666) #30	UBA52 (ENSSSCG00000053292) #31	KXD1 (ENSSSCG00000013906)	FKBP8 (ENSSSCG00000013905) #33	ELL (ENSSSCG00000040181) #34	ENSSSCG00000043019	ISYNA1 (ENSSSCG00000040524) #35	SSBP4 (ENSSSCG00000025955) #36	LRRC25 (ENSSSCG00000036963) #37
Chacoan peccary	MODERN SPECIES	769	SUGP1 (ENSCWAG00000008452) #7	TM6SF2 (ENSCWAG00000008344) #8	HAPLN4 (ENSCWAG00000008277) #9	NCAN (ENSCWAG00000007920) #10	NR2C2AP (ENSCWAG00000007805) #11	RFXANK (ENSCWAG00000020046) #12	BORCS8 (ENSCWAG00000019997) #13	MEF2B (ENSCWAG00000019951) #14	TMEM161A (ENSCWAG00000019820) #15	SLC25A42 (ENSCWAG00000019779) #16	ARMC6 (ENSCWAG00000019757) #17	SUGP2 (ENSCWAG00000019735) #18	HOMER3 (ENSCWAG00000019671) #19	DDX49 (ENSCWAG00000019644) #20	COPE (ENSCWAG00000019578) #21	CERS1 (ENSCWAG00000019515) #22	GDF1 (ENSCWAG00000019490) #23	UPF1 (ENSCWAG00000019458) #24	COMP (ENSCWAG00000019235) #25	CRTC1 (ENSCWAG00000019030) #26	KLHL26 (ENSCWAG00000018976) #27	TMEM59L (ENSCWAG00000018953) #28	CRLF1 (ENSCWAG00000018917) #29	ENSCWAG00000018899	REX1BD (ENSCWAG00000018868) #30	UBA52 (ENSCWAG00000018816) #31	KXD1 (ENSCWAG00000018851)	FKBP8 (ENSCWAG00000018780) #33	ELL (ENSCWAG00000018746) #34	ISYNA1 (ENSCWAG00000018620) #35	SSBP4 (ENSCWAG00000018544) #36
Artiodactyla_a	ANCESTRAL SPECIES	23	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Camelidae	ANCESTRAL SPECIES	64	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00530000064192.r	ENSGT00940000153593.c.a #31	ENSGT00530000064192.q	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Arabian camel	MODERN SPECIES	14	SUGP1 (ENSCDRG00005011946) #7	TM6SF2 (ENSCDRG00005012037) #8	HAPLN4 (ENSCDRG00005012163) #9	NCAN (ENSCDRG00005012212) #10	NR2C2AP (ENSCDRG00005012299) #11	RFXANK (ENSCDRG00005012616) #12	ENSCDRG00005012691 #13	MEF2B (ENSCDRG00005012755) #14	TMEM161A (ENSCDRG00005012779) #15	SLC25A42 (ENSCDRG00005012927) #16	ARMC6 (ENSCDRG00005012979) #17	SUGP2 (ENSCDRG00005013031) #18	HOMER3 (ENSCDRG00005013258) #19	DDX49 (ENSCDRG00005013373) #20	COPE (ENSCDRG00005013441) #21	CERS1 (ENSCDRG00005013600) #22	UPF1 (ENSCDRG00005008931) #24	COMP (ENSCDRG00005009080) #25	CRTC1 (ENSCDRG00005009334) #26	KLHL26 (ENSCDRG00005009944) #27	TMEM59L (ENSCDRG00005009996) #28	CRLF1 (ENSCDRG00005010053) #29	REX1BD (ENSCDRG00005010167) #30	UBA52 (ENSCDRG00005010272) #31	ENSCDRG00005010351	FKBP8 (ENSCDRG00005010447) #33	ELL (ENSCDRG00005010516) #34	SSBP4 (ENSCDRG00005010596) #36	ISYNA1 (ENSCDRG00005010835) #35	LRRC25 (ENSCDRG00005011039) #37	GDF15 (ENSCDRG00005011075)
Artiodactyla_b	ANCESTRAL SPECIES	23	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Cetacea	ANCESTRAL SPECIES	1	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000153593.c.a #31	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.b ##31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.b ##31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Narwhal	MODERN SPECIES	298	SUGP1 (ENSMMNG00015006270) #7	TM6SF2 (ENSMMNG00015006300) #8	HAPLN4 (ENSMMNG00015006325) #9	NCAN (ENSMMNG00015006441) #10	ENSMMNG00015006667 #11	RFXANK (ENSMMNG00015006700) #12	BORCS8 (ENSMMNG00015006726) #13	MEF2B (ENSMMNG00015006749) #14	TMEM161A (ENSMMNG00015006783) #15	SLC25A42 (ENSMMNG00015006831) #16	ARMC6 (ENSMMNG00015006856) #17	SUGP2 (ENSMMNG00015006879) #18	HOMER3 (ENSMMNG00015006915) #19	DDX49 (ENSMMNG00015006955) #20	COPE (ENSMMNG00015007007) #21	CERS1 (ENSMMNG00015007051) #22	GDF1 (ENSMMNG00015007086) #23	UPF1 (ENSMMNG00015007103) #24	COMP (ENSMMNG00015007143) #25	CRTC1 (ENSMMNG00015007220) #26	KLHL26 (ENSMMNG00015007349) #27	TMEM59L (ENSMMNG00015007375) #28	CRLF1 (ENSMMNG00015007421) #29	REX1BD (ENSMMNG00015007469) #30	ENSMMNG00015007512 ##31	KXD1 (ENSMMNG00015007547)	FKBP8 (ENSMMNG00015007578) #33	ELL (ENSMMNG00015007605) #34	ISYNA1 (ENSMMNG00015007654) #35	SSBP4 (ENSMMNG00015007789) #36	LRRC25 (ENSMMNG00015007891) #37
Beluga whale	MODERN SPECIES	27	SUGP1 (ENSDLEG00000009158) #7	TM6SF2 (ENSDLEG00000009148) #8	HAPLN4 (ENSDLEG00000006247) #9	NCAN (ENSDLEG00000006241) #10	ENSDLEG00000006238 #11	RFXANK (ENSDLEG00000006230) #12	ENSDLEG00000006226	MEF2B (ENSDLEG00000006219) #14	TMEM161A (ENSDLEG00000006213) #15	SLC25A42 (ENSDLEG00000006206) #16	ARMC6 (ENSDLEG00000006199) #17	SUGP2 (ENSDLEG00000006190) #18	HOMER3 (ENSDLEG00000006185) #19	DDX49 (ENSDLEG00000006176) #20	COPE (ENSDLEG00000006169) #21	CERS1 (ENSDLEG00000006163) #22	GDF1 (ENSDLEG00000006157) #23	UPF1 (ENSDLEG00000006145) #24	COMP (ENSDLEG00000006134) #25	CRTC1 (ENSDLEG00000006096) #26	KLHL26 (ENSDLEG00000006086) #27	TMEM59L (ENSDLEG00000006084) #28	CRLF1 (ENSDLEG00000006067) #29	ENSDLEG00000006057	REX1BD (ENSDLEG00000006050) #30	UBA52 (ENSDLEG00000006044) ##31	KXD1 (ENSDLEG00000006030)	FKBP8 (ENSDLEG00000006024) #33	ELL (ENSDLEG00000006014) #34	ISYNA1 (ENSDLEG00000005989) #35	SSBP4 (ENSDLEG00000005979) #36
Vaquita	MODERN SPECIES	14	MAU2 (ENSPSNG00000001203)	SUGP1 (ENSPSNG00000001311) #7	TM6SF2 (ENSPSNG00000001343) #8	HAPLN4 (ENSPSNG00000001367) #9	NCAN (ENSPSNG00000001532) #10	NR2C2AP (ENSPSNG00000001752) #11	RFXANK (ENSPSNG00000001779) #12	MEF2B (ENSPSNG00000001853) #14	TMEM161A (ENSPSNG00000001898) #15	SLC25A42 (ENSPSNG00000001921) #16	ARMC6 (ENSPSNG00000001939) #17	SUGP2 (ENSPSNG00000001966) #18	HOMER3 (ENSPSNG00000002016) #19	DDX49 (ENSPSNG00000002062) #20	COPE (ENSPSNG00000002124) #21	CERS1 (ENSPSNG00000002156) #22	GDF1 (ENSPSNG00000002175) #23	UPF1 (ENSPSNG00000002213) #24	COMP (ENSPSNG00000002298) #25	CRTC1 (ENSPSNG00000002462) #26	KLHL26 (ENSPSNG00000002575) #27	TMEM59L (ENSPSNG00000002614) #28	CRLF1 (ENSPSNG00000002653) #29	UBA52 (ENSPSNG00000002675) #31	REX1BD (ENSPSNG00000002705) #30	ENSPSNG00000002729	KXD1 (ENSPSNG00000002749)	FKBP8 (ENSPSNG00000002784) #33	ELL (ENSPSNG00000002839) #34	ISYNA1 (ENSPSNG00000002918) #35	SSBP4 (ENSPSNG00000002994) #36
Sperm whale	MODERN SPECIES	86												HOMER3 (ENSPCTG00005019165) #19	DDX49 (ENSPCTG00005019293) #20	COPE (ENSPCTG00005019415) #21	ENSPCTG00005019508 #20	CERS1 (ENSPCTG00005019658) #22	GDF1 (ENSPCTG00005019697) #23	UPF1 (ENSPCTG00005019734) #24
Blue whale	MODERN SPECIES	14	SUGP1 (ENSBMSG00010002719) #7	TM6SF2 (ENSBMSG00010002725) #8	HAPLN4 (ENSBMSG00010002737) #9	NCAN (ENSBMSG00010002745) #10	NR2C2AP (ENSBMSG00010002762) #11	RFXANK (ENSBMSG00010002771) #12	ENSBMSG00010002783	MEF2B (ENSBMSG00010003849) #14	TMEM161A (ENSBMSG00010003877) #15	SLC25A42 (ENSBMSG00010003900) #16	ARMC6 (ENSBMSG00010003914) #17	SUGP2 (ENSBMSG00010003931) #18	HOMER3 (ENSBMSG00010003958) #19	DDX49 (ENSBMSG00010004039) #20	COPE (ENSBMSG00010004064) #21	CERS1 (ENSBMSG00010004105) #22	GDF1 (ENSBMSG00010004120) #23	UPF1 (ENSBMSG00010004141) #24	COMP (ENSBMSG00010004199) #25	CRTC1 (ENSBMSG00010004257) #26	KLHL26 (ENSBMSG00010004285) #27	TMEM59L (ENSBMSG00010004290) #28	CRLF1 (ENSBMSG00010004297) #29	REX1BD (ENSBMSG00010004317) #30	UBA52 (ENSBMSG00010004333) #31	KXD1 (ENSBMSG00010004344)	FKBP8 (ENSBMSG00010004359) #33	ELL (ENSBMSG00010004392) #34	ISYNA1 (ENSBMSG00010004428) #35	SSBP4 (ENSBMSG00010004477) #36	LRRC25 (ENSBMSG00010004508) #37
Pecora	ANCESTRAL SPECIES		ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Percora_a	ANCESTRAL SPECIES		ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Bovidae	ANCESTRAL SPECIES		ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.q.b #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Caprinae	ANCESTRAL SPECIES	32	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.q.b #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Rambouillet Sheep	MODERN SPECIES	21	GATAD2A (ENSOARG00020019767)	MAU2 (ENSOARG00020019838)	SUGP1 (ENSOARG00020019993) #7	TM6SF2 (ENSOARG00020020089) #8	HAPLN4 (ENSOARG00020020166) #9	NR2C2AP (ENSOARG00020020240) #11	RFXANK (ENSOARG00020020308) #12	BORCS8 (ENSOARG00020020354) #13	MEF2B (ENSOARG00020020398) #14	TMEM161A (ENSOARG00020020857) #15	SLC25A42 (ENSOARG00020020909) #16	ARMC6 (ENSOARG00020020947) #17	SUGP2 (ENSOARG00020021040) #18	ENSOARG00020021129 #19	DDX49 (ENSOARG00020021548) #20	CERS1 (ENSOARG00020021615) #22	UPF1 (ENSOARG00020003352) #24	COMP (ENSOARG00020003569) #25	CRTC1 (ENSOARG00020003966) #26	KLHL26 (ENSOARG00020004115) #27	TMEM59L (ENSOARG00020004177) #28	CRLF1 (ENSOARG00020004211) #29	REX1BD (ENSOARG00020004269) #30	UBA52 (ENSOARG00020004308) #31	KXD1 (ENSOARG00020004349)	FKBP8 (ENSOARG00020004369) #33	ELL (ENSOARG00020004406) #34	ISYNA1 (ENSOARG00020004475) #35	SSBP4 (ENSOARG00020004580) #36	LRRC25 (ENSOARG00020004617) #37	GDF15 (ENSOARG00020004638)
Goat	MODERN SPECIES	26	SUGP1 (ENSCHIG00000024169) #7	TM6SF2 (ENSCHIG00000009497) #8	HAPLN4 (ENSCHIG00000017398) #9	NCAN (ENSCHIG00000023523) #10	NR2C2AP (ENSCHIG00000026754) #11	RFXANK (ENSCHIG00000009697) #12	BORCS8 (ENSCHIG00000023514) #13	MEF2B (ENSCHIG00000009022) #14	TMEM161A (ENSCHIG00000015703) #15	SLC25A42 (ENSCHIG00000017224) #16	ARMC6 (ENSCHIG00000022745) #17	SUGP2 (ENSCHIG00000000571) #18	HOMER3 (ENSCHIG00000013425) #19	DDX49 (ENSCHIG00000019910) #20	COPE (ENSCHIG00000019197) #21	CERS1 (ENSCHIG00000021209) #22	GDF1 (ENSCHIG00000026655) #23	UPF1 (ENSCHIG00000011018) #24	COMP (ENSCHIG00000015152) #25	CRTC1 (ENSCHIG00000020510) #26	KLHL26 (ENSCHIG00000009198) #27	TMEM59L (ENSCHIG00000001269) #28	CRLF1 (ENSCHIG00000014402) #29	REX1BD (ENSCHIG00000025942) #30	ENSCHIG00000024401 ##31	KXD1 (ENSCHIG00000027154)	FKBP8 (ENSCHIG00000013446) #33	ELL (ENSCHIG00000018044) #34	ISYNA1 (ENSCHIG00000023057) #35	SSBP4 (ENSCHIG00000021686) #36	LRRC25 (ENSCHIG00000023973) #37
Bovinae	ANCESTRAL SPECIES	34	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705.q.b #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Bos	ANCESTRAL SPECIES	34	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192.s	ENSGT00940000156705.q.b #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Bos_b	ANCESTRAL SPECIES	36	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.b ##31	ENSGT00530000064192.s	ENSGT00940000156705.q.b #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Cow	MODERN SPECIES	26	SUGP1 (ENSBTAG00000006116) #7	TM6SF2 (ENSBTAG00000016042) #8	HAPLN4 (ENSBTAG00000001765) #9	NCAN (ENSBTAG00000001764) #10	NR2C2AP (ENSBTAG00000001763) #11	RFXANK (ENSBTAG00000001762) #12	BORCS8 (ENSBTAG00000025817) #13	MEF2B (ENSBTAG00000001818) #14	TMEM161A (ENSBTAG00000001817) #15	SLC25A42 (ENSBTAG00000001816) #16	ARMC6 (ENSBTAG00000013291) #17	SUGP2 (ENSBTAG00000013288) #18	HOMER3 (ENSBTAG00000000813) #19	DDX49 (ENSBTAG00000000811) #20	COPE (ENSBTAG00000000810) #21	CERS1 (ENSBTAG00000037729) #22	GDF1 (ENSBTAG00000020923) #23	UPF1 (ENSBTAG00000020922) #24	COMP (ENSBTAG00000004630) #25	CRTC1 (ENSBTAG00000010379) #26	KLHL26 (ENSBTAG00000014114) #27	TMEM59L (ENSBTAG00000007698) #28	CRLF1 (ENSBTAG00000007741) #29	REX1BD (ENSBTAG00000007739) #30	UBA52 (ENSBTAG00000007737) ##31	KXD1 (ENSBTAG00000010545)	FKBP8 (ENSBTAG00000016264) #33	ELL (ENSBTAG00000003587) #34	ISYNA1 (ENSBTAG00000017482) #35	SSBP4 (ENSBTAG00000003947) #36	LRRC25 (ENSBTAG00000017273) #37
Bos_a	ANCESTRAL SPECIES	29	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192.s	ENSGT00940000156705.q.b #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37	ENSGT00940000161872
Domestic yak	MODERN SPECIES	27	TM6SF2 (ENSBGRG00000001786) #8	HAPLN4 (ENSBGRG00000001768) #9	NCAN (ENSBGRG00000001688) #10	NR2C2AP (ENSBGRG00000001646) #11	RFXANK (ENSBGRG00000001549) #12	ENSBGRG00000001503 #13	MEF2B (ENSBGRG00000001435) #14	TMEM161A (ENSBGRG00000001322) #15	SLC25A42 (ENSBGRG00000001293) #16	ARMC6 (ENSBGRG00000001271) #17	SUGP2 (ENSBGRG00000001227) #18	ENSBGRG00000001213 #19	HOMER3 (ENSBGRG00000001163) #19	DDX49 (ENSBGRG00000001122) #20	COPE (ENSBGRG00000001045) #21	CERS1 (ENSBGRG00000000977) #22	UPF1 (ENSBGRG00000000885) #24	COMP (ENSBGRG00000000772) #25	CRTC1 (ENSBGRG00000000542) #26	KLHL26 (ENSBGRG00000000466) #27	TMEM59L (ENSBGRG00000000427) #28	CRLF1 (ENSBGRG00000000399) #29	ENSBGRG00000026408 #30	ENSBGRG00000026400 ##31	ENSBGRG00000026397	ENSBGRG00000026382 #33	ENSBGRG00000026374	ELL (ENSBGRG00000026367) #34	ISYNA1 (ENSBGRG00000026356) #35	SSBP4 (ENSBGRG00000026307) #36	LRRC25 (ENSBGRG00000026281) #37
Wild yak	MODERN SPECIES	984	SUGP1 (ENSBMUG00000014735) #7	TM6SF2 (ENSBMUG00000014742) #8	ENSBMUG00000014766 #9	NCAN (ENSBMUG00000014781) #10	NR2C2AP (ENSBMUG00000014819) #11	RFXANK (ENSBMUG00000014864) #12	BORCS8 (ENSBMUG00000014902) #13	MEF2B (ENSBMUG00000014926) #14	TMEM161A (ENSBMUG00000014965) #15	SLC25A42 (ENSBMUG00000014988) #16	ARMC6 (ENSBMUG00000015012) #17	SUGP2 (ENSBMUG00000015048) #18	HOMER3 (ENSBMUG00000015101) #19	DDX49 (ENSBMUG00000015132) #20	COPE (ENSBMUG00000015145) #21	CERS1 (ENSBMUG00000015159) #22	UPF1 (ENSBMUG00000015177) #24	COMP (ENSBMUG00000015225) #25	CRTC1 (ENSBMUG00000015292) #26	KLHL26 (ENSBMUG00000015350) #27	TMEM59L (ENSBMUG00000015381) #28	CRLF1 (ENSBMUG00000015427) #29	REX1BD (ENSBMUG00000015467) #30	UBA52 (ENSBMUG00000015499) #31	KXD1 (ENSBMUG00000015517)	ENSBMUG00000015586 #33	ELL (ENSBMUG00000015621) #34
American bison	MODERN SPECIES	3165	SUGP1 (ENSBBBG00000015892) #7	TM6SF2 (ENSBBBG00000015869) #8	HAPLN4 (ENSBBBG00000015855) #9	NCAN (ENSBBBG00000003940) #10	NR2C2AP (ENSBBBG00000003931) #11	RFXANK (ENSBBBG00000015745) #12	ENSBBBG00000015701 #13	MEF2B (ENSBBBG00000007138) #14	TMEM161A (ENSBBBG00000007455) #15	ARMC6 (ENSBBBG00000015629) #17	SUGP2 (ENSBBBG00000003426) #18	ENSBBBG00000003456 #19	ENSBBBG00000003467 #19	DDX49 (ENSBBBG00000015616) #20	COPE (ENSBBBG00000015595) #21	CERS1 (ENSBBBG00000015545) #22	UPF1 (ENSBBBG00000003867) #24	COMP (ENSBBBG00000002699) #25	CRTC1 (ENSBBBG00000015471) #26	ENSBBBG00000015461 #27	TMEM59L (ENSBBBG00000015452) #28	CRLF1 (ENSBBBG00000003846) #29	ENSBBBG00000015406 #30	ENSBBBG00000002734 ##31	KXD1 (ENSBBBG00000015390)	ENSBBBG00000015360 #33	ELL (ENSBBBG00000015350) #34	ISYNA1 (ENSBBBG00000015329) #35	ENSBBBG00000015324 ##36	LRRC25 (ENSBBBG00000015319) #37	GDF15 (ENSBBBG00000001254)
Siberian musk deer	MODERN SPECIES	1231	SUGP1 (ENSMMSG00000017541) #7	TM6SF2 (ENSMMSG00000017487) #8	HAPLN4 (ENSMMSG00000017463) #9	NCAN (ENSMMSG00000017015) #10	NR2C2AP (ENSMMSG00000016963) #11	RFXANK (ENSMMSG00000016859) #12	BORCS8 (ENSMMSG00000016823) #13	MEF2B (ENSMMSG00000016211) #14	TMEM161A (ENSMMSG00000016113) #15	SLC25A42 (ENSMMSG00000022673) #16	ARMC6 (ENSMMSG00000022659) #17	SUGP2 (ENSMMSG00000022643) #18	HOMER3 (ENSMMSG00000022598) #19	DDX49 (ENSMMSG00000022565) #20	COPE (ENSMMSG00000022538) #21	CERS1 (ENSMMSG00000022516) #22	GDF1 (ENSMMSG00000022528) #23	UPF1 (ENSMMSG00000022501) #24	COMP (ENSMMSG00000022327) #25	CRTC1 (ENSMMSG00000022161) #26	KLHL26 (ENSMMSG00000022113) #27	TMEM59L (ENSMMSG00000022096) #28	CRLF1 (ENSMMSG00000022062) #29	REX1BD (ENSMMSG00000022031) #30	ENSMMSG00000022005 ##31	KXD1 (ENSMMSG00000021990)	FKBP8 (ENSMMSG00000021969) #33	ELL (ENSMMSG00000021935) #34	ISYNA1 (ENSMMSG00000021864) #35	SSBP4 (ENSMMSG00000021774) #36	LRRC25 (ENSMMSG00000021754) #37
Yarkand deer	MODERN SPECIES	32	MAU2 (ENSCHYG00000012428)	SUGP1 (ENSCHYG00000012677) #7	TM6SF2 (ENSCHYG00000012851) #8	HAPLN4 (ENSCHYG00000012901) #9	NCAN (ENSCHYG00000012951) #10	NR2C2AP (ENSCHYG00000013015) #11	RFXANK (ENSCHYG00000013090) #12	BORCS8 (ENSCHYG00000013210) #13	MEF2B (ENSCHYG00000013347) #14	TMEM161A (ENSCHYG00000013806) #15	SLC25A42 (ENSCHYG00000014137) #16	ARMC6 (ENSCHYG00000014214) #17	SUGP2 (ENSCHYG00000014360) #18	ENSCHYG00000014561 #19	DDX49 (ENSCHYG00000015448) #20	CERS1 (ENSCHYG00000015529) #22	GDF1 (ENSCHYG00000015658) #23	UPF1 (ENSCHYG00000015773) #24	COMP (ENSCHYG00000016040) #25	CRTC1 (ENSCHYG00000016471) #26	KLHL26 (ENSCHYG00000017020) #27	TMEM59L (ENSCHYG00000017122) #28	CRLF1 (ENSCHYG00000017284) #29	REX1BD (ENSCHYG00000017438) #30	UBA52 (ENSCHYG00000017560) #31	KXD1 (ENSCHYG00000017621)	FKBP8 (ENSCHYG00000017721) #33	ELL (ENSCHYG00000017915) #34	ISYNA1 (ENSCHYG00000018077) #35	SSBP4 (ENSCHYG00000018441) #36	LRRC25 (ENSCHYG00000018842) #37
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Carnivora	ANCESTRAL SPECIES	6	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Caniformia	ANCESTRAL SPECIES	4	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395.j #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Ursidae	ANCESTRAL SPECIES	11	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395.j #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Ursus	ANCESTRAL SPECIES	5	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395.j #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
American black bear	MODERN SPECIES	388																CERS1 (ENSUAMG00000007096) #22	GDF1 (ENSUAMG00000007095) #23	UPF1 (ENSUAMG00000007093) #24
Giant Panda	MODERN SPECIES	14	SUGP1 (ENSAMEG00000011838) #7	TM6SF2 (ENSAMEG00000011811) #8	HAPLN4 (ENSAMEG00000027731) #9	NCAN (ENSAMEG00000011734) #10	NR2C2AP (ENSAMEG00000011727) #11	RFXANK (ENSAMEG00000011703) #12	BORCS8 (ENSAMEG00000011698) #13	MEF2B (ENSAMEG00000011682) #14	TMEM161A (ENSAMEG00000011655) #15	SLC25A42 (ENSAMEG00000027218) #16	ARMC6 (ENSAMEG00000011621) #17	SUGP2 (ENSAMEG00000011613) #18	HOMER3 (ENSAMEG00000011595) #19	DDX49 (ENSAMEG00000011566) #20	COPE (ENSAMEG00000011524) #21	CERS1 (ENSAMEG00000011517) #22	UPF1 (ENSAMEG00000011474) #24	COMP (ENSAMEG00000011419) #25	CRTC1 (ENSAMEG00000011390) #26	KLHL26 (ENSAMEG00000011385) #27	TMEM59L (ENSAMEG00000011379) #28	CRLF1 (ENSAMEG00000011375) #29	REX1BD (ENSAMEG00000011371) #30	UBA52 (ENSAMEG00000011356) #31	ENSAMEG00000011348	ENSAMEG00000011325 #33	ELL (ENSAMEG00000011276) #34	ISYNA1 (ENSAMEG00000011239) #35	SSBP4 (ENSAMEG00000011185) #36	LRRC25 (ENSAMEG00000011181) #37	GDF15 (ENSAMEG00000011178)
Mustelinae	ANCESTRAL SPECIES	10	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395.j #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Ferret	MODERN SPECIES	238	MAU2 (ENSMPUG00000015402)	SUGP1 (ENSMPUG00000015404) #7	TM6SF2 (ENSMPUG00000015407) #8	HAPLN4 (ENSMPUG00000015424) #9	NCAN (ENSMPUG00000015433) #10	NR2C2AP (ENSMPUG00000015462) #11	RFXANK (ENSMPUG00000015469) #12	BORCS8 (ENSMPUG00000015471) #13	MEF2B (ENSMPUG00000015473) #14	TMEM161A (ENSMPUG00000015475) #15	SLC25A42 (ENSMPUG00000015477) #16	SUGP2 (ENSMPUG00000015478) #18	HOMER3 (ENSMPUG00000015484) #19	DDX49 (ENSMPUG00000015485) #20	COPE (ENSMPUG00000015486) #21	CERS1 (ENSMPUG00000015497) #22	GDF1 (ENSMPUG00000015514) #23	UPF1 (ENSMPUG00000015516) #24	COMP (ENSMPUG00000015518) #25	CRTC1 (ENSMPUG00000015520) #26	KLHL26 (ENSMPUG00000015521) #27	TMEM59L (ENSMPUG00000015522) #28	CRLF1 (ENSMPUG00000015524) #29	REX1BD (ENSMPUG00000015526) #30	ENSMPUG00000015527 ##31	KXD1 (ENSMPUG00000015537)	FKBP8 (ENSMPUG00000015541) #33	ELL (ENSMPUG00000015542) #34	ISYNA1 (ENSMPUG00000015543) #35	SSBP4 (ENSMPUG00000015560) #36	LRRC25 (ENSMPUG00000015584) #37
American mink	MODERN SPECIES	58	SUGP1 (ENSNVIG00000020747) #7	TM6SF2 (ENSNVIG00000020733) #8	HAPLN4 (ENSNVIG00000020713) #9	NCAN (ENSNVIG00000020377) #10	NR2CA (ENSNVIG00000020303) #11	RFXANK (ENSNVIG00000020264) #12	BORCS8 (ENSNVIG00000020221) #13	MEF2B (ENSNVIG00000020206) #14	TMEM161A (ENSNVIG00000020180) #15	S2542 (ENSNVIG00000020166) #16	ARMC6 (ENSNVIG00000020143) #17	SUGP2 (ENSNVIG00000020116) #18	HOMER3 (ENSNVIG00000020032) #19	DDX49 (ENSNVIG00000020003) #20	COPE (ENSNVIG00000019958) #21	CERS1 (ENSNVIG00000019939) #22	GDF1 (ENSNVIG00000019930) #23	UPF1 (ENSNVIG00000019863) #24	COMP (ENSNVIG00000018415) #25	CRTC1 (ENSNVIG00000018294) #26	KLHL26 (ENSNVIG00000018276) #27	TMEM59L (ENSNVIG00000018259) #28	CRLF1 (ENSNVIG00000018244) #29	REX1BD (ENSNVIG00000018234) #30	UBA52 (ENSNVIG00000018210) #31	KXD1 (ENSNVIG00000018138)	FKBP8 (ENSNVIG00000018099) #33	ELL (ENSNVIG00000018054) #34	ISYNA1 (ENSNVIG00000017993) #35	SSBP4 (ENSNVIG00000017915) #36	LRRC25 (ENSNVIG00000017909) #37
Canidae	ANCESTRAL SPECIES		ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478.b #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478.b #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Dog	MODERN SPECIES	12	SUGP1 (ENSCAFG00845014514) #7	TM6SF2 (ENSCAFG00845014561) #8	HAPLN4 (ENSCAFG00845014588) #9	NCAN (ENSCAFG00845014625) #10	RFXANK (ENSCAFG00845014775) #12	NR2C2AP (ENSCAFG00845018085) #11	BORCS8 (ENSCAFG00845018185) #13	MEF2B (ENSCAFG00845018253) #14	TMEM161A (ENSCAFG00845018423) #15	SLC25A42 (ENSCAFG00845018653) #16	ARMC6 (ENSCAFG00845018765) #17	SUGP2 (ENSCAFG00845018888) #18	HOMER3 (ENSCAFG00845019115) #19	DDX49 (ENSCAFG00845019266) #20	COPE (ENSCAFG00845019400) #21	CERS1 (ENSCAFG00845019662) #22	GDF1 (ENSCAFG00845019828) #23	UPF1 (ENSCAFG00845019866) #24	COMP (ENSCAFG00845020025) #25	ENSCAFG00845020236 #28	CRTC1 (ENSCAFG00845020362) #26	KLHL26 (ENSCAFG00845020669) #27	CRLF1 (ENSCAFG00845020775) #29	ENSCAFG00845020838 #30	UBA52 (ENSCAFG00845020932) #31	KXD1 (ENSCAFG00845021012)	FKBP8 (ENSCAFG00845021109) #33	ISYNA1 (ENSCAFG00845021270) #34	SSBP4 (ENSCAFG00845021896) #36	LRRC25 (ENSCAFG00845022385) #37	GDF15 (ENSCAFG00845022411)
Dingo	MODERN SPECIES	112	SUGP1 (ENSCAFG00020012508) #7	TM6SF2 (ENSCAFG00020012504) #8	HAPLN4 (ENSCAFG00020012500) #9	NCAN (ENSCAFG00020012454) #10	NR2C2AP (ENSCAFG00020012443) #11	RFXANK (ENSCAFG00020012437) #12	BORCS8 (ENSCAFG00020012435) #13	MEF2B (ENSCAFG00020012425) #14	TMEM161A (ENSCAFG00020012412) #15	SLC25A42 (ENSCAFG00020012408) #16	ARMC6 (ENSCAFG00020012404) #17	SUGP2 (ENSCAFG00020012392) #18	HOMER3 (ENSCAFG00020012389) #19	DDX49 (ENSCAFG00020012375) #20	COPE (ENSCAFG00020012363) #21	CERS1 (ENSCAFG00020012351) #22	GDF1 (ENSCAFG00020012350) #23	UPF1 (ENSCAFG00020012347) #24	COMP (ENSCAFG00020012328) #25	CRTC1 (ENSCAFG00020012293) #26	KLHL26 (ENSCAFG00020012290) #27	TMEM59L (ENSCAFG00020012289) #28	CRLF1 (ENSCAFG00020012282) #29	REX1BD (ENSCAFG00020012279) #30	ENSCAFG00020012276	ENSCAFG00020012269 ##31	KXD1 (ENSCAFG00020012268)	FKBP8 (ENSCAFG00020012233) #33	ELL (ENSCAFG00020012204) #34	ISYNA1 (ENSCAFG00020012181) #35	SSBP4 (ENSCAFG00020012164) #36
Red fox	MODERN SPECIES	5	SUGP1 (ENSVVUG00000007569) #7	TM6SF2 (ENSVVUG00000007584) #8	HAPLN4 (ENSVVUG00000007594) #9	NCAN (ENSVVUG00000007597) #10	NR2C2AP (ENSVVUG00000007609) #11	RFXANK (ENSVVUG00000007633) #12	BORCS8 (ENSVVUG00000007667) #13	MEF2B (ENSVVUG00000007672) #14	TMEM161A (ENSVVUG00000007683) #15	SLC25A42 (ENSVVUG00000007728) #16	ARMC6 (ENSVVUG00000007731) #17	SUGP2 (ENSVVUG00000007744) #18	HOMER3 (ENSVVUG00000007758) #19	DDX49 (ENSVVUG00000007767) #20	ENSVVUG00000007777 #21	CERS1 (ENSVVUG00000007783) #22	UPF1 (ENSVVUG00000007797) #24	ENSVVUG00000007818 #25	CRTC1 (ENSVVUG00000007833) #26	KLHL26 (ENSVVUG00000007964) #27	TMEM59L (ENSVVUG00000007974) #28	CRLF1 (ENSVVUG00000007976) #29	REX1BD (ENSVVUG00000007980) #30	UBA52 (ENSVVUG00000007989) #31	FKBP8 (ENSVVUG00000008005) #33	ELL (ENSVVUG00000008025) #34	ISYNA1 (ENSVVUG00000008037) #35	SSBP4 (ENSVVUG00000008060) #36	ENSVVUG00000008114	LRRC25 (ENSVVUG00000008124) #37	GDF15 (ENSVVUG00000008127)
Felidae	ANCESTRAL SPECIES	17	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Panthera	ANCESTRAL SPECIES	1	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Tiger	MODERN SPECIES	281	MAU2 (ENSPTIG00000013179)	SUGP1 (ENSPTIG00000013061) #7	TM6SF2 (ENSPTIG00000013026) #8	HAPLN4 (ENSPTIG00000013017) #9	NR2C2AP (ENSPTIG00000012962) #11	RFXANK (ENSPTIG00000012655) #12	BORCS8 (ENSPTIG00000012610) #13	MEF2B (ENSPTIG00000012475) #14	TMEM161A (ENSPTIG00000012395) #15	SLC25A42 (ENSPTIG00000012354) #16	ARMC6 (ENSPTIG00000012073) #17	SUGP2 (ENSPTIG00000012003) #18	HOMER3 (ENSPTIG00000011533) #19	DDX49 (ENSPTIG00000011259) #20	COPE (ENSPTIG00000010957) #21	CERS1 (ENSPTIG00000010849) #22	GDF1 (ENSPTIG00000010670) #23	UPF1 (ENSPTIG00000010159) #24	ENSPTIG00000010043 #25	CRTC1 (ENSPTIG00000009427) #26	ENSPTIG00000009351 #27	ENSPTIG00000009230 #27	TMEM59L (ENSPTIG00000009187) #28	CRLF1 (ENSPTIG00000009041) #29	ENSPTIG00000008919 #30	UBA52 (ENSPTIG00000008713) #31	KXD1 (ENSPTIG00000008232)	FKBP8 (ENSPTIG00000008090) #33	ELL (ENSPTIG00000007637) #34	ISYNA1 (ENSPTIG00000007457) #35	SSBP4 (ENSPTIG00000007035) #36
Panthera_a	ANCESTRAL SPECIES		ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00910000147684	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
leopard	MODERN SPECIES	68	MAU2 (ENSPPRG00000000643)	SUGP1 (ENSPPRG00000000880) #7	TM6SF2 (ENSPPRG00000001208) #8	HAPLN4 (ENSPPRG00000001581) #9	NR2C2AP (ENSPPRG00000003111) #11	RFXANK (ENSPPRG00000004266) #12	BORCS8 (ENSPPRG00000004580) #13	MEF2B (ENSPPRG00000006317) #14	TMEM161A (ENSPPRG00000008638) #15	SLC25A42 (ENSPPRG00000008936) #16	ARMC6 (ENSPPRG00000009582) #17	SUGP2 (ENSPPRG00000010924) #18	HOMER3 (ENSPPRG00000013004) #19	DDX49 (ENSPPRG00000013274) #20	COPE (ENSPPRG00000019668) #21	CERS1 (ENSPPRG00000021419) #22	GDF1 (ENSPPRG00000024438) #23	UPF1 (ENSPPRG00000023470) #24	COMP (ENSPPRG00000000723) #25	CRTC1 (ENSPPRG00000001977) #26	KLHL26 (ENSPPRG00000003359) #27	TMEM59L (ENSPPRG00000003959) #28	CRLF1 (ENSPPRG00000004235) #29	REX1BD (ENSPPRG00000004571) #30	UBA52 (ENSPPRG00000006788) #31	KXD1 (ENSPPRG00000007892)	FKBP8 (ENSPPRG00000008402) #33	ENSPPRG00000008580 #34	ELL (ENSPPRG00000009009) #34	ISYNA1 (ENSPPRG00000011081) #35	SSBP4 (ENSPPRG00000012939) #36
lion	MODERN SPECIES	2	SUGP1 (ENSPLOG00000001334) #7	TM6SF2 (ENSPLOG00000001308) #8	HAPLN4 (ENSPLOG00000001286) #9	NCAN (ENSPLOG00000001120) #10	ENSPLOG00000000980 #11	RFXANK (ENSPLOG00000000919) #12	BORCS8 (ENSPLOG00000000887) #13	MEF2B (ENSPLOG00000000863) #14	TMEM161A (ENSPLOG00000000833) #15	SLC25A42 (ENSPLOG00000000808) #16	ARMC6 (ENSPLOG00000000792) #17	SUGP2 (ENSPLOG00000000772) #18	HOMER3 (ENSPLOG00000000722) #19	DDX49 (ENSPLOG00000000667) #20	COPE (ENSPLOG00000000628) #21	CERS1 (ENSPLOG00000000599) #22	GDF1 (ENSPLOG00000000580) #23	UPF1 (ENSPLOG00000000562) #24	COMP (ENSPLOG00000000492) #25	CRTC1 (ENSPLOG00000000409) #26	KLHL26 (ENSPLOG00000000360) #27	TMEM59L (ENSPLOG00000000339) #28	CRLF1 (ENSPLOG00000000319) #29	ENSPLOG00000000303	REX1BD (ENSPLOG00000000289) #30	UBA52 (ENSPLOG00000000273) #31	KXD1 (ENSPLOG00000000255)	FKBP8 (ENSPLOG00000000234) #33	ELL (ENSPLOG00000000208) #34	ISYNA1 (ENSPLOG00000000180) #35	SSBP4 (ENSPLOG00000000155) #36
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Chiroptera	ANCESTRAL SPECIES	44	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Microchiroptera	ANCESTRAL SPECIES	43	ENSGT00410000025695.a #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Microbat	MODERN SPECIES	1248	TM6SF2 (ENSMLUG00000027634) #8	HAPLN4 (ENSMLUG00000017358) #9	NCAN (ENSMLUG00000017356) #10	NR2C2AP (ENSMLUG00000017355) #11	RFXANK (ENSMLUG00000017354) #12	BORCS8 (ENSMLUG00000025095) #13	MEF2B (ENSMLUG00000003299) #14	TMEM161A (ENSMLUG00000017352) #15	SLC25A42 (ENSMLUG00000012208) #16	ENSMLUG00000012203 #17	SUGP2 (ENSMLUG00000012189) #18	ENSMLUG00000025755	HOMER3 (ENSMLUG00000012170) #19	DDX49 (ENSMLUG00000012159) #20	COPE (ENSMLUG00000012147) #21	ENSMLUG00000026905 #22	ENSMLUG00000012140 #23	UPF1 (ENSMLUG00000012122) #24	COMP (ENSMLUG00000012249) #25	CRTC1 (ENSMLUG00000012234) #26	KLHL26 (ENSMLUG00000003470) #27	ENSMLUG00000028871	CRLF1 (ENSMLUG00000002437) #29	REX1BD (ENSMLUG00000030218) #30	ENSMLUG00000029594 #31	KXD1 (ENSMLUG00000002143)	FKBP8 (ENSMLUG00000002128) #33	ENSMLUG00000023645 #34	ENSMLUG00000002123 #34	ISYNA1 (ENSMLUG00000002119) #35	SSBP4 (ENSMLUG00000002107) #36
Greater horseshoe bat	MODERN SPECIES	9	MAU2 (ENSRFEG00010006479)	SUGP1 (ENSRFEG00010006391) #7	TM6SF2 (ENSRFEG00010006340) #8	HAPLN4 (ENSRFEG00010006311) #9	NCAN (ENSRFEG00010006275) #10	NR2C2AP (ENSRFEG00010006230) #11	RFXANK (ENSRFEG00010006139) #12	BORCS8 (ENSRFEG00010006052) #13	MEF2B (ENSRFEG00010005974) #14	TMEM161A (ENSRFEG00010005885) #15	SLC25A42 (ENSRFEG00010005823) #16	ARMC6 (ENSRFEG00010005797) #17	SUGP2 (ENSRFEG00010005746) #18	HOMER3 (ENSRFEG00010005693) #19	DDX49 (ENSRFEG00010005585) #20	CERS1 (ENSRFEG00010005439) #22	GDF1 (ENSRFEG00010020888) #23	UPF1 (ENSRFEG00010020838) #24	COMP (ENSRFEG00010020665) #25	CRTC1 (ENSRFEG00010020465) #26	KLHL26 (ENSRFEG00010020386) #27	TMEM59L (ENSRFEG00010020368) #28	CRLF1 (ENSRFEG00010020301) #29	ENSRFEG00010020261 #30	KXD1 (ENSRFEG00010020232)	FKBP8 (ENSRFEG00010020191) #33	ELL (ENSRFEG00010020153) #34	ISYNA1 (ENSRFEG00010020056) #35	SSBP4 (ENSRFEG00010019891) #36	LRRC25 (ENSRFEG00010019813) #37	GDF15 (ENSRFEG00010019801)
Equus	ANCESTRAL SPECIES	23	ENSGT00390000012198	ENSGT00410000025695.a #7	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00390000011631 #30	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Horse	MODERN SPECIES	13	MAU2 (ENSECAG00000001359)	SUGP1 (ENSECAG00000013871) #7	HAPLN4 (ENSECAG00000020045) #9	NCAN (ENSECAG00000016115) #10	NR2C2AP (ENSECAG00000015219) #11	RFXANK (ENSECAG00000009442) #12	BORCS8 (ENSECAG00000007592) #13	MEF2B (ENSECAG00000022642) #14	TMEM161A (ENSECAG00000013963) #15	SLC25A42 (ENSECAG00000011367) #16	ARMC6 (ENSECAG00000006428) #17	SUGP2 (ENSECAG00000000129) #18	HOMER3 (ENSECAG00000023105) #19	DDX49 (ENSECAG00000012194) #20	COPE (ENSECAG00000024390) #21	CERS1 (ENSECAG00000052582) #22	GDF1 (ENSECAG00000026851) #23	UPF1 (ENSECAG00000010639) #24	COMP (ENSECAG00000000336) #25	CRTC1 (ENSECAG00000012748) #26	KLHL26 (ENSECAG00000046223) #27	TMEM59L (ENSECAG00000000133) #28	REX1BD (ENSECAG00000021433) #30	UBA52 (ENSECAG00000020660) ##31	CRLF1 (ENSECAG00000023854) #29	KXD1 (ENSECAG00000020539)	FKBP8 (ENSECAG00000012306) #33	ELL (ENSECAG00000000466) #34	SSBP4 (ENSECAG00000017720) #36	ISYNA1 (ENSECAG00000019571) #35	LRRC25 (ENSECAG00000017682) #37
Donkey	MODERN SPECIES		MAU2 (ENSEASG00005006596)	SUGP1 (ENSEASG00005006593) #7	HAPLN4 (ENSEASG00005006590) #9	NCAN (ENSEASG00005006587) #10	NR2C2AP (ENSEASG00005027263) #11	RFXANK (ENSEASG00005006582) #12	BORCS8 (ENSEASG00005006580) #13	MEF2B (ENSEASG00005006578) #14	TMEM161A (ENSEASG00005006575) #15	SLC25A42 (ENSEASG00005006570) #16	ARMC6 (ENSEASG00005006568) #17	SUGP2 (ENSEASG00005006565) #18	HOMER3 (ENSEASG00005006562) #19	DDX49 (ENSEASG00005006560) #20	COPE (ENSEASG00005006557) #21	CERS1 (ENSEASG00005030456) #22	GDF1 (ENSEASG00005029430) #23	UPF1 (ENSEASG00005006549) #24	COMP (ENSEASG00005006320) #25	CRTC1 (ENSEASG00005006280) #26	KLHL26 (ENSEASG00005006276) #27	TMEM59L (ENSEASG00005006274) #28	CRLF1 (ENSEASG00005006270) #29	ENSEASG00005025213 #30	UBA52 (ENSEASG00005033556) #31	KXD1 (ENSEASG00005031599)	FKBP8 (ENSEASG00005006254) #33	ELL (ENSEASG00005006252) #34	ISYNA1 (ENSEASG00005006248) #35	SSBP4 (ENSEASG00005006244) #36	LRRC25 (ENSEASG00005006241) #37
Marsupialia	ANCESTRAL SPECIES	25	ENSGT00950000183103.d.b	ENSGT00940000157036	ENSGT00390000018299	ENSGT00950000183005.b.c	ENSGT00940000162613	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00940000161872
Opossum	MODERN SPECIES	2	ATP8B3 (ENSMODG00000004209)	ONECUT3 (ENSMODG00000004149)	TCF3 (ENSMODG00000004143)	UQCR11 (ENSMODG00000004132)	ENSMODG00000004125	MEX3D (ENSMODG00000004116)	MEF2B (ENSMODG00000004105) #14	TMEM161A (ENSMODG00000004083) #15	SLC25A42 (ENSMODG00000045593) #16	ARMC6 (ENSMODG00000004028) #17	SUGP2 (ENSMODG00000003992) #18	ENSMODG00000043314	HOMER3 (ENSMODG00000003771) #19	DDX49 (ENSMODG00000003745) #20	COPE (ENSMODG00000003729) #21	CERS1 (ENSMODG00000023939) #22	GDF1 (ENSMODG00000049198) #23	UPF1 (ENSMODG00000003689) #24	COMP (ENSMODG00000003651) #25	CRTC1 (ENSMODG00000003607) #26	KLHL26 (ENSMODG00000003568) #27	ENSMODG00000003550 #28	CRLF1 (ENSMODG00000003510) #29	UBA52 (ENSMODG00000003499) #31	ENSMODG00000003489	FKBP8 (ENSMODG00000003483) #33	ENSMODG00000003473	ELL (ENSMODG00000003470) #34	ENSMODG00000023947	PGPEP1 (ENSMODG00000044087)	ENSMODG00000029612
Marsupialia_b	ANCESTRAL SPECIES	24	ENSGT00950000183103.d.b	ENSGT00940000157036	ENSGT00390000018299	ENSGT00950000183005.b.c	ENSGT00940000162613	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00940000161872
Diprotodontia	ANCESTRAL SPECIES	54	ENSGT00950000183103.d.b	ENSGT00940000157036	ENSGT00390000018299	ENSGT00950000183005.b.c	ENSGT00940000162613	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00940000153593.c.b ##31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Diprotodontia_a	ANCESTRAL SPECIES	53	ENSGT00950000183103.d.b	ENSGT00940000157036	ENSGT00390000018299	ENSGT00950000183005.b.c	ENSGT00940000162613	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000162926 #23	ENSGT00940000157413 #24	ENSGT00940000162169 #25	ENSGT00390000010652.D.b #26	ENSGT00940000159238 #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00940000161872
Common wonbat	MODERN SPECIES	626	ATP8B3 (ENSVURG00010015529)	ONECUT3 (ENSVURG00010015518)	TCF3 (ENSVURG00010015477)	ENSVURG00010015467	ENSVURG00010015463	MEX3D (ENSVURG00010015379)	ENSVURG00010015363	MEF2B (ENSVURG00010015357) #14	TMEM161A (ENSVURG00010015346) #15	SLC25A42 (ENSVURG00010015339) #16	ARMC6 (ENSVURG00010015325) #17	SUGP2 (ENSVURG00010015311) #18	HOMER3 (ENSVURG00010015278) #19	DDX49 (ENSVURG00010015248) #20	COPE (ENSVURG00010015238) #21	CERS1 (ENSVURG00010015235) #22	ENSVURG00010015230 #23	UPF1 (ENSVURG00010015221) #24	KLHL26 (ENSVURG00010015213) #27	ENSVURG00010015204 #28	CRLF1 (ENSVURG00010015189) #29	ENSVURG00010015181	UBA52 (ENSVURG00010015122) #31	KXD1 (ENSVURG00010015106)	FKBP8 (ENSVURG00010015095) #33	ELL (ENSVURG00010015067) #34	ISYNA1 (ENSVURG00010015054) #35	SSBP4 (ENSVURG00010015019) #36	ENSVURG00010015005	PGPEP1 (ENSVURG00010015000)	LSM4 (ENSVURG00010014994)
koala	MODERN SPECIES	133	TCF3 (ENSPCIG00000000701)	ENSPCIG00000000759	ENSPCIG00000000769	ENSPCIG00000000783	MEX3D (ENSPCIG00000000826)	ENSPCIG00000000833	MEF2B (ENSPCIG00000000841) #14	TMEM161A (ENSPCIG00000000862) #15	SLC25A42 (ENSPCIG00000033976) #16	ARMC6 (ENSPCIG00000000957) #17	SUGP2 (ENSPCIG00000000974) #18	ENSPCIG00000000990	HOMER3 (ENSPCIG00000001019) #19	DDX49 (ENSPCIG00000001050) #20	COPE (ENSPCIG00000001137) #21	CERS1 (ENSPCIG00000006153) #22	ENSPCIG00000006155 #23	UPF1 (ENSPCIG00000006156) #24	COMP (ENSPCIG00000006229) #25	CRTC1 (ENSPCIG00000023392) #26	KLHL26 (ENSPCIG00000012947) #27	ENSPCIG00000031076 #28	CRLF1 (ENSPCIG00000016157) #29	ENSPCIG00000016153	KXD1 (ENSPCIG00000016150)	FKBP8 (ENSPCIG00000016149) #33	ELL (ENSPCIG00000018295) #34	ISYNA1 (ENSPCIG00000018294) #35	SSBP4 (ENSPCIG00000018292) #36	ENSPCIG00000003528	PGPEP1 (ENSPCIG00000031873)
Tasmanian devil	MODERN SPECIES		ONECUT3 (ENSSHAG00000031650)	TCF3 (ENSSHAG00000013735)	ENSSHAG00000013346	ENSSHAG00000024607	ENSSHAG00000030655	ENSSHAG00000012631 #14	TMEM161A (ENSSHAG00000012380) #15	SLC25A42 (ENSSHAG00000021004) #16	SUGP2 (ENSSHAG00000011705) #18	ARMC6 (ENSSHAG00000011840) #17	ENSSHAG00000011270	HOMER3 (ENSSHAG00000011091) #19	DDX49 (ENSSHAG00000010982) #20	COPE (ENSSHAG00000010821) #21	ENSSHAG00000030192 #23	CERS1 (ENSSHAG00000010705) #22	UPF1 (ENSSHAG00000010499) #24	COMP (ENSSHAG00000009531) #25	CRTC1 (ENSSHAG00000009155) #26	KLHL26 (ENSSHAG00000008083) #27	ENSSHAG00000024929 #28	CRLF1 (ENSSHAG00000007192) #29	ENSSHAG00000007133	UBA52 (ENSSHAG00000021283) #31	KXD1 (ENSSHAG00000006949)	FKBP8 (ENSSHAG00000006428) #33	ISYNA1 (ENSSHAG00000003750) #35	SSBP4 (ENSSHAG00000002793) #36	ENSSHAG00000023181	ENSSHAG00000027753	PGPEP1 (ENSSHAG00000031355)
Platypus	MODERN SPECIES	84	HAPLN4 (ENSOANG00000029891) #9	ENSOANG00000032130 #10	NR2C2AP (ENSOANG00000040380) #11	ENSOANG00000003658 #12	BORCS8 (ENSOANG00000043258) #13	ENSOANG00000046511	MEF2B (ENSOANG00000010126) #14	TMEM161A (ENSOANG00000011575) #15	SLC25A42 (ENSOANG00000001030) #16	ARMC6 (ENSOANG00000045954) #17	SUGP2 (ENSOANG00000004574) #18	ENSOANG00000043871	ENSOANG00000004573	ENSOANG00000044420 #20	COPE (ENSOANG00000004571) #21	CERS1 (ENSOANG00000004570) #22	ENSOANG00000004569	ENSOANG00000004568 #24	COMP (ENSOANG00000002729) #25	CRTC1 (ENSOANG00000041674) #26	KLHL26 (ENSOANG00000005746) #27	ENSOANG00000045153 #28	CRLF1 (ENSOANG00000036818) #29	ENSOANG00000047121	UBA52 (ENSOANG00000005752) #31	KXD1 (ENSOANG00000038897)	FKBP8 (ENSOANG00000042600) #33	ELL (ENSOANG00000031962) #34	ISYNA1 (ENSOANG00000031278) #35	SSBP4 (ENSOANG00000046676) #36	ENSOANG00000036012 #37
Sauria	ANCESTRAL SPECIES	20	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Lepidosauria	ANCESTRAL SPECIES	35	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081.m.b #19	ENSGT00940000167763	ENSGT00940000158081.m.a #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b.d.a #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00390000004001 #37
Episquamata	ANCESTRAL SPECIES	18	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081.m.a #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b.d.a #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00940000161332	ENSGT00940000162457	ENSGT00940000159258	ENSGT00950000185298	ENSGT00390000007991	ENSGT00390000001201
Laterata	ANCESTRAL SPECIES	37	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081.m.a #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24
Argentine black and white tegu	MODERN SPECIES	106	HAPLN4 (ENSSMRG00000000158) #9	NCAN (ENSSMRG00000000110) #10	NR2C2AP (ENSSMRG00000000094) #11	RFXANK (ENSSMRG00000000051) #12	BORCS8 (ENSSMRG00000000033) #13	ENSSMRG00000022975	MEF2B (ENSSMRG00000022974) #14	TMEM161A (ENSSMRG00000022973) #15	SLC25A42 (ENSSMRG00000022972) #16	ARMC6 (ENSSMRG00000022971) #17	SUGP2 (ENSSMRG00000022970) #18	ENSSMRG00000022969	HOMER3 (ENSSMRG00000022968) #19	DDX49 (ENSSMRG00000022967) #20	COPE (ENSSMRG00000022966) #21	CERS1 (ENSSMRG00000022965) #22	ENSSMRG00000022964	UPF1 (ENSSMRG00000022963) #24	GTPBP3 (ENSSMRG00000022962)	ANO8 (ENSSMRG00000022961)	DDA1 (ENSSMRG00000022960)	ELL (ENSSMRG00000022959) #34	ISYNA1 (ENSSMRG00000022958) #35	SSBP4 (ENSSMRG00000022957) #36	ENSSMRG00000022956	ENSSMRG00000022955	PGPEP1 (ENSSMRG00000022954)	LSM4 (ENSSMRG00000022953)	ENSSMRG00000022952	ENSSMRG00000022950	ENSSMRG00000022949
Common wall lizard	MODERN SPECIES	9	ENSPMRG00000021689	MEF2B (ENSPMRG00000021693) #14	TMEM161A (ENSPMRG00000021702) #15	SLC25A42 (ENSPMRG00000021711) #16	ENSPMRG00000021717 #17	ENSPMRG00000021724	ENSPMRG00000021726	ENSPMRG00000021729 #17	ENSPMRG00000021733 #17	SUGP2 (ENSPMRG00000021741) #18	ENSPMRG00000021750	HOMER3 (ENSPMRG00000021766) #19	DDX49 (ENSPMRG00000021780) #20	COPE (ENSPMRG00000021792) #21	ENSPMRG00000021803	CERS1 (ENSPMRG00000021809) #22	ENSPMRG00000021814	UPF1 (ENSPMRG00000021822) #24	ENSPMRG00000021836	ENSPMRG00000021845	ENSPMRG00000021897	ENSPMRG00000021907	S1PR4 (ENSPMRG00000021915)	ENSPMRG00000021921	ENSPMRG00000021928	ENSPMRG00000021943	ENSPMRG00000021959	ENSPMRG00000021977	YJU2 (ENSPMRG00000022009)	ENSPMRG00000022019	ENSPMRG00000022022
Toxicofera	ANCESTRAL SPECIES	31	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081.m.a #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24
Elapidae	ANCESTRAL SPECIES	3	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081.m.a #19	ENSGT00730000111231.i.a #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24
Indian cobra	MODERN SPECIES		ENSNNAG00000001558	HAPLN4 (ENSNNAG00000001578) #9	NCAN (ENSNNAG00000001611) #10	NR2C2AP (ENSNNAG00000001682) #11	RFXANK (ENSNNAG00000001702) #12	BORCS8 (ENSNNAG00000001727) #13	ENSNNAG00000001734 #14	TMEM161A (ENSNNAG00000001750) #15	SLC25A42 (ENSNNAG00000001764) #16	ARMC6 (ENSNNAG00000001775) #17	SUGP2 (ENSNNAG00000001797) #18	ENSNNAG00000001830	HOMER3 (ENSNNAG00000001848) #19	DDX49 (ENSNNAG00000001874) #20	COPE (ENSNNAG00000001905) #21	CERS1 (ENSNNAG00000001921) #22	ENSNNAG00000001932	UPF1 (ENSNNAG00000001946) #24	ENSNNAG00000001970	CRTC1 (ENSNNAG00000001982) #26	ENSNNAG00000001994	ENSNNAG00000001998 #27	ENSNNAG00000002004 #27	TMEM59L (ENSNNAG00000002015) #28	CRLF1 (ENSNNAG00000002027) #29	ENSNNAG00000002033	UBA52 (ENSNNAG00000002039) #31	FSTL3 (ENSNNAG00000002051)	ENSNNAG00000002062	PIP5K1C (ENSNNAG00000002076)	MRPL54 (ENSNNAG00000002107)
Elapidae_a	ANCESTRAL SPECIES	10	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00950000185950	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081.m.a #19	ENSGT00730000111231.i.a #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24
Blue-lipped sea krait	MODERN SPECIES	10281																CERS1 (ENSLLTG00000008095) #22	ENSLLTG00000008123
Acanthophiinae	ANCESTRAL SPECIES	13	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081.m.a #19	ENSGT00730000111231.i.a #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24
Mainland tiger snake	MODERN SPECIES	360															COPE (ENSNSUG00000005730) #21	CERS1 (ENSNSUG00000005740) #22	ENSNSUG00000005741	UPF1 (ENSNSUG00000005744) #24	ENSNSUG00000005920	CRTC1 (ENSNSUG00000005921) #26	KLHL26 (ENSNSUG00000005922) #27	TMEM59L (ENSNSUG00000005923) #28
Eastern brown snake	MODERN SPECIES	10	ENSPTXG00000002343 #10	NR2C2AP (ENSPTXG00000002344) #11	RFXANK (ENSPTXG00000002349) #12	BORCS8 (ENSPTXG00000002351) #13	ENSPTXG00000002354	MEF2B (ENSPTXG00000002356) #14	TMEM161A (ENSPTXG00000002360) #15	SLC25A42 (ENSPTXG00000002364) #16	ARMC6 (ENSPTXG00000002367) #17	SUGP2 (ENSPTXG00000002368) #18	ENSPTXG00000002371	ENSPTXG00000002373 #19	ENSPTXG00000002375 #19	DDX49 (ENSPTXG00000002377) #20	COPE (ENSPTXG00000002378) #21	CERS1 (ENSPTXG00000002381) #22	ENSPTXG00000002384	UPF1 (ENSPTXG00000002385) #24	THBS4 (ENSPTXG00000002388)	CRTC1 (ENSPTXG00000002389) #26	KLHL26 (ENSPTXG00000002391) #27	TMEM59L (ENSPTXG00000002392) #28	CRLF1 (ENSPTXG00000002393) #29	ENSPTXG00000002395	UBA52 (ENSPTXG00000002396) #31	FSTL3 (ENSPTXG00000002400)	PRSS57 (ENSPTXG00000002581)	ENSPTXG00000002583	C19orf25 (ENSPTXG00000002589)	MRPL54 (ENSPTXG00000002590)	APBA3 (ENSPTXG00000002593)
tuatara	MODERN SPECIES	1565									ARMC6 (ENSSPUG00000010822) #17	ENSSPUG00000010778 #18	ENSSPUG00000010736 #18	HOMER3 (ENSSPUG00000010716) #19	ENSSPUG00000010703 #19	DDX49 (ENSSPUG00000010688) #20	COPE (ENSSPUG00000010666) #21	CERS1 (ENSSPUG00000010617) #22	ENSSPUG00000010588	UPF1 (ENSSPUG00000010538) #24	CRTC1 (ENSSPUG00000010424) #26	KLHL26 (ENSSPUG00000010387) #27	TMEM59L (ENSSPUG00000010363) #28	CRLF1 (ENSSPUG00000010342) #29	ENSSPUG00000010329	UBA52 (ENSSPUG00000010306) #31	KXD1 (ENSSPUG00000010296)	FKBP8 (ENSSPUG00000010283) #33	ELL (ENSSPUG00000010266) #34	ISYNA1 (ENSSPUG00000010254) #35	SSBP4 (ENSSPUG00000010206) #36	ENSSPUG00000010198 #37	PGPEP1 (ENSSPUG00000010192)
Archelosauria	ANCESTRAL SPECIES	20	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Archosauria	ANCESTRAL SPECIES	16	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Aves	ANCESTRAL SPECIES	20	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Neognathae	ANCESTRAL SPECIES	21	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Galloanserae	ANCESTRAL SPECIES	20	ENSGT00940000160926 #9	ENSGT00940000158649.d #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Anatidae	ANCESTRAL SPECIES	71	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649.d #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.d ##31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395.r #35
Pink-footed goose	MODERN SPECIES	308	TM6SF2 (ENSABRG00000003169) #8	HAPLN4 (ENSABRG00000003196) #9	NCAN (ENSABRG00000003206) #10	ENSABRG00000003239 #11	RFXANK (ENSABRG00000003275) #12	BORCS8 (ENSABRG00000003310) #13	ENSABRG00000003339	MEF2B (ENSABRG00000003346) #14	TMEM161A (ENSABRG00000003380) #15	SLC25A42 (ENSABRG00000003394) #16	ARMC6 (ENSABRG00000003410) #17	SUGP2 (ENSABRG00000003433) #18	HOMER3 (ENSABRG00000003480) #19	DDX49 (ENSABRG00000003533) #20	COPE (ENSABRG00000003553) #21	CERS1 (ENSABRG00000003583) #22	ENSABRG00000003615	UPF1 (ENSABRG00000003691) #24	ENSABRG00000005294	CRTC1 (ENSABRG00000005352) #26	KLHL26 (ENSABRG00000005372) #27	TMEM59L (ENSABRG00000005381) #28	CRLF1 (ENSABRG00000005385) #29	UBA52 (ENSABRG00000005391) ##31	KXD1 (ENSABRG00000005399)	FKBP8 (ENSABRG00000005403) #33	ELL (ENSABRG00000005411) #34	ISYNA1 (ENSABRG00000005435) #35
Duck	MODERN SPECIES	20	ENSAPLG00000020158	ENSAPLG00000019522	MAU2 (ENSAPLG00000002818)	SUGP1 (ENSAPLG00000002500) #7	HAPLN4 (ENSAPLG00000000916) #9	ENSAPLG00000017029 #10	NR2C2AP (ENSAPLG00000016443) #11	RFXANK (ENSAPLG00000016423) #12	ENSAPLG00000025930	TMEM161A (ENSAPLG00000006657) #15	SLC25A42 (ENSAPLG00000006582) #16	ARMC6 (ENSAPLG00000006480) #17	SUGP2 (ENSAPLG00000006469) #18	HOMER3 (ENSAPLG00000008170) #19	COPE (ENSAPLG00000008757) #21	CERS1 (ENSAPLG00000008945) #22	ENSAPLG00000009148	UPF1 (ENSAPLG00000009175) #24	ENSAPLG00000009709	CRTC1 (ENSAPLG00000010657) #26	KLHL26 (ENSAPLG00000011078) #27	ELL (ENSAPLG00000006360) #34	PGPEP1 (ENSAPLG00000007370)	ENSAPLG00000001869	ARHGEF18 (ENSAPLG00000015732)	INSR (ENSAPLG00000014259)	ENSAPLG00000025695	ENSAPLG00000021258	MYO9B (ENSAPLG00000013123)	HAUS8 (ENSAPLG00000012957)	ENSAPLG00000012206
Phasianidae	ANCESTRAL SPECIES	19	ENSGT00940000160926 #9	ENSGT00940000158649.d #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00940000161872
Japanese quail	MODERN SPECIES	20	NCAN (ENSCJPG00005011168) #10	ENSCJPG00005011170 #11	RFXANK (ENSCJPG00005011171) #12	BORCS8 (ENSCJPG00005011172) #13	ENSCJPG00005011173	MEF2B (ENSCJPG00005011174) #14	ENSCJPG00005011175	SLC25A42 (ENSCJPG00005011178) #16	ARMC6 (ENSCJPG00005011186) #17	SUGP2 (ENSCJPG00005011187) #18	ENSCJPG00005011188	ENSCJPG00005011189 #19	ENSCJPG00005011190 #19	DDX49 (ENSCJPG00005011191) #20	COPE (ENSCJPG00005011259) #21	CERS1 (ENSCJPG00005011264) #22	ENSCJPG00005011266	UPF1 (ENSCJPG00005011267) #24	ENSCJPG00005011352	CRTC1 (ENSCJPG00005011543) #26	KLHL26 (ENSCJPG00005011608) #27	ENSCJPG00005011609	CRLF1 (ENSCJPG00005011610) #29	ENSCJPG00005011611	FKBP8 (ENSCJPG00005011613) #33	UBA52 (ENSCJPG00005011684) #31	KXD1 (ENSCJPG00005011685)	ELL (ENSCJPG00005011687) #34	SSBP4 (ENSCJPG00005011692) #36	ISYNA1 (ENSCJPG00005011896) #35	ENSCJPG00005011898
Phasianidae_b	ANCESTRAL SPECIES	20	ENSGT00940000160926 #9	ENSGT00940000158649.d #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00940000161872
Turkey	MODERN SPECIES	23	ENSMGAG00000020135	NR2C2AP (ENSMGAG00000017590) #11	RFXANK (ENSMGAG00000004446) #12	BORCS8 (ENSMGAG00000004466) #13	ENSMGAG00000004351	MEF2B (ENSMGAG00000004354) #14	ENSMGAG00000018039	TMEM161A (ENSMGAG00000004433) #15	SLC25A42 (ENSMGAG00000004473) #16	ARMC6 (ENSMGAG00000004486) #17	SUGP2 (ENSMGAG00000004496) #18	ENSMGAG00000004513	HOMER3 (ENSMGAG00000004581) #19	DDX49 (ENSMGAG00000004605) #20	COPE (ENSMGAG00000004649) #21	CERS1 (ENSMGAG00000004709) #22	ENSMGAG00000004721	UPF1 (ENSMGAG00000004745) #24	ENSMGAG00000004780	ENSMGAG00000004970 #27	TMEM59L (ENSMGAG00000004986) #28	CRLF1 (ENSMGAG00000008435) #29	ENSMGAG00000021060	UBA52 (ENSMGAG00000021275) #31	KXD1 (ENSMGAG00000018696)	FKBP8 (ENSMGAG00000004939) #33	ELL (ENSMGAG00000005093) #34	ENSMGAG00000018105 #35	ENSMGAG00000022829	PGPEP1 (ENSMGAG00000005130)	LSM4 (ENSMGAG00000020592)
Chicken	MODERN SPECIES	20	NCAN (ENSGALG00010028386) #10	NR2C2AP (ENSGALG00010028430) #11	RFXANK (ENSGALG00010028432) #12	BORCS8 (ENSGALG00010028439) #13	ENSGALG00010028443	MEF2B (ENSGALG00010028444) #14	TMEM161A (ENSGALG00010028131) #15	SLC25A42 (ENSGALG00010028147) #16	ARMC6 (ENSGALG00010028150) #17	SUGP2 (ENSGALG00010028124) #18	ENSGALG00010028446 #18	ENSGALG00010028152	HOMER3 (ENSGALG00010028744) #19	DDX49 (ENSGALG00010028158) #20	COPE (ENSGALG00010028170) #21	CERS1 (ENSGALG00010028172) #22	GDF3 (ENSGALG00010028173)	UPF1 (ENSGALG00010028176) #24	COMP (ENSGALG00010028177)	CRTC1 (ENSGALG00010028183) #26	KLHL26 (ENSGALG00010028191) #27	TMEM59L (ENSGALG00010028451) #28	CRLF1 (ENSGALG00010028460) #29	ENSGALG00010028465	UBA52 (ENSGALG00010027131) #31	FKBP8 (ENSGALG00010027137) #33	KXD1 (ENSGALG00010027146)	ELL (ENSGALG00010027148) #34	ISYNA1 (ENSGALG00010027156) #35	SSBP4 (ENSGALG00010027168) #36	ENSGALG00010027172
Neognathae_b	ANCESTRAL SPECIES	22	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Passeriformes	ANCESTRAL SPECIES	34	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Passeriformes_d	ANCESTRAL SPECIES	35	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Flycatcher	MODERN SPECIES	20	SGTA (ENSFALG00000027653)	ENSFALG00000025438	SLC39A3 (ENSFALG00000027233)	DIRAS1 (ENSFALG00000026581)	ENSFALG00000026177	ENSFALG00000027214	ENSFALG00000010583 #7	TM6SF2 (ENSFALG00000028745) #8	HAPLN4 (ENSFALG00000025367) #9	NCAN (ENSFALG00000008279) #10	NR2C2AP (ENSFALG00000008269) #11	ENSFALG00000027827	ENSFALG00000009275 #19	ENSFALG00000027136	COPE (ENSFALG00000009287) #21	CERS1 (ENSFALG00000009299) #22	UPF1 (ENSFALG00000009312) #24	ENSFALG00000009345	ENSFALG00000025225	CRTC1 (ENSFALG00000009377) #26	KLHL26 (ENSFALG00000014947) #27	ENSFALG00000028577	TMEM59L (ENSFALG00000009391) #28	CRLF1 (ENSFALG00000009404) #29	ENSFALG00000023166	FKBP8 (ENSFALG00000009383) #33	ELL (ENSFALG00000009424) #34	ISYNA1 (ENSFALG00000009446) #35	ENSFALG00000009453	PGPEP1 (ENSFALG00000009462)	ENSFALG00000009478
Passeriformes_g	ANCESTRAL SPECIES	39	ENSGT00410000025695.a.h #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Passeroidea	ANCESTRAL SPECIES	38	ENSGT00410000025695.a.h #7	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Zebra finch	MODERN SPECIES	21	TM6SF2 (ENSTGUG00000013966) #8	HAPLN4 (ENSTGUG00000019161) #9	NCAN (ENSTGUG00000019059) #10	ENSTGUG00000020853 #11	RFXANK (ENSTGUG00000014033) #12	ENSTGUG00000024488 #13	MEF2B (ENSTGUG00000022364) #14	ENSTGUG00000023122	TMEM161A (ENSTGUG00000025437) #15	SLC25A42 (ENSTGUG00000020561) #16	ARMC6 (ENSTGUG00000001090) #17	SUGP2 (ENSTGUG00000001088) #18	HOMER3 (ENSTGUG00000001080) #19	DDX49 (ENSTGUG00000001072) #20	ENSTGUG00000029565 #21	CERS1 (ENSTGUG00000014035) #22	ENSTGUG00000028778	UPF1 (ENSTGUG00000001057) #24	ENSTGUG00000014102	CRTC1 (ENSTGUG00000001067) #26	KLHL26 (ENSTGUG00000001064) #27	TMEM59L (ENSTGUG00000020934) #28	CRLF1 (ENSTGUG00000001061) #29	ENSTGUG00000028566	UBA52 (ENSTGUG00000024751) ##31	KXD1 (ENSTGUG00000001051)	FKBP8 (ENSTGUG00000001043) #33	ELL (ENSTGUG00000001031) #34	ISYNA1 (ENSTGUG00000029076) #35	ENSTGUG00000026522 #36	ENSTGUG00000022226
Medium ground finch	MODERN SPECIES	353																CERS1 (ENSGFOG00000004438) #22	UPF1 (ENSGFOG00000004398) #24	ENSGFOG00000004335	ENSGFOG00000004309	CRTC1 (ENSGFOG00000004248) #26	KLHL26 (ENSGFOG00000004235) #27	CRLF1 (ENSGFOG00000004226) #29	KXD1 (ENSGFOG00000004222)	FKBP8 (ENSGFOG00000004214) #33	ELL (ENSGFOG00000004196) #34	ISYNA1 (ENSGFOG00000004185) #35
Neognathae_c	ANCESTRAL SPECIES	24	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000156569.a.a ##29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36
Golden eagle	MODERN SPECIES	3	HAPLN4 (ENSACCG00020005415) #9	NCAN (ENSACCG00020005458) #10	ENSACCG00020005528	NR2C2AP (ENSACCG00020005548) #11	RFXANK (ENSACCG00020005611) #12	BORCS8 (ENSACCG00020005634) #13	ENSACCG00020005651	MEF2B (ENSACCG00020005665) #14	TMEM161A (ENSACCG00020005730) #15	SLC25A42 (ENSACCG00020005755) #16	ARMC6 (ENSACCG00020005768) #17	SUGP2 (ENSACCG00020005795) #18	HOMER3 (ENSACCG00020005833) #19	DDX49 (ENSACCG00020005865) #20	COPE (ENSACCG00020005888) #21	CERS1 (ENSACCG00020005915) #22	ENSACCG00020005919	UPF1 (ENSACCG00020005946) #24	ENSACCG00020005982	CRTC1 (ENSACCG00020006031) #26	KLHL26 (ENSACCG00020006048) #27	TMEM59L (ENSACCG00020006064) #28	ENSACCG00020006087 ##29	ENSACCG00020006101	UBA52 (ENSACCG00020006118) ##31	KXD1 (ENSACCG00020006135)	FKBP8 (ENSACCG00020006152) #33	ELL (ENSACCG00020006177) #34	ISYNA1 (ENSACCG00020006198) #35	SSBP4 (ENSACCG00020006329) #36	ENSACCG00020006502
Kakapo	MODERN SPECIES	13	NCAN (ENSSHBG00005016099) #10	NR2C2AP (ENSSHBG00005016311) #11	RFXANK (ENSSHBG00005016324) #12	BORCS8 (ENSSHBG00005016340) #13	ENSSHBG00005016346	MEF2B (ENSSHBG00005016361) #14	TMEM161A (ENSSHBG00005016377) #15	SLC25A42 (ENSSHBG00005016405) #16	ARMC6 (ENSSHBG00005016636) #17	SUGP2 (ENSSHBG00005016643) #18	ENSSHBG00005016648	HOMER3 (ENSSHBG00005016668) #19	ENSSHBG00005016679 #19	DDX49 (ENSSHBG00005016700) #20	COPE (ENSSHBG00005017048) #21	CERS1 (ENSSHBG00005017057) #22	ENSSHBG00005017060	UPF1 (ENSSHBG00005017089) #24	ENSSHBG00005017399	CRTC1 (ENSSHBG00005017446) #26	KLHL26 (ENSSHBG00005017448) #27	TMEM59L (ENSSHBG00005017449) #28	CRLF1 (ENSSHBG00005017451) #29	ENSSHBG00005017455	UBA52 (ENSSHBG00005017457) #31	KXD1 (ENSSHBG00005017459)	FKBP8 (ENSSHBG00005017464) #33	ELL (ENSSHBG00005017473) #34	ISYNA1 (ENSSHBG00005017482) #35	SSBP4 (ENSSHBG00005017488) #36	ENSSHBG00005017492
African ostrich	MODERN SPECIES	749										ARMC6 (ENSSCUG00000010205) #17	SUGP2 (ENSSCUG00000010204) #18	ENSSCUG00000010202	HOMER3 (ENSSCUG00000010201) #19	DDX49 (ENSSCUG00000010199) #20	COPE (ENSSCUG00000010198) #21	CERS1 (ENSSCUG00000010197) #22	ENSSCUG00000010196	UPF1 (ENSSCUG00000010194) #24	ENSSCUG00000010190	CRTC1 (ENSSCUG00000010183) #26	KLHL26 (ENSSCUG00000010182) #27
Cryptodira	ANCESTRAL SPECIES	19	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Testudinoidea	ANCESTRAL SPECIES	18	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Emydidae	ANCESTRAL SPECIES	14	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
painted turtle	MODERN SPECIES	771	HAPLN4 (ENSCPBG00000012460) #9	NCAN (ENSCPBG00000012461) #10	NR2C2AP (ENSCPBG00000012463) #11	RFXANK (ENSCPBG00000012464) #12	BORCS8 (ENSCPBG00000012467) #13	ENSCPBG00000012469	MEF2B (ENSCPBG00000012471) #14	TMEM161A (ENSCPBG00000012479) #15	SLC25A42 (ENSCPBG00000012483) #16	ARMC6 (ENSCPBG00000012485) #17	SUGP2 (ENSCPBG00000012487) #18	ENSCPBG00000012490	HOMER3 (ENSCPBG00000012496) #19	DDX49 (ENSCPBG00000012500) #20	COPE (ENSCPBG00000012504) #21	CERS1 (ENSCPBG00000012508) #22	ENSCPBG00000012510	UPF1 (ENSCPBG00000012513) #24	THBS4 (ENSCPBG00000012536)	CRTC1 (ENSCPBG00000012907) #26	KLHL26 (ENSCPBG00000012909) #27	TMEM59L (ENSCPBG00000012910) #28	CRLF1 (ENSCPBG00000012911) #29	ENSCPBG00000012912	UBA52 (ENSCPBG00000012913) #31	KXD1 (ENSCPBG00000012914)	FKBP8 (ENSCPBG00000012915) #33	ELL (ENSCPBG00000012916) #34	ISYNA1 (ENSCPBG00000012918) #35	SSBP4 (ENSCPBG00000012919) #36	ENSCPBG00000012920
Three-toed box turtle	MODERN SPECIES	92	HAPLN4 (ENSTMTG00000013225) #9	NCAN (ENSTMTG00000013156) #10	NR2C2AP (ENSTMTG00000013134) #11	RFXANK (ENSTMTG00000013105) #12	BORCS8 (ENSTMTG00000013093) #13	ENSTMTG00000013028	MEF2B (ENSTMTG00000013005) #14	TMEM161A (ENSTMTG00000012984) #15	SLC25A42 (ENSTMTG00000012962) #16	ARMC6 (ENSTMTG00000012947) #17	SUGP2 (ENSTMTG00000012920) #18	ENSTMTG00000012889	HOMER3 (ENSTMTG00000012853) #19	DDX49 (ENSTMTG00000012790) #20	COPE (ENSTMTG00000012775) #21	CERS1 (ENSTMTG00000012752) #22	ENSTMTG00000012739	UPF1 (ENSTMTG00000012695) #24	ENSTMTG00000012670	CRTC1 (ENSTMTG00000012645) #26	KLHL26 (ENSTMTG00000012633) #27	TMEM59L (ENSTMTG00000012614) #28	CRLF1 (ENSTMTG00000012585) #29	ENSTMTG00000012572	UBA52 (ENSTMTG00000012556) #31	KXD1 (ENSTMTG00000012547)	FKBP8 (ENSTMTG00000012525) #33	ELL (ENSTMTG00000012487) #34	ENSTMTG00000012456 ##36	ENSTMTG00000012439	ENSTMTG00000012432
Testudinidae	ANCESTRAL SPECIES	20	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000167763	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416	ENSGT00940000157413 #24	ENSGT00940000155227	ENSGT00390000010652.D.b #26	ENSGT00940000159238.b #27	ENSGT00390000008279.b #28	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00940000153593.c.a #31	ENSGT00530000064192	ENSGT00940000156705 #33	ENSGT00940000155914 #34	ENSGT00390000018395 #35	ENSGT00950000183049.C #36	ENSGT00950000185433
Goode s thornscrub tortoise	MODERN SPECIES	14	HAPLN4 (ENSGEVG00005005235) #9	NCAN (ENSGEVG00005005147) #10	NR2C2AP (ENSGEVG00005005076) #11	RFXANK (ENSGEVG00005005039) #12	BORCS8 (ENSGEVG00005005013) #13	ENSGEVG00005004987	MEF2B (ENSGEVG00005004959) #14	TMEM161A (ENSGEVG00005004899) #15	SLC25A42 (ENSGEVG00005004855) #16	ARMC6 (ENSGEVG00005004824) #17	SUGP2 (ENSGEVG00005004782) #18	ENSGEVG00005004681	HOMER3 (ENSGEVG00005004624) #19	DDX49 (ENSGEVG00005004539) #20	COPE (ENSGEVG00005004472) #21	CERS1 (ENSGEVG00005004366) #22	ENSGEVG00005004318	UPF1 (ENSGEVG00005019427) #24	THBS4 (ENSGEVG00005019413)	CRTC1 (ENSGEVG00005019397) #26	KLHL26 (ENSGEVG00005019386) #27	TMEM59L (ENSGEVG00005019360) #28	CRLF1 (ENSGEVG00005019342) #29	ENSGEVG00005019334	UBA52 (ENSGEVG00005019323) #31	KXD1 (ENSGEVG00005019317)	FKBP8 (ENSGEVG00005019307) #33	ENSGEVG00005019301	ELL (ENSGEVG00005019294) #34	ISYNA1 (ENSGEVG00005019284) #35	SSBP4 (ENSGEVG00005019269) #36
Abingdon island giant tortoise	MODERN SPECIES	897										ARMC6 (ENSCABG00000016061) #17	SUGP2 (ENSCABG00000016062) #18	ENSCABG00000016063	HOMER3 (ENSCABG00000016067) #19	DDX49 (ENSCABG00000016075) #20	COPE (ENSCABG00000016084) #21	CERS1 (ENSCABG00000016108) #22	ENSCABG00000016109	UPF1 (ENSCABG00000016111) #24	ENSCABG00000016259	CRTC1 (ENSCABG00000016260) #26	KLHL26 (ENSCABG00000016263) #27	TMEM59L (ENSCABG00000016267) #28	CRLF1 (ENSCABG00000016270) #29	ENSCABG00000016271	UBA52 (ENSCABG00000016273) #31	KXD1 (ENSCABG00000016274)	FKBP8 (ENSCABG00000016277) #33	ELL (ENSCABG00000016281) #34	ISYNA1 (ENSCABG00000016309) #35	SSBP4 (ENSCABG00000016310) #36	ENSCABG00000016313
Chinese turtle	MODERN SPECIES	1790	HAPLN4 (ENSPSIG00000017388) #9	NCAN (ENSPSIG00000017408) #10	ENSPSIG00000017603	ENSPSIG00000001137	NR2C2AP (ENSPSIG00000017608) #11	RFXANK (ENSPSIG00000017645) #12	BORCS8 (ENSPSIG00000006585) #13	TMEM161A (ENSPSIG00000006789) #15	SLC25A42 (ENSPSIG00000007452) #16	ARMC6 (ENSPSIG00000008070) #17	SUGP2 (ENSPSIG00000008256) #18	ENSPSIG00000008490	HOMER3 (ENSPSIG00000008524) #19	DDX49 (ENSPSIG00000008625) #20	COPE (ENSPSIG00000009381) #21	CERS1 (ENSPSIG00000009415) #22	ENSPSIG00000009471	UPF1 (ENSPSIG00000009491) #24	ENSPSIG00000009643	CRTC1 (ENSPSIG00000010543) #26	KLHL26 (ENSPSIG00000010574) #27	TMEM59L (ENSPSIG00000010763) #28	CRLF1 (ENSPSIG00000011140) #29	UBA52 (ENSPSIG00000011198) #31	KXD1 (ENSPSIG00000011318)	FKBP8 (ENSPSIG00000011511) #33	ELL (ENSPSIG00000011611) #34	SSBP4 (ENSPSIG00000012047) #36	PGPEP1 (ENSPSIG00000012192)	LSM4 (ENSPSIG00000012358)
Anura	ANCESTRAL SPECIES	119	ENSGT00390000012913.a #8	ENSGT00940000160926 #9	ENSGT00940000158649 #10	ENSGT00390000017748 #11	ENSGT00940000160753 #12	ENSGT00390000014856 #13	ENSGT00940000165199	ENSGT00940000160699 #14	ENSGT00390000000672.a.a #15	ENSGT00940000158163 #16	ENSGT00390000002913 #17	ENSGT00410000025695.b #18	ENSGT00940000158081 #19	ENSGT00730000111231 #20	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000164416.b
Frog	MODERN SPECIES		MRPL34 (ENSXETG00000036912)	abhd8 (ENSXETG00000013090)	trabd2a (ENSXETG00000013102)	hook3 (ENSXETG00000010213)	rnf170 (ENSXETG00000027376)	ENSXETG00000037717	hopx (ENSXETG00000037382)	arl9 (ENSXETG00000027377)	srp72 (ENSXETG00000010205)	jund.2 (ENSXETG00000044588)	thap1 (ENSXETG00000010197)	ENSXETG00000045258	ENSXETG00000034872	homer3 (ENSXETG00000010136) #19	cope (ENSXETG00000010134) #21	cers1 (ENSXETG00000010133) #22	ddx49 (ENSXETG00000010135) #20	gdf1 (ENSXETG00000010131)	gdf3 (ENSXETG00000002076)	klf2 (ENSXETG00000002075)	eps15l1 (ENSXETG00000002074)	c19orf44 (ENSXETG00000002073)	cherp (ENSXETG00000002072)	med26 (ENSXETG00000021451)	smim7 (ENSXETG00000025580)	tmem38a (ENSXETG00000021455)	ENSXETG00000021456	myo9b (ENSXETG00000031954)	haus8 (ENSXETG00000033040)	cpamd8 (ENSXETG00000032091)	f2rl3 (ENSXETG00000013500)
Leishan spiny toad	MODERN SPECIES		BORCS8 (ENSLLEG00000022858) #13	ENSLLEG00000022900	MEF2B (ENSLLEG00000022939) #14	TMEM161A (ENSLLEG00000023032) #15	SLC25A42 (ENSLLEG00000023359) #16	ENSLLEG00000023562	ARMC6 (ENSLLEG00000023586) #17	SUGP2 (ENSLLEG00000023662) #18	ENSLLEG00000023826	ENSLLEG00000023894	ENSLLEG00000023920	HOMER3 (ENSLLEG00000024083) #19	ENSLLEG00000024299	DDX49 (ENSLLEG00000024349) #20	COPE (ENSLLEG00000024473) #21	CERS1 (ENSLLEG00000024933) #22	ENSLLEG00000024991	XPA (ENSLLEG00000025010)	ENSLLEG00000025079	NDUFA13 (ENSLLEG00000025189)	ENSLLEG00000025227	ENSLLEG00000025252	CILP2 (ENSLLEG00000025352)	ENSLLEG00000025407	ENSLLEG00000025453	GTPBP3 (ENSLLEG00000025585)	ANO8 (ENSLLEG00000025777)	ENSLLEG00000000083	ENSLLEG00000000089	DDA1 (ENSLLEG00000000102)	MRPL34 (ENSLLEG00000000111)
Coelacanth	MODERN SPECIES	2280													UPF1 (ENSLACG00000008482) #24	DDX49 (ENSLACG00000008244) #20	COPE (ENSLACG00000008024) #21	CERS1 (ENSLACG00000007347) #22	FKBP8 (ENSLACG00000006472) #33	ELL (ENSLACG00000002726) #34
Actinopterygii	ANCESTRAL SPECIES	61	ENSGT00940000160036	ENSGT00940000159258	ENSGT00390000001201	ENSGT00390000018044.b.b	ENSGT00940000163917.b	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000159842	ENSGT00940000154779.a.a	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00940000157375	ENSGT00940000155404	ENSGT00390000014361	ENSGT00940000156845	ENSGT00940000164530	ENSGT01050000244887.B	ENSGT00500000044945.a
Reedfish	MODERN SPECIES	3	polr2eb (ENSECRG00000014616)	ARHGAP45 (ENSECRG00000014666)	tjp3 (ENSECRG00000014758)	PIP5K1C (ENSECRG00000014872)	mrpl54 (ENSECRG00000014938)	malt2 (ENSECRG00000014970)	rx1 (ENSECRG00000015017)	cplx4c (ENSECRG00000015086)	MATK (ENSECRG00000015127)	ATCAY (ENSECRG00000015171)	NMRK2 (ENSECRG00000015218)	loxl5b (ENSECRG00000015303)	mydgf (ENSECRG00000015506)	tnfaip8l1 (ENSECRG00000015531)	cope (ENSECRG00000015548) #21	CERS1 (ENSECRG00000015592) #22	ENSECRG00000015646	arhgef18a (ENSECRG00000015672)	insrb (ENSECRG00000015724)	use1 (ENSECRG00000015778)	ENSECRG00000015802	mfsd14a2 (ENSECRG00000015839)	s1pr4 (ENSECRG00000015875)	ncln (ENSECRG00000015892)	enc3 (ENSECRG00000015936)	ENSECRG00000015947	timm13 (ENSECRG00000015961)	ENSECRG00000016015	ENSECRG00000016132	sppl2 (ENSECRG00000016173)	lsm7 (ENSECRG00000016204)
Neopterygii	ANCESTRAL SPECIES	126		ENSGT00390000013811	ENSGT00390000001201	ENSGT00390000018044.b.b	ENSGT00940000163917.b	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000165007	ENSGT00940000154779.a.a	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000164530	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000160104	ENSGT00510000049239.a	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774
Osteoglossocephalai	ANCESTRAL SPECIES	35	ENSGT00940000161210	ENSGT00940000159560	ENSGT00940000165447	ENSGT00940000163917.b	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00940000164530	ENSGT00390000014361	ENSGT00940000155404	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000160104	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774	ENSGT00530000063801.a.a	ENSGT01030000234599.a.b.d.b.b	ENSGT00940000155733.a.b
Osteoglossiformes	ANCESTRAL SPECIES	2	ENSGT00390000018044.b.b.e	ENSGT00390000001201	ENSGT00390000013811	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00390000012078.a.a	ENSGT00950000182915.b.b.a.b.b	ENSGT00390000002505	ENSGT00940000163917.b	ENSGT00940000160775	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00940000164530.f	ENSGT00940000155404.g	ENSGT00940000157375.c.a	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.d
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	4	safb (ENSPKIG00000009902)	malt2 (ENSPKIG00000009958)	mrpl54 (ENSPKIG00000009984)	fam32a (ENSPKIG00000009996)	ap1m1 (ENSPKIG00000010048)	ENSPKIG00000010130	EPS15L1 (ENSPKIG00000010154)	rad23ab (ENSPKIG00000010204)	ENSPKIG00000010261	ENSPKIG00000010285	rx1 (ENSPKIG00000010303)	MATK (ENSPKIG00000010328)	ATCAY (ENSPKIG00000010369)	nmrk2 (ENSPKIG00000010393)	tnfaip8l1 (ENSPKIG00000010419)	CERS1 (ENSPKIG00000010433) #22	ncln (ENSPKIG00000010457)	s1pr4 (ENSPKIG00000010500)	MYO9B (ENSPKIG00000010594)	ENSPKIG00000010912	INSR (ENSPKIG00000010986)	ENSPKIG00000011061	ARHGEF18 (ENSPKIG00000011091)	enc3 (ENSPKIG00000011160)	timm13 (ENSPKIG00000011170)	ENSPKIG00000011197	sppl2 (ENSPKIG00000011242)	lsm7 (ENSPKIG00000011325)	ENSPKIG00000011358	cers4a (ENSPKIG00000011374) ##22	fbn2b (ENSPKIG00000011440)
P. kingsleyae	MODERN SPECIES	17	LPL (ENSPKIG00000000174)	ENSPKIG00000000228	ENSPKIG00000000256	ENSPKIG00000000275	ENSPKIG00000000340	ENSPKIG00000000357	ENSPKIG00000000371	cherp (ENSPKIG00000000423)	ENSPKIG00000000493	cplx4c (ENSPKIG00000000506)	ZFR2 (ENSPKIG00000000524)	ATCAY (ENSPKIG00000000549)	loxl5b (ENSPKIG00000000573)	cope (ENSPKIG00000000623) #21	mydgf (ENSPKIG00000000657)	CERS1 (ENSPKIG00000000675) #22	ENSPKIG00000000729	mfsd14a2 (ENSPKIG00000000844)	use1 (ENSPKIG00000000876)	ENSPKIG00000000920	ARHGEF18 (ENSPKIG00000001069)	ENSPKIG00000001257 ##22	CTXN1 (ENSPKIG00000001312)	hnrnpm (ENSPKIG00000001332)	marchf2 (ENSPKIG00000001364)	ENSPKIG00000001389	ENSPKIG00000001410	ONECUT3 (ENSPKIG00000001423)	OSBPL9 (ENSPKIG00000001482)	ENSPKIG00000001642	lurap1 (ENSPKIG00000001725)
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	24	malt2 (ENSSFOG00015008100)	mrpl54 (ENSSFOG00015008073)	fam32a (ENSSFOG00015008067)	ap1m1 (ENSSFOG00015008023)	klf2b (ENSSFOG00015024583)	EPS15L1 (ENSSFOG00015007740)	rad23ab (ENSSFOG00015030225)	ENSSFOG00015007595	ENSSFOG00015007554	rx1 (ENSSFOG00015007534)	MATK (ENSSFOG00015007486)	ATCAY (ENSSFOG00015007428)	mibp (ENSSFOG00015007387)	loxl5a (ENSSFOG00015007376)	tnfaip8l1 (ENSSFOG00015007357)	CERS1 (ENSSFOG00015007346) #22	ncln (ENSSFOG00015007294)	s1pr4 (ENSSFOG00015007287)	MYO9B (ENSSFOG00015007204)	ENSSFOG00015026640	INSR (ENSSFOG00015006996)	ARHGEF18 (ENSSFOG00015006935)	enc3 (ENSSFOG00015024763)	timm13 (ENSSFOG00015006900)	ENSSFOG00015006815	sppl2 (ENSSFOG00015006776)	lsm7 (ENSSFOG00015006728)	ENSSFOG00015006709	cers4a (ENSSFOG00015006652) ##22	fbn2b (ENSSFOG00015006450)	CTXN1 (ENSSFOG00015025184)
Asian bonytongue	MODERN SPECIES	17	CIB3 (ENSSFOG00015007791)	RAB8A (ENSSFOG00015007811)	TPM4 (ENSSFOG00015007878)	ENSSFOG00015007937	ENSSFOG00015032715	ENSSFOG00015031414	ENSSFOG00015007997	cherp (ENSSFOG00015008022)	ENSSFOG00015008092	cplx4c (ENSSFOG00015030852)	ZFR2 (ENSSFOG00015008157)	ATCAY (ENSSFOG00015008182)	loxl5b (ENSSFOG00015008206)	mydgf (ENSSFOG00015008264)	cope (ENSSFOG00015008318) #21	CERS1 (ENSSFOG00015008357) #22	ENSSFOG00015028704	mfsd14a2 (ENSSFOG00015007072)	use1 (ENSSFOG00015025821)	INSR (ENSSFOG00015008555)	ARHGEF18 (ENSSFOG00015008667)	ENSSFOG00015008767 ##22	CTXN1 (ENSSFOG00015032822)	hnrnpm (ENSSFOG00015008815)	MARCHF2 (ENSSFOG00015009018)	rab11bb (ENSSFOG00015006245)	PIP5K1C (ENSSFOG00015009080)	ENSSFOG00015032093	ENSSFOG00015009196	ARHGAP45 (ENSSFOG00015009214)	tm6sf2a (ENSSFOG00015009281) #8
Clupeocephala	ANCESTRAL SPECIES	4	ENSGT00940000155438.b	ENSGT00390000012078.a.a	ENSGT00950000182915.b.b.a.b.c.a	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.d
Euteleosteomorpha	ANCESTRAL SPECIES	46	ENSGT00940000155438.b	ENSGT00390000012078.a.a	ENSGT00950000182915.b.b.a.b.c.a	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.d
Acanthomorphata	ANCESTRAL SPECIES	11	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.d
Euacanthomorphacea	ANCESTRAL SPECIES	9	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Percomorphaceae	ANCESTRAL SPECIES	12	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Tiger tail seahorse	MODERN SPECIES	191			ENSHCOG00000008339	sin3b (ENSHCOG00000008407)	ENSHCOG00000008421	ENSHCOG00000008456	rx1 (ENSHCOG00000008476)	ZFR2 (ENSHCOG00000008696)	ENSHCOG00000008714	ATCAY (ENSHCOG00000008810)	mibp (ENSHCOG00000008830)	loxl5a (ENSHCOG00000000283)	mydgf (ENSHCOG00000008858)	tnfaip8l1 (ENSHCOG00000008868)	cope (ENSHCOG00000008896) #21	CERS1 (ENSHCOG00000008902) #22	ncln (ENSHCOG00000008945)	s1pr4 (ENSHCOG00000008950)	MYO9B (ENSHCOG00000009010)	use1 (ENSHCOG00000009040)
Percomorphaceae_B	ANCESTRAL SPECIES	9	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000181720	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A
Percomorphaceae_C	ANCESTRAL SPECIES	8	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000181720	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Eupercaria	ANCESTRAL SPECIES	8	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000181720	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Tetraodontidae	ANCESTRAL SPECIES	5	ENSGT00940000155130	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000162251	ENSGT00390000004877	ENSGT00940000155273	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A
Tetraodon	MODERN SPECIES		CACNA1E (ENSTNIG00000015498)	CEP350 (ENSTNIG00000015499)	qsox1 (ENSTNIG00000015500)	lhx4 (ENSTNIG00000015501)	acbd6 (ENSTNIG00000015502)	xpr1a (ENSTNIG00000015503)	sin3b (ENSTNIG00000015504)	rx1 (ENSTNIG00000015505)	MATK (ENSTNIG00000015506)	ENSTNIG00000015507	ATCAY (ENSTNIG00000015508)	mibp (ENSTNIG00000015509)	loxl5a (ENSTNIG00000015510)	tnfaip8l1 (ENSTNIG00000015511)	cope (ENSTNIG00000015512) #21	CERS1 (ENSTNIG00000015513) #22	ncln (ENSTNIG00000015514)	s1pr4 (ENSTNIG00000015515)	ENSTNIG00000015516	use1 (ENSTNIG00000015517)	insrb (ENSTNIG00000015518)	ARHGEF18 (ENSTNIG00000015519)	enc3 (ENSTNIG00000015520)	enc3 (ENSTNIG00000015521)	timm13 (ENSTNIG00000015522)	ENSTNIG00000015523	ENSTNIG00000015524	lsm7 (ENSTNIG00000015525)	ENSTNIG00000015526	cers4a (ENSTNIG00000015527) ##22	fbn2b (ENSTNIG00000015528)
Fugu	MODERN SPECIES	12	qsox1 (ENSTRUG00000009955)	lhx4 (ENSTRUG00000010188)	acbd6 (ENSTRUG00000010296)	xpr1a (ENSTRUG00000010426)	sin3b (ENSTRUG00000010673)	haus5 (ENSTRUG00000010882)	rx1 (ENSTRUG00000010917)	MATK (ENSTRUG00000010957)	ZFR2 (ENSTRUG00000011108)	ATCAY (ENSTRUG00000011254)	mibp (ENSTRUG00000011362)	loxl5a (ENSTRUG00000023745)	mydgf (ENSTRUG00000011621)	tnfaip8l1 (ENSTRUG00000029290)	cope (ENSTRUG00000011693) #21	CERS1 (ENSTRUG00000011752) #22	ncln (ENSTRUG00000011791)	s1pr4 (ENSTRUG00000011913)	MYO9B (ENSTRUG00000011915)	use1 (ENSTRUG00000019549)	insrb (ENSTRUG00000012281)	ARHGEF18 (ENSTRUG00000012535)	enc3 (ENSTRUG00000012650)	timm13 (ENSTRUG00000032063)	ENSTRUG00000012735	lsm7 (ENSTRUG00000022913)	ENSTRUG00000012838	cers4a (ENSTRUG00000012847) ##22	fbn2b (ENSTRUG00000012996)	CTXN1 (ENSTRUG00000013685)	timm44 (ENSTRUG00000013690)
Eupecaria_A	ANCESTRAL SPECIES	11	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000181720	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Ballan wrasse	MODERN SPECIES	558																CERS1 (ENSLBEG00000014373) #22	ncln (ENSLBEG00000014415)	s1pr4 (ENSLBEG00000014539)	MYO9B (ENSLBEG00000014595)	gna11a (ENSLBEG00000014741)	ENSLBEG00000014818	ENSLBEG00000014855
Eupecaria_B	ANCESTRAL SPECIES	10	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000181720	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Perciformes	ANCESTRAL SPECIES	8	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000181720	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Cottioidei	ANCESTRAL SPECIES	5	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000181720	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Lumpfish	MODERN SPECIES	19	lhx4 (ENSCLMG00005006415)	acbd6 (ENSCLMG00005006414)	xpr1a (ENSCLMG00005006413)	sin3b (ENSCLMG00005006338)	haus5 (ENSCLMG00005006273)	ENSCLMG00005006247	rx1 (ENSCLMG00005006225)	MATK (ENSCLMG00005005841)	ZFR2 (ENSCLMG00005005834)	ATCAY (ENSCLMG00005005829)	mibp (ENSCLMG00005005827)	loxl5a (ENSCLMG00005005798)	mydgf (ENSCLMG00005005796)	tnfaip8l1 (ENSCLMG00005005794)	cope (ENSCLMG00005005717) #21	CERS1 (ENSCLMG00005005714) #22	ncln (ENSCLMG00005005696)	s1pr4 (ENSCLMG00005005694)	MYO9B (ENSCLMG00005003085)	use1 (ENSCLMG00005002825)	insrb (ENSCLMG00005022671)	ENSCLMG00005022613	ENSCLMG00005022612	ARHGEF18 (ENSCLMG00005022606)	enc3 (ENSCLMG00005022601)	timm13 (ENSCLMG00005022600)	ENSCLMG00005022599	lsm7 (ENSCLMG00005022598)	ENSCLMG00005022596	cers4a (ENSCLMG00005022557) ##22	fbn2b (ENSCLMG00005022553)
Stickleback	MODERN SPECIES	8	acbd6 (ENSGACG00000010822)	xpr1a (ENSGACG00000010782)	sin3b (ENSGACG00000010766)	haus5 (ENSGACG00000010745)	ENSGACG00000010712	rx1 (ENSGACG00000010707)	MATK (ENSGACG00000010666)	ZFR2 (ENSGACG00000010658)	ATCAY (ENSGACG00000010652)	mibp (ENSGACG00000010621)	loxl5a (ENSGACG00000010616)	mydgf (ENSGACG00000010612)	ENSGACG00000010610	tnfaip8l1 (ENSGACG00000010593)	cope (ENSGACG00000010568) #21	CERS1 (ENSGACG00000010560) #22	ncln (ENSGACG00000010528)	s1pr4 (ENSGACG00000010526)	MYO9B (ENSGACG00000010494)	use1 (ENSGACG00000010489)	insrb (ENSGACG00000010475)	ARHGEF18 (ENSGACG00000010468)	ENSGACG00000010465	enc3 (ENSGACG00000010425)	timm13 (ENSGACG00000010398)	ENSGACG00000010394	lsm7 (ENSGACG00000010390)	cers4a (ENSGACG00000010353) ##22	fbn2b (ENSGACG00000010321)	CTXN1 (ENSGACG00000010319)	timm44 (ENSGACG00000010289)
Perciformes_a	ANCESTRAL SPECIES	6	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	21	LHX4 (ENSSLUG00000011618)	acbd6 (ENSSLUG00000011630)	xpr1a (ENSSLUG00000011639)	sin3b (ENSSLUG00000011701)	haus5 (ENSSLUG00000012230)	ENSSLUG00000012247	rx1 (ENSSLUG00000012435)	MATK (ENSSLUG00000012459)	ZFR2 (ENSSLUG00000012779)	ATCAY (ENSSLUG00000012868)	mibp (ENSSLUG00000012877)	loxl5a (ENSSLUG00000012884)	mydgf (ENSSLUG00000012887)	tnfaip8l1 (ENSSLUG00000012891)	cope (ENSSLUG00000012899) #21	CERS1 (ENSSLUG00000012920) #22	ncln (ENSSLUG00000012944)	CERS1 (ENSSLUG00000012985) #22	s1pr4 (ENSSLUG00000012993)	MYO9B (ENSSLUG00000013040)	use1 (ENSSLUG00000014764)	insrb (ENSSLUG00000014921)	ENSSLUG00000018641	ARHGEF18 (ENSSLUG00000018655)	enc3 (ENSSLUG00000018691)	timm13 (ENSSLUG00000018699)	ENSSLUG00000018716	lsm7 (ENSSLUG00000018783)	cers4a (ENSSLUG00000018794) ##22	fbn2b (ENSSLUG00000018814)	CTXN1 (ENSSLUG00000018874)
Pike perch	MODERN SPECIES	21	xpr1a (ENSSLUG00000011639)	sin3b (ENSSLUG00000011701)	haus5 (ENSSLUG00000012230)	ENSSLUG00000012247	rx1 (ENSSLUG00000012435)	MATK (ENSSLUG00000012459)	ZFR2 (ENSSLUG00000012779)	ATCAY (ENSSLUG00000012868)	mibp (ENSSLUG00000012877)	loxl5a (ENSSLUG00000012884)	mydgf (ENSSLUG00000012887)	tnfaip8l1 (ENSSLUG00000012891)	cope (ENSSLUG00000012899) #21	CERS1 (ENSSLUG00000012920) #22	ncln (ENSSLUG00000012944)	CERS1 (ENSSLUG00000012985) #22	s1pr4 (ENSSLUG00000012993)	MYO9B (ENSSLUG00000013040)	use1 (ENSSLUG00000014764)	insrb (ENSSLUG00000014921)	ENSSLUG00000018641	ARHGEF18 (ENSSLUG00000018655)	enc3 (ENSSLUG00000018691)	timm13 (ENSSLUG00000018699)	ENSSLUG00000018716	lsm7 (ENSSLUG00000018783)	cers4a (ENSSLUG00000018794) ##22	fbn2b (ENSSLUG00000018814)	CTXN1 (ENSSLUG00000018874)	timm44 (ENSSLUG00000018913)	hnrnpm (ENSSLUG00000019376)
Eupecaria_C	ANCESTRAL SPECIES	4	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Gilthead seabream	MODERN SPECIES	2	lhx4 (ENSSAUG00010025804)	acbd6 (ENSSAUG00010025806)	ENSSAUG00010025810	sin3b (ENSSAUG00010025826)	haus5 (ENSSAUG00010026062)	ENSSAUG00010026064	rx1 (ENSSAUG00010026071)	MATK (ENSSAUG00010026078)	ZFR2 (ENSSAUG00010026100)	ATCAY (ENSSAUG00010026102)	mibp (ENSSAUG00010026103)	loxl5a (ENSSAUG00010026104)	mydgf (ENSSAUG00010026106)	tnfaip8l1 (ENSSAUG00010026107)	cope (ENSSAUG00010026111) #21	CERS1 (ENSSAUG00010026113) #22	ncln (ENSSAUG00010026120)	MYO9B (ENSSAUG00010026277)	use1 (ENSSAUG00010026460)	insrb (ENSSAUG00010026476)	ARHGEF18 (ENSSAUG00010026833)	enc3 (ENSSAUG00010026838)	Tim13 (ENSSAUG00010026842)	ENSSAUG00010026847	lsm7 (ENSSAUG00010026851)	ENSSAUG00010026852	cers4a (ENSSAUG00010026854) ##22	fbn2b (ENSSAUG00010026868)	CTXN1 (ENSSAUG00010026890)	timm44 (ENSSAUG00010026893)	hnrnpm (ENSSAUG00010026894)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	3	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
European seabass	MODERN SPECIES	17	lhx4 (ENSDLAG00005020552)	acbd6 (ENSDLAG00005020504)	xpr1a (ENSDLAG00005020431)	ENSDLAG00005020234	ENSDLAG00005030513	ENSDLAG00005019944	rx1 (ENSDLAG00005034047)	MATK (ENSDLAG00005018909)	ENSDLAG00005018828	ATCAY (ENSDLAG00005032179)	mibp (ENSDLAG00005018798)	loxl5a (ENSDLAG00005018726)	mydgf (ENSDLAG00005018703)	tnfaip8l1 (ENSDLAG00005030047)	ENSDLAG00005018560 #21	ENSDLAG00005030951 #22	ncln (ENSDLAG00005030273)	s1pr4 (ENSDLAG00005018036)	ENSDLAG00005014930	use1 (ENSDLAG00005028648)	insrb (ENSDLAG00005009460)	ENSDLAG00005009327	enc3 (ENSDLAG00005009313)	timm13 (ENSDLAG00005028836)	ENSDLAG00005027045	ENSDLAG00005009280	cers4a (ENSDLAG00005034667) ##22	ENSDLAG00005008432	ENSDLAG00005027887	timm44 (ENSDLAG00005007613)	ENSDLAG00005007457
Large yellow croaker	MODERN SPECIES	489	lhx4 (ENSLCRG00005018111)	acbd6 (ENSLCRG00005018112)	xpr1a (ENSLCRG00005018114)	sin3b (ENSLCRG00005018581)	haus5 (ENSLCRG00005018586)	ENSLCRG00005018596	rx1 (ENSLCRG00005018617)	MATK (ENSLCRG00005018619)	ZFR2 (ENSLCRG00005019038)	ATCAY (ENSLCRG00005019042)	mibp (ENSLCRG00005019049)	loxl5a (ENSLCRG00005019052)	mydgf (ENSLCRG00005019055)	tnfaip8l1 (ENSLCRG00005019057)	cope (ENSLCRG00005019064) #21	CERS1 (ENSLCRG00005019135) #22	ncln (ENSLCRG00005019137)	s1pr4 (ENSLCRG00005019151)	MYO9B (ENSLCRG00005019165)	use1 (ENSLCRG00005019347)	insrb (ENSLCRG00005019382)	ENSLCRG00005021038	enc3 (ENSLCRG00005021039)	timm13 (ENSLCRG00005021040)	ENSLCRG00005021042	ENSLCRG00005021045	lsm7 (ENSLCRG00005021046)	ENSLCRG00005021047	cers4a (ENSLCRG00005021048) ##22	fbn2b (ENSLCRG00005021077)	ENSLCRG00005021155
Percomorphaceae_D	ANCESTRAL SPECIES	8	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Anabantaria	ANCESTRAL SPECIES	7	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595
Anabantoidei	ANCESTRAL SPECIES	6	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595
Climbing perch	MODERN SPECIES	17	lhx4 (ENSATEG00000007338)	acbd6 (ENSATEG00000007366)	xpr1a (ENSATEG00000007398)	ENSATEG00000007456	ENSATEG00000007539	ENSATEG00000007577	rx1 (ENSATEG00000007635)	MATK (ENSATEG00000007657)	ENSATEG00000007722	ATCAY (ENSATEG00000007736)	mibp (ENSATEG00000007841)	loxl5a (ENSATEG00000007879)	mydgf (ENSATEG00000027535)	tnfaip8l1 (ENSATEG00000007914)	ENSATEG00000007929 #21	ENSATEG00000007989 #22	ncln (ENSATEG00000008012)	s1pr4 (ENSATEG00000008095)	ENSATEG00000008105	use1 (ENSATEG00000008250)	insrb (ENSATEG00000008275)	ENSATEG00000008386	enc3 (ENSATEG00000008432)	timm13 (ENSATEG00000029496)	ENSATEG00000008476	lsm7 (ENSATEG00000026156)	ENSATEG00000027293	cers4a (ENSATEG00000008600) ##22	ENSATEG00000027515	ENSATEG00000008621	ENSATEG00000008845
Siamese fighting fish	MODERN SPECIES	15	qsox1 (ENSBSLG00000002125)	lhx4 (ENSBSLG00000002126)	acbd6 (ENSBSLG00000002171)	ENSBSLG00000002267	sin3b (ENSBSLG00000002586)	haus5 (ENSBSLG00000003657)	rx1 (ENSBSLG00000003704)	MATK (ENSBSLG00000003990)	ZFR2 (ENSBSLG00000004412)	ATCAY (ENSBSLG00000004420)	mibp (ENSBSLG00000004430)	loxl5a (ENSBSLG00000004761)	mydgf (ENSBSLG00000004784)	tnfaip8l1 (ENSBSLG00000004816)	cope (ENSBSLG00000004968) #21	CERS1 (ENSBSLG00000005634) #22	ncln (ENSBSLG00000005664)	s1pr4 (ENSBSLG00000005801)	MYO9B (ENSBSLG00000006954)	use1 (ENSBSLG00000008645)	insrb (ENSBSLG00000008798)	ARHGEF18 (ENSBSLG00000015047)	enc3 (ENSBSLG00000015153)	timm13 (ENSBSLG00000015179)	ENSBSLG00000015212	lsm7 (ENSBSLG00000015283)	cers4a (ENSBSLG00000015343) ##22	CTXN1 (ENSBSLG00000016020)	timm44 (ENSBSLG00000016038)	hnrnpm (ENSBSLG00000016324)	dmap1 (ENSBSLG00000016340)
Zig-zag eel	MODERN SPECIES	18	LHX4 (ENSMAMG00000004577)	acbd6 (ENSMAMG00000004599)	ENSMAMG00000004631	ENSMAMG00000004726	ENSMAMG00000004822	ENSMAMG00000004858	rx1 (ENSMAMG00000025789)	MATK (ENSMAMG00000004909)	ENSMAMG00000004951	ATCAY (ENSMAMG00000024775)	mibp (ENSMAMG00000004982)	loxl5a (ENSMAMG00000005002)	mydgf (ENSMAMG00000005019)	tnfaip8l1 (ENSMAMG00000026836)	ENSMAMG00000005043 #21	ENSMAMG00000005082 #22	ncln (ENSMAMG00000005097)	s1pr4 (ENSMAMG00000005150)	ENSMAMG00000005167	use1 (ENSMAMG00000005262)	insrb (ENSMAMG00000005288)	ENSMAMG00000005328	enc3 (ENSMAMG00000005355)	timm13 (ENSMAMG00000026432)	ENSMAMG00000005370	lsm7 (ENSMAMG00000005410)	ENSMAMG00000005414	cers4a (ENSMAMG00000005432) ##22	ENSMAMG00000005472	ENSMAMG00000005576	timm44 (ENSMAMG00000005591)
Carangaria	ANCESTRAL SPECIES	7	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Pleuronectoidei	ANCESTRAL SPECIES	30	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000155273	ENSGT01030000234515.a.b.b.a ##22	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595
Turbot	MODERN SPECIES	3	lhx4 (ENSSMAG00000005678)	acbd6 (ENSSMAG00000005658)	xpr1a (ENSSMAG00000005615)	ENSSMAG00000005564	ENSSMAG00000005507	ENSSMAG00000005482	rx1 (ENSSMAG00000033028)	MATK (ENSSMAG00000005461)	ENSSMAG00000005377	ATCAY (ENSSMAG00000005319)	mibp (ENSSMAG00000005298)	loxl5a (ENSSMAG00000005285)	mydgf (ENSSMAG00000005280)	tnfaip8l1 (ENSSMAG00000031021)	ENSSMAG00000005216 #21	ENSSMAG00000005198 #22	ncln (ENSSMAG00000005136)	s1pr4 (ENSSMAG00000005123)	ENSSMAG00000004758	use1 (ENSSMAG00000004710)	insrb (ENSSMAG00000004638)	ENSSMAG00000029449	ENSSMAG00000004408	enc3 (ENSSMAG00000004360)	timm13 (ENSSMAG00000004298)	ENSSMAG00000004210	lsm7 (ENSSMAG00000004195)	ENSSMAG00000004184	ENSSMAG00000004045 ##22	ENSSMAG00000022554	ENSSMAG00000004030
Tongue sole	MODERN SPECIES	11	lhx4 (ENSCSEG00000013892)	acbd6 (ENSCSEG00000013900)	xpr1a (ENSCSEG00000013909)	sin3b (ENSCSEG00000013930)	haus5 (ENSCSEG00000013946)	ENSCSEG00000013973	rx1 (ENSCSEG00000013987)	MATK (ENSCSEG00000013992)	ZFR2 (ENSCSEG00000013995)	ATCAY (ENSCSEG00000014013)	mibp (ENSCSEG00000014027)	loxl5a (ENSCSEG00000014044)	mydgf (ENSCSEG00000014049)	tnfaip8l1 (ENSCSEG00000014057)	cope (ENSCSEG00000014066) #21	CERS1 (ENSCSEG00000014081) #22	ncln (ENSCSEG00000014102)	s1pr4 (ENSCSEG00000014130)	ENSCSEG00000014133	use1 (ENSCSEG00000014138)	insrb (ENSCSEG00000014148)	ENSCSEG00000014175	ENSCSEG00000014205	psmd1 (ENSCSEG00000014215)	htr2b (ENSCSEG00000014247)	her6 (ENSCSEG00000014253)	opa1 (ENSCSEG00000014266)	ATP13A3 (ENSCSEG00000014315)	ENSCSEG00000014356	SLC44A5 (ENSCSEG00000014391)	ENSCSEG00000014474
Carangaria_A	ANCESTRAL SPECIES	3	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Seriola	ANCESTRAL SPECIES		ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Greater amberjack	MODERN SPECIES		lhx4 (ENSSDUG00000000595)	acbd6 (ENSSDUG00000000625)	xpr1a (ENSSDUG00000000643)	sin3b (ENSSDUG00000000743)	haus5 (ENSSDUG00000000848)	ENSSDUG00000000862	rx1 (ENSSDUG00000000875)	MATK (ENSSDUG00000000901)	ENSSDUG00000000962	ATCAY (ENSSDUG00000000987)	mibp (ENSSDUG00000001058)	loxl5a (ENSSDUG00000001113)	mydgf (ENSSDUG00000001272)	tnfaip8l1 (ENSSDUG00000001302)	cope (ENSSDUG00000001320) #21	CERS1 (ENSSDUG00000001367) #22	ncln (ENSSDUG00000001384)	s1pr4 (ENSSDUG00000001452)	MYO9B (ENSSDUG00000001469)	use1 (ENSSDUG00000001559)	insrb (ENSSDUG00000001593)	ARHGEF18 (ENSSDUG00000001719)	enc3 (ENSSDUG00000001809)	timm13 (ENSSDUG00000001818)	ENSSDUG00000001835	lsm7 (ENSSDUG00000001863)	ENSSDUG00000001881	cers4a (ENSSDUG00000001904) ##22	fbn2b (ENSSDUG00000001962)	CTXN1 (ENSSDUG00000002111)	ENSSDUG00000002122
Yellowtail amberjack	MODERN SPECIES	2246				sin3b (ENSSLDG00000015568)	haus5 (ENSSLDG00000015601)	ENSSLDG00000015631	rx1 (ENSSLDG00000015670)	MATK (ENSSLDG00000015693)	ZFR2 (ENSSLDG00000015732)	ATCAY (ENSSLDG00000015767)	mibp (ENSSLDG00000015793)	loxl5a (ENSSLDG00000015828)	mydgf (ENSSLDG00000015838)	tnfaip8l1 (ENSSLDG00000015851)	cope (ENSSLDG00000015863) #21	CERS1 (ENSSLDG00000015902) #22	ncln (ENSSLDG00000015927)	s1pr4 (ENSSLDG00000016017)	ENSSLDG00000016034	use1 (ENSSLDG00000016051)	insrb (ENSSLDG00000016088)	ARHGEF18 (ENSSLDG00000016133)	enc3 (ENSSLDG00000016197)	ENSSLDG00000016245	timm13 (ENSSLDG00000016325)	lsm7 (ENSSLDG00000016339)	ENSSLDG00000016352	cers4a (ENSSLDG00000016360) ##22	fbn2b (ENSSLDG00000016403)	CTXN1 (ENSSLDG00000016545)	timm44 (ENSSLDG00000016573)
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	1869																CERS1 (ENSLCAG00010026223) #22
Barramundi perch	MODERN SPECIES	43	ENSLCAG00010025365	qsox1 (ENSLCAG00010025349)	lhx4 (ENSLCAG00010025342)	acbd6 (ENSLCAG00010025337)	xpr1a (ENSLCAG00010025321)	sin3b (ENSLCAG00010025277)	ENSLCAG00010025164	MATK (ENSLCAG00010025123)	ZFR2 (ENSLCAG00010025113)	ATCAY (ENSLCAG00010025107)	mibp (ENSLCAG00010025100)	loxl5a (ENSLCAG00010025096)	mydgf (ENSLCAG00010025091)	tnfaip8l1 (ENSLCAG00010025088)	cope (ENSLCAG00010025076) #21	CERS1 (ENSLCAG00010025066) #22	ncln (ENSLCAG00010025034)	s1pr4 (ENSLCAG00010025015)	MYO9B (ENSLCAG00010024751)	use1 (ENSLCAG00010024635)	insrb (ENSLCAG00010024130)	ARHGEF18 (ENSLCAG00010023913)	enc3 (ENSLCAG00010023905)	timm13 (ENSLCAG00010023902)	ENSLCAG00010023898	ENSLCAG00010023891	lsm7 (ENSLCAG00010023883)	ENSLCAG00010023879	cers4a (ENSLCAG00010023874) ##22	fbn2b (ENSLCAG00010023593)	CTXN1 (ENSLCAG00010023508)
Ovalentaria	ANCESTRAL SPECIES	9	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000181720	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT01030000235960	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A
Atherinomorphae	ANCESTRAL SPECIES	7	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000181720	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A
Cyprinodontiformes	ANCESTRAL SPECIES	7	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000181720	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A
Aplocheiloidei	ANCESTRAL SPECIES	3	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Mangrove rivulus	MODERN SPECIES	8	qsox1 (ENSKMAG00000022222)	lhx4 (ENSKMAG00000022219)	acbd6 (ENSKMAG00000022218)	xpr1a (ENSKMAG00000022217)	sin3b (ENSKMAG00000022211)	rx1 (ENSKMAG00000022207)	ENSKMAG00000022204	MATK (ENSKMAG00000022203)	ZFR2 (ENSKMAG00000022201)	ATCAY (ENSKMAG00000022198)	mibp (ENSKMAG00000022191)	loxl5a (ENSKMAG00000022188)	mydgf (ENSKMAG00000022184)	tnfaip8l1 (ENSKMAG00000022183)	cope (ENSKMAG00000022180) #21	CERS1 (ENSKMAG00000022179) #22	ncln (ENSKMAG00000022175)	s1pr4 (ENSKMAG00000022170)	MYO9B (ENSKMAG00000022167)	use1 (ENSKMAG00000022165)	insrb (ENSKMAG00000022163)	ARHGEF18 (ENSKMAG00000022161)	enc3 (ENSKMAG00000022158)	timm13 (ENSKMAG00000022156)	ENSKMAG00000022153	ENSKMAG00000022152	lsm7 (ENSKMAG00000022151)	ENSKMAG00000022150	cers4a (ENSKMAG00000022149) ##22	fbn2b (ENSKMAG00000022145)	CTXN1 (ENSKMAG00000022142)
Turquoise killifish	MODERN SPECIES	1626	ACBD6 (ENSNFUG00015025474)	XPR1 (ENSNFUG00015025473)	SIN3B (ENSNFUG00015025472)	HAUS5 (ENSNFUG00015025471)	rx1 (ENSNFUG00015025470)	ENSNFUG00015025469	MATK (ENSNFUG00015025468)	ENSNFUG00015025467	ATCAY (ENSNFUG00015025466)	NMRK2 (ENSNFUG00015025465)	loxl5a (ENSNFUG00015025464)	ENSNFUG00015025463	mydgf (ENSNFUG00015025462)	TNFAIP8 (ENSNFUG00015025461)	cope (ENSNFUG00015025460) #21	CERS1 (ENSNFUG00015025459) #22	ncln (ENSNFUG00015025458)	ENSNFUG00015025455	s1pr4 (ENSNFUG00015025454)	MYO9B (ENSNFUG00015025453)	USE1 (ENSNFUG00015025452)	ENSNFUG00015025451	INSRB (ENSNFUG00015025450)	ARHGEF18 (ENSNFUG00015025449)	ENC1L (ENSNFUG00015025447)	timm13 (ENSNFUG00015025446)	ENSNFUG00015025445	ENSNFUG00015025444	lsm7 (ENSNFUG00015025443)	ENSNFUG00015025442	cers4a (ENSNFUG00015025441) ##22
Cyprinodontoidei	ANCESTRAL SPECIES	10	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000181720	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Poeciliinae	ANCESTRAL SPECIES	7	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.b	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Poecilia	ANCESTRAL SPECIES	1	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.b	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
NAME_6	ANCESTRAL SPECIES	19	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.b	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Sailfin molly	MODERN SPECIES	414												loxl5a (ENSPLAG00000001058)	mydgf (ENSPLAG00000001052)	tnfaip8l1 (ENSPLAG00000001049)	cope (ENSPLAG00000001046) #21	CERS1 (ENSPLAG00000001043) #22	ncln (ENSPLAG00000001042)	s1pr4 (ENSPLAG00000001037)	MYO9B (ENSPLAG00000001033)	use1 (ENSPLAG00000001028)	ENSPLAG00000001026
Amazon molly	MODERN SPECIES	303	acbd6 (ENSPFOG00000008788)	ENSPFOG00000009233	sin3b (ENSPFOG00000009364)	lhx4 (ENSPFOG00000009126)	haus5 (ENSPFOG00000009910)	rx1 (ENSPFOG00000009970)	MATK (ENSPFOG00000021697)	ZFR2 (ENSPFOG00000010053)	ATCAY (ENSPFOG00000010457)	mibp (ENSPFOG00000023631)	loxl5a (ENSPFOG00000023637)	loxl5a (ENSPFOG00000010562)	mydgf (ENSPFOG00000010616)	tnfaip8l1 (ENSPFOG00000010668)	cope (ENSPFOG00000010691) #21	CERS1 (ENSPFOG00000010753) #22	ncln (ENSPFOG00000010844)	s1pr4 (ENSPFOG00000019999)	MYO9B (ENSPFOG00000011070)	use1 (ENSPFOG00000011442)	insrb (ENSPFOG00000011513)	ENSPFOG00000012136	ARHGEF18 (ENSPFOG00000012251)	enc3 (ENSPFOG00000012378)	ENSPFOG00000020000	timm13 (ENSPFOG00000012405)	ENSPFOG00000012424	lsm7 (ENSPFOG00000012467)	ENSPFOG00000012496	cers4a (ENSPFOG00000012524) ##22	fbn2b (ENSPFOG00000012783)
Guppy	MODERN SPECIES	456	acbd6 (ENSPREG00000017881)	ENSPREG00000017843	sin3b (ENSPREG00000017772)	haus5 (ENSPREG00000017687)	rx1 (ENSPREG00000017666)	ENSPREG00000017656	MATK (ENSPREG00000017635)	ZFR2 (ENSPREG00000017580)	ATCAY (ENSPREG00000017565)	mibp (ENSPREG00000017542)	loxl5a (ENSPREG00000017527)	mydgf (ENSPREG00000017513)	tnfaip8l1 (ENSPREG00000017508)	cope (ENSPREG00000017488) #21	ENSPREG00000017472	CERS1 (ENSPREG00000017449) #22	ncln (ENSPREG00000017424)	s1pr4 (ENSPREG00000017375)	MYO9B (ENSPREG00000017023)	use1 (ENSPREG00000016894)	ENSPREG00000016870	ARHGEF18 (ENSPREG00000016800)	enc3 (ENSPREG00000016753)	timm13 (ENSPREG00000016743)	ENSPREG00000016734	lsm7 (ENSPREG00000016718)	ENSPREG00000016703	cers4a (ENSPREG00000016605) ##22	ENSPREG00000016552	ENSPREG00000016329	CTXN1 (ENSPREG00000016283)
Platyfish	MODERN SPECIES	23	qsox1 (ENSXMAG00000018978)	lhx4 (ENSXMAG00000018968)	acbd6 (ENSXMAG00000018958)	ENSXMAG00000018903	sin3b (ENSXMAG00000018864)	haus5 (ENSXMAG00000018862)	rx1 (ENSXMAG00000018858)	MATK (ENSXMAG00000018839)	ENSXMAG00000018784	ATCAY (ENSXMAG00000023988)	mibp (ENSXMAG00000018750)	loxl5a (ENSXMAG00000022649)	mydgf (ENSXMAG00000028233)	tnfaip8l1 (ENSXMAG00000018738)	cope (ENSXMAG00000018730) #21	CERS1 (ENSXMAG00000018726) #22	ncln (ENSXMAG00000018708)	s1pr4 (ENSXMAG00000021378)	MYO9B (ENSXMAG00000018704)	use1 (ENSXMAG00000022582)	insrb (ENSXMAG00000018648)	ARHGEF18 (ENSXMAG00000018641)	enc3 (ENSXMAG00000018635)	timm13 (ENSXMAG00000022411)	ENSXMAG00000018631	lsm7 (ENSXMAG00000018630)	ENSXMAG00000018626	cers4a (ENSXMAG00000028396) ##22	ENSXMAG00000029730	ENSXMAG00000021484	ENSXMAG00000022955
NAME_4	ANCESTRAL SPECIES	17	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000181720	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000155273	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Sheepshead minnow	MODERN SPECIES	142	qsox1 (ENSCVAG00000022370)	lhx4 (ENSCVAG00000022366)	acbd6 (ENSCVAG00000022350)	ENSCVAG00000022339	sin3b (ENSCVAG00000022303)	haus5 (ENSCVAG00000022215)	rx1 (ENSCVAG00000022203)	MATK (ENSCVAG00000022176)	ENSCVAG00000022133	ATCAY (ENSCVAG00000022114)	mibp (ENSCVAG00000022110)	loxl5a (ENSCVAG00000022083)	mydgf (ENSCVAG00000021774)	tnfaip8l1 (ENSCVAG00000021771)	cope (ENSCVAG00000021751) #21	CERS1 (ENSCVAG00000021722) #22	ncln (ENSCVAG00000021714)	s1pr4 (ENSCVAG00000021655)	MYO9B (ENSCVAG00000021647)	use1 (ENSCVAG00000021584)	insrb (ENSCVAG00000021557)	ENSCVAG00000021533	ARHGEF18 (ENSCVAG00000021523)	enc3 (ENSCVAG00000021503)	timm13 (ENSCVAG00000021490)	ENSCVAG00000021461	lsm7 (ENSCVAG00000021091)	ENSCVAG00000021074	cers4a (ENSCVAG00000021056) ##22	fbn2b (ENSCVAG00000021044)	CTXN1 (ENSCVAG00000020871)
Mummichog	MODERN SPECIES	2394	qsox1 (ENSFHEG00000005136)	lhx4 (ENSFHEG00000005148)	acbd6 (ENSFHEG00000005180)	ENSFHEG00000005222	sin3b (ENSFHEG00000000604)	ENSFHEG00000005339	rx1 (ENSFHEG00000005391)	MATK (ENSFHEG00000005404)	ZFR2 (ENSFHEG00000005422)	ATCAY (ENSFHEG00000005510)	mibp (ENSFHEG00000005533)	loxl5a (ENSFHEG00000005538)	mydgf (ENSFHEG00000005541)	tnfaip8l1 (ENSFHEG00000005552)	cope (ENSFHEG00000005633) #21	CERS1 (ENSFHEG00000000880) #22	ncln (ENSFHEG00000005759)	s1pr4 (ENSFHEG00000005776)	MYO9B (ENSFHEG00000005893)	ENSFHEG00000005910	use1 (ENSFHEG00000005919)	insrb (ENSFHEG00000005985)	ENSFHEG00000005998	ARHGEF18 (ENSFHEG00000006212)	enc3 (ENSFHEG00000006243)	timm13 (ENSFHEG00000006257)	ENSFHEG00000006276	ENSFHEG00000006334	lsm7 (ENSFHEG00000006349)	ENSFHEG00000006356	cers4a (ENSFHEG00000006377) ##22
Oryzias	ANCESTRAL SPECIES	5	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a.h	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT01030000235960	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Oryzias_b	ANCESTRAL SPECIES	15	ENSGT00940000157906	ENSGT00940000157458	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00940000163467.a.b.b.a.a.i.a	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a.h	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Javanese ricefish	MODERN SPECIES	18	lhx4 (ENSOJAG00000014671)	acbd6 (ENSOJAG00000014722)	ENSOJAG00000014753	sin3b (ENSOJAG00000014829)	haus5 (ENSOJAG00000015139)	ENSOJAG00000015158	rx1 (ENSOJAG00000015203)	MATK (ENSOJAG00000015293)	ENSOJAG00000015984	ATCAY (ENSOJAG00000015997)	mibp (ENSOJAG00000016002)	loxl5a (ENSOJAG00000016014)	mydgf (ENSOJAG00000016018)	tnfaip8l1 (ENSOJAG00000016024)	cope (ENSOJAG00000016051) #21	CERS1 (ENSOJAG00000016185) #22	ncln (ENSOJAG00000016226)	s1pr4 (ENSOJAG00000016869)	use1 (ENSOJAG00000018599)	insrb (ENSOJAG00000018677)	ENSOJAG00000019716	enc3 (ENSOJAG00000019874)	timm13 (ENSOJAG00000019883)	ENSOJAG00000019896	ENSOJAG00000019908	ENSOJAG00000019919	lsm7 (ENSOJAG00000019931)	cers4a (ENSOJAG00000019952) ##22	fbn2b (ENSOJAG00000020033)	CTXN1 (ENSOJAG00000021054)	timm44 (ENSOJAG00000021063)
Indian medaka	MODERN SPECIES	13	lhx4 (ENSOMEG00000011334)	acbd6 (ENSOMEG00000011436)	ENSOMEG00000011515	sin3b (ENSOMEG00000011598)	haus5 (ENSOMEG00000011706)	ENSOMEG00000011765	rx1 (ENSOMEG00000011791)	MATK (ENSOMEG00000000282)	ENSOMEG00000000293	ATCAY (ENSOMEG00000012034)	mibp (ENSOMEG00000012080)	loxl5a (ENSOMEG00000012102)	mydgf (ENSOMEG00000012113)	tnfaip8l1 (ENSOMEG00000012123)	cope (ENSOMEG00000012167) #21	CERS1 (ENSOMEG00000012203) #22	ncln (ENSOMEG00000012264)	s1pr4 (ENSOMEG00000012290)	ENSOMEG00000012309	use1 (ENSOMEG00000012330)	insrb (ENSOMEG00000000314)	ARHGEF18 (ENSOMEG00000012588)	enc3 (ENSOMEG00000012634)	timm13 (ENSOMEG00000012645)	ENSOMEG00000012764	lsm7 (ENSOMEG00000012806)	ENSOMEG00000012817	cers4a (ENSOMEG00000012858) ##22	ENSOMEG00000012879	ENSOMEG00000012891	ENSOMEG00000012914
Oryzias_a	ANCESTRAL SPECIES	24	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148.o	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a.h	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b
Chinese medaka	MODERN SPECIES	952																CERS1 (ENSOSIG00000007813) #22	ncln (ENSOSIG00000007766)	s1pr4 (ENSOSIG00000007763)	ENSOSIG00000007564	use1 (ENSOSIG00000007543)	insrb (ENSOSIG00000007494)
Japanese Medaka HdrR	MODERN SPECIES	18	haus5 (ENSORLG00000017396)	rx1 (ENSORLG00000017398)	MATK (ENSORLG00000017415)	ENSORLG00000017438	ATCAY (ENSORLG00000017449)	mibp (ENSORLG00000018531)	loxl5a (ENSORLG00000023435)	mydgf (ENSORLG00000025868)	ENSORLG00000029205	ENSORLG00000029715	tnfaip8l1 (ENSORLG00000030570)	ENSORLG00000023478	ENSORLG00000027936	ENSORLG00000021880	cope (ENSORLG00000017456) #21	CERS1 (ENSORLG00000017460) #22	ncln (ENSORLG00000017473)	s1pr4 (ENSORLG00000017476)	ENSORLG00000029466	use1 (ENSORLG00000019519)	ENSORLG00000027043	ENSORLG00000018568	ENSORLG00000023652	ENSORLG00000029332
Ovalentaria_B	ANCESTRAL SPECIES	8	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Cichlidae	ANCESTRAL SPECIES	17	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	10	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Nile tilapia	MODERN SPECIES	14	acbd6 (ENSONIG00000001913)	xpr1a (ENSONIG00000001906)	ENSONIG00000035396	sin3b (ENSONIG00000001898)	haus5 (ENSONIG00000001892)	ENSONIG00000001886	rx1 (ENSONIG00000034450)	MATK (ENSONIG00000001878)	ZFR2 (ENSONIG00000001871)	ATCAY (ENSONIG00000001868)	mibp (ENSONIG00000001861)	loxl5a (ENSONIG00000029087)	mydgf (ENSONIG00000031446)	tnfaip8l1 (ENSONIG00000037367)	cope (ENSONIG00000001847) #21	CERS1 (ENSONIG00000001845) #22	ncln (ENSONIG00000001833)	ENSONIG00000036656	s1pr4 (ENSONIG00000001832)	MYO9B (ENSONIG00000001830)	use1 (ENSONIG00000001829)	insrb (ENSONIG00000001811)	ARHGEF18 (ENSONIG00000001810)	enc3 (ENSONIG00000001808)	timm13 (ENSONIG00000031033)	ENSONIG00000001805	ENSONIG00000001803	lsm7 (ENSONIG00000001801)	cers4a (ENSONIG00000001795) ##22	CTXN1 (ENSONIG00000020816)	timm44 (ENSONIG00000001772)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	26	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b
Haplochromini	ANCESTRAL SPECIES	16	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.u.a	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Haplochromini_A	ANCESTRAL SPECIES	15	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.u.a	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Haplochromini_B	ANCESTRAL SPECIES	10	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00940000164519.c.b	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.u.a	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a
Eastern happy	MODERN SPECIES	14	qsox1 (ENSACLG00000022542)	lhx4 (ENSACLG00000022518)	acbd6 (ENSACLG00000022510)	ENSACLG00000022358	sin3b (ENSACLG00000022210)	ENSACLG00000022076	rx1 (ENSACLG00000022052)	MATK (ENSACLG00000022027)	ZFR2 (ENSACLG00000021987)	ATCAY (ENSACLG00000021970)	mibp (ENSACLG00000021925)	ENSACLG00000021912	mydgf (ENSACLG00000021835)	tnfaip8l1 (ENSACLG00000021825)	cope (ENSACLG00000021749) #21	CERS1 (ENSACLG00000021733) #22	ncln (ENSACLG00000021634)	s1pr4 (ENSACLG00000021610)	MYO9B (ENSACLG00000021513)	use1 (ENSACLG00000021469)	insrb (ENSACLG00000021318)	ARHGEF18 (ENSACLG00000021252)	enc3 (ENSACLG00000021240)	ENSACLG00000021213	timm13 (ENSACLG00000021201)	ENSACLG00000021120	ENSACLG00000021095	lsm7 (ENSACLG00000021021)	cers4a (ENSACLG00000020931) ##22	fbn2b (ENSACLG00000020763)	CTXN1 (ENSACLG00000020707)
Zebra mbuna	MODERN SPECIES	1105	ENSMZEG00005002907	nexn (ENSMZEG00005002929)	tab3 (ENSMZEG00005002999)	tmem47 (ENSMZEG00005003009)	prrg1 (ENSMZEG00005003035)	cpox (ENSMZEG00005003050)	ENSMZEG00005003074	P3H2 (ENSMZEG00005003110)	ENSMZEG00005003129	ENSMZEG00005003137	ENSMZEG00005003161	ENSMZEG00005003190	mydgf (ENSMZEG00005003213)	tnfaip8l1 (ENSMZEG00005003222)	cope (ENSMZEG00005003240) #21	CERS1 (ENSMZEG00005003283) #22	ncln (ENSMZEG00005003297)	s1pr4 (ENSMZEG00005003380)	MYO9B (ENSMZEG00005003403)	use1 (ENSMZEG00005003504)	ENSMZEG00005003531	ENSMZEG00005003564	mibp (ENSMZEG00005003596)	ATCAY (ENSMZEG00005003606)	ZFR2 (ENSMZEG00005003632)	MATK (ENSMZEG00005003665)	rx1 (ENSMZEG00005003728)	ENSMZEG00005003761	haus5 (ENSMZEG00005003793)	sin3b (ENSMZEG00005003816)	ENSMZEG00005003865
P. nyererei	MODERN SPECIES	478												loxl5a (ENSPNYG00000007689)	mydgf (ENSPNYG00000007672)	tnfaip8l1 (ENSPNYG00000007660)	cope (ENSPNYG00000007615) #21	CERS1 (ENSPNYG00000007584) #22	ncln (ENSPNYG00000007548)	s1pr4 (ENSPNYG00000007509)	MYO9B (ENSPNYG00000007412)	use1 (ENSPNYG00000007375)	insrb (ENSPNYG00000007318)	ARHGEF18 (ENSPNYG00000007253)	enc3 (ENSPNYG00000007231)	timm13 (ENSPNYG00000007215)	ENSPNYG00000006986	lsm7 (ENSPNYG00000006938)	ENSPNYG00000006923	cers4a (ENSPNYG00000006898) ##22	fbn2b (ENSPNYG00000006768)	CTXN1 (ENSPNYG00000006736)	timm44 (ENSPNYG00000006701)
Burton s mouthbrooder	MODERN SPECIES	394	tafazzin (ENSHBUG00000000138)	ENSHBUG00000005448	ENSHBUG00000005401	sin3b (ENSHBUG00000005297)	haus5 (ENSHBUG00000005230)	ENSHBUG00000005211	rx1 (ENSHBUG00000005148)	MATK (ENSHBUG00000005141)	ZFR2 (ENSHBUG00000005126)	ATCAY (ENSHBUG00000005116)	mibp (ENSHBUG00000005101)	loxl5a (ENSHBUG00000005093)	mydgf (ENSHBUG00000005082)	tnfaip8l1 (ENSHBUG00000005068)	cope (ENSHBUG00000005056) #21	CERS1 (ENSHBUG00000005009) #22	ncln (ENSHBUG00000005001)	s1pr4 (ENSHBUG00000004919)	MYO9B (ENSHBUG00000004905)	use1 (ENSHBUG00000004811)	insrb (ENSHBUG00000004766)	ARHGEF18 (ENSHBUG00000004734)	enc3 (ENSHBUG00000004684)	ENSHBUG00000004671	ENSHBUG00000004650	timm13 (ENSHBUG00000004633)	lsm7 (ENSHBUG00000004616)	ENSHBUG00000004610	cers4a (ENSHBUG00000004592) ##22	ENSHBUG00000000724	ENSHBUG00000023592
Lyretail cichlid	MODERN SPECIES	390	acbd6 (ENSNBRG00000014532)	ENSNBRG00000014578	ENSNBRG00000014605	sin3b (ENSNBRG00000014622)	haus5 (ENSNBRG00000014691)	ENSNBRG00000014778	rx1 (ENSNBRG00000014827)	MATK (ENSNBRG00000014846)	ZFR2 (ENSNBRG00000014888)	ATCAY (ENSNBRG00000014938)	mibp (ENSNBRG00000015017)	loxl5a (ENSNBRG00000015111)	mydgf (ENSNBRG00000015184)	tnfaip8l1 (ENSNBRG00000015196)	cope (ENSNBRG00000015227) #21	ENSNBRG00000015253 #22	ncln (ENSNBRG00000015281)	s1pr4 (ENSNBRG00000015337)	ENSNBRG00000015344	use1 (ENSNBRG00000015351)	ENSNBRG00000015369	insrb (ENSNBRG00000015391)	ARHGEF18 (ENSNBRG00000015464)	enc3 (ENSNBRG00000015614)	timm13 (ENSNBRG00000015631)	ENSNBRG00000015708	ENSNBRG00000015760	lsm7 (ENSNBRG00000015770)	ENSNBRG00000015780	cers4a (ENSNBRG00000015790) ##22	ENSNBRG00000015836
Midas cichlid	MODERN SPECIES	595	lhx4 (ENSACIG00000007782)	acbd6 (ENSACIG00000007757)	ENSACIG00000007715	sin3b (ENSACIG00000007664)	haus5 (ENSACIG00000007621)	ENSACIG00000007589	rx1 (ENSACIG00000007581)	MATK (ENSACIG00000007554)	ZFR2 (ENSACIG00000007508)	ATCAY (ENSACIG00000007378)	mibp (ENSACIG00000007145)	loxl5a (ENSACIG00000007031)	mydgf (ENSACIG00000006994)	tnfaip8l1 (ENSACIG00000006979)	cope (ENSACIG00000006952) #21	CERS1 (ENSACIG00000006918) #22	ncln (ENSACIG00000006875)	s1pr4 (ENSACIG00000006847)	ENSACIG00000006835	ENSACIG00000006823	use1 (ENSACIG00000006802)	insrb (ENSACIG00000006754)	ENSACIG00000006645	ENSACIG00000006631	enc3 (ENSACIG00000006623)	timm13 (ENSACIG00000006612)	ENSACIG00000006594	ENSACIG00000006578	ENSACIG00000006564	lsm7 (ENSACIG00000006498)
Pomacentridae	ANCESTRAL SPECIES	123	ENSGT00940000157458	ENSGT00940000164519.c.b	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.w.a	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c
Bicolor damselfish	MODERN SPECIES	936														tnfaip8l1 (ENSSPAG00000006031)	cope (ENSSPAG00000006011) #21	CERS1 (ENSSPAG00000005980) #22	ncln (ENSSPAG00000005931)	s1pr4 (ENSSPAG00000005907)	MYO9B (ENSSPAG00000005822)	use1 (ENSSPAG00000005800)	INSR (ENSSPAG00000005776)
Pomacentridae_A	ANCESTRAL SPECIES	121	ENSGT00940000157458	ENSGT00940000164519.c.b	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.w.a	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c
Spiny chromis	MODERN SPECIES	1656														tnfaip8l1 (ENSAPOG00000010185)	cope (ENSAPOG00000010168) #21	CERS1 (ENSAPOG00000010118) #22
Amphiprion	ANCESTRAL SPECIES	148	ENSGT00940000157458	ENSGT00940000164519.c.b	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT00940000156845.w.a	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c
Orange clownfish	MODERN SPECIES	11	acbd6 (ENSAPEG00000002105)	ENSAPEG00000002076	sin3b (ENSAPEG00000001999)	haus5 (ENSAPEG00000001935)	ENSAPEG00000001874	rx1 (ENSAPEG00000001842)	MATK (ENSAPEG00000001792)	ENSAPEG00000001776	ZFR2 (ENSAPEG00000001753)	ATCAY (ENSAPEG00000001611)	mibp (ENSAPEG00000001585)	loxl5a (ENSAPEG00000001487)	mydgf (ENSAPEG00000001472)	tnfaip8l1 (ENSAPEG00000001460)	cope (ENSAPEG00000001420) #21	CERS1 (ENSAPEG00000001401) #22	ncln (ENSAPEG00000001333)	s1pr4 (ENSAPEG00000001323)	MYO9B (ENSAPEG00000001154)	use1 (ENSAPEG00000001100)	insrb (ENSAPEG00000000991)	ENSAPEG00000000805	ENSAPEG00000000734	lsm7 (ENSAPEG00000000694)	ENSAPEG00000000302	timm13 (ENSAPEG00000024511)	enc3 (ENSAPEG00000024507)	enc3 (ENSAPEG00000024496)	timm13 (ENSAPEG00000024492)	ENSAPEG00000024470	ENSAPEG00000024461
Clown anemonefish	MODERN SPECIES	1217																CERS1 (ENSAOCG00000000545) #22	ncln (ENSAOCG00000000550)
Pinecone sodierfish	MODERN SPECIES	18	lhx4 (ENSMMDG00005003863)	acbd6 (ENSMMDG00005003877)	xpr1a (ENSMMDG00005003928)	sin3b (ENSMMDG00005003960)	haus5 (ENSMMDG00005004953)	ENSMMDG00005004961	rx1 (ENSMMDG00005005024)	MATK (ENSMMDG00005005034)	ZFR2 (ENSMMDG00005005052)	ATCAY (ENSMMDG00005005063)	mibp (ENSMMDG00005005145)	loxl5a (ENSMMDG00005005162)	mydgf (ENSMMDG00005005721)	tnfaip8l1 (ENSMMDG00005005726)	cope (ENSMMDG00005005736) #21	CERS1 (ENSMMDG00005005838) #22	ENSMMDG00005005846	ncln (ENSMMDG00005005859)	s1pr4 (ENSMMDG00005005872)	MYO9B (ENSMMDG00005006005)	use1 (ENSMMDG00005010388)	insrb (ENSMMDG00005010402)	ARHGEF18 (ENSMMDG00005010427)	enc3 (ENSMMDG00005010431)	timm13 (ENSMMDG00005010433)	ENSMMDG00005010439	lsm7 (ENSMMDG00005010441)	cers4a (ENSMMDG00005010450) ##22	fbn2b (ENSMMDG00005010538)	CTXN1 (ENSMMDG00005011180)	timm44 (ENSMMDG00005011188)
Cod	MODERN SPECIES	3	ENSGMOG00000034771	qsox1 (ENSGMOG00000013748)	lhx4 (ENSGMOG00000033417)	acbd6 (ENSGMOG00000013721)	xpr1a (ENSGMOG00000013694)	ENSGMOG00000013649	ENSGMOG00000013619	rx1 (ENSGMOG00000013612)	ENSGMOG00000013588	ENSGMOG00000013573	mibp (ENSGMOG00000013566)	loxl5a (ENSGMOG00000013541)	ENSGMOG00000026102	tnfaip8l1 (ENSGMOG00000013529)	ENSGMOG00000013512 #21	ENSGMOG00000013496 #22	ncln (ENSGMOG00000013479)	s1pr4 (ENSGMOG00000013478)	ENSGMOG00000013427	use1 (ENSGMOG00000013419)	insrb (ENSGMOG00000013387)	ENSGMOG00000013360	enc3 (ENSGMOG00000013346)	timm13 (ENSGMOG00000025635)	ENSGMOG00000034913	lsm7 (ENSGMOG00000024901)	ENSGMOG00000035622	fbn2b (ENSGMOG00000009755)	ENSGMOG00000019896	ENSGMOG00000023674	timm44 (ENSGMOG00000009739)
Protacanthopterygii	ANCESTRAL SPECIES	13	ENSGT00940000164495.c.b	ENSGT00940000155438.b	ENSGT00390000012078.a.a	ENSGT00950000182915.b.b.a.b.c.a	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478 #21	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.oc	ENSGT00390000000312	ENSGT00950000182928.B.d.b	ENSGT00730000110872.b.cb	ENSGT00940000158154	ENSGT00940000161593	ENSGT00940000156442	ENSGT00390000018718	ENSGT00940000155941.A	ENSGT00950000182904.a.b.b.b	ENSGT00390000012482	ENSGT00940000159489	ENSGT00940000166579
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	30	ENSGT00940000164495.c.b.d	ENSGT00940000155438.b.v	ENSGT00390000012078.a.a.d	ENSGT00950000182915.b.b.a.b.c.a.b	ENSGT00390000002505	ENSGT00730000111147.l	ENSGT00940000163917.a.a.b	ENSGT00940000160775.h	ENSGT00940000162148.s.b	ENSGT00940000158364.b.d	ENSGT00940000165007.b.d	ENSGT00940000154779.a.a.d	ENSGT00390000000777.e.b	ENSGT00390000003488.a.b.a.e	ENSGT00390000003478.k #21	ENSGT01030000234515.b.k #22	ENSGT00500000044945.a.c	ENSGT01050000244887.B.f	ENSGT00940000156845.oc.a.a	ENSGT00390000000312.m.a	ENSGT00950000182928.B.d.b.r	ENSGT00730000110872.b.cb.c	ENSGT00940000158154.c	ENSGT00940000161593.c	ENSGT00940000156442.f	ENSGT00940000155941.A.m.b	ENSGT00950000182904.a.b.b.b.b	ENSGT00390000012482.h	ENSGT00940000159489	ENSGT00940000166579	ENSGT00940000159134.m
Huchen	MODERN SPECIES	469																CERS1 (ENSHHUG00000048742) #22	ncln (ENSHHUG00000048711)	s1pr4 (ENSHHUG00000048704)	MYO9B (ENSHHUG00000048653)	ENSHHUG00000048629	CTH (ENSHHUG00000048618)	ankrd13c (ENSHHUG00000048597)	srsf11 (ENSHHUG00000048592)	XXYLT1 (ENSHHUG00000048587)	fam43a (ENSHHUG00000048584)	lsg1 (ENSHHUG00000048575)	ENSHHUG00000048572	ENSHHUG00000048554	ENSHHUG00000048551
Salmoninae_a	ANCESTRAL SPECIES	1	ENSGT00940000164495.c.b.d	ENSGT00940000155438.b.v	ENSGT00390000012078.a.a.d	ENSGT00950000182915.b.b.a.b.c.a.b	ENSGT00390000002505	ENSGT00730000111147.l	ENSGT00940000163917.a.a.b	ENSGT00940000160775.h	ENSGT00940000162148.s.b	ENSGT00940000158364.b.d	ENSGT00940000165007.b.d	ENSGT00940000154779.a.a.d	ENSGT00390000000777.e.b	ENSGT00390000003488.a.b.a.e	ENSGT00390000003478.k #21	ENSGT01030000234515.b.k #22	ENSGT00500000044945.a.c	ENSGT01050000244887.B.f	ENSGT00940000156845.oc.a.a	ENSGT00390000000312.m.a	ENSGT00950000182928.B.d.b.r	ENSGT00730000110872.b.cb.c	ENSGT00940000158154.c	ENSGT00940000161593.c	ENSGT00940000156442.f	ENSGT00940000155941.A.m.b	ENSGT00950000182904.a.b.b.b.b	ENSGT00390000012482.h	ENSGT00940000159489	ENSGT00940000166579	ENSGT00940000159134.m
Salmo	ANCESTRAL SPECIES	9	ENSGT00940000164495.c.b.d	ENSGT00940000155438.b.v	ENSGT00390000012078.a.a.d	ENSGT00950000182915.b.b.a.b.c.a.b	ENSGT00390000002505	ENSGT00730000111147.l	ENSGT00940000163917.a.a.b	ENSGT00940000160775.h	ENSGT00940000162148.s.b	ENSGT00940000158364.b.d	ENSGT00940000165007.b.d	ENSGT00940000154779.a.a.d	ENSGT00390000000777.e.b	ENSGT00390000003488.a.b.a.e	ENSGT00390000003478.k #21	ENSGT01030000234515.b.k #22	ENSGT00500000044945.a.c	ENSGT01050000244887.B.f	ENSGT00940000156845.oc.a.a	ENSGT00390000000312.m.a	ENSGT00950000182928.B.d.b.r	ENSGT00730000110872.b.cb.c	ENSGT00940000158154.c	ENSGT00940000161593.c	ENSGT00940000156442.f	ENSGT00940000155941.A.m.b	ENSGT00950000182904.a.b.b.b.b	ENSGT00390000012482.h	ENSGT00940000159489	ENSGT00940000166579	ENSGT00940000159134.m
Atlantic salmon	MODERN SPECIES	7	ENSSSAG00000091652	EPS15L1 (ENSSSAG00000072805)	ENSSSAG00000073163	ENSSSAG00000095797	cherp (ENSSSAG00000073228)	rx1 (ENSSSAG00000122270)	MATK (ENSSSAG00000002734)	ENSSSAG00000073319	ATCAY (ENSSSAG00000002542)	mibp (ENSSSAG00000073335)	loxl5a (ENSSSAG00000073344)	mydgf (ENSSSAG00000073347)	ENSSSAG00000101234	tnfaip8l1 (ENSSSAG00000002453)	ENSSSAG00000073354 #21	ENSSSAG00000105401 #22	ncln (ENSSSAG00000073413)	s1pr4 (ENSSSAG00000119257)	ENSSSAG00000073931	ENSSSAG00000037239	CTH (ENSSSAG00000032650)	ENSSSAG00000081857	ENSSSAG00000037652	SRSF11 (ENSSSAG00000039144)	XXYLT1 (ENSSSAG00000121916)	fam43a (ENSSSAG00000039267)	lsg1 (ENSSSAG00000107240)	ATP13A3 (ENSSSAG00000041338)	KCNN1 (ENSSSAG00000042338)	cc124 (ENSSSAG00000042702)	SLC5A5 (ENSSSAG00000042719)
River trout	MODERN SPECIES	8	klf2a (ENSSTUG00000003873)	EPS15L1 (ENSSTUG00000003770)	rad23ab (ENSSTUG00000003687)	ENSSTUG00000003621	C19orf44 (ENSSTUG00000003605)	cherp (ENSSTUG00000003510)	rx1 (ENSSTUG00000003495)	MATK (ENSSTUG00000002995)	ZFR2 (ENSSTUG00000002901)	ATCAY (ENSSTUG00000002890)	mibp (ENSSTUG00000002878)	loxl5a (ENSSTUG00000002775)	mydgf (ENSSTUG00000002760)	tnfaip8l1 (ENSSTUG00000002752)	cope (ENSSTUG00000002472) #21	CERS1 (ENSSTUG00000002446) #22	ncln (ENSSTUG00000002269)	s1pr4 (ENSSTUG00000001862)	MYO9B (ENSSTUG00000015770)	CTH (ENSSTUG00000015248)	ankrd13c (ENSSTUG00000015024)	srsf11 (ENSSTUG00000014960)	XXYLT1 (ENSSTUG00000014952)	fam43a (ENSSTUG00000014937)	lsg1 (ENSSTUG00000014846)	ATP13A3 (ENSSTUG00000014493)	KCNN1 (ENSSTUG00000014459)	ccdc124 (ENSSTUG00000014454)	slc5a5 (ENSSTUG00000014293)	ENSSTUG00000012516	B3GNT3 (ENSSTUG00000012424)
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00940000157924.h	ENSGT00940000164495.c.b.d	ENSGT00940000155438.b.v	ENSGT00390000012078.a.a.d	ENSGT00950000182915.b.b.a.b.c.a.b	ENSGT00390000002505	ENSGT00730000111147.l	ENSGT00940000163917.a.a.b	ENSGT00940000160775.h	ENSGT00940000162148.s.b	ENSGT00940000158364.b.d	ENSGT00940000154779.a.a.d	ENSGT00390000000777.e.b	ENSGT00390000003488.a.b.a.e	ENSGT00390000003478.k #21	ENSGT01030000234515.b.k #22	ENSGT00500000044945.a.c	ENSGT01050000244887.B.f	ENSGT00940000156845.oc.a.a	ENSGT00940000164178.g	ENSGT00390000000312.m.a	ENSGT00950000182928.B.d.b.r	ENSGT00730000110872.b.cb.c	ENSGT00940000158154.c	ENSGT00940000161593.c	ENSGT00940000156442.f	ENSGT00940000155941.A.m.b	ENSGT00950000182904.a.b.b.b.b	ENSGT00390000012482.h	ENSGT00940000159489	ENSGT00940000166579
Rainbow trout	MODERN SPECIES		AP1M1 (ENSOMYG00000023577)	klf2a (ENSOMYG00000023459)	EPS15L1 (ENSOMYG00000023293)	rad23ab (ENSOMYG00000023129)	calr3a (ENSOMYG00000023017)	ENSOMYG00000022952	cherp (ENSOMYG00000022514)	rx1 (ENSOMYG00000022422)	MATK (ENSOMYG00000022341)	ENSOMYG00000021993	ATCAY (ENSOMYG00000021883)	loxl5a (ENSOMYG00000021840)	mydgf (ENSOMYG00000021834)	tnfaip8l1 (ENSOMYG00000021831)	ENSOMYG00000021822 #21	ENSOMYG00000021791 #22	ncln (ENSOMYG00000021732)	ENSOMYG00000002767	ENSOMYG00000021688	s1pr4 (ENSOMYG00000077370)	ENSOMYG00000053658	ENSOMYG00000021538	ENSOMYG00000051809	CTH (ENSOMYG00000020786)	ENSOMYG00000077661	ENSOMYG00000020472	SRSF11 (ENSOMYG00000020427)	XXYLT1 (ENSOMYG00000020416)	ENSOMYG00000073191	fam43a (ENSOMYG00000020410)	lsg1 (ENSOMYG00000020215)
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00940000157924.h	ENSGT00940000164495.c.b.d	ENSGT00940000155438.b.v	ENSGT00390000012078.a.a.d	ENSGT00950000182915.b.b.a.b.c.a.b	ENSGT00390000002505	ENSGT00730000111147.l	ENSGT00940000163917.a.a.b	ENSGT00940000160775.h	ENSGT00940000162148.s.b	ENSGT00940000158364.b.d	ENSGT00940000154779.a.a.d	ENSGT00390000000777.e.b	ENSGT00390000003488.a.b.a.e	ENSGT00390000003478.k #21	ENSGT01030000234515.b.k #22	ENSGT00500000044945.a.c	ENSGT01050000244887.B.f	ENSGT00940000156845.oc.a.a	ENSGT00940000164178.g	ENSGT00390000000312.m.a	ENSGT00950000182928.B.d.b.r	ENSGT00730000110872.b.cb.c	ENSGT00940000158154.c	ENSGT00940000161593.c	ENSGT00940000156442.f	ENSGT00940000155941.A.m.b	ENSGT00950000182904.a.b.b.b.b	ENSGT00390000012482.h	ENSGT00940000159489	ENSGT00940000166579
Coho salmon	MODERN SPECIES	24	klf2a (ENSOKIG00005001067)	EPS15L1 (ENSOKIG00005001028)	rad23ab (ENSOKIG00005000990)	ENSOKIG00005000977	C19orf44 (ENSOKIG00005000965)	cherp (ENSOKIG00005000941)	rx1 (ENSOKIG00005000923)	ENSOKIG00005000918	MATK (ENSOKIG00005000905)	ZFR2 (ENSOKIG00005000869)	ATCAY (ENSOKIG00005000849)	loxl5a (ENSOKIG00005000843)	mydgf (ENSOKIG00005000839)	tnfaip8l1 (ENSOKIG00005000829)	COPE (ENSOKIG00005000814) #21	CERS1 (ENSOKIG00005000792) #22	ncln (ENSOKIG00005000759)	s1pr4 (ENSOKIG00005000734)	MYO9B (ENSOKIG00005000692)	ENSOKIG00005000649	CTH (ENSOKIG00005000561)	ankrd13c (ENSOKIG00005000464)	srsf11 (ENSOKIG00005000426)	XXYLT1 (ENSOKIG00005000419)	fam43a (ENSOKIG00005000413)	ENSOKIG00005000407	ATP13A3 (ENSOKIG00005000275)	KCNN1 (ENSOKIG00005000127)	ccdc124 (ENSOKIG00005038681)	slc5a5 (ENSOKIG00005038490)	ENSOKIG00005038250
Chinook salmon	MODERN SPECIES	30	mrpl54 (ENSOTSG00005031900)	ap1m1 (ENSOTSG00005031837)	klf2a (ENSOTSG00005031833)	EPS15L1 (ENSOTSG00005031777)	rad23ab (ENSOTSG00005031774)	ENSOTSG00005031769	C19orf44 (ENSOTSG00005031768)	cherp (ENSOTSG00005031377)	rx1 (ENSOTSG00005031371)	MATK (ENSOTSG00005030480)	ATCAY (ENSOTSG00005030286)	loxl5a (ENSOTSG00005030284)	mydgf (ENSOTSG00005030279)	tnfaip8l1 (ENSOTSG00005030278)	cope (ENSOTSG00005030277) #21	CERS1 (ENSOTSG00005030275) #22	ncln (ENSOTSG00005030272)	s1pr4 (ENSOTSG00005030267)	MYO9B (ENSOTSG00005029917)	CTH (ENSOTSG00005027613)	ankrd13c (ENSOTSG00005027558)	srsf11 (ENSOTSG00005027541)	XXYLT1 (ENSOTSG00005027539)	zbtb33 (ENSOTSG00005027537)	fam43a (ENSOTSG00005027535)	ATP13A3 (ENSOTSG00005036782)	ENSOTSG00005036777	ENSOTSG00005036775	KCNN1 (ENSOTSG00005036774)	ccdc124 (ENSOTSG00005036773)	slc5a5 (ENSOTSG00005036771)
Salmoninae	ANCESTRAL SPECIES	318	ENSGT00390000013811.sb	ENSGT00940000157924.g	ENSGT00940000164495.c.b.c	ENSGT00940000155438.b.u	ENSGT00390000012078.a.a.c	ENSGT00950000182915.b.b.a.b.c.a.a	ENSGT00730000111147.k	ENSGT00940000163917.a.a.a	ENSGT00940000160775.g	ENSGT00940000162148.s.a	ENSGT00940000158364.b.c	ENSGT00940000165007.b.c	ENSGT00390000000777.e.a	ENSGT00390000003488.a.b.a.f	ENSGT00390000003478.l #21	ENSGT01030000234515.b.l #22	ENSGT00500000044945.a.d	ENSGT01050000244887.B.e	ENSGT00940000156845.oc.a.b	ENSGT00390000000312.m.b	ENSGT00950000182928.B.d.b.q	ENSGT00730000110872.b.cb.d	ENSGT00940000158154.d	ENSGT00940000161593.d	ENSGT00940000156442.e	ENSGT00390000018718	ENSGT00940000155941.A.m.a	ENSGT00950000182904.a.b.b.b.a	ENSGT00390000012482.g	ENSGT00940000159134.n	ENSGT00940000165170.c.a
Huchen	MODERN SPECIES	58	klf2a (ENSHHUG00000027390)	EPS15L1 (ENSHHUG00000027399)	rad23ab (ENSHHUG00000027407)	ENSHHUG00000027410	cherp (ENSHHUG00000027529)	rx1 (ENSHHUG00000027680)	MATK (ENSHHUG00000027684)	ENSHHUG00000027690	ENSHHUG00000027695	ENSHHUG00000027701	ATCAY (ENSHHUG00000027707)	mibp (ENSHHUG00000027720)	mydgf (ENSHHUG00000027729)	tnfaip8l1 (ENSHHUG00000027734)	cope (ENSHHUG00000027738) #21	CERS1 (ENSHHUG00000027948) #22	ncln (ENSHHUG00000027952)	s1pr4 (ENSHHUG00000028058)	MYO9B (ENSHHUG00000028061)	ENSHHUG00000028108	CTH (ENSHHUG00000028121)	ankrd13c (ENSHHUG00000028190)	srsf11 (ENSHHUG00000028249)	XXYLT1 (ENSHHUG00000028272)	fam43a (ENSHHUG00000028276)	lsg1 (ENSHHUG00000028281)	ENSHHUG00000028294	ENSHHUG00000028297	ENSHHUG00000028305	ENSHHUG00000028309	ENSHHUG00000028312
Salmoninae_a	ANCESTRAL SPECIES	22	ENSGT00390000013811.sb	ENSGT00940000157924.g	ENSGT00940000164495.c.b.c	ENSGT00940000155438.b.u	ENSGT00390000012078.a.a.c	ENSGT00950000182915.b.b.a.b.c.a.a	ENSGT00730000111147.k	ENSGT00940000163917.a.a.a	ENSGT00940000160775.g	ENSGT00940000162148.s.a	ENSGT00940000158364.b.c	ENSGT00940000165007.b.c	ENSGT00390000000777.e.a	ENSGT00390000003488.a.b.a.f	ENSGT00390000003478.l #21	ENSGT01030000234515.b.l #22	ENSGT00500000044945.a.d	ENSGT01050000244887.B.e	ENSGT00940000156845.oc.a.b	ENSGT00390000000312.m.b	ENSGT00950000182928.B.d.b.q	ENSGT00730000110872.b.cb.d	ENSGT00940000158154.d	ENSGT00940000161593.d	ENSGT00940000156442.e	ENSGT00390000018718	ENSGT00940000155941.A.m.a	ENSGT00950000182904.a.b.b.b.a	ENSGT00390000012482.g	ENSGT00940000159134.n	ENSGT00940000165170.c.a
Oncorhynchus	ANCESTRAL SPECIES	8	ENSGT00390000013811.sb	ENSGT00940000157924.g	ENSGT00940000164495.c.b.c	ENSGT00940000155438.b.u	ENSGT00390000012078.a.a.c	ENSGT00950000182915.b.b.a.b.c.a.a	ENSGT00730000111147.k	ENSGT00940000163917.a.a.a	ENSGT00940000160775.g	ENSGT00940000162148.s.a	ENSGT00940000158364.b.c	ENSGT00940000165007.b.c	ENSGT00390000000777.e.a	ENSGT00390000003488.a.b.a.f	ENSGT00390000003478.l #21	ENSGT01030000234515.b.l #22	ENSGT00500000044945.a.d	ENSGT01050000244887.B.e	ENSGT00940000156845.oc.a.b	ENSGT00390000000312.m.b	ENSGT00950000182928.B.d.b.q	ENSGT00730000110872.b.cb.d	ENSGT00940000158154.d	ENSGT00940000161593.d	ENSGT00940000156442.e	ENSGT00390000018718	ENSGT00940000155941.A.m.a	ENSGT00950000182904.a.b.b.b.a	ENSGT00390000012482.g	ENSGT00940000159134.n	ENSGT00940000165170.c.a
Rainbow trout	MODERN SPECIES	26	ENSOMYG00000064824	AP1M1 (ENSOMYG00000007657)	ENSOMYG00000074095	ENSOMYG00000007454	EPS15L1 (ENSOMYG00000007267)	ENSOMYG00000006796	cherp (ENSOMYG00000006525)	rx1 (ENSOMYG00000006180)	ENSOMYG00000006129	ATCAY (ENSOMYG00000006031)	ENSOMYG00000006106	mibp (ENSOMYG00000005995)	mydgf (ENSOMYG00000005949)	tnfaip8l1 (ENSOMYG00000070060)	ENSOMYG00000005786 #21	ENSOMYG00000005601 #22	ncln (ENSOMYG00000005499)	ENSOMYG00000056235	s1pr4 (ENSOMYG00000005238)	ENSOMYG00000005007	CTH (ENSOMYG00000004655)	ENSOMYG00000072786	ENSOMYG00000029532	ENSOMYG00000004252	SRSF11 (ENSOMYG00000004172)	ENSOMYG00000049370	fam43a (ENSOMYG00000004071)	lsg1 (ENSOMYG00000003418)	tmem44 (ENSOMYG00000003042)	ATP13A3 (ENSOMYG00000002940)	ENSOMYG00000002665
Oncorhynchus_a	ANCESTRAL SPECIES	14	ENSGT00390000013811.sb	ENSGT00940000157924.g	ENSGT00940000164495.c.b.c	ENSGT00940000155438.b.u	ENSGT00390000012078.a.a.c	ENSGT00950000182915.b.b.a.b.c.a.a	ENSGT00730000111147.k	ENSGT00940000163917.a.a.a	ENSGT00940000160775.g	ENSGT00940000162148.s.a	ENSGT00940000158364.b.c	ENSGT00940000165007.b.c	ENSGT00390000000777.e.a	ENSGT00390000003488.a.b.a.f	ENSGT00390000003478.l #21	ENSGT01030000234515.b.l #22	ENSGT00500000044945.a.d	ENSGT01050000244887.B.e	ENSGT00940000156845.oc.a.b	ENSGT00390000000312.m.b	ENSGT00950000182928.B.d.b.q	ENSGT00730000110872.b.cb.d	ENSGT00940000158154.d	ENSGT00940000161593.d	ENSGT00940000156442.e	ENSGT00390000018718	ENSGT00940000155941.A.m.a	ENSGT00950000182904.a.b.b.b.a	ENSGT00390000012482.g	ENSGT00940000159134.n	ENSGT00940000165170.c.a
Chinook salmon	MODERN SPECIES	29	fam32a (ENSOTSG00005030904)	ap1m1 (ENSOTSG00005030882)	ENSOTSG00005030878	klf2a (ENSOTSG00005030877)	EPS15L1 (ENSOTSG00005030850)	ENSOTSG00005030838	cherp (ENSOTSG00005030809)	rx1 (ENSOTSG00005030808)	MATK (ENSOTSG00005030807)	ATCAY (ENSOTSG00005030806)	ZFR2 (ENSOTSG00005030781)	mibp (ENSOTSG00005030772)	mydgf (ENSOTSG00005030769)	tnfaip8l1 (ENSOTSG00005030766)	cope (ENSOTSG00005030760) #21	CERS1 (ENSOTSG00005030759) #22	ncln (ENSOTSG00005030758)	s1pr4 (ENSOTSG00005030752)	MYO9B (ENSOTSG00005030748)	CTH (ENSOTSG00005030711)	ENSOTSG00005030709	ankrd13c (ENSOTSG00005030698)	srsf11 (ENSOTSG00005030690)	ENSOTSG00005030687	XXYLT1 (ENSOTSG00005030686)	ENSOTSG00005030684	fam43a (ENSOTSG00005030683)	lsg1 (ENSOTSG00005029703)	tmem44 (ENSOTSG00005029702)	ATP13A3 (ENSOTSG00005027247)	KCNN1 (ENSOTSG00005027200)
Coho salmon	MODERN SPECIES	4	fam32a (ENSOKIG00005016293)	ap1m1 (ENSOKIG00005016315)	klf2a (ENSOKIG00005016373)	EPS15L1 (ENSOKIG00005016409)	ENSOKIG00005016559	ENSOKIG00005016573	cherp (ENSOKIG00005016642)	rx1 (ENSOKIG00005016935)	MATK (ENSOKIG00005016967)	ZFR2 (ENSOKIG00005017037)	ATCAY (ENSOKIG00005017087)	mibp (ENSOKIG00005017108)	mydgf (ENSOKIG00005017120)	tnfaip8l1 (ENSOKIG00005017129)	cope (ENSOKIG00005017138) #21	CERS1 (ENSOKIG00005017191) #22	ncln (ENSOKIG00005017207)	s1pr4 (ENSOKIG00005017254)	MYO9B (ENSOKIG00005003855)	CTH (ENSOKIG00005004013)	ANKRD13C (ENSOKIG00005004197)	SRSF11 (ENSOKIG00005004377)	XXYLT1 (ENSOKIG00005004426)	fam43a (ENSOKIG00005004447)	lsg1 (ENSOKIG00005004557)	tmem44 (ENSOKIG00005005329)	ATP13A3 (ENSOKIG00005005603)	KCNN1 (ENSOKIG00005011142)	CCDC124 (ENSOKIG00005011427)	ENSOKIG00005011435	B3GNT3 (ENSOKIG00005011441)
Salmo	ANCESTRAL SPECIES	14	ENSGT00390000013811.sb	ENSGT00940000157924.g	ENSGT00940000164495.c.b.c	ENSGT00940000155438.b.u	ENSGT00390000012078.a.a.c	ENSGT00950000182915.b.b.a.b.c.a.a	ENSGT00730000111147.k	ENSGT00940000163917.a.a.a	ENSGT00940000160775.g	ENSGT00940000162148.s.a	ENSGT00940000158364.b.c	ENSGT00940000165007.b.c	ENSGT00390000000777.e.a	ENSGT00390000003488.a.b.a.f	ENSGT00390000003478.l #21	ENSGT01030000234515.b.l #22	ENSGT00500000044945.a.d	ENSGT01050000244887.B.e	ENSGT00940000156845.oc.a.b	ENSGT00390000000312.m.b	ENSGT00950000182928.B.d.b.q	ENSGT00730000110872.b.cb.d	ENSGT00940000179649	ENSGT00940000161593.d	ENSGT00940000156442.e	ENSGT00390000018718	ENSGT00940000155941.A.m.a	ENSGT00950000182904.a.b.b.b.a	ENSGT00390000012482.g	ENSGT00940000159134.n	ENSGT01010000228826
River trout	MODERN SPECIES	14	fam32a (ENSSTUG00000030806)	ap1m1 (ENSSTUG00000030757)	klf2a (ENSSTUG00000030747)	EPS15L1 (ENSSTUG00000030596)	ENSSTUG00000030502	ENSSTUG00000015879	cherp (ENSSTUG00000015809)	rx1 (ENSSTUG00000015791)	MATK (ENSSTUG00000015672)	ZFR2 (ENSSTUG00000015626)	ATCAY (ENSSTUG00000015604)	mibp (ENSSTUG00000015587)	mydgf (ENSSTUG00000015579)	tnfaip8l1 (ENSSTUG00000015562)	cope (ENSSTUG00000015437) #21	CERS1 (ENSSTUG00000015400) #22	ncln (ENSSTUG00000015344)	s1pr4 (ENSSTUG00000015329)	MYO9B (ENSSTUG00000015257)	CTH (ENSSTUG00000015078)	ankrd13c (ENSSTUG00000014913)	srsf11 (ENSSTUG00000014868)	ENSSTUG00000014843	ENSSTUG00000014835	fam43a (ENSSTUG00000014809)	lsg1 (ENSSTUG00000014124)	tmem44 (ENSSTUG00000014105)	ATP13A3 (ENSSTUG00000011598)	KCNN1 (ENSSTUG00000011398)	ccdc124 (ENSSTUG00000011372)	B3GNT3 (ENSSTUG00000011362)
Atlantic salmon	MODERN SPECIES	1	ENSSSAG00000006501	EPS15L1 (ENSSSAG00000003523)	ENSSSAG00000003307	ENSSSAG00000003242	cherp (ENSSSAG00000002956)	rx1 (ENSSSAG00000002891)	MATK (ENSSSAG00000073285)	ENSSSAG00000002710	ATCAY (ENSSSAG00000119880)	mibp (ENSSSAG00000095960)	mydgf (ENSSSAG00000002463)	tnfaip8l1 (ENSSSAG00000099868)	ENSSSAG00000002430 #21	ncln (ENSSSAG00000002362)	s1pr4 (ENSSSAG00000069985)	ENSSSAG00000002400 #22	ENSSSAG00000069274	cgl (ENSSSAG00000068808)	ENSSSAG00000068750	ENSSSAG00000098287	SFR11 (ENSSSAG00000068733)	ENSSSAG00000068730	ENSSSAG00000082130	fam43a (ENSSSAG00000068727)	ENSSSAG00000068692	ATP13A3 (ENSSSAG00000066487)	ENSSSAG00000065243	ENSSSAG00000089621	ENSSSAG00000065183	ENSSSAG00000103468	ENSSSAG00000089451
Northern pike	MODERN SPECIES	7	ap1m1 (ENSELUG00000022484)	klf2a (ENSELUG00000022520)	EPS15L1 (ENSELUG00000022752)	rad23ab (ENSELUG00000022805)	ENSELUG00000022861	ENSELUG00000000980	cherp (ENSELUG00000023026)	rx1 (ENSELUG00000034019)	MATK (ENSELUG00000023140)	ZFR2 (ENSELUG00000023320)	ATCAY (ENSELUG00000023385)	mibp (ENSELUG00000029203)	loxl5a (ENSELUG00000023470)	tnfaip8l1 (ENSELUG00000023491)	cope (ENSELUG00000023604) #21	CERS1 (ENSELUG00000023619) #22	ncln (ENSELUG00000023662)	s1pr4 (ENSELUG00000023671)	MYO9B (ENSELUG00000023777)	cthl (ENSELUG00000023794)	ankrd13c (ENSELUG00000023870)	srsf11 (ENSELUG00000023887)	XXYLT1 (ENSELUG00000023918)	fam43a (ENSELUG00000023932)	lsg1 (ENSELUG00000023973)	tmem44 (ENSELUG00000024003)	ATP13A3 (ENSELUG00000024346)	ENSELUG00000025960	KCNN1 (ENSELUG00000024421)	ccdc124 (ENSELUG00000024433)	slc5a5 (ENSELUG00000024482)
Otomorpha	ANCESTRAL SPECIES	31	ENSGT00940000164495.c.b	ENSGT00940000155438.b	ENSGT00390000012078.a.a	ENSGT00950000182915.b.b.a.b.d	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.d	ENSGT00390000000051.a
Clupeiformes	ANCESTRAL SPECIES	9	ENSGT00390000013811	ENSGT00940000164495.c.b	ENSGT00940000155438.b	ENSGT00390000012078.a.a	ENSGT00950000182915.b.b.a.b.d	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a ##22	ENSGT00950000183158.A	ENSGT00940000154412.C.d	ENSGT00390000000051.a
Denticle herring	MODERN SPECIES	4	malt2 (ENSDCDG00000026429)	mrpl54 (ENSDCDG00000026434)	fam32a (ENSDCDG00000026435)	klf2a (ENSDCDG00000026436)	EPS15L1 (ENSDCDG00000026449)	rad23ab (ENSDCDG00000026602)	ENSDCDG00000026607	cherp (ENSDCDG00000026616)	rx1 (ENSDCDG00000026630)	ENSDCDG00000026637	ATCAY (ENSDCDG00000026997)	mibp (ENSDCDG00000027000)	loxl5a (ENSDCDG00000027005)	mydgf (ENSDCDG00000027013)	tnfaip8l1 (ENSDCDG00000027016)	CERS1 (ENSDCDG00000027018) #22	ncln (ENSDCDG00000027020)	s1pr4 (ENSDCDG00000027040)	MYO9B (ENSDCDG00000027057)	use1 (ENSDCDG00000027172)	insrb (ENSDCDG00000027198)	ARHGEF18 (ENSDCDG00000028647)	enc3 (ENSDCDG00000028653)	timm13 (ENSDCDG00000028654)	ENSDCDG00000028657	lsm7 (ENSDCDG00000028667)	ENSDCDG00000028670	cers4a (ENSDCDG00000028672) ##22	fbn2b (ENSDCDG00000028772)	CTXN1 (ENSDCDG00000031272)	timm44 (ENSDCDG00000031285)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	1	klf2a (ENSCHAG00000001744)	EPS15L1 (ENSCHAG00000001791)	rad23ab (ENSCHAG00000002941)	ENSCHAG00000003029	ENSCHAG00000003100	cherp (ENSCHAG00000003141)	rx1 (ENSCHAG00000003424)	ENSCHAG00000003435	MATK (ENSCHAG00000003464)	ZFR2 (ENSCHAG00000003982)	ATCAY (ENSCHAG00000004318)	mibp (ENSCHAG00000004457)	loxl5a (ENSCHAG00000004515)	mydgf (ENSCHAG00000004580)	tnfaip8l1 (ENSCHAG00000004596)	CERS1 (ENSCHAG00000004630) #22	ncln (ENSCHAG00000004644)	s1pr4 (ENSCHAG00000004854)	MYO9B (ENSCHAG00000004904)	use1 (ENSCHAG00000005482)	insrb (ENSCHAG00000005950)	ARHGEF18 (ENSCHAG00000016034)	enc3 (ENSCHAG00000016176)	timm13 (ENSCHAG00000016192)	ENSCHAG00000016219	lsm7 (ENSCHAG00000016232)	ENSCHAG00000016253	cers4a (ENSCHAG00000016263) ##22	fbn2b (ENSCHAG00000016353)	CTXN1 (ENSCHAG00000019520)	timm44 (ENSCHAG00000020190)
Atlantic herring	MODERN SPECIES	14	ENSCHAG00000016829	zgc:153115 (ENSCHAG00000016814)	tbl1xr1b (ENSCHAG00000016664)	kcnmb2 (ENSCHAG00000016553)	ENSCHAG00000016459	ENSCHAG00000016332	ephb3a (ENSCHAG00000015493)	PCOLCE2 (ENSCHAG00000015418)	pls1 (ENSCHAG00000014673)	chst2a (ENSCHAG00000014628)	dipk2aa (ENSCHAG00000014605)	ENSCHAG00000014420	ENSCHAG00000014379	ENSCHAG00000014349	cope (ENSCHAG00000014158) #21	CERS1 (ENSCHAG00000014120) #22	st6galnac3 (ENSCHAG00000014108)	ST6GALNAC5 (ENSCHAG00000014093)	pigk (ENSCHAG00000013796)	ak5 (ENSCHAG00000013698)	zzz3 (ENSCHAG00000013570)	usp33 (ENSCHAG00000012239)	miga1 (ENSCHAG00000010992)	fubp1 (ENSCHAG00000010859)	slc25a24l (ENSCHAG00000010845)	dnajb4 (ENSCHAG00000010821)	gipc2 (ENSCHAG00000010797)	txndc12 (ENSCHAG00000010714)	abcb8 (ENSCHAG00000010415)	cdk5 (ENSCHAG00000010193)	ENSCHAG00000010164
Otophysi	ANCESTRAL SPECIES	3	ENSGT01030000234515.a.b.b.a ##22	ENSGT00940000163715.b	ENSGT00390000012078.a.a	ENSGT00950000182915.b.b.a.b.d	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00390000006932	ENSGT00940000157395
Cyprinoidei	ANCESTRAL SPECIES	96	ENSGT00390000000051.a	ENSGT00940000154412.C.d	ENSGT00950000183158.A.a	ENSGT01030000234515.a.b.b.a ##22	ENSGT00940000155273	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.b.a.a	ENSGT01050000244806.b.a.b.c.a.a.b.b	ENSGT00490000043388.b.a	ENSGT00730000111323	ENSGT01050000244824.F	ENSGT00940000164287	ENSGT00940000166028	ENSGT00950000182846.a.a.b.b	ENSGT00950000182846.a.a.b.a.d	ENSGT00940000163467.a.b.b.b.a.a	ENSGT00940000161090.B.c.b.b.a	ENSGT00940000153993.B	ENSGT01090000260194
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	358	ENSGT00390000002505	ENSGT00730000111147.b	ENSGT00940000163917.a.a.c	ENSGT00730000111147.a	ENSGT00940000163917.a.a.d	ENSGT00940000160775	ENSGT00940000162148.a.a	ENSGT00940000158364.b.e	ENSGT00940000165007.b.b	ENSGT00940000162148.b	ENSGT00940000158364.b.f	ENSGT00940000165007.b.a	ENSGT00940000154779.a.a.d	ENSGT00390000000777.d	ENSGT00390000003488.a.b.a.j	ENSGT01030000234515.b.o #22	ENSGT00500000044945.a.a	ENSGT01050000244887.B.c	ENSGT00940000156845.yc.a	ENSGT00990000209519.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	1226																CERS1 (ENSCARG00000039420) #22	ncln (ENSCARG00000039435)	s1pr4 (ENSCARG00000039705)	MYO9B (ENSCARG00000039757)	ENSCARG00000039929	ENSCARG00000039942	ENSCARG00000039963	ENSCARG00000039973	zgc:171566 (ENSCARG00000039988)	ENSCARG00000040096	mcm2 (ENSCARG00000040158)	ccdc51 (ENSCARG00000041125)	tma7 (ENSCARG00000041148)	dnase1l4.1 (ENSCARG00000041168)	dnase1l4.2 (ENSCARG00000041304)	ENSCARG00000041396
Goldfish	MODERN SPECIES	2514									rx1 (ENSCARG00000050889)	ZFR2 (ENSCARG00000050895)	ATCAY (ENSCARG00000050915)	mibp (ENSCARG00000050944)	loxl5a (ENSCARG00000050964)	mydgf (ENSCARG00000051010)	tnfaip8l1 (ENSCARG00000051069)	CERS1 (ENSCARG00000051087) #22
Cyprininae_a	ANCESTRAL SPECIES	397							ENSGT00390000002505	ENSGT00730000111147.b	ENSGT00940000163917.a.a.c	ENSGT00940000162148.b	ENSGT00940000158364.b.f	ENSGT00940000165007.b.a	ENSGT00940000154779.a.a.d	ENSGT00390000000777.d	ENSGT00390000003488.a.b.a.j	ENSGT01030000234515.b.o #22	ENSGT00500000044945.a.a	ENSGT01050000244887.B.c	ENSGT00940000156845.yc.a	ENSGT00990000209519.b	ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.b.b.a.b	ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.b.a.a.b	ENSGT01050000244806.b.a.b.c.a.a.b.b.a	ENSGT00490000043388.b.a.r	ENSGT00940000164935.b.l	ENSGT00940000166028	ENSGT00950000182846.a.a.b.a.d.a	ENSGT00940000163467.a.b.b.b.a.a.b	ENSGT01090000260194.a	ENSGT01030000234515.a.a.a.m.a ##22
Common carp reference	MODERN SPECIES	43	ENSCCRG00000036744	ENSCCRG00000029714	ENSCCRG00000000659	ENSCCRG00000081960	ENSCCRG00000071901	ENSCCRG00000039920	cherp (ENSCCRG00000039932)	ENSCCRG00000032149	rx1 (ENSCCRG00000074717)	ENSCCRG00000032140	ENSCCRG00000032130	mibp (ENSCCRG00000032098)	loxl5a (ENSCCRG00000032114)	mydgf (ENSCCRG00000031450)	tnfaip8l1 (ENSCCRG00000057448)	ENSCCRG00000008459 #22	ncln (ENSCCRG00000030135)	s1pr4 (ENSCCRG00000057515)	ENSCCRG00000043639	zgc:194627 (ENSCCRG00000049894)	ENSCCRG00000057239	ENSCCRG00000021582	ENSCCRG00000071276	ENSCCRG00000024338	mcm2 (ENSCCRG00000054626)	tma7 (ENSCCRG00000077514)	dnase1l4.2 (ENSCCRG00000039317)	ENSCCRG00000036806	ENSCCRG00000073556	ENSCCRG00000012643	ENSCCRG00000036305
Golden-line barbel	MODERN SPECIES	369	calr3a (ENSSGRG00000046259)	ENSSGRG00000046258	ENSSGRG00000046257	ENSSGRG00000046256	ENSSGRG00000046255	ENSSGRG00000046254	cherp (ENSSGRG00000046248)	rx1 (ENSSGRG00000046238)	ENSSGRG00000046236	ENSSGRG00000046235	ENSSGRG00000046234	mibp (ENSSGRG00000046203)	loxl5a (ENSSGRG00000046202)	mydgf (ENSSGRG00000046200)	tnfaip8l1 (ENSSGRG00000046195)	CERS1 (ENSSGRG00000046194) #22	ncln (ENSSGRG00000046162)	s1pr4 (ENSSGRG00000046161)	MYO9B (ENSSGRG00000046133)	zgc:194627 (ENSSGRG00000046129)	ENSSGRG00000046128	ENSSGRG00000046126	zgc:171566 (ENSSGRG00000046124)	ENSSGRG00000046122	mcm2 (ENSSGRG00000045827)	dnase1l4.1 (ENSSGRG00000045806)	dnase1l4.2 (ENSSGRG00000045800)
Cyprininae	ANCESTRAL SPECIES	806														ENSGT00390000000777.c	ENSGT00390000003488.a.b.a.i	ENSGT01030000234515.b.p #22	ENSGT00500000044945.a.b	ENSGT01050000244887.B.d	ENSGT00940000156845.yc.b	ENSGT00990000209519.a.a	ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.b.b	ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.a.b.a.b.a.a.b.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	14	ENSCARG00000059403	ENSCARG00000059413	ENSCARG00000059452	ENSCARG00000059471	ENSCARG00000059497	ENSCARG00000059516	ENSCARG00000059533	ENSCARG00000059567	ENSCARG00000059602	ENSCARG00000059624	ENSCARG00000059671	ENSCARG00000059686	ENSCARG00000059716	ENSCARG00000059733	ENSCARG00000059812	CERS1 (ENSCARG00000060032) #22	ncln (ENSCARG00000060185)	s1pr4 (ENSCARG00000061779)	ENSCARG00000061788	ENSCARG00000061799	ENSCARG00000061807	ENSCARG00000061813	ENSCARG00000061821	ENSCARG00000061837	ENSCARG00000061846	ENSCARG00000061855	ENSCARG00000061879	ENSCARG00000061915	ENSCARG00000061926	ENSCARG00000061937	ENSCARG00000061948
Goldfish	MODERN SPECIES	14	CTXN1 (ENSCARG00000008131)	timm44 (ENSCARG00000007422)	uhrf1 (ENSCARG00000007142)	kdm4b (ENSCARG00000007096)	ENSCARG00000007087	ENSCARG00000007082	ENSCARG00000007071	ENSCARG00000007066	cherp (ENSCARG00000005550)	rx1 (ENSCARG00000005483)	MATK (ENSCARG00000005161)	ZFR2 (ENSCARG00000005114)	ATCAY (ENSCARG00000005106)	mibp (ENSCARG00000005096)	mydgf (ENSCARG00000005087)	CERS1 (ENSCARG00000005080) #22	ncln (ENSCARG00000005010)	s1pr4 (ENSCARG00000004985)	MYO9B (ENSCARG00000004764)	zgc:194627 (ENSCARG00000004732)	zgc:194627 (ENSCARG00000004720)	zgc:194627 (ENSCARG00000004714)	zgc:194627 (ENSCARG00000004706)	ENSCARG00000004698	ENSCARG00000004694	ENSCARG00000004686	zgc:171566 (ENSCARG00000004671)	ENSCARG00000004665	mcm2 (ENSCARG00000004622)	ccdc51 (ENSCARG00000004608)	ENSCARG00000004602
Cyprininae_a	ANCESTRAL SPECIES	320								ENSGT00730000111147.a.a	ENSGT00940000163917.a.a.d	ENSGT00940000160775	ENSGT00940000162148.a.a	ENSGT00940000158364.b.e	ENSGT00940000165007.b.b	ENSGT00390000000777.c	ENSGT00390000003488.a.b.a.i	ENSGT01030000234515.b.p #22	ENSGT00500000044945.a.b	ENSGT01050000244887.B.d	ENSGT00940000156845.yc.b	ENSGT00990000209519.a.a	ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.b.b.a.a	ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.a.b.a.b.a.a.b.a	ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.a.b.a.b.a.a.b.b	ENSGT01050000244806.b.a.b.c.a.a.a.a.a.b.b.a.a.a	ENSGT01050000244806.b.a.b.c.a.a.b.b.b	ENSGT00490000043388.b.a.q	ENSGT00730000111323.h	ENSGT00730000111323.g.a	ENSGT01050000244824.F.h	ENSGT00940000164287.a.a	ENSGT00950000182846.a.a.b.b.l
Common carp reference	MODERN SPECIES	5	ENSCCRG00000044505	ENSCCRG00000074003	ENSCCRG00000015007	ENSCCRG00000078449	ENSCCRG00000071319	ENSCCRG00000080806	ENSCCRG00000048629	cherp (ENSCCRG00000048152)	rx1 (ENSCCRG00000054868)	ENSCCRG00000069601	ATCAY (ENSCCRG00000065036)	ENSCCRG00000076531	mibp (ENSCCRG00000057629)	mydgf (ENSCCRG00000074169)	tnfaip8l1 (ENSCCRG00000072675)	ENSCCRG00000031439 #22	ncln (ENSCCRG00000008466)	s1pr4 (ENSCCRG00000054871)	zgc:194627 (ENSCCRG00000072947)	ENSCCRG00000043399	ENSCCRG00000043421	zgc:194627 (ENSCCRG00000066387)	zgc:194627 (ENSCCRG00000011235)	ENSCCRG00000047847	ENSCCRG00000059895	ENSCCRG00000072831	ENSCCRG00000073014	ENSCCRG00000058856	ENSCCRG00000064369	ENSCCRG00000081711	ENSCCRG00000054931
Golden-line barbel	MODERN SPECIES	1067	ENSSGRG00000019329	ENSSGRG00000019328	ENSSGRG00000019327	ENSSGRG00000019326	cherp (ENSSGRG00000019013)	cherp (ENSSGRG00000019007)	rx1 (ENSSGRG00000019006)	MATK (ENSSGRG00000018999)	ZFR2 (ENSSGRG00000018996)	mibp (ENSSGRG00000018987)	ENSSGRG00000018985	loxl5a (ENSSGRG00000018984)	mydgf (ENSSGRG00000018983)	tnfaip8l1 (ENSSGRG00000018982)	ENSSGRG00000018981	CERS1 (ENSSGRG00000018979) #22	ncln (ENSSGRG00000018474)	s1pr4 (ENSSGRG00000018462)	MYO9B (ENSSGRG00000018018)	zgc:194627 (ENSSGRG00000018014)	ENSSGRG00000018013	ENSSGRG00000018011	zgc:194627 (ENSSGRG00000018010)	ENSSGRG00000018008	ENSSGRG00000018007	zgc:171566 (ENSSGRG00000018006)	ENSSGRG00000018005	mcm2 (ENSSGRG00000017947)	ENSSGRG00000017946	dnase1l4.1 (ENSSGRG00000017937)	dnase1l4.1 (ENSSGRG00000017936)
Zebrafish	MODERN SPECIES	14	ENSDARG00000078519	ENSDARG00000094604	ENSDARG00000071653	ENSDARG00000092513	ENSDARG00000090673	cherp (ENSDARG00000021812)	rx1 (ENSDARG00000071684)	MATK (ENSDARG00000074670)	ZFR2 (ENSDARG00000071683)	ATCAY (ENSDARG00000071678)	mibp (ENSDARG00000101362)	loxl5a (ENSDARG00000071680)	ENSDARG00000116752	mydgf (ENSDARG00000071679)	tnfaip8l1 (ENSDARG00000086457)	CERS1 (ENSDARG00000063412) #22	ncln (ENSDARG00000058861)	s1pr4 (ENSDARG00000074851)	MYO9B (ENSDARG00000078313)	zgc:194627 (ENSDARG00000102594)	ENSDARG00000104399	ENSDARG00000098966	ENSDARG00000103696	ENSDARG00000094155	ENSDARG00000104592	GGH (ENSDARG00000105118)	mcm2 (ENSDARG00000102798)	ccdc51 (ENSDARG00000058828)	tma7 (ENSDARG00000071670)	dnase1l4.1 (ENSDARG00000015123)	dnase1l4.2 (ENSDARG00000011376)
Characiphysae	ANCESTRAL SPECIES	28	ENSGT01030000234515.a.b.b.a ##22	ENSGT00940000163715.b	ENSGT00390000012078.a.a	ENSGT00950000182915.b.b.a.b.d	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00390000006932	ENSGT00940000157395	ENSGT00940000165866	ENSGT00940000160221.c	ENSGT00390000018319.a.b.b.b.b
Channel catfish	MODERN SPECIES	1	ENSIPUG00000024461	alpi.1 (ENSIPUG00000024463)	alpi.2 (ENSIPUG00000024465)	ppp1r2 (ENSIPUG00000024467)	ncl (ENSIPUG00000024556)	psmd1 (ENSIPUG00000024562)	htr2b (ENSIPUG00000024583)	ttc14 (ENSIPUG00000024586)	sox2 (ENSIPUG00000024592)	dnajc19 (ENSIPUG00000024593)	fxr1 (ENSIPUG00000024597)	ATP11B (ENSIPUG00000024606)	mccc1 (ENSIPUG00000024615)	lamp3 (ENSIPUG00000024619)	ENSIPUG00000024621	cers1 (ENSIPUG00000024624) #22	ncln (ENSIPUG00000024632)	s1pr4 (ENSIPUG00000024637)	myo9b (ENSIPUG00000024658)	use1 (ENSIPUG00000024672)	insrb (ENSIPUG00000024674)	arhgef18 (ENSIPUG00000024688)	enc3 (ENSIPUG00000024711)	timm13 (ENSIPUG00000024713)	ENSIPUG00000024717	lsm7 (ENSIPUG00000024724)	sass6 (ENSIPUG00000024737)	mfsd14a (ENSIPUG00000024745)	ENSIPUG00000024751	map1s (ENSIPUG00000024752)	CARTPT (ENSIPUG00000024756)
Characiphysae_b	ANCESTRAL SPECIES	25	ENSGT01030000234515.a.b.b.a ##22	ENSGT00940000163715.b	ENSGT00390000012078.a.a	ENSGT00950000182915.b.b.a.b.d	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00390000006932	ENSGT00940000157395	ENSGT00940000165866	ENSGT00940000160221.c	ENSGT00390000018319.a.b.b.b.b
Characoidei	ANCESTRAL SPECIES	26	ENSGT00950000183158.A	ENSGT01030000234515.a.b.b.a ##22	ENSGT00940000163715.b	ENSGT00390000012078.a.a	ENSGT00950000182915.b.b.a.b.d	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b #22	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b	ENSGT00940000157375.c	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00390000006932	ENSGT00940000157395	ENSGT00940000165866	ENSGT00390000004757	ENSGT00940000156389.a
Mexicana tetra	MODERN SPECIES	20	fbn2b (ENSAMXG00000021616)	cers4a (ENSAMXG00000021631) ##22	ENSAMXG00000021632	rad23ab (ENSAMXG00000021634)	ENSAMXG00000021635	ENSAMXG00000021636	cherp (ENSAMXG00000021637)	rx1 (ENSAMXG00000021639)	MATK (ENSAMXG00000021640)	ENSAMXG00000021641	ATCAY (ENSAMXG00000039401)	mibp (ENSAMXG00000021643)	loxl5a (ENSAMXG00000021644)	mydgf (ENSAMXG00000033685)	tnfaip8l1 (ENSAMXG00000021647)	CERS1 (ENSAMXG00000021648) #22	ncln (ENSAMXG00000021649)	s1pr4 (ENSAMXG00000025275)	MYO9B (ENSAMXG00000016576)	use1 (ENSAMXG00000037216)	insrb (ENSAMXG00000016228)	ARHGEF18 (ENSAMXG00000015886)	enc3 (ENSAMXG00000024846)	rsph3 (ENSAMXG00000037608)	timm13 (ENSAMXG00000040577)	ENSAMXG00000015716	lsm7 (ENSAMXG00000037622)	sass6 (ENSAMXG00000015631)	mfsd14a1 (ENSAMXG00000015606)	ENSAMXG00000015560	ppp1r2 (ENSAMXG00000033495)
Red-bellied piranha	MODERN SPECIES	84	ENSPNAG00000011089	ppp1r3ca (ENSPNAG00000011080)	pcgf5a (ENSPNAG00000011073)	ANKRD1 (ENSPNAG00000011047)	ENSPNAG00000011007	pank1a (ENSPNAG00000010982)	SLC16A12 (ENSPNAG00000001473)	rx1 (ENSPNAG00000010919)	MATK (ENSPNAG00000010897)	ZFR2 (ENSPNAG00000010884)	ATCAY (ENSPNAG00000010862)	mibp (ENSPNAG00000010845)	loxl5a (ENSPNAG00000010823)	mydgf (ENSPNAG00000010816)	tnfaip8l1 (ENSPNAG00000010811)	CERS1 (ENSPNAG00000010809) #22	ENSPNAG00000010777	ncln (ENSPNAG00000010726)	s1pr4 (ENSPNAG00000010665)	ENSPNAG00000010660	MYO9B (ENSPNAG00000005734)	use1 (ENSPNAG00000010471)	insrb (ENSPNAG00000010410)	ARHGEF18 (ENSPNAG00000001390)	enc3 (ENSPNAG00000001373)	timm13 (ENSPNAG00000010177)	ENSPNAG00000007029	lsm7 (ENSPNAG00000010141)	sass6 (ENSPNAG00000010108)	mfsd14a1 (ENSPNAG00000010025)	ENSPNAG00000009985
Electric eel	MODERN SPECIES	157	ENSEEEG00000010043	rad23ab (ENSEEEG00000010046)	ENSEEEG00000010141	cherp (ENSEEEG00000010143)	ENSEEEG00000010147	ENSEEEG00000010149	MATK (ENSEEEG00000010161)	ZFR2 (ENSEEEG00000010349)	ENSEEEG00000010353	ATCAY (ENSEEEG00000010356)	mibp (ENSEEEG00000010357)	ENSEEEG00000010359	ENSEEEG00000010361	mydgf (ENSEEEG00000010363)	tnfaip8l1 (ENSEEEG00000010364)	CERS1 (ENSEEEG00000010366) #22	ncln (ENSEEEG00000010373)	s1pr4 (ENSEEEG00000010385)	MYO9B (ENSEEEG00000010430)	use1 (ENSEEEG00000011343)	insrb (ENSEEEG00000011399)	ENSEEEG00000011765	enc3 (ENSEEEG00000011772)	timm13 (ENSEEEG00000011773)	ENSEEEG00000011775	lsm7 (ENSEEEG00000011778)	sass6 (ENSEEEG00000011815)	mfsd14a1 (ENSEEEG00000011933)	ENSEEEG00000011946	MAP1S (ENSEEEG00000011948)	ENSEEEG00000011953
Spotted gar	MODERN SPECIES	657	klf2a (ENSLOCG00000003791)	ap1m1 (ENSLOCG00000003821)	fam32a (ENSLOCG00000003843)	mrpl54 (ENSLOCG00000003860)	malt2 (ENSLOCG00000003877)	rx1 (ENSLOCG00000003889)	cplx4c (ENSLOCG00000003907)	MATK (ENSLOCG00000003919)	ZFR2 (ENSLOCG00000003939)	ATCAY (ENSLOCG00000003955)	mibp (ENSLOCG00000003973)	loxl5b (ENSLOCG00000003994)	mydgf (ENSLOCG00000004004)	tnfaip8l1 (ENSLOCG00000004018)	cope (ENSLOCG00000004027) #21	CERS1 (ENSLOCG00000004047) #22	ncln (ENSLOCG00000004061)	s1pr4 (ENSLOCG00000017630)	ENSLOCG00000004092	mfsd14a2 (ENSLOCG00000004101)	MYO9B (ENSLOCG00000004111)	use1 (ENSLOCG00000004161)	insrb (ENSLOCG00000004179)	ENSLOCG00000004244	enc3 (ENSLOCG00000017631)	ENSLOCG00000004259	ENSLOCG00000004281	timm13 (ENSLOCG00000004301)	TMPRSS9 (ENSLOCG00000004321)	sppl2 (ENSLOCG00000004334)	lsm7 (ENSLOCG00000004356)
Elephant shark	MODERN SPECIES	1549	ENSCMIG00000003802	celf5a (ENSCMIG00000003840)	haus8 (ENSCMIG00000003878)	ncln (ENSCMIG00000003894)	s1pr4 (ENSCMIG00000003921)	ENSCMIG00000003924	thop1 (ENSCMIG00000004031)	sgta (ENSCMIG00000004448)	SLC39A3 (ENSCMIG00000004466)	ENSCMIG00000004468	gng7 (ENSCMIG00000004472)	gadd45ba (ENSCMIG00000004477)	ENSCMIG00000004484	cope (ENSCMIG00000004520) #21	ENSCMIG00000004574	CERS1 (ENSCMIG00000004580) #22	use1 (ENSCMIG00000004590)	insrb (ENSCMIG00000004667)	ARHGEF18 (ENSCMIG00000004783)	enc3 (ENSCMIG00000004790)	PEX11G (ENSCMIG00000004793)	ENSCMIG00000004803	b3gnt3.4 (ENSCMIG00000004804)	ENSCMIG00000004806	ENSCMIG00000004808	ENSCMIG00000004883	slc5a5 (ENSCMIG00000005080)	nr2f6a (ENSCMIG00000005086)	hapln4 (ENSCMIG00000005087) #9	ENSCMIG00000005091 #10	nr2c2ap (ENSCMIG00000005100) #11