Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183195.a #22
Gnathostomata	ANCESTRAL SPECIES	603															ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00390000017294	ENSGT00950000182999.a
Euteleostomi	ANCESTRAL SPECIES	250				ENSGT00390000012939	ENSGT00940000154417	ENSGT00970000193437	ENSGT01080000257981	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B	ENSGT01050000244971.A	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24
Sarcopterygii	ANCESTRAL SPECIES	134				ENSGT00390000012939	ENSGT00940000154417	ENSGT00970000193437	ENSGT01080000257981	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B	ENSGT01050000244971.A	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00940000154721	ENSGT00940000153341	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000153675.a.b	ENSGT00940000153675.a.a.a.b	ENSGT00940000159654
Tetrapoda	ANCESTRAL SPECIES	44	ENSGT00960000190452	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00390000012939	ENSGT00940000154417	ENSGT00970000193437	ENSGT01080000257981	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26
Amniota	ANCESTRAL SPECIES	21	ENSGT00940000161938	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012939	ENSGT00940000154417	ENSGT00970000193437	ENSGT01080000257981	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT00970000193558	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00940000167236	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000163565	ENSGT00940000158724	ENSGT00950000183083.b
Mammalia	ANCESTRAL SPECIES	17	ENSGT00390000006521 #9	ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000164106	ENSGT00390000010674 #14	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00940000167236	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000163565	ENSGT00940000158724	ENSGT00950000183083.b
Theria	ANCESTRAL SPECIES	16	ENSGT00390000006521 #9	ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000164106	ENSGT00390000010674 #14	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00940000167236	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000163565
Eutheria	ANCESTRAL SPECIES		ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000163979	ENSGT00940000162571 #34	ENSGT00390000014553
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553
Glires	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553
Rodentia	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.f	ENSGT01030000234531.A.b.b.b.e.b
Rodentia_A	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.f	ENSGT01030000234531.A.b.b.b.e.b
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00940000170582 #33	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.b.c	ENSGT00390000014553	ENSGT00940000162160
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00940000170582 #33	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.g.b	ENSGT00940000157630.g.a
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00440000039706 #8	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00940000170582 #33	ENSGT00940000162571 #34
Long-tailed chinchilla	MODERN SPECIES	234	SZRD1 (ENSCLAG00000003038) #7	FBXO42 (ENSCLAG00000002198) #8	CPLANE2 (ENSCLAG00000002302) #9	ARHGEF19 (ENSCLAG00000002678) #10	EPHA2 (ENSCLAG00000003129) #11	FAM131C (ENSCLAG00000004083) #12	ENSCLAG00000004938 #13	HSPB7 (ENSCLAG00000005960) #14	ZBTB17 (ENSCLAG00000006044) #15	SPEN (ENSCLAG00000002018) #16	FBLIM1 (ENSCLAG00000003668) #17	TMEM82 (ENSCLAG00000004347) #18	SLC25A34 (ENSCLAG00000002647) #19	PLEKHM2 (ENSCLAG00000003128) #20	ENSCLAG00000003693 #21	AGMAT (ENSCLAG00000004055) #22	DNAJC16 (ENSCLAG00000002114) #23	CASP9 (ENSCLAG00000003082) #24	ENSCLAG00000010512 #25	CTRC (ENSCLAG00000010834) #26	EFHD2 (ENSCLAG00000014606) #27	FHAD1 (ENSCLAG00000012202) #28	TMEM51 (ENSCLAG00000003533) #29	ENSCLAG00000003684 #30	ENSCLAG00000003967 #31	PRDM2 (ENSCLAG00000004362) #32	ENSCLAG00000002299 #33	LRRC38 (ENSCLAG00000002559) #34
Degu	MODERN SPECIES	133	EPHA2 (ENSODEG00000016363) #11	FAM131C (ENSODEG00000016610) #12	ENSODEG00000016231 #13	HSPB7 (ENSODEG00000016081) #14	ENSODEG00000020349	ENSODEG00000016716	ENSODEG00000020337	ZBTB17 (ENSODEG00000016152) #15	SPEN (ENSODEG00000016644) #16	FBLIM1 (ENSODEG00000016558) #17	TMEM82 (ENSODEG00000016458) #18	SLC25A34 (ENSODEG00000016800) #19	PLEKHM2 (ENSODEG00000016981) #20	RSC1A1 (ENSODEG00000016320) #21	DDI2 (ENSODEG00000016549)	AGMAT (ENSODEG00000016792) #22	DNAJC16 (ENSODEG00000016313) #23	ENSODEG00000016480	ENSODEG00000016581 #25	ENSODEG00000020480	CTRC (ENSODEG00000016340) #26	EFHD2 (ENSODEG00000016306) #27	FHAD1 (ENSODEG00000016605) #28	TMEM51 (ENSODEG00000016454) #29	ENSODEG00000016473 #31	ENSODEG00000016425 #31	PRDM2 (ENSODEG00000017400) #32
Guinea pig	MODERN SPECIES	25	CPLANE2 (ENSCPOG00000040319) #9	ENSCPOG00000019656	EPHA2 (ENSCPOG00000003065) #11	FAM131C (ENSCPOG00000027194) #12	ENSCPOG00000010602 #13	HSPB7 (ENSCPOG00000034311) #14	SRARP (ENSCPOG00000036293)	ZBTB17 (ENSCPOG00000014042) #15	SPEN (ENSCPOG00000014036) #16	FBLIM1 (ENSCPOG00000024867) #17	TMEM82 (ENSCPOG00000012084) #18	SLC25A34 (ENSCPOG00000012078) #19	PLEKHM2 (ENSCPOG00000012069) #20	RSC1A1 (ENSCPOG00000012066) #21	DDI2 (ENSCPOG00000020885)	AGMAT (ENSCPOG00000026931) #22	DNAJC16 (ENSCPOG00000012059) #23	CASP9 (ENSCPOG00000012051) #24	ENSCPOG00000038747 #25	ENSCPOG00000039418 #25	CTRC (ENSCPOG00000034507) #26	EFHD2 (ENSCPOG00000022076) #27	FHAD1 (ENSCPOG00000014449) #28	TMEM51 (ENSCPOG00000035704) #29	ENSCPOG00000035462 #31	ENSCPOG00000007591 #31	PRDM2 (ENSCPOG00000038436) #32	ENSCPOG00000038973 #33	LRRC38 (ENSCPOG00000031681) #34	CFAP107 (ENSCPOG00000003643)	AADACL3 (ENSCPOG00000000228)
Naked mole-rat female	MODERN SPECIES	26	RSG1 (ENSHGLG00000034672) #9	ARHGEF19 (ENSHGLG00000012640) #10	EPHA2 (ENSHGLG00000012989) #11	FAM131C (ENSHGLG00000010221) #12	ENSHGLG00000012896 #13	HSPB7 (ENSHGLG00000035307) #14	ENSHGLG00000010058	ZBTB17 (ENSHGLG00000011895) #15	SPEN (ENSHGLG00000032487) #16	ENSHGLG00000014407	FBLIM1 (ENSHGLG00000019134) #17	TMEM82 (ENSHGLG00000011424) #18	SLC25A34 (ENSHGLG00000032560) #19	PLEKHM2 (ENSHGLG00000007190) #20	ENSHGLG00000038027 #21	AGMAT (ENSHGLG00000007473) #22	DNAJC16 (ENSHGLG00000014574) #23	CASP9 (ENSHGLG00000019310) #24	ENSHGLG00000016895 #25	CTRC (ENSHGLG00000018486) #26	EFHD2 (ENSHGLG00000046486) #27	FHAD1 (ENSHGLG00000018196) #28	TMEM51 (ENSHGLG00000013366) #29	ENSHGLG00000009940 #31	ENSHGLG00000035804	CPT2 (ENSHGLG00000003070)	ENSHGLG00000002034	ENSHGLG00000001648	LRP8 (ENSHGLG00000001818)	ENSHGLG00000041952	NDC1 (ENSHGLG00000001547)
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.f.b.b	ENSGT00390000014553	ENSGT00940000162160
Marmotini	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.c
Marmotini_b	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.c
Squirrel	MODERN SPECIES	74	ARHGEF19 (ENSSTOG00000026824) #10	EPHA2 (ENSSTOG00000003080) #11	FAM131C (ENSSTOG00000026095) #12	ENSSTOG00000022083 #13	HSPB7 (ENSSTOG00000028972) #14	SRARP (ENSSTOG00000015599)	ZBTB17 (ENSSTOG00000005696) #15	SPEN (ENSSTOG00000021428) #16	ENSSTOG00000029207	FBLIM1 (ENSSTOG00000028645) #17	TMEM82 (ENSSTOG00000025954) #18	SLC25A34 (ENSSTOG00000013833) #19	PLEKHM2 (ENSSTOG00000013821) #20	RSC1A1 (ENSSTOG00000025982) #21	DDI2 (ENSSTOG00000019447)	AGMAT (ENSSTOG00000013813) #22	DNAJC16 (ENSSTOG00000013804) #23	ENSSTOG00000028042	ENSSTOG00000021532 #25	ENSSTOG00000032931 #26	EFHD2 (ENSSTOG00000025403) #27	FHAD1 (ENSSTOG00000023646) #28	TMEM51 (ENSSTOG00000020167) #29	ENSSTOG00000030433 #31	ENSSTOG00000023112 #31	PRDM2 (ENSSTOG00000019848) #32	PDPN (ENSSTOG00000032629)	LRRC38 (ENSSTOG00000023111) #34	CFAP107 (ENSSTOG00000009816)	AADACL3 (ENSSTOG00000007059)	AADACL4 (ENSSTOG00000019534)
Arctic ground squirrel	MODERN SPECIES	236	FBXO42 (ENSUPAG00010017950) #8	CPLANE2 (ENSUPAG00010017964) #9	ARHGEF19 (ENSUPAG00010017982) #10	EPHA2 (ENSUPAG00010017996) #11	FAM131C (ENSUPAG00010018009) #12	ENSUPAG00010018021 #13	HSPB7 (ENSUPAG00010018035) #14	SRARP (ENSUPAG00010018039)	ZBTB17 (ENSUPAG00010018044) #15	SPEN (ENSUPAG00010018064) #16	FBLIM1 (ENSUPAG00010018076) #17	TMEM82 (ENSUPAG00010018085) #18	SLC25A34 (ENSUPAG00010018099) #19	PLEKHM2 (ENSUPAG00010018117) #20	ENSUPAG00010018182 #21	AGMAT (ENSUPAG00010018210) #22	DNAJC16 (ENSUPAG00010018220) #23	CASP9 (ENSUPAG00010018242) #24	ENSUPAG00010018260 #25
Alpin marmot	MODERN SPECIES	15	ENSMMMG00000021379	CPLANE2 (ENSMMMG00000021380) #9	ARHGEF19 (ENSMMMG00000021384) #10	EPHA2 (ENSMMMG00000021393) #11	FAM131C (ENSMMMG00000021619) #12	ENSMMMG00000021622 #13	HSPB7 (ENSMMMG00000021631) #14	SRARP (ENSMMMG00000021634)	ZBTB17 (ENSMMMG00000021636) #15	ENSMMMG00000021647	FBLIM1 (ENSMMMG00000021649) #17	TMEM82 (ENSMMMG00000021661) #18	SLC25A34 (ENSMMMG00000021668) #19	PLEKHM2 (ENSMMMG00000021689) #20	DDI2 (ENSMMMG00000021707)	AGMAT (ENSMMMG00000021713) #22	DNAJC16 (ENSMMMG00000021719) #23	CASP9 (ENSMMMG00000021730) #24	ENSMMMG00000021744 #25	EFHD2 (ENSMMMG00000021754) #27	FHAD1 (ENSMMMG00000021774) #28	TMEM51 (ENSMMMG00000021802) #29	KAZN (ENSMMMG00000021835) #31	PRDM2 (ENSMMMG00000021858) #32	ENSMMMG00000021882	LRRC38 (ENSMMMG00000021887) #34
Eurasian red squirrel	MODERN SPECIES		CPLANE2 (ENSSVLG00005000646) #9	ARHGEF19 (ENSSVLG00005000627) #10	EPHA2 (ENSSVLG00005000603) #11	FAM131C (ENSSVLG00005000572) #12	ENSSVLG00005000408 #13	HSPB7 (ENSSVLG00005000082) #14	SRARP (ENSSVLG00005010560)	ZBTB17 (ENSSVLG00005010439) #15	SPEN (ENSSVLG00005010400) #16	FBLIM1 (ENSSVLG00005010292) #17	TMEM82 (ENSSVLG00005010237) #18	SLC25A34 (ENSSVLG00005010194) #19	PLEKHM2 (ENSSVLG00005010150) #20	RSC1A1 (ENSSVLG00005010092) #21	DDI2 (ENSSVLG00005010074)	AGMAT (ENSSVLG00005010003) #22	ENSSVLG00005009978	DNAJC16 (ENSSVLG00005009925) #23	ENSSVLG00005009886	ENSSVLG00005009810 #25	ENSSVLG00005009617 #25	CTRC (ENSSVLG00005009531) #26	EFHD2 (ENSSVLG00005009504) #27	FHAD1 (ENSSVLG00005009255) #28	TMEM51 (ENSSVLG00005009207) #29	KAZN (ENSSVLG00005008929) #31	PRDM2 (ENSSVLG00005008674) #32	PDPN (ENSSVLG00005008527)	LRRC38 (ENSSVLG00005008488) #34	ENSSVLG00005008079	CFAP107 (ENSSVLG00005007956)
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.e.b
Kangaroo rat	MODERN SPECIES	380					ENSDORG00000029189 #13	ENSDORG00000023186 #13	Hspb7 (ENSDORG00000009697) #14	Zbtb17 (ENSDORG00000008306) #15	Spen (ENSDORG00000023909) #16	Fblim1 (ENSDORG00000002591) #17	Tmem82 (ENSDORG00000008854) #18	Slc25a34 (ENSDORG00000008853) #19	Plekhm2 (ENSDORG00000008849) #20	ENSDORG00000027846 #21	ENSDORG00000012305	Agmat (ENSDORG00000003970) #22	Dnajc16 (ENSDORG00000003972) #23	ENSDORG00000003973	Cela2a (ENSDORG00000006593) #25	ENSDORG00000016574 #26	Efhd2 (ENSDORG00000026861) #27	Fhad1 (ENSDORG00000005392) #28	Tmem51 (ENSDORG00000015453) #29	ENSDORG00000023515 #31	ENSDORG00000016542 #31	Prdm2 (ENSDORG00000012558) #32	ENSDORG00000011209	Yipf1 (ENSDORG00000015262)	Dio1 (ENSDORG00000015264)	Hspb11 (ENSDORG00000015267)	Lrrc42 (ENSDORG00000004216)
Myomorpha	ANCESTRAL SPECIES	3	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.f #13	ENSGT00940000158748.e #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.e.b
Lesser Egyptian jerboa	MODERN SPECIES	63	Epha2 (ENSJJAG00000009210) #11	Fam131c (ENSJJAG00000020340) #12	Clcnka (ENSJJAG00000022871) #13	Clcnkb (ENSJJAG00000011382) #13	Hspb7 (ENSJJAG00000022470) #14	ENSJJAG00000014068	ENSJJAG00000007887	Zbtb17 (ENSJJAG00000008918) #15	Spen (ENSJJAG00000010882) #16	Fblim1 (ENSJJAG00000013123) #17	Tmem82 (ENSJJAG00000011441) #18	Slc25a34 (ENSJJAG00000001837) #19	Plekhm2 (ENSJJAG00000009735) #20	ENSJJAG00000002222 #21	ENSJJAG00000008758	Agmat (ENSJJAG00000000771) #22	Dnajc16 (ENSJJAG00000007639) #23	ENSJJAG00000010832	Cela2a (ENSJJAG00000012004) #25	ENSJJAG00000011961 #26	Efhd2 (ENSJJAG00000005238) #27	Fhad1 (ENSJJAG00000011545) #28	Tmem51 (ENSJJAG00000007750) #29	Kazn (ENSJJAG00000013027) #31	Prdm2 (ENSJJAG00000013245) #32	Pdpn (ENSJJAG00000011298)	Lrrc38 (ENSJJAG00000010300) #34	ENSJJAG00000007952	ENSJJAG00000011316	ENSJJAG00000013886	Cfap107 (ENSJJAG00000012706)
Muroidea	ANCESTRAL SPECIES	3	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.f #13	ENSGT00940000158748.e #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.a.b	ENSGT01030000234531.A.b.b.b.e.b
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.f #13	ENSGT00940000158748.e #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b
Cricetidae	ANCESTRAL SPECIES	2	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.f #13	ENSGT00940000158748.e #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.f #13	ENSGT00940000158748.e #13	ENSGT00390000010674 #14	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b
Prairie vole	MODERN SPECIES	1	Szrd1 (ENSMOCG00000014138) #7	Fbxo42 (ENSMOCG00000021880) #8	Cplane2 (ENSMOCG00000011402) #9	Arhgef19 (ENSMOCG00000015816) #10	Epha2 (ENSMOCG00000015770) #11	Fam131c (ENSMOCG00000022229) #12	Clcnka (ENSMOCG00000012067) #13	Clcnkb (ENSMOCG00000016948) #13	Hspb7 (ENSMOCG00000015401) #14	Zbtb17 (ENSMOCG00000005017) #15	Spen (ENSMOCG00000016083) #16	Tmem82 (ENSMOCG00000004076) #18	Slc25a34 (ENSMOCG00000001770) #19	Plekhm2 (ENSMOCG00000016353) #20	ENSMOCG00000008741	Agmat (ENSMOCG00000006579) #22	Dnajc16 (ENSMOCG00000018345) #23	Casp9 (ENSMOCG00000020323) #24	Cela2a (ENSMOCG00000019141) #25	ENSMOCG00000006919 #26	Efhd2 (ENSMOCG00000002945) #27	Fhad1 (ENSMOCG00000015308) #28	Tmem51 (ENSMOCG00000009847) #29	ENSMOCG00000007192 #31	ENSMOCG00000002830 #31	ENSMOCG00000021077 #32	ENSMOCG00000018838 #33	ENSMOCG00000015618	Lrrc38 (ENSMOCG00000014237) #34	ENSMOCG00000016039	Gpr82 (ENSMOCG00000003874)
Northern American deer mouse	MODERN SPECIES	11	Cplane2 (ENSPEMG00000025447) #9	Arhgef19 (ENSPEMG00000023456) #10	Epha2 (ENSPEMG00000023679) #11	Fam131c (ENSPEMG00000013548) #12	Clcnka (ENSPEMG00000000336) #13	Clcnkb (ENSPEMG00000014383) #13	Hspb7 (ENSPEMG00000026381) #14	Zbtb17 (ENSPEMG00000021923) #15	Spen (ENSPEMG00000022997) #16	Fblim1 (ENSPEMG00000022333) #17	Tmem82 (ENSPEMG00000021877) #18	Slc25a34 (ENSPEMG00000009951) #19	Plekhm2 (ENSPEMG00000024198) #20	ENSPEMG00000029595 #21	ENSPEMG00000021491	Agmat (ENSPEMG00000022206) #22	Dnajc16 (ENSPEMG00000023576) #23	Casp9 (ENSPEMG00000022246) #24	Cela2a (ENSPEMG00000023249) #25	ENSPEMG00000009764 #25	Efhd2 (ENSPEMG00000001500) #27	Fhad1 (ENSPEMG00000005222) #28	Tmem51 (ENSPEMG00000031341) #29	Kazn (ENSPEMG00000021311) #31	ENSPEMG00000028452 ##31	Prdm2 (ENSPEMG00000023130) #32	Pdpn (ENSPEMG00000007524)	Lrrc38 (ENSPEMG00000027448) #34	Pramel1 (ENSPEMG00000021753)	ENSPEMG00000025426	Pramel12 (ENSPEMG00000023636)
Cricetinae	ANCESTRAL SPECIES	5	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.f #13	ENSGT00940000158748.e #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.b.a	ENSGT01030000234531.A.b.b.b.e.b
Chinese hamster chok1gshd	MODERN SPECIES	111	Cplane2 (ENSCGRG00001019934) #9	Arhgef19 (ENSCGRG00001019303) #10	Epha2 (ENSCGRG00001017870) #11	Fam131c (ENSCGRG00001016101) #12	Clcnka (ENSCGRG00001008237) #13	Clcnkb (ENSCGRG00001017765) #13	Hspb7 (ENSCGRG00001015438) #14	Srarp (ENSCGRG00001024454)	Zbtb17 (ENSCGRG00001019408) #15	Spen (ENSCGRG00001007725) #16	Fblim1 (ENSCGRG00001024160) #17	Tmem82 (ENSCGRG00001022720) #18	Slc25a34 (ENSCGRG00001021299) #19	Plekhm2 (ENSCGRG00001011209) #20	ENSCGRG00001024250 #21	Agmat (ENSCGRG00001022077) #22	Dnajc16 (ENSCGRG00001019382) #23	Casp9 (ENSCGRG00001012293) #24	ENSCGRG00001024391 #25	ENSCGRG00001018143 #26	Efhd2 (ENSCGRG00001016692) #27	Fhad1 (ENSCGRG00001024955) #28	ENSCGRG00001024256 #31	Tmem51 (ENSCGRG00001023938) #29	ENSCGRG00001022553 #31	Prdm2 (ENSCGRG00001020470) #32	Pdpn (ENSCGRG00001019750)	Lrrc38 (ENSCGRG00001015382) #34	Pramel1 (ENSCGRG00001003207)	Pramel12 (ENSCGRG00001024998)	Pramel15 (ENSCGRG00001024569)
Golden Hamster	MODERN SPECIES	726	Fbxo42 (ENSMAUG00000018977) #8	Cplane2 (ENSMAUG00000020921) #9	Arhgef19 (ENSMAUG00000021130) #10	Epha2 (ENSMAUG00000009598) #11	Fam131c (ENSMAUG00000021505) #12	Clcnka (ENSMAUG00000017605) #13	Clcnkb (ENSMAUG00000000874) #13	Hspb7 (ENSMAUG00000010732) #14	Zbtb17 (ENSMAUG00000001376) #15	Spen (ENSMAUG00000008318) #16	Fblim1 (ENSMAUG00000018139) #17	Tmem82 (ENSMAUG00000007567) #18	Slc25a34 (ENSMAUG00000020022) #19	Plekhm2 (ENSMAUG00000010838) #20	ENSMAUG00000020325	Agmat (ENSMAUG00000022247) #22	Dnajc16 (ENSMAUG00000021653) #23	Casp9 (ENSMAUG00000014326) #24	Cela2a (ENSMAUG00000010885) #25	ENSMAUG00000007283 #26	Efhd2 (ENSMAUG00000001147) #27	Fhad1 (ENSMAUG00000001064) #28	Tmem51 (ENSMAUG00000007940) #29	ENSMAUG00000010094 #31	ENSMAUG00000009108 #31	Prdm2 (ENSMAUG00000017021) #32	Pdpn (ENSMAUG00000013176)	Lrrc38 (ENSMAUG00000019684) #34	Pramel1 (ENSMAUG00000017344)	Pramel12 (ENSMAUG00000013165)
Murinae	ANCESTRAL SPECIES	2	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.f #13	ENSGT00940000158748.e #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b
Mus	ANCESTRAL SPECIES	3	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.f #13	ENSGT00940000158748.e #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b
Mus_A	ANCESTRAL SPECIES	3	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.f #13	ENSGT00940000158748.e #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.f #13	ENSGT00940000158748.e #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.f #13	ENSGT00940000158748.e #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.a
Steppe mouse	MODERN SPECIES	3329	Cplane2 (ENSMSIG00000013945) #9	Arhgef19 (ENSMSIG00000013963) #10	Epha2 (ENSMSIG00000014018) #11	Fam131c (ENSMSIG00000014039) #12	Clcnka (ENSMSIG00000014055) #13	Clcnkb (ENSMSIG00000014099) #13	Hspb7 (ENSMSIG00000014140) #14	Srarp (ENSMSIG00000014155)	Zbtb17 (ENSMSIG00000014168) #15	Spen (ENSMSIG00000014208) #16	Fblim1 (ENSMSIG00000014313) #17	Tmem82 (ENSMSIG00000014350) #18	Slc25a34 (ENSMSIG00000014377) #19	Plekhm2 (ENSMSIG00000014394) #20	ENSMSIG00000014561 #21	Agmat (ENSMSIG00000014614) #22	Dnajc16 (ENSMSIG00000014635) #23	Casp9 (ENSMSIG00000014653) #24	Cela2a (ENSMSIG00000014686) #25	ENSMSIG00000014707 #26	Efhd2 (ENSMSIG00000014750) #27	Fhad1 (ENSMSIG00000014775) #28	Tmem51 (ENSMSIG00000015190) #29	ENSMSIG00000015199	Kazn (ENSMSIG00000015206) #31	ENSMSIG00000015235 ##31	Prdm2 (ENSMSIG00000015257) #32	ENSMSIG00000015307	Pdpn (ENSMSIG00000015317)	ENSMSIG00000015393 #34	Pramel1 (ENSMSIG00000015411)
spretus	MODERN SPECIES	13	Cplane2 (MGP_SPRETEiJ_G0027716) #9	Arhgef19 (MGP_SPRETEiJ_G0027717) #10	Epha2 (MGP_SPRETEiJ_G0027718) #11	Fam131c (MGP_SPRETEiJ_G0027719) #12	Clcnka (MGP_SPRETEiJ_G0027720) #13	Clcnkb (MGP_SPRETEiJ_G0027721) #13	Hspb7 (MGP_SPRETEiJ_G0027722) #14	Zbtb17 (MGP_SPRETEiJ_G0027723) #15	Spen (MGP_SPRETEiJ_G0027724) #16	Fblim1 (MGP_SPRETEiJ_G0027725) #17	Tmem82 (MGP_SPRETEiJ_G0027726) #18	Slc25a34 (MGP_SPRETEiJ_G0027727) #19	Plekhm2 (MGP_SPRETEiJ_G0027728) #20	MGP_SPRETEiJ_G0027729 #21	MGP_SPRETEiJ_G0027730 #21	Agmat (MGP_SPRETEiJ_G0027731) #22	Dnajc16 (MGP_SPRETEiJ_G0027732) #23	Casp9 (MGP_SPRETEiJ_G0027733) #24	Cela2a (MGP_SPRETEiJ_G0027734) #25	MGP_SPRETEiJ_G0027735	Efhd2 (MGP_SPRETEiJ_G0027736) #27	Fhad1 (MGP_SPRETEiJ_G0027737) #28	Tmem51 (MGP_SPRETEiJ_G0027738) #29	Kazn (MGP_SPRETEiJ_G0027739) #31	Prdm2 (MGP_SPRETEiJ_G0027740) #32	Pdpn (MGP_SPRETEiJ_G0027741)	Lrrc38 (MGP_SPRETEiJ_G0027742) #34	Pramel1 (MGP_SPRETEiJ_G0027743)	Pramel12 (MGP_SPRETEiJ_G0027744)	Oog4 (MGP_SPRETEiJ_G0027745)	MGP_SPRETEiJ_G0027746
Mouse	MODERN SPECIES	13	Arhgef19 (ENSMUSG00000028919) #10	Epha2 (ENSMUSG00000006445) #11	Fam131c (ENSMUSG00000006218) #12	Clcnka (ENSMUSG00000033770) #13	Clcnkb (ENSMUSG00000006216) #13	Hspb7 (ENSMUSG00000006221) #14	Srarp (ENSMUSG00000070637)	Zbtb17 (ENSMUSG00000006215) #15	Spen (ENSMUSG00000040761) #16	Fblim1 (ENSMUSG00000006219) #17	Tmem82 (ENSMUSG00000043085) #18	Slc25a34 (ENSMUSG00000040740) #19	Plekhm2 (ENSMUSG00000028917) #20	Ddi2 (ENSMUSG00000078515) #21	Rsc1a1 (ENSMUSG00000040715) #21	Agmat (ENSMUSG00000040706) #22	Dnajc16 (ENSMUSG00000040697) #23	Casp9 (ENSMUSG00000028914) #24	Cela2a (ENSMUSG00000058579) #25	Ctrc (ENSMUSG00000062478)	Efhd2 (ENSMUSG00000040659) #27	Fhad1 (ENSMUSG00000051435) #28	Tmem51 (ENSMUSG00000040616) #29	Kazn (ENSMUSG00000040606) #31	6330411D24Rik (ENSMUSG00000110067)	Prdm2 (ENSMUSG00000057637) #32	Pdpn (ENSMUSG00000028583)	Lrrc38 (ENSMUSG00000028584) #34	Pramel1 (ENSMUSG00000041805)	Pramel12 (ENSMUSG00000046862)	Oog4 (ENSMUSG00000047799)
Ryukyu mouse	MODERN SPECIES	13	MGP_CAROLIEiJ_G0026737	Epha2 (MGP_CAROLIEiJ_G0026738) #11	Fam131c (MGP_CAROLIEiJ_G0026739) #12	Clcnka (MGP_CAROLIEiJ_G0026740) #13	Clcnkb (MGP_CAROLIEiJ_G0026741) #13	Hspb7 (MGP_CAROLIEiJ_G0026742) #14	Srarp (MGP_CAROLIEiJ_G0026743)	Zbtb17 (MGP_CAROLIEiJ_G0026744) #15	Spen (MGP_CAROLIEiJ_G0026745) #16	Fblim1 (MGP_CAROLIEiJ_G0026746) #17	Tmem82 (MGP_CAROLIEiJ_G0026747) #18	Slc25a34 (MGP_CAROLIEiJ_G0026748) #19	Plekhm2 (MGP_CAROLIEiJ_G0026749) #20	MGP_CAROLIEiJ_G0026750 #21	MGP_CAROLIEiJ_G0026751 #21	Agmat (MGP_CAROLIEiJ_G0026752) #22	Dnajc16 (MGP_CAROLIEiJ_G0026753) #23	MGP_CAROLIEiJ_G0026754 #24	MGP_CAROLIEiJ_G0026755	Efhd2 (MGP_CAROLIEiJ_G0026756) #27	Fhad1 (MGP_CAROLIEiJ_G0026757) #28	Tmem51 (MGP_CAROLIEiJ_G0026758) #29	Kazn (MGP_CAROLIEiJ_G0026759) #31	Prdm2 (MGP_CAROLIEiJ_G0026760) #32	Pdpn (MGP_CAROLIEiJ_G0026761)	Lrrc38 (MGP_CAROLIEiJ_G0026762) #34	Pramel1 (MGP_CAROLIEiJ_G0026763)	Pramel12 (MGP_CAROLIEiJ_G0026764)	Oog4 (MGP_CAROLIEiJ_G0026765)	MGP_CAROLIEiJ_G0026766	MGP_CAROLIEiJ_G0026767
Shrew mouse	MODERN SPECIES	19	MGP_PahariEiJ_G0029068	Epha2 (MGP_PahariEiJ_G0029069) #11	Fam131c (MGP_PahariEiJ_G0029070) #12	Clcnka (MGP_PahariEiJ_G0029071) #13	Clcnkb (MGP_PahariEiJ_G0029072) #13	Hspb7 (MGP_PahariEiJ_G0029073) #14	MGP_PahariEiJ_G0029074	Zbtb17 (MGP_PahariEiJ_G0029075) #15	Spen (MGP_PahariEiJ_G0029076) #16	Fblim1 (MGP_PahariEiJ_G0029077) #17	Tmem82 (MGP_PahariEiJ_G0029078) #18	Slc25a34 (MGP_PahariEiJ_G0029079) #19	Plekhm2 (MGP_PahariEiJ_G0029080) #20	MGP_PahariEiJ_G0029081 #21	MGP_PahariEiJ_G0029082 #21	Agmat (MGP_PahariEiJ_G0029083) #22	Dnajc16 (MGP_PahariEiJ_G0029084) #23	Casp9 (MGP_PahariEiJ_G0029085) #24	Cela2a (MGP_PahariEiJ_G0029086) #25	MGP_PahariEiJ_G0029087	Efhd2 (MGP_PahariEiJ_G0029088) #27	Fhad1 (MGP_PahariEiJ_G0029089) #28	Tmem51 (MGP_PahariEiJ_G0029090) #29	Kazn (MGP_PahariEiJ_G0029091) #31	Prdm2 (MGP_PahariEiJ_G0029092) #32	Pdpn (MGP_PahariEiJ_G0029093)	Lrrc38 (MGP_PahariEiJ_G0029094) #34	Pramel1 (MGP_PahariEiJ_G0029095)	Pramel12 (MGP_PahariEiJ_G0029096)	MGP_PahariEiJ_G0029097	MGP_PahariEiJ_G0029098
Rat	MODERN SPECIES	15	Cplane2 (ENSRNOG00000023346) #9	Arhgef19 (ENSRNOG00000047967) #10	Epha2 (ENSRNOG00000009222) #11	Rps27a-ps2 (ENSRNOG00000051047)	Fam131c (ENSRNOG00000023008) #12	Clcnka (ENSRNOG00000052368) #13	Clcnkb (ENSRNOG00000009897) #13	Hspb7 (ENSRNOG00000029079) #14	AC120594.1 (ENSRNOG00000054155)	Zbtb17 (ENSRNOG00000010436) #15	Spen (ENSRNOG00000033556) #16	Fblim1 (ENSRNOG00000011774) #17	Tmem82 (ENSRNOG00000011970) #18	Plekhm2 (ENSRNOG00000012163) #20	Ddi2 (ENSRNOG00000012274) #21	Agmat (ENSRNOG00000012315) #22	Dnajc16 (ENSRNOG00000012503) #23	Casp9 (ENSRNOG00000012944) #24	Cela2a (ENSRNOG00000013628) #25	Ctrc (ENSRNOG00000013745) #26	Efhd2 (ENSRNOG00000013783) #27	Fhad1 (ENSRNOG00000028064) #28	Tmem51 (ENSRNOG00000014197) #29	ENSRNOG00000070661	Kazn (ENSRNOG00000014322) #31	6330411D24Rik (ENSRNOG00000065736)	Prdm2 (ENSRNOG00000033522) #32	LOC100359951 (ENSRNOG00000071148)	ENSRNOG00000070725	Pdpn (ENSRNOG00000014961)	Lrrc38 (ENSRNOG00000015264) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	1803	Cplane2 (ENSNGAG00000015230) #9	Arhgef19 (ENSNGAG00000018558) #10	Epha2 (ENSNGAG00000014151) #11	Fam131c (ENSNGAG00000011458) #12	Clcnka (ENSNGAG00000015479) #13	Clcnkb (ENSNGAG00000006923) #13	Hspb7 (ENSNGAG00000015943) #14	Zbtb17 (ENSNGAG00000000614) #15	Spen (ENSNGAG00000000641) #16	Fblim1 (ENSNGAG00000017164) #17	Tmem82 (ENSNGAG00000020347) #18	Slc25a34 (ENSNGAG00000019484) #19	Plekhm2 (ENSNGAG00000018802) #20	ENSNGAG00000011605 #21	ENSNGAG00000008573	Agmat (ENSNGAG00000006410) #22	Dnajc16 (ENSNGAG00000013158) #23	Casp9 (ENSNGAG00000003405) #24	Cela2a (ENSNGAG00000019296) #25	ENSNGAG00000020581 #26	Efhd2 (ENSNGAG00000018634) #27	Fhad1 (ENSNGAG00000002450) #28	Tmem51 (ENSNGAG00000012512) #29	ENSNGAG00000018275 #31	ENSNGAG00000013647 #31
Lagomorpha	ANCESTRAL SPECIES	144		ENSGT00390000005532.e.b ##7	ENSGT00440000039706 #8	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00390000015175 #20	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29
Rabbit	MODERN SPECIES	524	SPATA21 (ENSOCUG00000003478)	ENSOCUG00000028077 ##7	FBXO42 (ENSOCUG00000011408) #8	CPLANE2 (ENSOCUG00000013650) #9	ARHGEF19 (ENSOCUG00000023000) #10	EPHA2 (ENSOCUG00000000786) #11	FAM131C (ENSOCUG00000004252) #12	ENSOCUG00000004245 #13	HSPB7 (ENSOCUG00000010852) #14	SRARP (ENSOCUG00000010850)	ZBTB17 (ENSOCUG00000026236) #15	SPEN (ENSOCUG00000010840) #16	FBLIM1 (ENSOCUG00000011817) #17	TMEM82 (ENSOCUG00000004586) #18	PLEKHM2 (ENSOCUG00000004574) #20	AGMAT (ENSOCUG00000026657) #22	DNAJC16 (ENSOCUG00000016060) #23	CASP9 (ENSOCUG00000016047) #24	ENSOCUG00000025248 #25	CTRC (ENSOCUG00000016035) #26	EFHD2 (ENSOCUG00000026564) #27	FHAD1 (ENSOCUG00000007849) #28	TMEM51 (ENSOCUG00000002279) #29
Pika	MODERN SPECIES	1782																AGMAT (ENSOPRG00000009482) #22	DNAJC16 (ENSOPRG00000009461) #23	ENSOPRG00000009441 #24	ENSOPRG00000018849 #25	CTRC (ENSOPRG00000009429) #26	EFHD2 (ENSOPRG00000009415) #27
Tree shrew	MODERN SPECIES	658																AGMAT (ENSTBEG00000006983) #22	DNAJC16 (ENSTBEG00000006302) #23
Primates	ANCESTRAL SPECIES	4	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00390000002770	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b	ENSGT01030000234531.A.b.b.b.b.a
Lemuriformes	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a.a	ENSGT01030000234531.A.b.b.b.b.b.a	ENSGT01030000234531.A.b.b.b.a.b
Lemuriformes_a	ANCESTRAL SPECIES	7	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a.a	ENSGT01030000234531.A.b.b.b.b.b.b	ENSGT01030000234531.A.b.b.b.b.a
Coquerels sifaka	MODERN SPECIES	900	FBXO42 (ENSPCOG00000025130) #8	CPLANE2 (ENSPCOG00000018998) #9	ARHGEF19 (ENSPCOG00000019965) #10	EPHA2 (ENSPCOG00000016618) #11	FAM131C (ENSPCOG00000025510) #12	ENSPCOG00000024386 #13	HSPB7 (ENSPCOG00000020169) #14	SRARP (ENSPCOG00000024435)	ZBTB17 (ENSPCOG00000003554) #15	SPEN (ENSPCOG00000021735) #16	FBLIM1 (ENSPCOG00000021197) #17	TMEM82 (ENSPCOG00000012886) #18	SLC25A34 (ENSPCOG00000017561) #19	PLEKHM2 (ENSPCOG00000023290) #20	DDI2 (ENSPCOG00000011783)	AGMAT (ENSPCOG00000005823) #22	DNAJC16 (ENSPCOG00000021369) #23	CASP9 (ENSPCOG00000027379) #24	ENSPCOG00000018911 #25	CTRC (ENSPCOG00000014099) #26	EFHD2 (ENSPCOG00000014457) #27	FHAD1 (ENSPCOG00000017698) #28	TMEM51 (ENSPCOG00000025555) #29	KAZN (ENSPCOG00000025583) #31	PRDM2 (ENSPCOG00000023710) #32	PDPN (ENSPCOG00000022665)	LRRC38 (ENSPCOG00000023206) #34	ENSPCOG00000015938	ENSPCOG00000028711	ENSPCOG00000028229	ENSPCOG00000023311
Mouse lemur	MODERN SPECIES	11	ENSMICG00000036237	CPLANE2 (ENSMICG00000043831) #9	ARHGEF19 (ENSMICG00000042882) #10	EPHA2 (ENSMICG00000016876) #11	FAM131C (ENSMICG00000017851) #12	ENSMICG00000017850 #13	HSPB7 (ENSMICG00000007104) #14	SRARP (ENSMICG00000026862)	ZBTB17 (ENSMICG00000001933) #15	SPEN (ENSMICG00000030994) #16	FBLIM1 (ENSMICG00000007384) #17	TMEM82 (ENSMICG00000044062) #18	SLC25A34 (ENSMICG00000036236) #19	PLEKHM2 (ENSMICG00000013125) #20	RSC1A1 (ENSMICG00000013122) #21	AGMAT (ENSMICG00000045332) #22	DNAJC16 (ENSMICG00000003462) #23	CASP9 (ENSMICG00000003854) #24	ENSMICG00000046629 #25	CTRC (ENSMICG00000003309) #26	EFHD2 (ENSMICG00000030850) #27	FHAD1 (ENSMICG00000003833) #28	TMEM51 (ENSMICG00000033140) #29	KAZN (ENSMICG00000003804) #31	PRDM2 (ENSMICG00000017803) #32	ENSMICG00000017804	LRRC38 (ENSMICG00000046922) #34	ENSMICG00000011663	ENSMICG00000047522	DHRS3 (ENSMICG00000012203)	VPS13D (ENSMICG00000012119)
Bushbaby	MODERN SPECIES	124	FBXO42 (ENSOGAG00000005095) #8	CPLANE2 (ENSOGAG00000005092) #9	ARHGEF19 (ENSOGAG00000005086) #10	EPHA2 (ENSOGAG00000005079) #11	FAM131C (ENSOGAG00000007162) #12	ENSOGAG00000007158 #13	HSPB7 (ENSOGAG00000027227) #14	SRARP (ENSOGAG00000031033)	ZBTB17 (ENSOGAG00000005075) #15	SPEN (ENSOGAG00000025110) #16	TMEM82 (ENSOGAG00000008573) #18	SLC25A34 (ENSOGAG00000033455) #19	PLEKHM2 (ENSOGAG00000008570) #20	RSC1A1 (ENSOGAG00000005439) #21	DDI2 (ENSOGAG00000027709)	AGMAT (ENSOGAG00000005438) #22	DNAJC16 (ENSOGAG00000005431) #23	CASP9 (ENSOGAG00000009809) #24	ENSOGAG00000029665 #25	CTRC (ENSOGAG00000009802) #26	EFHD2 (ENSOGAG00000025793) #27	ENSOGAG00000025217 #28	TMEM51 (ENSOGAG00000009791) #29	KAZN (ENSOGAG00000007214) #31	ADAMTS5 (ENSOGAG00000013024)	ADAMTS1 (ENSOGAG00000029316)	ENSOGAG00000033847	GABPA (ENSOGAG00000001648)	JAM2 (ENSOGAG00000001645)	MRPL39 (ENSOGAG00000001642)	NCAM2 (ENSOGAG00000002889)
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b	ENSGT01030000234531.A.b.b.b.b.a	ENSGT00390000014553
Tarsier	MODERN SPECIES	4382												TMEM82 (ENSTSYG00000031235) #18	SLC25A34 (ENSTSYG00000037347) #19	PLEKHM2 (ENSTSYG00000002774) #20	DDI2 (ENSTSYG00000032126)	AGMAT (ENSTSYG00000009912) #22	DNAJC16 (ENSTSYG00000009900) #23	CASP9 (ENSTSYG00000002810) #24	ENSTSYG00000007324 #25	ENSTSYG00000034080 #25	PRCP (ENSTSYG00000002200)
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.b.b.f	ENSGT01030000234531.A.b.b.b.b.a
Platyrrhini	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.c #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b.v #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.e.b	ENSGT01030000234531.A.b.b.b.b.a	ENSGT00390000014553
Cebidae	ANCESTRAL SPECIES	1	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.d #13	ENSGT00940000158748.c #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b.v #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.e.b	ENSGT00390000014553	ENSGT00940000162160
Marmoset	MODERN SPECIES	19	ARHGEF19 (ENSCJAG00000008325) #10	EPHA2 (ENSCJAG00000008362) #11	FAM131C (ENSCJAG00000008417) #12	ENSCJAG00000081309 #13	ENSCJAG00000008426 #13	SRARP (ENSCJAG00000082259)	ZBTB17 (ENSCJAG00000008499) #15	ENSCJAG00000087159 #14	SPEN (ENSCJAG00000008527) #16	FBLIM1 (ENSCJAG00000008580) #17	TMEM82 (ENSCJAG00000008582) #18	SLC25A34 (ENSCJAG00000008596) #19	PLEKHM2 (ENSCJAG00000008601) #20	RSC1A1 (ENSCJAG00000040229) #21	DDI2 (ENSCJAG00000008625)	AGMAT (ENSCJAG00000008645) #22	ENSCJAG00000084076	DNAJC16 (ENSCJAG00000008656) #23	CASP9 (ENSCJAG00000008732) #24	ENSCJAG00000008785 #25	CTRC (ENSCJAG00000008844) #26	EFHD2 (ENSCJAG00000068517) #27	FHAD1 (ENSCJAG00000008888) #28	TMEM51 (ENSCJAG00000008910) #29	KAZN (ENSCJAG00000008920) #31	PRDM2 (ENSCJAG00000013782) #32	PDPN (ENSCJAG00000013772)	LRRC38 (ENSCJAG00000013769) #34	ENSCJAG00000013747	CFAP107 (ENSCJAG00000040949)	ENSCJAG00000013722
Cebidae_a	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.c #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b.v #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a	ENSGT01030000234531.A.b.b.b.b.b.e.b	ENSGT00390000014553	ENSGT00940000162160
Capuchin	MODERN SPECIES	15	FBXO42 (ENSCCAG00000021847) #8	CPLANE2 (ENSCCAG00000034312) #9	ARHGEF19 (ENSCCAG00000030184) #10	EPHA2 (ENSCCAG00000006935) #11	FAM131C (ENSCCAG00000029911) #12	ENSCCAG00000022627 #13	HSPB7 (ENSCCAG00000031924) #14	SRARP (ENSCCAG00000025835)	ZBTB17 (ENSCCAG00000035720) #15	SPEN (ENSCCAG00000020258) #16	FBLIM1 (ENSCCAG00000020189) #17	TMEM82 (ENSCCAG00000019233) #18	SLC25A34 (ENSCCAG00000030859) #19	PLEKHM2 (ENSCCAG00000028587) #20	DDI2 (ENSCCAG00000036965)	AGMAT (ENSCCAG00000030030) #22	ENSCCAG00000034120	DNAJC16 (ENSCCAG00000022839) #23	CASP9 (ENSCCAG00000020237) #24	ENSCCAG00000025250 #25	CTRC (ENSCCAG00000037721) #26	EFHD2 (ENSCCAG00000019849) #27	FHAD1 (ENSCCAG00000035375) #28	TMEM51 (ENSCCAG00000033420) #29	ENSCCAG00000037569	ENSCCAG00000025007	KAZN (ENSCCAG00000023463) #31	PRDM2 (ENSCCAG00000025776) #32	PDPN (ENSCCAG00000021068)	LRRC38 (ENSCCAG00000016310) #34	ENSCCAG00000034267
Bolivian squirrel monkey	MODERN SPECIES	110	CPLANE2 (ENSSBOG00000033239) #9	ARHGEF19 (ENSSBOG00000020221) #10	EPHA2 (ENSSBOG00000028925) #11	FAM131C (ENSSBOG00000024741) #12	ENSSBOG00000034174 #13	HSPB7 (ENSSBOG00000025780) #14	SRARP (ENSSBOG00000030246)	ZBTB17 (ENSSBOG00000028990) #15	ENSSBOG00000024996	SPEN (ENSSBOG00000028770) #16	FBLIM1 (ENSSBOG00000019159) #17	TMEM82 (ENSSBOG00000026126) #18	SLC25A34 (ENSSBOG00000029337) #19	PLEKHM2 (ENSSBOG00000033401) #20	RSC1A1 (ENSSBOG00000032268) #21	AGMAT (ENSSBOG00000034495) #22	DNAJC16 (ENSSBOG00000035624) #23	ENSSBOG00000024838	CASP9 (ENSSBOG00000009264) #24	ENSSBOG00000030351 #25	CTRC (ENSSBOG00000025369) #26	EFHD2 (ENSSBOG00000032949) #27	FHAD1 (ENSSBOG00000000586) #28	TMEM51 (ENSSBOG00000033958) #29	KAZN (ENSSBOG00000033671) #31	PRDM2 (ENSSBOG00000018480) #32	ENSSBOG00000028333	LRRC38 (ENSSBOG00000033893) #34
Mas night monkey	MODERN SPECIES	1281	CPLANE2 (ENSANAG00000032645) #9	ARHGEF19 (ENSANAG00000038160) #10	EPHA2 (ENSANAG00000037528) #11	FAM131C (ENSANAG00000026130) #12	ENSANAG00000023434 #13	HSPB7 (ENSANAG00000020521) #14	SRARP (ENSANAG00000030546)	ENSANAG00000018563	ZBTB17 (ENSANAG00000027752) #15	SPEN (ENSANAG00000034428) #16	FBLIM1 (ENSANAG00000032942) #17	TMEM82 (ENSANAG00000026990) #18	SLC25A34 (ENSANAG00000036756) #19	PLEKHM2 (ENSANAG00000037103) #20	RSC1A1 (ENSANAG00000030823) #21	AGMAT (ENSANAG00000026751) #22	DNAJC16 (ENSANAG00000026140) #23	ENSANAG00000036452	CASP9 (ENSANAG00000034956) #24	ENSANAG00000007520 #25	CTRC (ENSANAG00000038501) #26	EFHD2 (ENSANAG00000038054) #27	FHAD1 (ENSANAG00000032478) #28	TMEM51 (ENSANAG00000029829) #29	ENSANAG00000021055 #31	ENSANAG00000027957	ENSANAG00000028761	PRDM2 (ENSANAG00000035735) #32	PDPN (ENSANAG00000031735)	LRRC38 (ENSANAG00000026363) #34
Catarrhini	ANCESTRAL SPECIES	3	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.b #13	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT01030000234528.B.a.a.pb #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00390000009776.j.b	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00950000183107.a.b.a.tb.a	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a.f
Hominoidea	ANCESTRAL SPECIES	3	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.b #13	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003.f #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT01030000234528.B.a.a.pb #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00950000183107.a.b.a.tb.a	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a.f	ENSGT01030000234531.A.b.b.b.b.b.e.a
Hominidae	ANCESTRAL SPECIES	3	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.b #13	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00390000013067.a.a	ENSGT00940000159003.f #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT01030000234528.B.a.a.pb #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00950000183107.a.b.a.tb.a	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a.f	ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00950000183106.b #12	ENSGT00940000158748.b #13	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00390000013067.a.a	ENSGT00390000003860.h.a.a.d	ENSGT00940000159003.e.a #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT01030000234528.B.a.a.pb #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00390000009776.j.b	ENSGT00940000167437.a	ENSGT00940000154570.b #31	ENSGT00390000009710.p.a	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00950000183107.a.b.a.tb.a
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00940000158748.b #13	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00390000013067.a.a	ENSGT00390000003860.h.a.a.d	ENSGT00940000159003.e.a #17	ENSGT00940000159003.f #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT01030000234528.B.a.a.pb #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00390000009776.j.b	ENSGT00940000167437.a	ENSGT00940000154570.b #31	ENSGT00390000009710.p.a	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00950000183107.a.b.a.tb.a
Pan	ANCESTRAL SPECIES		ENSGT00950000183106.b #12	ENSGT00940000158748.b #13	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00390000013067.a.a	ENSGT00390000003860.h.a.a.d	ENSGT00940000159003.f #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT01030000234528.B.a.a.pb #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00390000009776.j.b	ENSGT00940000167437.a	ENSGT00940000154570.b #31	ENSGT00390000009710.p.a	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00950000183107.a.b.a.tb.a
Bonobo	MODERN SPECIES		ENSPPAG00000038070 #12	CLCNKB (ENSPPAG00000031706) #13	CLCNKA (ENSPPAG00000043677) #13	ENSPPAG00000032140 #14	SRARP (ENSPPAG00000029320)	ZBTB17 (ENSPPAG00000035070) #15	SPEN (ENSPPAG00000035690) #16	ENSPPAG00000042734	UQCRHL (ENSPPAG00000014445)	ENSPPAG00000032204 #17	TMEM82 (ENSPPAG00000001216) #18	SLC25A34 (ENSPPAG00000042365) #19	PLEKHM2 (ENSPPAG00000036158) #20	RSC1A1 (ENSPPAG00000024018) #21	DDI2 (ENSPPAG00000038331)	AGMAT (ENSPPAG00000027720) #22	DNAJC16 (ENSPPAG00000038752) #23	CASP9 (ENSPPAG00000043312) #24	CELA2B (ENSPPAG00000041434) #25	CELA2A (ENSPPAG00000030039) #25	CTRC (ENSPPAG00000033889) #26	EFHD2 (ENSPPAG00000029402) #27	FHAD1 (ENSPPAG00000013425) #28	TMEM51 (ENSPPAG00000027626) #29	ENSPPAG00000009276	ENSPPAG00000030734	KAZN (ENSPPAG00000007694) #31	PRDM2 (ENSPPAG00000036677) #32	ENSPPAG00000039265	ENSPPAG00000030116	LRRC38 (ENSPPAG00000027892) #34
Chimpanzee	MODERN SPECIES		EPHA2 (ENSPTRG00000000221) #11	CLCNKB (ENSPTRG00000000217) #13	FAM131C (ENSPTRG00000047706) #12	CLCNKA (ENSPTRG00000034081) #13	HSPB7 (ENSPTRG00000000214) #14	SRARP (ENSPTRG00000040888)	ZBTB17 (ENSPTRG00000000211) #15	SPEN (ENSPTRG00000000210) #16	ENSPTRG00000048713	UQCRHL (ENSPTRG00000041786)	FBLIM1 (ENSPTRG00000000208) #17	TMEM82 (ENSPTRG00000000207) #18	SLC25A34 (ENSPTRG00000000206) #19	PLEKHM2 (ENSPTRG00000000205) #20	DDI2 (ENSPTRG00000024059)	AGMAT (ENSPTRG00000000202) #22	DNAJC16 (ENSPTRG00000000201) #23	CASP9 (ENSPTRG00000000200) #24	CELA2B (ENSPTRG00000049760) #25	CELA2A (ENSPTRG00000034262) #25	CTRC (ENSPTRG00000000197) #26	EFHD2 (ENSPTRG00000050778) #27	FHAD1 (ENSPTRG00000000194) #28	TMEM51 (ENSPTRG00000000193) #29	ENSPTRG00000048250	ENSPTRG00000030816	ENSPTRG00000049061	KAZN (ENSPTRG00000000186) #31	PRDM2 (ENSPTRG00000000185) #32	PDPN (ENSPTRG00000000184)	ENSPTRG00000042868
Human	MODERN SPECIES		EPHA2 (ENSG00000142627) #11	FAM131C (ENSG00000185519) #12	CLCNKB (ENSG00000184908) #13	CLCNKA (ENSG00000186510) #13	HSPB7 (ENSG00000173641) #14	SRARP (ENSG00000183888)	ZBTB17 (ENSG00000116809) #15	SPEN (ENSG00000065526) #16	UQCRHL (ENSG00000233954)	FBLIM1 (ENSG00000162458) #17	TMEM82 (ENSG00000162460) #18	SLC25A34 (ENSG00000162461) #19	PLEKHM2 (ENSG00000116786) #20	RSC1A1 (ENSG00000215695) #21	DDI2 (ENSG00000197312)	AGMAT (ENSG00000116771) #22	DNAJC16 (ENSG00000116138) #23	CASP9 (ENSG00000132906) #24	CELA2B (ENSG00000215704) #25	CELA2A (ENSG00000142615) #25	CTRC (ENSG00000162438) #26	EFHD2 (ENSG00000142634) #27	FHAD1 (ENSG00000142621) #28	TMEM51 (ENSG00000171729) #29	KAZN (ENSG00000189337) #31	PRDM2 (ENSG00000116731) #32	PDPN (ENSG00000162493)	LRRC38 (ENSG00000162494) #34	PRAMEF20 (ENSG00000204478)	PRAMEF17 (ENSG00000204479)	PRAMEF19 (ENSG00000204480)
Gorilla	MODERN SPECIES		EPHA2 (ENSGGOG00000007964) #11	FAM131C (ENSGGOG00000022887) #12	CLCNKA (ENSGGOG00000007939) #13	ENSGGOG00000007936 #14	SRARP (ENSGGOG00000007932)	ENSGGOG00000038557	ZBTB17 (ENSGGOG00000012058) #15	SPEN (ENSGGOG00000012041) #16	UQCRHL (ENSGGOG00000022771)	FBLIM1 (ENSGGOG00000015190) #17	TMEM82 (ENSGGOG00000015186) #18	SLC25A34 (ENSGGOG00000015182) #19	PLEKHM2 (ENSGGOG00000015173) #20	DDI2 (ENSGGOG00000013537)	ENSGGOG00000028428	AGMAT (ENSGGOG00000015172) #22	DNAJC16 (ENSGGOG00000002611) #23	CASP9 (ENSGGOG00000001961) #24	CELA2B (ENSGGOG00000036765) #25	CELA2A (ENSGGOG00000013964) #25	CTRC (ENSGGOG00000006673) #26	EFHD2 (ENSGGOG00000006667) #27	FHAD1 (ENSGGOG00000000691) #28	TMEM51 (ENSGGOG00000028096) #29	ENSGGOG00000007474	ENSGGOG00000038135	KAZN (ENSGGOG00000013613) #31	PRDM2 (ENSGGOG00000005678) #32	ENSGGOG00000010242	ENSGGOG00000006226	LRRC38 (ENSGGOG00000003598) #34
Orangutan	MODERN SPECIES		EPHA2 (ENSPPYG00000001827) #11	FAM131C (ENSPPYG00000001828) #12	CLCNKB (ENSPPYG00000001829) #13	CLCNKA (ENSPPYG00000001830) #13	ENSPPYG00000041644 #14	SRARP (ENSPPYG00000001832)	ZBTB17 (ENSPPYG00000001833) #15	SPEN (ENSPPYG00000001834) #16	ENSPPYG00000041104	FBLIM1 (ENSPPYG00000001837) #17	TMEM82 (ENSPPYG00000001838) #18	SLC25A34 (ENSPPYG00000037176) #19	PLEKHM2 (ENSPPYG00000001840) #20	RSC1A1 (ENSPPYG00000031265) #21	DDI2 (ENSPPYG00000001841)	AGMAT (ENSPPYG00000001842) #22	DNAJC16 (ENSPPYG00000001843) #23	CASP9 (ENSPPYG00000001844) #24	CELA2B (ENSPPYG00000001845) #25	ENSPPYG00000010674 #25	CELA2A (ENSPPYG00000034416) #25	CTRC (ENSPPYG00000001846) #26	EFHD2 (ENSPPYG00000036146) #27	FHAD1 (ENSPPYG00000001848) #28	ENSPPYG00000001850 #29	KAZN (ENSPPYG00000001854) #31	PRDM2 (ENSPPYG00000001855) #32	ENSPPYG00000001856	ENSPPYG00000001857	LRRC38 (ENSPPYG00000010676) #34	ENSPPYG00000030098
Gibbon	MODERN SPECIES	16	EPHA2 (ENSNLEG00000007722) #11	ENSNLEG00000007718 #12	CLCNKB (ENSNLEG00000029026) #13	ENSNLEG00000033167 #12	CLCNKA (ENSNLEG00000007673) #13	ENSNLEG00000007671 #14	SRARP (ENSNLEG00000007670)	ZBTB17 (ENSNLEG00000007658) #15	SPEN (ENSNLEG00000007652) #16	ENSNLEG00000018560	FBLIM1 (ENSNLEG00000007650) #17	TMEM82 (ENSNLEG00000007645) #18	SLC25A34 (ENSNLEG00000007644) #19	PLEKHM2 (ENSNLEG00000007636) #20	DDI2 (ENSNLEG00000018559)	AGMAT (ENSNLEG00000007628) #22	DNAJC16 (ENSNLEG00000007619) #23	CASP9 (ENSNLEG00000007614) #24	CELA2B (ENSNLEG00000007611) #25	CELA2A (ENSNLEG00000026921) #25	CTRC (ENSNLEG00000007606) #26	EFHD2 (ENSNLEG00000007602) #27	FHAD1 (ENSNLEG00000007592) #28	TMEM51 (ENSNLEG00000007586) #29	ENSNLEG00000032060	ENSNLEG00000009890	KAZN (ENSNLEG00000007579) #31	PRDM2 (ENSNLEG00000009887) #32	ENSNLEG00000036224	ENSNLEG00000032775	LRRC38 (ENSNLEG00000009883) #34
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.b #13	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT01030000234528.B.a.a.pb.c #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00390000009776.j.b	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00950000183107.a.b.a.tb.a	ENSGT00940000162571 #34	ENSGT00940000163979
Cercopithecinae	ANCESTRAL SPECIES		ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.b #13	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT01030000234528.B.a.a.pb.c #25	ENSGT00940000153216.a.b.c #26	ENSGT01030000234528.B.a.a.pb.d.b.b #25	ENSGT00940000153216.a.b.d #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00390000009776.j.b	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.b #13	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT01030000234528.B.a.a.pb.c #25	ENSGT00940000153216.a.b.c #26	ENSGT01030000234528.B.a.a.pb.d.b.b #25	ENSGT00940000153216.a.b.d #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00390000009776.j.b	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34
Macaca	ANCESTRAL SPECIES		ENSGT00440000039706 #8	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.b #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT01030000234528.B.a.a.pb.c #25	ENSGT00940000153216.a.b.c #26	ENSGT01030000234528.B.a.a.pb.d.b.b #25	ENSGT00940000153216.a.b.d #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00390000009776.j.b	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34
Macaca_a	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.b #13	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT01030000234528.B.a.a.pb.c #25	ENSGT00940000153216.a.b.c #26	ENSGT00390000012058.c.b #27	ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.b.a	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.b.a.b.a.b	ENSGT01100000263493.a.b.b.a.a.a.a.a.b	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013
Crab-eating macaque	MODERN SPECIES		EPHA2 (ENSMFAG00000045141) #11	FAM131C (ENSMFAG00000003119) #12	CLCNKA (ENSMFAG00000033135) #13	HSPB7 (ENSMFAG00000008280) #14	SRARP (ENSMFAG00000045613)	ZBTB17 (ENSMFAG00000037882) #15	SPEN (ENSMFAG00000041974) #16	ENSMFAG00000051633	ENSMFAG00000044321	FBLIM1 (ENSMFAG00000044716) #17	TMEM82 (ENSMFAG00000044352) #18	ENSMFAG00000055220	SLC25A34 (ENSMFAG00000060774) #19	PLEKHM2 (ENSMFAG00000044082) #20	RSC1A1 (ENSMFAG00000040011) #21	AGMAT (ENSMFAG00000055350) #22	DNAJC16 (ENSMFAG00000036417) #23	CASP9 (ENSMFAG00000044632) #24	CELA2B (ENSMFAG00000034080) #25	ENSMFAG00000058946	ENSMFAG00000044896 #27	ENSMFAG00000030840 #28	TMEM51 (ENSMFAG00000031613) #29	ENSMFAG00000050473 #31	ENSMFAG00000033310 #31	ENSMFAG00000060810	ENSMFAG00000053475	ENSMFAG00000061860	ENSMFAG00000060287	ENSMFAG00000037989 #32	PDPN (ENSMFAG00000001482)
Rhesus	MODERN SPECIES		CPLANE2 (ENSMMUG00000065250) #9	ARHGEF19 (ENSMMUG00000014410) #10	EPHA2 (ENSMMUG00000018245) #11	FAM131C (ENSMMUG00000058587) #12	CLCNKB (ENSMMUG00000018235) #13	HSPB7 (ENSMMUG00000001910) #14	SRARP (ENSMMUG00000001911)	ZBTB17 (ENSMMUG00000008031) #15	SPEN (ENSMMUG00000008026) #16	FBLIM1 (ENSMMUG00000032243) #17	TMEM82 (ENSMMUG00000045777) #18	ENSMMUG00000055524	SLC25A34 (ENSMMUG00000060152) #19	PLEKHM2 (ENSMMUG00000016281) #20	RSC1A1 (ENSMMUG00000019912) #21	AGMAT (ENSMMUG00000002802) #22	DNAJC16 (ENSMMUG00000032244) #23	CASP9 (ENSMMUG00000018163) #24	CELA2B (ENSMMUG00000031821) #25	ENSMMUG00000064552 #25	ENSMMUG00000053550 #25	ENSMMUG00000060541 #26	ENSMMUG00000058742	EFHD2 (ENSMMUG00000050246) #27	ENSMMUG00000053235	FHAD1 (ENSMMUG00000003987) #28	TMEM51 (ENSMMUG00000006164) #29	KAZN (ENSMMUG00000023070) #31	ENSMMUG00000059157	ENSMMUG00000059275	ENSMMUG00000050642
Pig-tailed macaque	MODERN SPECIES	508	FBXO42 (ENSMNEG00000028416) #8	CPLANE2 (ENSMNEG00000029636) #9	ARHGEF19 (ENSMNEG00000039913) #10	EPHA2 (ENSMNEG00000043341) #11	FAM131C (ENSMNEG00000037181) #12	CLCNKB (ENSMNEG00000030409) #13	HSPB7 (ENSMNEG00000030966) #14	SRARP (ENSMNEG00000041116)	ZBTB17 (ENSMNEG00000037648) #15	SPEN (ENSMNEG00000042402) #16	FBLIM1 (ENSMNEG00000041350) #17	TMEM82 (ENSMNEG00000044140) #18	SLC25A34 (ENSMNEG00000029592) #19	PLEKHM2 (ENSMNEG00000027232) #20	RSC1A1 (ENSMNEG00000027911) #21	AGMAT (ENSMNEG00000038882) #22	DNAJC16 (ENSMNEG00000015068) #23	CASP9 (ENSMNEG00000032453) #24	CELA2B (ENSMNEG00000035015) #25	ENSMNEG00000034527 #25	ENSMNEG00000033814 #25	CTRC (ENSMNEG00000029283) #26	EFHD2 (ENSMNEG00000029503) #27	FHAD1 (ENSMNEG00000045473) #28	TMEM51 (ENSMNEG00000030790) #29	ENSMNEG00000027989	KAZN (ENSMNEG00000038651) #31	PRDM2 (ENSMNEG00000039705) #32	PDPN (ENSMNEG00000043777)	LRRC38 (ENSMNEG00000043446) #34	PRAMEF20 (ENSMNEG00000043597)
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.b #13	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT00940000153216.a.b.d #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.a.f	ENSGT01030000234531.A.b.b.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.b.b.f.a	ENSGT01030000234531.A.b.b.b.a.e.c
Cercopithecinae_d	ANCESTRAL SPECIES	168	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748.b #13	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25
Sooty mangabey	MODERN SPECIES	300	CPLANE2 (ENSCATG00000041767) #9	ARHGEF19 (ENSCATG00000037711) #10	EPHA2 (ENSCATG00000030471) #11	ENSCATG00000019848 #12	ENSCATG00000035540 #12	CLCNKB (ENSCATG00000015545) #13	HSPB7 (ENSCATG00000018549) #14	SRARP (ENSCATG00000034090)	ZBTB17 (ENSCATG00000033423) #15	SPEN (ENSCATG00000015079) #16	FBLIM1 (ENSCATG00000000020) #17	TMEM82 (ENSCATG00000040539) #18	SLC25A34 (ENSCATG00000035130) #19	PLEKHM2 (ENSCATG00000034366) #20	RSC1A1 (ENSCATG00000029409) #21	AGMAT (ENSCATG00000036364) #22	DNAJC16 (ENSCATG00000036331) #23	CASP9 (ENSCATG00000018118) #24	ENSCATG00000030356 #25
Drill	MODERN SPECIES	1122	CPLANE2 (ENSMLEG00000033389) #9	ARHGEF19 (ENSMLEG00000041627) #10	EPHA2 (ENSMLEG00000032820) #11	FAM131C (ENSMLEG00000039459) #12	CLCNKB (ENSMLEG00000001661) #13	CLCNKA (ENSMLEG00000040447) #13	HSPB7 (ENSMLEG00000033431) #14	SRARP (ENSMLEG00000036731)	ZBTB17 (ENSMLEG00000001928) #15	SPEN (ENSMLEG00000039293) #16	FBLIM1 (ENSMLEG00000036228) #17	TMEM82 (ENSMLEG00000036040) #18	SLC25A34 (ENSMLEG00000033955) #19	PLEKHM2 (ENSMLEG00000028825) #20	DDI2 (ENSMLEG00000030209)	AGMAT (ENSMLEG00000029575) #22	DNAJC16 (ENSMLEG00000030153) #23	CASP9 (ENSMLEG00000042064) #24	CELA2B (ENSMLEG00000010401) #25
Olive baboon	MODERN SPECIES		FBXO42 (ENSPANG00000011833) #8	CPLANE2 (ENSPANG00000008257) #9	EPHA2 (ENSPANG00000018686) #11	FAM131C (ENSPANG00000035757) #12	CLCNKA (ENSPANG00000014644) #13	HSPB7 (ENSPANG00000021221) #14	SRARP (ENSPANG00000049055)	ZBTB17 (ENSPANG00000015972) #15	SPEN (ENSPANG00000006293) #16	FBLIM1 (ENSPANG00000019414) #17	TMEM82 (ENSPANG00000018591) #18	SLC25A34 (ENSPANG00000020306) #19	PLEKHM2 (ENSPANG00000012689) #20	RSC1A1 (ENSPANG00000041977) #21	DDI2 (ENSPANG00000015838)	AGMAT (ENSPANG00000019715) #22	DNAJC16 (ENSPANG00000015571) #23	CASP9 (ENSPANG00000001073) #24	CELA2B (ENSPANG00000015026) #25	EFHD2 (ENSPANG00000021488) #27	ENSPANG00000019569 #28	ENSPANG00000045260 #29	ENSPANG00000040374	KAZN (ENSPANG00000005382) #31	PRDM2 (ENSPANG00000007508) #32	PDPN (ENSPANG00000009068)	LRRC38 (ENSPANG00000050121) #34	ENSPANG00000013765	ENSPANG00000008813	ENSPANG00000019717	ENSPANG00000032026
Vervet Monkey	MODERN SPECIES	12	ARHGEF19 (ENSCSAG00000000850) #10	ENSCSAG00000000849	EPHA2 (ENSCSAG00000000848) #11	FAM131C (ENSCSAG00000000847) #12	CLCNKB (ENSCSAG00000000846) #13	CLCNKA (ENSCSAG00000000845) #13	HSPB7 (ENSCSAG00000000844) #14	SRARP (ENSCSAG00000000843)	ENSCSAG00000000842 #15	SPEN (ENSCSAG00000000841) #16	FBLIM1 (ENSCSAG00000000840) #17	TMEM82 (ENSCSAG00000000839) #18	SLC25A34 (ENSCSAG00000000838) #19	PLEKHM2 (ENSCSAG00000000837) #20	RSC1A1 (ENSCSAG00000000836) #21	AGMAT (ENSCSAG00000000835) #22	DNAJC16 (ENSCSAG00000000834) #23	CASP9 (ENSCSAG00000000833) #24	CELA2B (ENSCSAG00000000832) #25	CTRC (ENSCSAG00000000831) #26	EFHD2 (ENSCSAG00000000830) #27	FHAD1 (ENSCSAG00000000829) #28	ENSCSAG00000000828 #28	TMEM51 (ENSCSAG00000000827) #29	KAZN (ENSCSAG00000000825) #31	PRDM2 (ENSCSAG00000000824) #32	PDPN (ENSCSAG00000000823)	LRRC38 (ENSCSAG00000000822) #34	PRAMEF20 (ENSCSAG00000000821)	ENSCSAG00000000820	ENSCSAG00000000819
Rhinopithecus	ANCESTRAL SPECIES	213	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b.c #12	ENSGT00940000158748.b #13	ENSGT00950000183106.b.d #12	ENSGT00940000158748.a #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.qb #25	ENSGT01030000234528.B.a.a.pb.d.b.b #25
Black snub-nosed monkey	MODERN SPECIES	2676	EPHA2 (ENSRBIG00000033231) #11	ENSRBIG00000029553 #12	CLCNKB (ENSRBIG00000036735) #13	ENSRBIG00000037053 #12	CLCNKA (ENSRBIG00000032787) #13	HSPB7 (ENSRBIG00000030637) #14	SRARP (ENSRBIG00000031032)	ZBTB17 (ENSRBIG00000031303) #15	ENSRBIG00000041098	SPEN (ENSRBIG00000039654) #16	FBLIM1 (ENSRBIG00000036960) #17	TMEM82 (ENSRBIG00000041799) #18	SLC25A34 (ENSRBIG00000042919) #19	PLEKHM2 (ENSRBIG00000039082) #20	RSC1A1 (ENSRBIG00000031118) #21	AGMAT (ENSRBIG00000029662) #22	DNAJC16 (ENSRBIG00000044102) #23	CASP9 (ENSRBIG00000030398) #24	CELA2B (ENSRBIG00000032017) #25	CELA2A (ENSRBIG00000028562) #25
Golden snub-nosed monkey	MODERN SPECIES	2375												TMEM82 (ENSRROG00000030864) #18	SLC25A34 (ENSRROG00000029182) #19	PLEKHM2 (ENSRROG00000040448) #20	RSC1A1 (ENSRROG00000042834) #21	AGMAT (ENSRROG00000032926) #22	DNAJC16 (ENSRROG00000021561) #23	CASP9 (ENSRROG00000041647) #24	CELA2B (ENSRROG00000029503) #25	ENSRROG00000029217 #25
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b
Artiodactyla	ANCESTRAL SPECIES		ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.b
Suina	ANCESTRAL SPECIES	10	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.c.a.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.c.a.b	ENSGT01030000234531.A.b.b.b.i.a.b.a	ENSGT01030000234531.A.b.b.b.i.a.a.b.c.b
Pig	MODERN SPECIES	14	FBXO42 (ENSSSCG00000024794) #8	CPLANE2 (ENSSSCG00000003473) #9	ARHGEF19 (ENSSSCG00000003472) #10	EPHA2 (ENSSSCG00000003471) #11	FAM131C (ENSSSCG00000003470) #12	ENSSSCG00000026345 #13	HSPB7 (ENSSSCG00000041935) #14	SRARP (ENSSSCG00000036026)	ENSSSCG00000059667	ZBTB17 (ENSSSCG00000026103) #15	FBLIM1 (ENSSSCG00000003465) #17	TMEM82 (ENSSSCG00000003466) #18	SLC25A34 (ENSSSCG00000032950) #19	PLEKHM2 (ENSSSCG00000003468) #20	RSC1A1 (ENSSSCG00000003461) #21	AGMAT (ENSSSCG00000003463) #22	DNAJC16 (ENSSSCG00000003464) #23	CASP9 (ENSSSCG00000003460) #24	CELA2A (ENSSSCG00000003459) #25	CTRC (ENSSSCG00000054068) #26	EFHD2 (ENSSSCG00000003458) #27	FHAD1 (ENSSSCG00000003455) #28	TMEM51 (ENSSSCG00000021026) #29	KAZN (ENSSSCG00000037676) #31	ENSSSCG00000043303	ENSSSCG00000054874	PRDM2 (ENSSSCG00000020710) #32	PDPN (ENSSSCG00000003451)	ENSSSCG00000003448	LRRC38 (ENSSSCG00000003449) #34	ENSSSCG00000037632
Chacoan peccary	MODERN SPECIES	808	FBXO42 (ENSCWAG00000004000) #8	CPLANE2 (ENSCWAG00000003981) #9	EPHA2 (ENSCWAG00000003848) #11	FAM131C (ENSCWAG00000012534) #12	ENSCWAG00000011962 #13	HSPB7 (ENSCWAG00000011870) #14	SRARP (ENSCWAG00000011851)	ZBTB17 (ENSCWAG00000011639) #15	SPEN (ENSCWAG00000011530) #16	FBLIM1 (ENSCWAG00000011464) #17	TMEM82 (ENSCWAG00000011399) #18	SLC25A34 (ENSCWAG00000011336) #19	PLEKHM2 (ENSCWAG00000011249) #20	RSC1A1 (ENSCWAG00000011233) #21	DDI2 (ENSCWAG00000011183)	AGMAT (ENSCWAG00000011107) #22	DNAJC16 (ENSCWAG00000010911) #23	CASP9 (ENSCWAG00000010871) #24	ENSCWAG00000010788 #25	CTRC (ENSCWAG00000010723) #26	EFHD2 (ENSCWAG00000010688) #27	FHAD1 (ENSCWAG00000010624) #28	TMEM51 (ENSCWAG00000010594) #29	KAZN (ENSCWAG00000010184) #31	ENSCWAG00000010143	PRDM2 (ENSCWAG00000009695) #32	PDPN (ENSCWAG00000009625)	LRRC38 (ENSCWAG00000009598) #34	ENSCWAG00000009563	ENSCWAG00000008260	ENSCWAG00000007976
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.b
Camelidae	ANCESTRAL SPECIES	3	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000163979	ENSGT01030000234531.A.b.b.b.i.b.a	ENSGT01030000234531.A.b.b.b.i.b.b	ENSGT00390000014553
Alpaca	MODERN SPECIES	428														RSC1A1 (ENSVPAG00000011670) #21	DDI2 (ENSVPAG00000011669)	AGMAT (ENSVPAG00000011667) #22	DNAJC16 (ENSVPAG00000011665) #23	CASP9 (ENSVPAG00000011663) #24
Arabian camel	MODERN SPECIES	4	FBXO42 (ENSCDRG00005004101) #8	CPLANE2 (ENSCDRG00005004066) #9	ARHGEF19 (ENSCDRG00005004010) #10	EPHA2 (ENSCDRG00005003965) #11	FAM131C (ENSCDRG00005003926) #12	ENSCDRG00005003783 #13	HSPB7 (ENSCDRG00005003734) #14	SRARP (ENSCDRG00005003713)	ZBTB17 (ENSCDRG00005003563) #15	SPEN (ENSCDRG00005003423) #16	FBLIM1 (ENSCDRG00005003370) #17	TMEM82 (ENSCDRG00005020345) #18	SLC25A34 (ENSCDRG00005020338) #19	PLEKHM2 (ENSCDRG00005019947) #20	ENSCDRG00005019881 #21	AGMAT (ENSCDRG00005019855) #22	DNAJC16 (ENSCDRG00005019829) #23	CASP9 (ENSCDRG00005019814) #24	ENSCDRG00005019791 #25	CTRC (ENSCDRG00005019769) #26	EFHD2 (ENSCDRG00005019753) #27	FHAD1 (ENSCDRG00005019578) #28	TMEM51 (ENSCDRG00005019540) #29	ENSCDRG00005019377 #31	ENSCDRG00005019343	PRDM2 (ENSCDRG00005019238) #32	PDPN (ENSCDRG00005019191)	ENSCDRG00005019181	ENSCDRG00005018920	ENSCDRG00005018739	CFAP107 (ENSCDRG00005018678)
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a
Cetacea	ANCESTRAL SPECIES		ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.a
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a
Dolphin	MODERN SPECIES	739															DDI2 (ENSTTRG00000015774)	AGMAT (ENSTTRG00000015772) #22	DNAJC16 (ENSTTRG00000015769) #23	CASP9 (ENSTTRG00000015767) #24	ENSTTRG00000015761 #25	CTRC (ENSTTRG00000015758) #26	EFHD2 (ENSTTRG00000015754) #27	ENSTTRG00000015734 #28
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a	ENSGT01030000234531.A.b.b.b.i.a.a.a.a
Vaquita	MODERN SPECIES		CPLANE2 (ENSPSNG00000000176) #9	ARHGEF19 (ENSPSNG00000000151) #10	EPHA2 (ENSPSNG00000000128) #11	FAM131C (ENSPSNG00000000104) #12	ENSPSNG00000000075 #13	HSPB7 (ENSPSNG00000000038) #14	SRARP (ENSPSNG00000000030)	ZBTB17 (ENSPSNG00000000023) #15	SPEN (ENSPSNG00000000019) #16	FBLIM1 (ENSPSNG00000000011) #17	TMEM82 (ENSPSNG00000000008) #18	SLC25A34 (ENSPSNG00000000006) #19	PLEKHM2 (ENSPSNG00000000003) #20	RSC1A1 (ENSPSNG00000016538) #21	DDI2 (ENSPSNG00000016493)	AGMAT (ENSPSNG00000016383) #22	DNAJC16 (ENSPSNG00000016286) #23	CASP9 (ENSPSNG00000016214) #24	ENSPSNG00000015787 #25	CTRC (ENSPSNG00000015637) #26	EFHD2 (ENSPSNG00000015611) #27	ENSPSNG00000015562	FHAD1 (ENSPSNG00000015379) #28	TMEM51 (ENSPSNG00000015327) #29	ENSPSNG00000015276	KAZN (ENSPSNG00000014520) #31	ENSPSNG00000014427	ENSPSNG00000014314 #32	PDPN (ENSPSNG00000014169)	LRRC38 (ENSPSNG00000014112) #34	ENSPSNG00000013599
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.c.a	ENSGT01030000234531.A.b.b.b.i.a.a.a.a
Beluga whale	MODERN SPECIES	51	SZRD1 (ENSDLEG00000013494) #7	FBXO42 (ENSDLEG00000013529) #8	RSG1 (ENSDLEG00000013544) #9	ARHGEF19 (ENSDLEG00000013558) #10	EPHA2 (ENSDLEG00000013587) #11	ENSDLEG00000013775 #13	HSPB7 (ENSDLEG00000013886) #14	SRARP (ENSDLEG00000013896)	ZBTB17 (ENSDLEG00000013910) #15	SPEN (ENSDLEG00000013956) #16	FBLIM1 (ENSDLEG00000013991) #17	TMEM82 (ENSDLEG00000014032) #18	SLC25A34 (ENSDLEG00000014059) #19	PLEKHM2 (ENSDLEG00000014078) #20	ENSDLEG00000014150 #21	AGMAT (ENSDLEG00000014173) #22	DNAJC16 (ENSDLEG00000014190) #23	CASP9 (ENSDLEG00000014226) #24	ENSDLEG00000014265 #25	CTRC (ENSDLEG00000014286) #26	EFHD2 (ENSDLEG00000014322) #27	FHAD1 (ENSDLEG00000014350) #28	TMEM51 (ENSDLEG00000014403) #29	KAZN (ENSDLEG00000014420) #31	ENSDLEG00000014459 ##31	PRDM2 (ENSDLEG00000014477) #32	PDPN (ENSDLEG00000014539)	LRRC38 (ENSDLEG00000014556) #34	ENSDLEG00000014598	ENSDLEG00000014811	ENSDLEG00000015097
Narwhal	MODERN SPECIES	304	ENSMMNG00015009217	ARHGEF19 (ENSMMNG00015009234) #10	EPHA2 (ENSMMNG00015009252) #11	FAM131C (ENSMMNG00015009271) #12	ENSMMNG00015009289 #13	HSPB7 (ENSMMNG00015009306) #14	SRARP (ENSMMNG00015009314)	ZBTB17 (ENSMMNG00015009323) #15	SPEN (ENSMMNG00015009352) #16	FBLIM1 (ENSMMNG00015009423) #17	TMEM82 (ENSMMNG00015009449) #18	SLC25A34 (ENSMMNG00015009466) #19	PLEKHM2 (ENSMMNG00015009498) #20	RSC1A1 (ENSMMNG00015009553) #21	DDI2 (ENSMMNG00015009565)	AGMAT (ENSMMNG00015005248) #22	DNAJC16 (ENSMMNG00015005297) #23	CASP9 (ENSMMNG00015005353) #24	ENSMMNG00015005395 #25	CTRC (ENSMMNG00015005454) #26	EFHD2 (ENSMMNG00015005471) #27	FHAD1 (ENSMMNG00015005493) #28	TMEM51 (ENSMMNG00015005532) #29	KAZN (ENSMMNG00015005583) #31	ENSMMNG00015005668	PRDM2 (ENSMMNG00015005720) #32	ENSMMNG00015005757	PDPN (ENSMMNG00015005780)	LRRC38 (ENSMMNG00015005800) #34	ENSMMNG00015005863	ENSMMNG00015005928
Sperm whale	MODERN SPECIES	14	C3H1orf158 (ENSPCTG00005001604)	ENSPCTG00005001584	ENSPCTG00005001551	ENSPCTG00005001259	ENSPCTG00005001104	ENSPCTG00005001063	LRRC38 (ENSPCTG00005001054) #34	ENSPCTG00005001028	PRDM2 (ENSPCTG00005001008) #32	ENSPCTG00005000978	ENSPCTG00005000969	ENSPCTG00005000958 ##31	ENSPCTG00005000951	TMEM51 (ENSPCTG00005000941) #29	ENSPCTG00005000906 #21	AGMAT (ENSPCTG00005000873) #22	DNAJC16 (ENSPCTG00005000857) #23	SPEN (ENSPCTG00005000775) #16	ZBTB17 (ENSPCTG00005000714) #15	ENSPCTG00005000688	ENSPCTG00005000678 #8	ENSPCTG00005000666 #7	SPATA21 (ENSPCTG00005000642)	ENSPCTG00005000618	NECAP2 (ENSPCTG00005000560)	CROCC (ENSPCTG00005000477)	MFAP2 (ENSPCTG00005000433)	ATP13A2 (ENSPCTG00005000401)	SDHB (ENSPCTG00005000351)	PADI3 (ENSPCTG00005000306)	PADI4 (ENSPCTG00005000279)
Blue whale	MODERN SPECIES		FBXO42 (ENSBMSG00010000326) #8	CPLANE2 (ENSBMSG00010000300) #9	ARHGEF19 (ENSBMSG00010000217) #10	EPHA2 (ENSBMSG00010000136) #11	FAM131C (ENSBMSG00010000090) #12	ENSBMSG00010000048 #13	HSPB7 (ENSBMSG00010000026) #14	SRARP (ENSBMSG00010000016)	ZBTB17 (ENSBMSG00010000009) #15	SPEN (ENSBMSG00010000004) #16	FBLIM1 (ENSBMSG00010008564) #17	TMEM82 (ENSBMSG00010008539) #18	SLC25A34 (ENSBMSG00010008526) #19	PLEKHM2 (ENSBMSG00010008480) #20	ENSBMSG00010008433 #21	AGMAT (ENSBMSG00010008410) #22	DNAJC16 (ENSBMSG00010008382) #23	CASP9 (ENSBMSG00010008360) #24	ENSBMSG00010008297 #25	CTRC (ENSBMSG00010008262) #26	EFHD2 (ENSBMSG00010008253) #27	ENSBMSG00010008241	FHAD1 (ENSBMSG00010008207) #28	TMEM51 (ENSBMSG00010008196) #29	ENSBMSG00010008193	ENSBMSG00010008186	KAZN (ENSBMSG00010008100) #31	PRDM2 (ENSBMSG00010008032) #32	PDPN (ENSBMSG00010007995)	LRRC38 (ENSBMSG00010007987) #34	ENSBMSG00010007958
Pecora	ANCESTRAL SPECIES	22	ENSGT00940000162007	ENSGT00940000163056	ENSGT00390000017652	ENSGT00390000003618	ENSGT00940000157635	ENSGT00390000010057	ENSGT00940000160830	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a	ENSGT01030000234531.A.b.b.b.i.a.b.d
Yarkand deer	MODERN SPECIES	5	ENSCHYG00000019511	AGRN (ENSCHYG00000019668)	ENSCHYG00000020695	HES4 (ENSCHYG00000020760)	ENSCHYG00000020901	KLHL17 (ENSCHYG00000020979)	NOC2L (ENSCHYG00000021501)	SAMD11 (ENSCHYG00000021909)	ZBTB17 (ENSCHYG00000022216) #15	SPEN (ENSCHYG00000022636) #16	FBLIM1 (ENSCHYG00000022827) #17	TMEM82 (ENSCHYG00000022909) #18	ENSCHYG00000022975 #19	PLEKHM2 (ENSCHYG00000023065) #20	ENSCHYG00000023341 #21	AGMAT (ENSCHYG00000023518) #22	DNAJC16 (ENSCHYG00000023597) #23	CASP9 (ENSCHYG00000023723) #24	ENSCHYG00000023761 #25	ENSCHYG00000023937 #25	FHAD1 (ENSCHYG00000024072) #28	TMEM51 (ENSCHYG00000024288) #29	KAZN (ENSCHYG00000024327) #31	PRDM2 (ENSCHYG00000024667) #32	PDPN (ENSCHYG00000024833)	LRRC38 (ENSCHYG00000024848) #34	ENSCHYG00000024866	ENSCHYG00000024944	ENSCHYG00000025053	ENSCHYG00000025290	ENSCHYG00000025443
Percora_a	ANCESTRAL SPECIES	15	ENSGT00940000162007	ENSGT00940000163056	ENSGT00390000017652	ENSGT00390000003618	ENSGT00940000157635	ENSGT00390000010057	ENSGT00940000160830	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a
Bovidae	ANCESTRAL SPECIES	15	ENSGT00940000162007	ENSGT00940000163056	ENSGT00390000017652	ENSGT00390000003618	ENSGT00940000157635	ENSGT00390000010057	ENSGT00940000160830	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a
Caprinae	ANCESTRAL SPECIES	12	ENSGT00940000162007	ENSGT00940000163056	ENSGT00390000017652	ENSGT00390000003618	ENSGT00940000157635	ENSGT00390000010057	ENSGT00940000160830	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a
Rambouillet Sheep	MODERN SPECIES	3	ENSOARG00020012108	AGRN (ENSOARG00020012422)	ISG15 (ENSOARG00020014334)	HES4 (ENSOARG00020014382)	ENSOARG00020014411	PLEKHN1 (ENSOARG00020014466)	KLHL17 (ENSOARG00020014887)	NOC2L (ENSOARG00020015022)	SAMD11 (ENSOARG00020015279)	ZBTB17 (ENSOARG00020015851) #15	SPEN (ENSOARG00020016226) #16	FBLIM1 (ENSOARG00020016382) #17	TMEM82 (ENSOARG00020016514) #18	SLC25A34 (ENSOARG00020016601) #19	PLEKHM2 (ENSOARG00020016680) #20	AGMAT (ENSOARG00020017341) #22	DNAJC16 (ENSOARG00020017433) #23	CASP9 (ENSOARG00020017778) #24	ENSOARG00020017822 #25	CTRC (ENSOARG00020017905) #26	EFHD2 (ENSOARG00020017962) #27	FHAD1 (ENSOARG00020018014) #28	TMEM51 (ENSOARG00020018527) #29	KAZN (ENSOARG00020018607) #31	ENSOARG00020019315	PRDM2 (ENSOARG00020019392) #32	PDPN (ENSOARG00020020058)	LRRC38 (ENSOARG00020020097) #34	ENSOARG00020020120	ENSOARG00020009198	ENSOARG00020009285
Goat	MODERN SPECIES	7	HES4 (ENSCHIG00000025283)	PERM1 (ENSCHIG00000016178)	PLEKHN1 (ENSCHIG00000024988)	KLHL17 (ENSCHIG00000013701)	NOC2L (ENSCHIG00000017187)	SAMD11 (ENSCHIG00000027069)	ZBTB17 (ENSCHIG00000011648) #15	SPEN (ENSCHIG00000025070) #16	ENSCHIG00000026022	FBLIM1 (ENSCHIG00000017802) #17	TMEM82 (ENSCHIG00000003584) #18	SLC25A34 (ENSCHIG00000019912) #19	PLEKHM2 (ENSCHIG00000024452) #20	RSC1A1 (ENSCHIG00000007845) #21	DDI2 (ENSCHIG00000018822)	AGMAT (ENSCHIG00000026472) #22	DNAJC16 (ENSCHIG00000015911) #23	CASP9 (ENSCHIG00000011738) #24	ENSCHIG00000024541 #25	ENSCHIG00000024451 #25	EFHD2 (ENSCHIG00000014798) #27	FHAD1 (ENSCHIG00000025559) #28	TMEM51 (ENSCHIG00000026268) #29	KAZN (ENSCHIG00000017691) #31	ENSCHIG00000006445	ENSCHIG00000010486 ##31	PRDM2 (ENSCHIG00000023399) #32	PDPN (ENSCHIG00000018527)	LRRC38 (ENSCHIG00000025277) #34	ENSCHIG00000014605	ENSCHIG00000004814
Bovinae	ANCESTRAL SPECIES	12	ENSGT00940000162007	ENSGT00940000163056	ENSGT00390000017652	ENSGT00390000003618	ENSGT00940000157635	ENSGT00390000010057	ENSGT00940000160830	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b
Bos	ANCESTRAL SPECIES	12	ENSGT00940000163056	ENSGT00390000017652	ENSGT00390000003618	ENSGT00940000157635	ENSGT00390000010057	ENSGT00940000160830	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.b	ENSGT00940000154141.B.t.b	ENSGT00940000159003.d #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b
Bos_b	ANCESTRAL SPECIES	27	ENSGT00940000162007	ENSGT00940000163056	ENSGT00390000017652	ENSGT00940000157635	ENSGT00390000010057	ENSGT00940000160830	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.b	ENSGT00940000154141.B.t.b	ENSGT00940000159003.d #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.b.a	ENSGT01030000234531.A.b.b.b.i.a.b.c.a.a
Hybrid Bos Indicus	MODERN SPECIES	7	ISG15 (ENSBIXG00005001332)	HES4 (ENSBIXG00005012424)	ENSBIXG00005012418	KLHL17 (ENSBIXG00005006111)	NOC2L (ENSBIXG00005000390)	SAMD11 (ENSBIXG00005001277)	ZBTB17 (ENSBIXG00005012197) #15	SPEN (ENSBIXG00005005959) #16	ENSBIXG00005012123	ENSBIXG00005012103	FBLIM1 (ENSBIXG00005012085) #17	TMEM82 (ENSBIXG00005012046) #18	SLC25A34 (ENSBIXG00005012016) #19	PLEKHM2 (ENSBIXG00005012000) #20	ENSBIXG00005011928 #21	AGMAT (ENSBIXG00005000434) #22	DNAJC16 (ENSBIXG00005001178) #23	CASP9 (ENSBIXG00005005479) #24	ENSBIXG00005005955 #25	ENSBIXG00005011756 #25	EFHD2 (ENSBIXG00005011720) #27	FHAD1 (ENSBIXG00005011647) #28	TMEM51 (ENSBIXG00005011327) #29	KAZN (ENSBIXG00005011261) #31	ENSBIXG00005005375	PRDM2 (ENSBIXG00005007097) #32	ENSBIXG00005000979	LRRC38 (ENSBIXG00005000595) #34	ENSBIXG00005006420	ENSBIXG00005010530	ENSBIXG00005010457
Cow	MODERN SPECIES	7	RNF223 (ENSBTAG00000046758)	AGRN (ENSBTAG00000013191)	ISG15 (ENSBTAG00000014707)	HES4 (ENSBTAG00000014705)	PERM1 (ENSBTAG00000014540)	KLHL17 (ENSBTAG00000013813)	NOC2L (ENSBTAG00000016528)	SAMD11 (ENSBTAG00000008739)	ZBTB17 (ENSBTAG00000018730) #15	SPEN (ENSBTAG00000018729) #16	FBLIM1 (ENSBTAG00000018725) #17	TMEM82 (ENSBTAG00000018724) #18	SLC25A34 (ENSBTAG00000018723) #19	PLEKHM2 (ENSBTAG00000018722) #20	ENSBTAG00000039662 #21	AGMAT (ENSBTAG00000002478) #22	DNAJC16 (ENSBTAG00000002476) #23	CASP9 (ENSBTAG00000002472) #24	CELA2A (ENSBTAG00000024496) #25	CTRC (ENSBTAG00000024497) #25	EFHD2 (ENSBTAG00000009048) #27	FHAD1 (ENSBTAG00000002408) #28	TMEM51 (ENSBTAG00000005300) #29	KAZN (ENSBTAG00000015606) #31	ENSBTAG00000054228 #31	ENSBTAG00000050764 ##31	PRDM2 (ENSBTAG00000020552) #32	PDPN (ENSBTAG00000001788)	LRRC38 (ENSBTAG00000017883) #34	ENSBTAG00000024791	ENSBTAG00000050422
Bos_a	ANCESTRAL SPECIES	8	ENSGT00940000163056	ENSGT00390000017652	ENSGT00390000003618	ENSGT00940000157635	ENSGT00390000010057	ENSGT00940000160830	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.b.b.a.a.b.a.b.b	ENSGT00940000154141.B.t.b	ENSGT00940000159003.d #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b.i.a.a.b.b	ENSGT01030000234531.A.b.b.b.i.a.a.b.a.a.a.a.b	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.a.a.a
Domestic yak	MODERN SPECIES	5	HES4 (ENSBGRG00000016269)	ENSBGRG00000016300	PLEKHN1 (ENSBGRG00000016380)	KLHL17 (ENSBGRG00000016634)	NOC2L (ENSBGRG00000016844)	SAMD11 (ENSBGRG00000017044)	ZBTB17 (ENSBGRG00000017262) #15	SPEN (ENSBGRG00000017603) #16	ENSBGRG00000018650	ENSBGRG00000018679	ENSBGRG00000018722 #17	TMEM82 (ENSBGRG00000018870) #18	SLC25A34 (ENSBGRG00000018908) #19	PLEKHM2 (ENSBGRG00000019013) #20	ENSBGRG00000019177 #21	AGMAT (ENSBGRG00000019283) #22	DNAJC16 (ENSBGRG00000019367) #23	CASP9 (ENSBGRG00000019581) #24	ENSBGRG00000019856 #25	CTRC (ENSBGRG00000019947) #26	EFHD2 (ENSBGRG00000020005) #27	FHAD1 (ENSBGRG00000020058) #28	TMEM51 (ENSBGRG00000020549) #29	KAZN (ENSBGRG00000020603) #31	ENSBGRG00000020912	PRDM2 (ENSBGRG00000020945) #32	ENSBGRG00000021152	LRRC38 (ENSBGRG00000021255) #34	ENSBGRG00000021291	ENSBGRG00000021323	ENSBGRG00000021379
Wild yak	MODERN SPECIES	185	RNF223 (ENSBMUG00000024724)	AGRN (ENSBMUG00000025260)	ISG15 (ENSBMUG00000025431)	ENSBMUG00000025435	PLEKHN1 (ENSBMUG00000025439)	KLHL17 (ENSBMUG00000025442)	NOC2L (ENSBMUG00000025453)	SAMD11 (ENSBMUG00000025476)	ZBTB17 (ENSBMUG00000025489) #15	SPEN (ENSBMUG00000025507) #16	FBLIM1 (ENSBMUG00000025515) #17	TMEM82 (ENSBMUG00000025518) #18	SLC25A34 (ENSBMUG00000025524) #19	PLEKHM2 (ENSBMUG00000025554) #20	ENSBMUG00000025563 #21	AGMAT (ENSBMUG00000025575) #22	DNAJC16 (ENSBMUG00000025587) #23	CASP9 (ENSBMUG00000025595) #24	ENSBMUG00000025605 #25	CTRC (ENSBMUG00000025619) #26	EFHD2 (ENSBMUG00000025629) #27	FHAD1 (ENSBMUG00000025658) #28	TMEM51 (ENSBMUG00000025671) #29	KAZN (ENSBMUG00000025682) #31	ENSBMUG00000025687	ENSBMUG00000025697 #32
American bison	MODERN SPECIES	3204	HES4 (ENSBBBG00000015944)	ENSBBBG00000002585	PLEKHN1 (ENSBBBG00000015929)	KLHL17 (ENSBBBG00000015903)	NOC2L (ENSBBBG00000015879)	SAMD11 (ENSBBBG00000015819)	ZBTB17 (ENSBBBG00000003462) #15	SPEN (ENSBBBG00000003887) #16	ENSBBBG00000015562	FBLIM1 (ENSBBBG00000015556) #17	TMEM82 (ENSBBBG00000007137) #18	SLC25A34 (ENSBBBG00000015510) #19	PLEKHM2 (ENSBBBG00000003857) #20	RSC1A1 (ENSBBBG00000015392) #21	DDI2 (ENSBBBG00000003839)	AGMAT (ENSBBBG00000015382) #22	DNAJC16 (ENSBBBG00000015369) #23	CASP9 (ENSBBBG00000003489) #24	ENSBBBG00000003506 #25	ENSBBBG00000001259 #25	EFHD2 (ENSBBBG00000001289) #27	FHAD1 (ENSBBBG00000001305) #28	TMEM51 (ENSBBBG00000015300) #29	KAZN (ENSBBBG00000015286) #31	PRDM2 (ENSBBBG00000015229) #32	ENSBBBG00000015215	LRRC38 (ENSBBBG00000015206) #34	ENSBBBG00000015198	ENSBBBG00000003551	ENSBBBG00000015151	ENSBBBG00000015138
Siberian musk deer	MODERN SPECIES	389	ISG15 (ENSMMSG00000008567)	HES4 (ENSMMSG00000008537)	PERM1 (ENSMMSG00000008527)	PLEKHN1 (ENSMMSG00000008461)	KLHL17 (ENSMMSG00000008316)	NOC2L (ENSMMSG00000008201)	SAMD11 (ENSMMSG00000008107)	ZBTB17 (ENSMMSG00000007924) #15	SPEN (ENSMMSG00000007827) #16	FBLIM1 (ENSMMSG00000007749) #17	TMEM82 (ENSMMSG00000007707) #18	SLC25A34 (ENSMMSG00000007677) #19	PLEKHM2 (ENSMMSG00000007626) #20	RSC1A1 (ENSMMSG00000007605) #21	ENSMMSG00000007570	AGMAT (ENSMMSG00000007536) #22	DNAJC16 (ENSMMSG00000007464) #23	CASP9 (ENSMMSG00000007413) #24	ENSMMSG00000007363 #25	ENSMMSG00000007296 #25	EFHD2 (ENSMMSG00000007253) #27	FHAD1 (ENSMMSG00000006911) #28	TMEM51 (ENSMMSG00000006826) #29	KAZN (ENSMMSG00000006323) #31	PRDM2 (ENSMMSG00000006211) #32	PDPN (ENSMMSG00000006182)	LRRC38 (ENSMMSG00000006158) #34	ENSMMSG00000006132	ENSMMSG00000005826	ENSMMSG00000005756	ENSMMSG00000005659
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b
Carnivora	ANCESTRAL SPECIES	1	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553
Caniformia	ANCESTRAL SPECIES	2	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630
Ursidae	ANCESTRAL SPECIES		ENSGT00440000039706 #8	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724	ENSGT00940000170703.b
Ursus	ANCESTRAL SPECIES		ENSGT00440000039706 #8	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957.y #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000163979	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724
Polar bear	MODERN SPECIES	189	NECAP2 (ENSUMAG00000021442)	ENSUMAG00000021447	SZRD1 (ENSUMAG00000021465) #7	FBXO42 (ENSUMAG00000021467) #8	CPLANE2 (ENSUMAG00000021472) #9	ARHGEF19 (ENSUMAG00000021478) #10	ENSUMAG00000021538 #13	HSPB7 (ENSUMAG00000021617) #14	SRARP (ENSUMAG00000021624)	ENSUMAG00000021628 #15	SPEN (ENSUMAG00000021641) #16	FBLIM1 (ENSUMAG00000021656) #17	SLC25A34 (ENSUMAG00000021659) #19	PLEKHM2 (ENSUMAG00000021666) #20	ENSUMAG00000021700 #21	AGMAT (ENSUMAG00000021705) #22	DNAJC16 (ENSUMAG00000021707) #23	CASP9 (ENSUMAG00000021709) #24	CTRC (ENSUMAG00000021713) #26	EFHD2 (ENSUMAG00000021718) #27	FHAD1 (ENSUMAG00000021726) #28	ENSUMAG00000021738 #29	KAZN (ENSUMAG00000021744) #31	PRDM2 (ENSUMAG00000021770) #32	ENSUMAG00000021778	ENSUMAG00000021779	CFAP107 (ENSUMAG00000021780)	AADACL3 (ENSUMAG00000021783)	AADACL4 (ENSUMAG00000021786)	DHRS3 (ENSUMAG00000021788)	VPS13D (ENSUMAG00000021837)
Giant Panda	MODERN SPECIES	2	ENSAMEG00000024376 #8	CPLANE2 (ENSAMEG00000011576) #9	ARHGEF19 (ENSAMEG00000011587) #10	EPHA2 (ENSAMEG00000011607) #11	FAM131C (ENSAMEG00000011729) #12	ENSAMEG00000011731 #13	HSPB7 (ENSAMEG00000011779) #14	SRARP (ENSAMEG00000030564)	ENSAMEG00000030804 #15	SPEN (ENSAMEG00000011817) #16	FBLIM1 (ENSAMEG00000011829) #17	TMEM82 (ENSAMEG00000011841) #18	SLC25A34 (ENSAMEG00000011844) #19	PLEKHM2 (ENSAMEG00000011853) #20	ENSAMEG00000018736 #21	AGMAT (ENSAMEG00000011881) #22	ENSAMEG00000011891 #23	ENSAMEG00000011912 #24	ENSAMEG00000011940 #26	ENSAMEG00000027158 #27	FHAD1 (ENSAMEG00000011967) #28	TMEM51 (ENSAMEG00000027328) #29	KAZN (ENSAMEG00000011994) #31	PRDM2 (ENSAMEG00000006714) #32	PDPN (ENSAMEG00000029968)	LRRC38 (ENSAMEG00000006725) #34	CFAP107 (ENSAMEG00000006730)	AADACL3 (ENSAMEG00000030191)	AADACL4 (ENSAMEG00000006740)	DHRS3 (ENSAMEG00000006744)	ENSAMEG00000000611
Mustelinae	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744.c #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630
American mink	MODERN SPECIES	9	CPLANE2 (ENSNVIG00000012277) #9	ARHGEF19 (ENSNVIG00000012250) #10	EPHA2 (ENSNVIG00000012219) #11	FAM131C (ENSNVIG00000012213) #12	ENSNVIG00000012038 #13	HSPB7 (ENSNVIG00000012018) #14	SRARP (ENSNVIG00000012000)	ZBTB17 (ENSNVIG00000011847) #15	SPEN (ENSNVIG00000011765) #16	FBLI1 (ENSNVIG00000011696) #17	TMEM82 (ENSNVIG00000011685) #18	SLC25A34 (ENSNVIG00000011676) #19	PLEKHM2 (ENSNVIG00000011636) #20	ENSNVIG00000011620 #21	DDI2 (ENSNVIG00000011569)	AGMAT (ENSNVIG00000011545) #22	DJC16 (ENSNVIG00000011474) #23	CASP9 (ENSNVIG00000011449) #24	CTRC (ENSNVIG00000011438) #26	EFHD2 (ENSNVIG00000011427) #27	FHAD1 (ENSNVIG00000011294) #28	TMEM51 (ENSNVIG00000011243) #29	KAZN (ENSNVIG00000011169) #31	ENSNVIG00000011151	PRDM2 (ENSNVIG00000011077) #32	PDPN (ENSNVIG00000011020)	LRRC38 (ENSNVIG00000011014) #34	CFAP107 (ENSNVIG00000010992)	AADACL3 (ENSNVIG00000010988)	ADCL4 (ENSNVIG00000010972)	DHRS3 (ENSNVIG00000010957)
Ferret	MODERN SPECIES	167	CPLANE2 (ENSMPUG00000016289) #9	ARHGEF19 (ENSMPUG00000016295) #10	EPHA2 (ENSMPUG00000016308) #11	FAM131C (ENSMPUG00000016309) #12	ENSMPUG00000016310 #13	HSPB7 (ENSMPUG00000016311) #14	SRARP (ENSMPUG00000016312)	ZBTB17 (ENSMPUG00000016313) #15	SPEN (ENSMPUG00000016317) #16	FBLIM1 (ENSMPUG00000016318) #17	TMEM82 (ENSMPUG00000016323) #18	SLC25A34 (ENSMPUG00000016326) #19	PLEKHM2 (ENSMPUG00000016329) #20	RSC1A1 (ENSMPUG00000018833) #21	DDI2 (ENSMPUG00000016332)	AGMAT (ENSMPUG00000016340) #22	DNAJC16 (ENSMPUG00000016341) #23	CASP9 (ENSMPUG00000016342) #24	CTRC (ENSMPUG00000016345) #26	EFHD2 (ENSMPUG00000016346) #27	FHAD1 (ENSMPUG00000016348) #28	TMEM51 (ENSMPUG00000016350) #29	KAZN (ENSMPUG00000016351) #31	PRDM2 (ENSMPUG00000016352) #32	ENSMPUG00000016353	PDPN (ENSMPUG00000016354)	LRRC38 (ENSMPUG00000016355) #34	ENSMPUG00000016357	CFAP107 (ENSMPUG00000016365)	AADACL3 (ENSMPUG00000016368)	AADACL4 (ENSMPUG00000016369)
Canidae	ANCESTRAL SPECIES	14	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000163565
Dingo	MODERN SPECIES	41	ARHGEF19 (ENSCAFG00020004944) #10	EPHA2 (ENSCAFG00020004936) #11	FAM131C (ENSCAFG00020004930) #12	ENSCAFG00020004915 #13	HSPB7 (ENSCAFG00020004912) #14	SRARP (ENSCAFG00020004910)	ZBTB17 (ENSCAFG00020004905) #15	ENSCAFG00020004896 #16	ENSCAFG00020004893 #16	FBLIM1 (ENSCAFG00020004885) #17	TMEM82 (ENSCAFG00020004877) #18	SLC25A34 (ENSCAFG00020004858) #19	PLEKHM2 (ENSCAFG00020004845) #20	RSC1A1 (ENSCAFG00020004838) #21	DDI2 (ENSCAFG00020004832)	AGMAT (ENSCAFG00020004808) #22	ENSCAFG00020004806 #23	CASP9 (ENSCAFG00020004802) #24	CTRC (ENSCAFG00020004793) #26	ENSCAFG00020004790 #27	FHAD1 (ENSCAFG00020004782) #28	TMEM51 (ENSCAFG00020004778) #29	ENSCAFG00020004777	KAZN (ENSCAFG00020004768) #31	ENSCAFG00020004760 ##31	PRDM2 (ENSCAFG00020004754) #32	PDPN (ENSCAFG00020004738)	LRRC38 (ENSCAFG00020004735) #34	CFAP107 (ENSCAFG00020004715)	AADACL3 (ENSCAFG00020004712)	AADACL4 (ENSCAFG00020004697)
Dog	MODERN SPECIES	11	FBXO42 (ENSCAFG00845004752) #8	CPLANE2 (ENSCAFG00845004760) #9	ARHGEF19 (ENSCAFG00845004770) #10	EPHA2 (ENSCAFG00845004794) #11	FAM131C (ENSCAFG00845004819) #12	ENSCAFG00845004851 #13	HSPB7 (ENSCAFG00845004889) #14	SRARP (ENSCAFG00845004899)	ZBTB17 (ENSCAFG00845004912) #15	SPEN (ENSCAFG00845004928) #16	FBLIM1 (ENSCAFG00845004948) #17	TMEM82 (ENSCAFG00845004965) #18	SLC25A34 (ENSCAFG00845004977) #19	PLEKHM2 (ENSCAFG00845004994) #20	ENSCAFG00845000240 #21	AGMAT (ENSCAFG00845000281) #22	DNAJC16 (ENSCAFG00845000315) #23	CASP9 (ENSCAFG00845000379) #24	ENSCAFG00845000444 #26	FHAD1 (ENSCAFG00845000555) #28	TMEM51 (ENSCAFG00845000766) #29	KAZN (ENSCAFG00845000851) #31	PRDM2 (ENSCAFG00845001004) #32	PDPN (ENSCAFG00845001081)	LRRC38 (ENSCAFG00845001236) #34	CFAP107 (ENSCAFG00845001256)	AADACL3 (ENSCAFG00845001278)	ENSCAFG00845001302	DHRS3 (ENSCAFG00845001328)	ENSCAFG00845001424	ENSCAFG00845001458
Red fox	MODERN SPECIES	88	CPLANE2 (ENSVVUG00000028965) #9	ARHGEF19 (ENSVVUG00000028962) #10	EPHA2 (ENSVVUG00000028960) #11	FAM131C (ENSVVUG00000028958) #12	CLCNKA (ENSVVUG00000028957) #13	HSPB7 (ENSVVUG00000028955) #14	SRARP (ENSVVUG00000028954)	ZBTB17 (ENSVVUG00000028953) #15	SPEN (ENSVVUG00000028951) #16	FBLIM1 (ENSVVUG00000028949) #17	TMEM82 (ENSVVUG00000028948) #18	SLC25A34 (ENSVVUG00000028947) #19	PLEKHM2 (ENSVVUG00000028945) #20	RSC1A1 (ENSVVUG00000028944) #21	DDI2 (ENSVVUG00000028943)	AGMAT (ENSVVUG00000028942) #22	DNAJC16 (ENSVVUG00000028941) #23	CTRC (ENSVVUG00000028940) #26	CASP9 (ENSVVUG00000028939) #24	EFHD2 (ENSVVUG00000028938) #27	FHAD1 (ENSVVUG00000028931) #28	TMEM51 (ENSVVUG00000028929) #29	KAZN (ENSVVUG00000028921) #31	ENSVVUG00000028916 ##31	ENSVVUG00000028915	ENSVVUG00000028903	ENSVVUG00000028901	PRDM2 (ENSVVUG00000028889) #32	PDPN (ENSVVUG00000028880)	ENSVVUG00000028879 #34	CUNH1orf158 (ENSVVUG00000028877)
Felidae	ANCESTRAL SPECIES	18	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553
Panthera	ANCESTRAL SPECIES	4	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553
Tiger	MODERN SPECIES	187	ENSPTIG00000018563	SPATA21 (ENSPTIG00000018766)	SZRD1 (ENSPTIG00000019102) #7	FBXO42 (ENSPTIG00000019382) #8	CPLANE2 (ENSPTIG00000019583) #9	ARHGEF19 (ENSPTIG00000019762) #10	EPHA2 (ENSPTIG00000000837) #11	FAM131C (ENSPTIG00000002805) #12	ENSPTIG00000004645 #13	HSPB7 (ENSPTIG00000006884) #14	SRARP (ENSPTIG00000007048)	ENSPTIG00000008568 #17	SLC25A34 (ENSPTIG00000008906) #19	PLEKHM2 (ENSPTIG00000009093) #20	DDI2 (ENSPTIG00000009951)	AGMAT (ENSPTIG00000010031) #22	DNAJC16 (ENSPTIG00000010992) #23	CASP9 (ENSPTIG00000011356) #24	CTRC (ENSPTIG00000011663) #26	ENSPTIG00000011875 #28	ENSPTIG00000012301 #29	ENSPTIG00000012333 #31	ENSPTIG00000012597 #31	ENSPTIG00000013102	ENSPTIG00000013314	PRDM2 (ENSPTIG00000013350) #32	ENSPTIG00000013585	ENSPTIG00000014625	CFAP107 (ENSPTIG00000015353)	AADACL3 (ENSPTIG00000015446)	AADACL4 (ENSPTIG00000015939)
Panthera_a	ANCESTRAL SPECIES	14	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00910000148116	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553
lion	MODERN SPECIES	8	FBXO42 (ENSPLOG00000019478) #8	CPLANE2 (ENSPLOG00000019512) #9	ARHGEF19 (ENSPLOG00000019539) #10	EPHA2 (ENSPLOG00000019631) #11	FAM131C (ENSPLOG00000019728) #12	ENSPLOG00000019843 #13	HSPB7 (ENSPLOG00000004753) #14	SRARP (ENSPLOG00000004770)	ZBTB17 (ENSPLOG00000004804) #15	SPEN (ENSPLOG00000004845) #16	FBLIM1 (ENSPLOG00000004900) #17	TMEM82 (ENSPLOG00000004930) #18	SLC25A34 (ENSPLOG00000004954) #19	PLEKHM2 (ENSPLOG00000004965) #20	DDI2 (ENSPLOG00000004991)	AGMAT (ENSPLOG00000005024) #22	DNAJC16 (ENSPLOG00000005054) #23	CASP9 (ENSPLOG00000005099) #24	CTRC (ENSPLOG00000005134) #26	EFHD2 (ENSPLOG00000005163) #27	ENSPLOG00000005191 #28	TMEM51 (ENSPLOG00000005219) #29	ENSPLOG00000005226 #31	ENSPLOG00000005241 #31	ENSPLOG00000005254 ##31	ENSPLOG00000005262	PRDM2 (ENSPLOG00000005291) #32	PDPN (ENSPLOG00000005381)	LRRC38 (ENSPLOG00000005430) #34	ENSPLOG00000005536	CFAP107 (ENSPLOG00000005718)
leopard	MODERN SPECIES	37	FBXO42 (ENSPPRG00000023922) #8	CPLANE2 (ENSPPRG00000023775) #9	ARHGEF19 (ENSPPRG00000023656) #10	EPHA2 (ENSPPRG00000023510) #11	FAM131C (ENSPPRG00000023268) #12	ENSPPRG00000000408 #13	HSPB7 (ENSPPRG00000000845) #14	SRARP (ENSPPRG00000000970)	ZBTB17 (ENSPPRG00000002547) #15	FBLIM1 (ENSPPRG00000003677) #17	TMEM82 (ENSPPRG00000003864) #18	SLC25A34 (ENSPPRG00000004027) #19	PLEKHM2 (ENSPPRG00000006492) #20	RSC1A1 (ENSPPRG00000014925) #21	DDI2 (ENSPPRG00000007095)	AGMAT (ENSPPRG00000007223) #22	DNAJC16 (ENSPPRG00000008217) #23	CASP9 (ENSPPRG00000009345) #24	CTRC (ENSPPRG00000009465) #26	EFHD2 (ENSPPRG00000010382) #27	ENSPPRG00000011408 #28	TMEM51 (ENSPPRG00000011953) #29	ENSPPRG00000012106	ENSPPRG00000014628 #31	ENSPPRG00000014940	ENSPPRG00000020081	PRDM2 (ENSPPRG00000022577) #32	PDPN (ENSPPRG00000000655)	LRRC38 (ENSPPRG00000000810) #34	ENSPPRG00000001268	CFAP107 (ENSPPRG00000002122)
Cat	MODERN SPECIES	239	FBXO42 (ENSFCAG00000031057) #8	CPLANE2 (ENSFCAG00000035026) #9	ARHGEF19 (ENSFCAG00000029384) #10	EPHA2 (ENSFCAG00000010170) #11	FAM131C (ENSFCAG00000010169) #12	ENSFCAG00000010168 #13	HSPB7 (ENSFCAG00000036036) #14	SRARP (ENSFCAG00000044158)	ZBTB17 (ENSFCAG00000023421) #15	SPEN (ENSFCAG00000010165) #16	FBLIM1 (ENSFCAG00000011590) #17	TMEM82 (ENSFCAG00000011589) #18	SLC25A34 (ENSFCAG00000011588) #19	PLEKHM2 (ENSFCAG00000011586) #20	ENSFCAG00000011585 #21	AGMAT (ENSFCAG00000011584) #22	DNAJC16 (ENSFCAG00000011582) #23	CASP9 (ENSFCAG00000026776) #24	CTRC (ENSFCAG00000003268) #26	EFHD2 (ENSFCAG00000041741) #27	ENSFCAG00000003267 #28	TMEM51 (ENSFCAG00000043261) #29	KAZN (ENSFCAG00000038995) #31	PRDM2 (ENSFCAG00000032471) #32	PDPN (ENSFCAG00000007570)	LRRC38 (ENSFCAG00000000580) #34	ENSFCAG00000023782	CFAP107 (ENSFCAG00000027769)	AADACL3 (ENSFCAG00000031519)	DHRS3 (ENSFCAG00000000576)	VPS13D (ENSFCAG00000003779)
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b.l #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000158724
Chiroptera	ANCESTRAL SPECIES		ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b.l #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000158724
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b.l #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000158724
Greater horseshoe bat	MODERN SPECIES	27	FBXO42 (ENSRFEG00010013069) #8	CPLANE2 (ENSRFEG00010013011) #9	ARHGEF19 (ENSRFEG00010012793) #10	EPHA2 (ENSRFEG00010012706) #11	FAM131C (ENSRFEG00010012642) #12	ENSRFEG00010011668 #13	HSPB7 (ENSRFEG00010011506) #14	ENSRFEG00010011449	ZBTB17 (ENSRFEG00010011332) #15	SPEN (ENSRFEG00010011277) #16	FBLIM1 (ENSRFEG00010011168) #17	TMEM82 (ENSRFEG00010011094) #18	SLC25A34 (ENSRFEG00010011058) #19	PLEKHM2 (ENSRFEG00010010902) #20	ENSRFEG00010010770 #21	AGMAT (ENSRFEG00010010690) #22	DNAJC16 (ENSRFEG00010010616) #23	CASP9 (ENSRFEG00010010566) #24	ENSRFEG00010010440 #25	CTRC (ENSRFEG00010010289) #26	EFHD2 (ENSRFEG00010010221) #27	FHAD1 (ENSRFEG00010009808) #28	TMEM51 (ENSRFEG00010009731) #29	KAZN (ENSRFEG00010009239) #31	PRDM2 (ENSRFEG00010009040) #32	PDPN (ENSRFEG00010008924)	LRRC38 (ENSRFEG00010008885) #34	ENSRFEG00010008828	ENSRFEG00010008754	ENSRFEG00010008691	ENSRFEG00010008603
Microbat	MODERN SPECIES	1534				FAM131C (ENSMLUG00000009116) #12	ENSMLUG00000008328 #13	HSPB7 (ENSMLUG00000010227) #14	ENSMLUG00000010219	ZBTB17 (ENSMLUG00000025202) #15	SPEN (ENSMLUG00000010144) #16	FBLIM1 (ENSMLUG00000010113) #17	TMEM82 (ENSMLUG00000028439) #18	SLC25A34 (ENSMLUG00000028747) #19	PLEKHM2 (ENSMLUG00000000500) #20	RSC1A1 (ENSMLUG00000000499) #21	DDI2 (ENSMLUG00000030669)	AGMAT (ENSMLUG00000009755) #22	DNAJC16 (ENSMLUG00000009703) #23	CASP9 (ENSMLUG00000009690) #24	ENSMLUG00000029907 #25	CTRC (ENSMLUG00000009673) #26
Megabat	MODERN SPECIES	1018														RSC1A1 (ENSPVAG00000005085) #21	DDI2 (ENSPVAG00000005084)	AGMAT (ENSPVAG00000005083) #22	DNAJC16 (ENSPVAG00000005081) #23	CASP9 (ENSPVAG00000005080) #24	ENSPVAG00000005074 #25
Equus	ANCESTRAL SPECIES	2	ENSGT00390000006521 #9	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b.l #16	ENSGT00940000157087.a.b.k #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000162571 #34	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553	ENSGT00940000162160
Horse	MODERN SPECIES	11	SZRD1 (ENSECAG00000016013) #7	FBXO42 (ENSECAG00000018375) #8	ARHGEF19 (ENSECAG00000024002) #10	EPHA2 (ENSECAG00000007650) #11	FAM131C (ENSECAG00000023469) #12	ENSECAG00000023589 #13	SRARP (ENSECAG00000024814)	ZBTB17 (ENSECAG00000024826) #15	SPEN (ENSECAG00000008833) #16	ENSECAG00000050306 #16	FBLIM1 (ENSECAG00000011874) #17	TMEM82 (ENSECAG00000013016) #18	SLC25A34 (ENSECAG00000013382) #19	PLEKHM2 (ENSECAG00000014652) #20	ENSECAG00000041115 #21	AGMAT (ENSECAG00000008308) #22	DNAJC16 (ENSECAG00000010422) #23	CASP9 (ENSECAG00000017291) #24	ENSECAG00000020902 #25	CTRC (ENSECAG00000025069) #26	FHAD1 (ENSECAG00000025126) #28	KAZN (ENSECAG00000006829) #31	PRDM2 (ENSECAG00000008911)	ENSECAG00000050440 #32	ENSECAG00000032595	LRRC38 (ENSECAG00000010195) #34	ENSECAG00000010285	CFAP107 (ENSECAG00000033407)	AADACL3 (ENSECAG00000013280)	DHRS3 (ENSECAG00000013582)	ENSECAG00000045103
Donkey	MODERN SPECIES	25	ARHGEF19 (ENSEASG00005015873) #10	EPHA2 (ENSEASG00005015879) #11	FAM131C (ENSEASG00005036425) #12	ENSEASG00005015892 #13	HSPB7 (ENSEASG00005028862) #14	SRARP (ENSEASG00005015903)	ZBTB17 (ENSEASG00005015905) #15	ENSEASG00005015911 #16	ENSEASG00005032545 #16	ENSEASG00005028986 #16	FBLIM1 (ENSEASG00005015915) #17	TMEM82 (ENSEASG00005015917) #18	SLC25A34 (ENSEASG00005031113) #19	PLEKHM2 (ENSEASG00005015922) #20	ENSEASG00005015927 #21	AGMAT (ENSEASG00005015929) #22	DNAJC16 (ENSEASG00005015931) #23	CASP9 (ENSEASG00005015937) #24	ENSEASG00005015940 #25	CTRC (ENSEASG00005015948) #26	EFHD2 (ENSEASG00005015953) #27	FHAD1 (ENSEASG00005015958) #28	TMEM51 (ENSEASG00005015962) #29	ENSEASG00005032223 #31	ENSEASG00005037107	ENSEASG00005027620	PRDM2 (ENSEASG00005015970) #32	ENSEASG00005028661	ENSEASG00005015975	ENSEASG00005015978 #34	ENSEASG00005015988
Eulipotyphla	ANCESTRAL SPECIES	221														ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23
Hedgehog	MODERN SPECIES	1799																AGMAT (ENSEEUG00000007176) #22	DNAJC16 (ENSEEUG00000006965) #23
Common shrew	MODERN SPECIES	1250														PLEKHM2 (ENSSARG00000010662) #20	RSC1A1 (ENSSARG00000010660) #21	AGMAT (ENSSARG00000010647) #22	DNAJC16 (ENSSARG00000010631) #23
Atlantogenata	ANCESTRAL SPECIES	4	ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016.j #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00400000022892	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000163979	ENSGT00940000161054
Afrotheria	ANCESTRAL SPECIES	14	ENSGT00390000006521 #9	ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00500000045021 #18	ENSGT00940000160016.j #19	ENSGT00390000015175 #20	ENSGT00390000005744.a #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00400000022892	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000163979	ENSGT01030000234531.A.b.e.a	ENSGT00390000014553	ENSGT00940000162160
Tenrec	MODERN SPECIES	1705																AGMAT (ENSETEG00000010687) #22	DNAJC16 (ENSETEG00000010683) #23
Afrotheria_a	ANCESTRAL SPECIES	14	ENSGT00390000006521 #9	ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00500000045021 #18	ENSGT00940000160016.j #19	ENSGT00390000015175 #20	ENSGT00390000005744.a #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00390000000013	ENSGT00940000163979	ENSGT01030000234531.A.b.e.a.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000158724
Hyrax	MODERN SPECIES	3149																AGMAT (ENSPCAG00000017033) #22	DNAJC16 (ENSPCAG00000017020) #23	ENSPCAG00000017007 #24	ENSPCAG00000017005 #25
Elephant	MODERN SPECIES	270	CPLANE2 (ENSLAFG00000027749) #9	ENSLAFG00000032724	ARHGEF19 (ENSLAFG00000032367) #10	EPHA2 (ENSLAFG00000007699) #11	FAM131C (ENSLAFG00000013096) #12	ENSLAFG00000013087 #13	HSPB7 (ENSLAFG00000018170) #14	SRARP (ENSLAFG00000010966)	ZBTB17 (ENSLAFG00000004528) #15	SPEN (ENSLAFG00000004524) #16	TMEM82 (ENSLAFG00000029120) #18	SLC25A34 (ENSLAFG00000004515) #19	PLEKHM2 (ENSLAFG00000004509) #20	ENSLAFG00000015103 #21	DDI2 (ENSLAFG00000020709)	AGMAT (ENSLAFG00000013524) #22	DNAJC16 (ENSLAFG00000013518) #23	CASP9 (ENSLAFG00000015764) #24	ENSLAFG00000015756 #25	CTRC (ENSLAFG00000027946) #26	EFHD2 (ENSLAFG00000015705) #27	FHAD1 (ENSLAFG00000015693) #28	TMEM51 (ENSLAFG00000012901) #29	KAZN (ENSLAFG00000000305) #31	PRDM2 (ENSLAFG00000012229) #32	ENSLAFG00000010389	ENSLAFG00000009340	ENSLAFG00000005998	CFAP107 (ENSLAFG00000017710)	ENSLAFG00000005997	DHRS3 (ENSLAFG00000014902)
Xenarthra	ANCESTRAL SPECIES	180						ENSGT00390000010674 #14	ENSGT00390000000265	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016.i #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.a	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29
Armadillo	MODERN SPECIES	2900						HSPB7 (ENSDNOG00000044970) #14	ENSDNOG00000039535	ZBTB17 (ENSDNOG00000001983) #15	SPEN (ENSDNOG00000041948) #16	ENSDNOG00000000845 #17	ENSDNOG00000048741	TMEM82 (ENSDNOG00000038561) #18	ENSDNOG00000006727 #19	PLEKHM2 (ENSDNOG00000006688) #20	DDI2 (ENSDNOG00000047542)	AGMAT (ENSDNOG00000003960) #22	DNAJC16 (ENSDNOG00000003939) #23	CASP9 (ENSDNOG00000041340) #24	ENSDNOG00000039038 #25	CTRC (ENSDNOG00000014878) #26	EFHD2 (ENSDNOG00000048876) #27	ENSDNOG00000034904 #28	ENSDNOG00000038014 #28	TMEM51 (ENSDNOG00000016942) #29
Sloth	MODERN SPECIES	1519																AGMAT (ENSCHOG00000001033) #22	DNAJC16 (ENSCHOG00000001027) #23
Marsupialia	ANCESTRAL SPECIES	10	ENSGT00440000039706 #8	ENSGT00390000006521 #9	ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000164106	ENSGT00390000010674 #14	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00950000182999.a.c	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000156650.h	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00940000167236	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000163565
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00390000006521 #9	ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000164106	ENSGT00390000010674 #14	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00390000005744 #21	ENSGT00950000182999.a.c	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000156650.h	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00940000167236	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000163565
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT00390000006521 #9	ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000164106	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00950000182999.a.c	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000156650.h	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00940000167236	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000163565
Diprotodontia_a	ANCESTRAL SPECIES	4	ENSGT00390000006521 #9	ENSGT00940000164482	ENSGT01030000234571.b.b.b.a.b #10	ENSGT00940000160786 #11	ENSGT00950000183106.b #12	ENSGT00940000164106	ENSGT00940000158748 #13	ENSGT00390000010674 #14	ENSGT00940000159957 #15	ENSGT00940000157087.a.b #16	ENSGT00940000159003 #17	ENSGT00500000045021 #18	ENSGT00940000160016 #19	ENSGT00390000015175 #20	ENSGT00950000182999.a.c	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000156650.h	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410 #32	ENSGT00940000167236	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000163565
Common wonbat	MODERN SPECIES	914								HSPB7 (ENSVURG00010001060) #14	ZBTB17 (ENSVURG00010001068) #15	SPEN (ENSVURG00010001113) #16	FBLIM1 (ENSVURG00010001182) #17	TMEM82 (ENSVURG00010001195) #18	SLC25A34 (ENSVURG00010001209) #19	PLEKHM2 (ENSVURG00010001231) #20	ENSVURG00010001299	AGMAT (ENSVURG00010001334) #22	DNAJC16 (ENSVURG00010001370) #23	CASP9 (ENSVURG00010001427) #24	ENSVURG00010001449 #25	CTRC (ENSVURG00010001470) #26	EFHD2 (ENSVURG00010001485) #27	TMEM51 (ENSVURG00010001506) #29	KAZN (ENSVURG00010001526) #31	ENSVURG00010001538 ##31	PRDM2 (ENSVURG00010001574) #32	LRRC38 (ENSVURG00010001587) #34
koala	MODERN SPECIES	8	CPLANE2 (ENSPCIG00000036060) #9	ENSPCIG00000029280	EPHA2 (ENSPCIG00000029279) #11	FAM131C (ENSPCIG00000033223) #12	ENSPCIG00000032934	ENSPCIG00000003755 #13	HSPB7 (ENSPCIG00000037183) #14	ENSPCIG00000031551	ZBTB17 (ENSPCIG00000028522) #15	ENSPCIG00000015952 #16	FBLIM1 (ENSPCIG00000015953) #17	TMEM82 (ENSPCIG00000028540) #18	SLC25A34 (ENSPCIG00000028542) #19	PLEKHM2 (ENSPCIG00000028544) #20	ENSPCIG00000028545	AGMAT (ENSPCIG00000016772) #22	DNAJC16 (ENSPCIG00000016773) #23	ENSPCIG00000028547	CASP9 (ENSPCIG00000028548) #24	ENSPCIG00000028549 #25	CTRC (ENSPCIG00000028550) #26	EFHD2 (ENSPCIG00000028551) #27	ENSPCIG00000028552 #28	ENSPCIG00000028555	TMEM51 (ENSPCIG00000028556) #29	KAZN (ENSPCIG00000028561) #31	ENSPCIG00000028562 ##31	PRDM2 (ENSPCIG00000036392) #32	ENSPCIG00000032121	LRRC38 (ENSPCIG00000013352) #34	ENSPCIG00000002654
Wallaby	MODERN SPECIES	2512																AGMAT (ENSMEUG00000005459) #22	DNAJC16 (ENSMEUG00000005426) #23
Tasmanian devil	MODERN SPECIES	2	SZRD1 (ENSSHAG00000029990) #7	FBXO42 (ENSSHAG00000022207) #8	CPLANE2 (ENSSHAG00000030803) #9	ENSSHAG00000010818	ARHGEF19 (ENSSHAG00000029497) #10	EPHA2 (ENSSHAG00000011625) #11	FAM131C (ENSSHAG00000030093) #12	ENSSHAG00000001076	HSPB7 (ENSSHAG00000002023) #14	ZBTB17 (ENSSHAG00000004679) #15	SPEN (ENSSHAG00000027193) #16	FBLIM1 (ENSSHAG00000006716) #17	ENSSHAG00000022872 #18	PLEKHM2 (ENSSHAG00000007916) #20	ENSSHAG00000031158 #21	AGMAT (ENSSHAG00000009265) #22	DNAJC16 (ENSSHAG00000023312) #23	ENSSHAG00000023715	CASP9 (ENSSHAG00000009783) #24	ENSSHAG00000010173 #25	CTRC (ENSSHAG00000010348) #26	EFHD2 (ENSSHAG00000024172) #27	TMEM51 (ENSSHAG00000021615) #29	KAZN (ENSSHAG00000003020) #31	PRDM2 (ENSSHAG00000014550) #32	ENSSHAG00000015346	LRRC38 (ENSSHAG00000022953) #34	CFAP107 (ENSSHAG00000005025)	ENSSHAG00000005662	ENSSHAG00000029446	DHRS3 (ENSSHAG00000004396)
Opossum	MODERN SPECIES	3	CPLANE2 (ENSMODG00000003242) #9	ENSMODG00000003265	ARHGEF19 (ENSMODG00000003301) #10	ENSMODG00000029243	ENSMODG00000042106	EPHA2 (ENSMODG00000003309) #11	FAM131C (ENSMODG00000038779) #12	ENSMODG00000003369	HSPB7 (ENSMODG00000003375) #14	ZBTB17 (ENSMODG00000003391) #15	SPEN (ENSMODG00000003411) #16	TMEM82 (ENSMODG00000003429) #18	SLC25A34 (ENSMODG00000003446) #19	PLEKHM2 (ENSMODG00000003492) #20	ENSMODG00000003515	AGMAT (ENSMODG00000003528) #22	DNAJC16 (ENSMODG00000003563) #23	ENSMODG00000050640	CASP9 (ENSMODG00000003612) #24	ENSMODG00000003649 #25	CTRC (ENSMODG00000027369) #26	ENSMODG00000025573	RER1 (ENSMODG00000008117)	PEX10 (ENSMODG00000008130)	PLCH2 (ENSMODG00000008162)	PANK4 (ENSMODG00000008199)	HES5 (ENSMODG00000008212)	ENSMODG00000008220	PRXL2B (ENSMODG00000008238)	MMEL1 (ENSMODG00000008304)	TTC34 (ENSMODG00000008310)
Platypus	MODERN SPECIES	16	NECAP2 (ENSOANG00000002102)	SZRD1 (ENSOANG00000044685) #7	FBXO42 (ENSOANG00000046784) #8	ENSOANG00000009010	EPHA2 (ENSOANG00000015001) #11	ENSOANG00000036048 ##12	ENSOANG00000004166	ENSOANG00000041309 #14	ZBTB17 (ENSOANG00000008832) #15	SPEN (ENSOANG00000050773) #16	FBLIM1 (ENSOANG00000022612) #17	ENSOANG00000008988 #18	SLC25A34 (ENSOANG00000048062) #19	PLEKHM2 (ENSOANG00000005720) #20	ENSOANG00000012072 #21	AGMAT (ENSOANG00000036729) #22	DNAJC16 (ENSOANG00000044846) #23	CASP9 (ENSOANG00000009836) #24	ENSOANG00000009837 #25	CTRC (ENSOANG00000003636) #26	EFHD2 (ENSOANG00000036701) #27	ENSOANG00000015311 #28	ENSOANG00000046034	TMEM51 (ENSOANG00000047456) #29	ENSOANG00000012958 #31	ENSOANG00000013898 #31	PRDM2 (ENSOANG00000009908) #32	PDPN (ENSOANG00000045878)	LRRC38 (ENSOANG00000047051) #34	ENSOANG00000006097	ENSOANG00000006098
Sauria	ANCESTRAL SPECIES	19	ENSGT00940000161938	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT00970000193558	ENSGT01030000234960.b	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00940000167236	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A	ENSGT00940000163565.d	ENSGT00940000164442.C
Lepidosauria	ANCESTRAL SPECIES	61	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000161938	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT01030000234960.b	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.h	ENSGT00940000163565.d	ENSGT00940000164442.C	ENSGT00940000163565.c.a
Episquamata	ANCESTRAL SPECIES	16	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00940000154417	ENSGT01060000248958	ENSGT00390000012939	ENSGT00940000162826	ENSGT00970000193558	ENSGT01030000234960.b	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.h	ENSGT00940000163565.d	ENSGT00940000164442.C	ENSGT00940000163565.c.a	ENSGT00940000164442.A.g.a
Laterata	ANCESTRAL SPECIES	59					ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT00940000154417	ENSGT01060000248958	ENSGT00390000012939	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.h	ENSGT00940000163565.d	ENSGT00940000164442.C	ENSGT00940000163565.c.a	ENSGT00940000164442.A.g.a
Common wall lizard	MODERN SPECIES	16	ENSPMRG00000012563	ERRFI1 (ENSPMRG00000012566)	ENSPMRG00000012570	ZBTB40 (ENSPMRG00000012578)	MUL1 (ENSPMRG00000012597)	CAMK2N1 (ENSPMRG00000012600)	VWA5B1 (ENSPMRG00000012602)	ENSPMRG00000012615	ENSPMRG00000012632	UBXN10 (ENSPMRG00000012634)	FAM43B (ENSPMRG00000012636)	ENSPMRG00000012640	ENSPMRG00000012645	CDA (ENSPMRG00000012649)	PINK1 (ENSPMRG00000012655)	AGMAT (ENSPMRG00000012661) #22	DNAJC16 (ENSPMRG00000012667) #23	CASP9 (ENSPMRG00000012680) #24	ENSPMRG00000012687 #25	ENSPMRG00000012696 #25	ENSPMRG00000012714 #25	EFHD2 (ENSPMRG00000012731) #27	ENSPMRG00000012738 #28	ENSPMRG00000012750 #28	TMEM51 (ENSPMRG00000012755) #29	KAZN (ENSPMRG00000012765) #31	PRDM2 (ENSPMRG00000012778) #32	LRRC38 (ENSPMRG00000012784) #34	CFAP107 (ENSPMRG00000012788)	ENSPMRG00000012792	ENSPMRG00000012794
Argentine black and white tegu	MODERN SPECIES	60	ENSSMRG00000007904	ENSSMRG00000007921	PLA2G2F (ENSSMRG00000007922)	MUL1 (ENSSMRG00000007925)	CAMK2N1 (ENSSMRG00000007926)	ENSSMRG00000007931	VWA5B1 (ENSSMRG00000007940)	ENSSMRG00000007952	ENSSMRG00000007955	UBXN10 (ENSSMRG00000007957)	FAM43B (ENSSMRG00000007960)	ENSSMRG00000007967	ENSSMRG00000007970	CDA (ENSSMRG00000007986)	PINK1 (ENSSMRG00000007989)	AGMAT (ENSSMRG00000007992) #22	DNAJC16 (ENSSMRG00000007994) #23	CASP9 (ENSSMRG00000008003) #24	ENSSMRG00000008005 #25	ENSSMRG00000008006 #25	EFHD2 (ENSSMRG00000008057) #27	FHAD1 (ENSSMRG00000008059) #28	ENSSMRG00000008064	CLDN19 (ENSSMRG00000008065)	P3H1 (ENSSMRG00000008076)	C1orf50 (ENSSMRG00000008710)	CDC42 (ENSSMRG00000008711)	WNT4 (ENSSMRG00000008712)	EPHA8 (ENSSMRG00000008717)	C1QA (ENSSMRG00000008815)	C1QC (ENSSMRG00000008817)
Toxicofera	ANCESTRAL SPECIES	41	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00940000154417	ENSGT00390000012939	ENSGT00940000162826	ENSGT00970000193558	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.h	ENSGT00940000164442.C	ENSGT00940000163565.c.a.a
Elapidae	ANCESTRAL SPECIES	40	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012141.b	ENSGT00390000004940.a.b	ENSGT00940000158938	ENSGT01080000257981	ENSGT00940000154417	ENSGT00390000012939	ENSGT00940000162826	ENSGT00970000193558	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410 #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.h	ENSGT00940000164442.C.a
Indian cobra	MODERN SPECIES	9	ENSNNAG00000013686	OTUD3 (ENSNNAG00000013721)	PLA2G2E (ENSNNAG00000013762)	ENSNNAG00000013816	PLA2G2A (ENSNNAG00000013873)	PLA2G2F (ENSNNAG00000013916)	CAMK2N1 (ENSNNAG00000013932)	VWA5B1 (ENSNNAG00000013951)	ENSNNAG00000014065	ENSNNAG00000014115	UBXN10 (ENSNNAG00000014152)	ENSNNAG00000014187	FAM43B (ENSNNAG00000014204)	ENSNNAG00000014219	PINK1 (ENSNNAG00000014240)	AGMAT (ENSNNAG00000014279) #22	ICMT (ENSNNAG00000014294)	DNAJC16 (ENSNNAG00000014327) #23	CASP9 (ENSNNAG00000014357) #24	ENSNNAG00000014388 #25	EFHD2 (ENSNNAG00000014411) #27	FHAD1 (ENSNNAG00000014449) #28	TMEM51 (ENSNNAG00000014510) #29	KAZN (ENSNNAG00000014622) #31	LRRC38 (ENSNNAG00000014752) #34	CFAP107 (ENSNNAG00000014764)	ENSNNAG00000014776	ENSNNAG00000014794	RNF207 (ENSNNAG00000014812)	GPR153 (ENSNNAG00000014862)	ENSNNAG00000014899
tuatara	MODERN SPECIES	1730											CAMK2N1 (ENSSPUG00000016979)	MUL1 (ENSSPUG00000016987)	ENSSPUG00000016997	CDA (ENSSPUG00000017006)	PINK1 (ENSSPUG00000017024)	AGMAT (ENSSPUG00000017037) #22	DNAJC16 (ENSSPUG00000017052) #23	CASP9 (ENSSPUG00000017074) #24	ENSSPUG00000017091 #25	CTRC (ENSSPUG00000017096) #26	EFHD2 (ENSSPUG00000017104) #27	TMEM51 (ENSSPUG00000017111) #29	ENSSPUG00000017119 #31	ENSSPUG00000017126 #31	ENSSPUG00000017138 #31	ENSSPUG00000017145	PRDM2 (ENSSPUG00000017183) #32
Archelosauria	ANCESTRAL SPECIES	23	ENSGT00940000161504	ENSGT00940000161938	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410.a #32	ENSGT00940000167236	ENSGT00940000159410.b #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A	ENSGT00940000163565.d	ENSGT00940000164442.C
Archosauria	ANCESTRAL SPECIES	21	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000161938	ENSGT00940000155096	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410.a #32	ENSGT00940000167236	ENSGT00940000159410.b #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A	ENSGT00940000164442.C	ENSGT00940000163565.c.a
Aves	ANCESTRAL SPECIES	27	ENSGT00940000154209.b	ENSGT01010000222287.A	ENSGT00390000001400	ENSGT00510000049175	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410.a #32	ENSGT00940000167236	ENSGT00940000159410.b #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.d	ENSGT00940000164442.A.c	ENSGT00940000164442.C
Neognathae	ANCESTRAL SPECIES	25	ENSGT00510000049175	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000154885.C	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410.a #32	ENSGT00940000167236	ENSGT00940000159410.b #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.d.a	ENSGT00940000164442.A.d.b	ENSGT00940000164442.A.c
Galloanserae	ANCESTRAL SPECIES	24	ENSGT00510000049175	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000154885.C	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410.a #32	ENSGT00940000167236	ENSGT00940000159410.b #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.d.a	ENSGT00940000164442.A.d.b	ENSGT00940000164442.A.c
Anatidae	ANCESTRAL SPECIES	19	ENSGT00510000049175	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000161938	ENSGT00940000155096	ENSGT00940000154885.C	ENSGT00390000012939	ENSGT01060000248958	ENSGT00940000154417	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT01030000234960.b	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410.a #32	ENSGT00940000167236	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.d.a	ENSGT00940000164442.A.d.b	ENSGT00940000164442.A.c	ENSGT00940000164442.C
Pink-footed goose	MODERN SPECIES	41	ENSABRG00000020880	HTR6 (ENSABRG00000020875)	TMCO4 (ENSABRG00000020868)	ENSABRG00000020866	OTUD3 (ENSABRG00000020862)	PLA2G2A (ENSABRG00000020854)	ENSABRG00000020853	UBXN10 (ENSABRG00000020851)	ENSABRG00000020849	ENSABRG00000020846	VWA5B1 (ENSABRG00000020837)	MUL1 (ENSABRG00000020835)	ENSABRG00000020833	CDA (ENSABRG00000020831)	PINK1 (ENSABRG00000020829)	AGMAT (ENSABRG00000020827) #22	DNAJC16 (ENSABRG00000020816) #23	CASP9 (ENSABRG00000020813) #24	ENSABRG00000020792 #25	EFHD2 (ENSABRG00000020787) #27	TMEM51 (ENSABRG00000020784) #29	KAZN (ENSABRG00000020782) #31	PRDM2 (ENSABRG00000020778) #32	ENSABRG00000020776	LRRC38 (ENSABRG00000020772) #34	CFAP107 (ENSABRG00000020762)	ENSABRG00000020755	ENSABRG00000020751	ENSABRG00000020748	ENSABRG00000020742	ENSABRG00000020736
Duck	MODERN SPECIES	13	C1QA (ENSAPLG00000023730)	EPHA8 (ENSAPLG00000003107)	ENSAPLG00000022256	ENSAPLG00000016334	TMCO4 (ENSAPLG00000005788)	RNF186 (ENSAPLG00000021978)	OTUD3 (ENSAPLG00000006113)	PLA2G2E (ENSAPLG00000006393)	PLA2G2D (ENSAPLG00000024116)	ENSAPLG00000030184	UBXN10 (ENSAPLG00000021708)	ENSAPLG00000017035	ENSAPLG00000028946	CDA (ENSAPLG00000018400)	PINK1 (ENSAPLG00000007692)	AGMAT (ENSAPLG00000008104) #22	DNAJC16 (ENSAPLG00000008368) #23	CASP9 (ENSAPLG00000008851) #24	ENSAPLG00000019333 #25	FHAD1 (ENSAPLG00000009303) #28	TMEM51 (ENSAPLG00000023758) #29	KAZN (ENSAPLG00000019373) #31	PRDM2 (ENSAPLG00000029288) #32	LRRC38 (ENSAPLG00000014737) #34	ENSAPLG00000017900	CFAP107 (ENSAPLG00000014733)	ENSAPLG00000014563	ENSAPLG00000014561	ENSAPLG00000014552	ENSAPLG00000014534	DHRS3 (ENSAPLG00000014342)
Phasianidae	ANCESTRAL SPECIES	23	ENSGT00390000001400	ENSGT00510000049175	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000154885.C	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410.a #32	ENSGT00940000159410.b #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.d.a	ENSGT00940000164442.A.d.b	ENSGT00940000164442.A.c
Japanese quail	MODERN SPECIES	13	TMCO4 (ENSCJPG00005018704)	RNF186 (ENSCJPG00005018705)	OTUD3 (ENSCJPG00005018706)	PLA2G2E (ENSCJPG00005018707)	PLA2G2A (ENSCJPG00005018708)	UBXN10 (ENSCJPG00005018709)	ENSCJPG00005018710	ENSCJPG00005018711	ENSCJPG00005018712	VWA5B1 (ENSCJPG00005018713)	CAMK2N1 (ENSCJPG00005018715)	FAM43B (ENSCJPG00005018716)	MUL1 (ENSCJPG00005018718)	CDA (ENSCJPG00005018722)	PINK1 (ENSCJPG00005018723)	AGMAT (ENSCJPG00005018724) #22	DNAJC16 (ENSCJPG00005000051) #23	CASP9 (ENSCJPG00005000611) #24	ENSCJPG00005000638 #25	EFHD2 (ENSCJPG00005001196) #27	TMEM51 (ENSCJPG00005001199) #29	KAZN (ENSCJPG00005001210) #31	PRDM2 (ENSCJPG00005001242) #32	ENSCJPG00005001244 #32	LRRC38 (ENSCJPG00005001246) #34	CFAP107 (ENSCJPG00005001249)	ENSCJPG00005001262	ENSCJPG00005001398	ENSCJPG00005001406	ENSCJPG00005001410	ENSCJPG00005001412
Phasianidae_b	ANCESTRAL SPECIES	33	ENSGT00390000001400	ENSGT00510000049175	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000154885.C	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410.a #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.d.a	ENSGT00940000164442.A.d.b	ENSGT00940000164442.A.c	ENSGT00940000164442.C
Chicken	MODERN SPECIES	13	TMCO4 (ENSGALG00010020666)	RNF186 (ENSGALG00010020672)	OTUD3 (ENSGALG00010020679)	PLA2G2E (ENSGALG00010020711)	PLA2G5 (ENSGALG00010020717)	UBXN10 (ENSGALG00010020767)	PLA2G2A (ENSGALG00010020777)	DDX19 (ENSGALG00010020786)	ENSGALG00010020792	VWA5B1 (ENSGALG00010020820)	CAMK2N1 (ENSGALG00010020828)	MUL1 (ENSGALG00010020831)	FAM43B (ENSGALG00010021893)	CDA (ENSGALG00010020861)	PINK1 (ENSGALG00010020873)	AGMAT (ENSGALG00010020903) #22	DNAJC16 (ENSGALG00010020924) #23	CASP9 (ENSGALG00010020932) #24	CTRC (ENSGALG00010020939) #26	EFHD2 (ENSGALG00010020950) #27	FHAD1 (ENSGALG00010020955) #28	TMEM51 (ENSGALG00010020971) #29	KAZN (ENSGALG00010021003) #31	PRDM2 (ENSGALG00010021029) #32	LRRC38 (ENSGALG00010021042) #34	PDPN (ENSGALG00010021046)	C1orf158 (ENSGALG00010021049)	AADACL3C (ENSGALG00010022178)	ENSGALG00010022183	ENSGALG00010021053	ENSGALG00010021056
Turkey	MODERN SPECIES	15	ENSMGAG00000018026	ENSMGAG00000021095	ENSMGAG00000021262	LRRC38 (ENSMGAG00000005907) #34	ENSMGAG00000005913	ENSMGAG00000005917	PRDM2 (ENSMGAG00000005888) #32	ENSMGAG00000005839 #31	CASP9 (ENSMGAG00000005586) #24	ENSMGAG00000005613 #25	EFHD2 (ENSMGAG00000019172) #27	ENSMGAG00000019136 #28	TMEM51 (ENSMGAG00000005828) #29	ENSMGAG00000005542 #23	ENSMGAG00000005498	ENSMGAG00000005524 #22	ENSMGAG00000005830	ENSMGAG00000015761	ENSMGAG00000018788	ENSMGAG00000017872	ENSMGAG00000005683	ENSMGAG00000017968	UBXN10 (ENSMGAG00000015759)	ENSMGAG00000017176	ENSMGAG00000005585	ENSMGAG00000005563	OTUD3 (ENSMGAG00000005533)	RNF186 (ENSMGAG00000005496)	ENSMGAG00000005459	ENSMGAG00000005473	TMCO4 (ENSMGAG00000005480)
Neognathae_b	ANCESTRAL SPECIES	25	ENSGT00510000049175	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000154885.C	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410.a #32	ENSGT00940000167236	ENSGT00940000159410.b #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.d.a	ENSGT00940000164442.A.d.b	ENSGT00940000164442.A.c
Passeriformes	ANCESTRAL SPECIES	22	ENSGT00510000049175	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000154885.C	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.`b.a #25	ENSGT00390000012058.c.b #27	ENSGT00990000212679	ENSGT01030000234528.B.a.a.`b.b #25	ENSGT00940000154171.A #28	ENSGT00450000040404.a	ENSGT00940000155503	ENSGT00940000161091	ENSGT00940000161227	ENSGT00940000162143	ENSGT00940000160469	ENSGT00940000159654	ENSGT00940000153675.a.a.b
Passeriformes_d	ANCESTRAL SPECIES	22	ENSGT00510000049175	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000154885.C	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.`b.a #25	ENSGT01030000234528.B.a.a.`b.b #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00450000040404.a	ENSGT00940000155503	ENSGT00940000161091	ENSGT00940000161227	ENSGT00940000162143	ENSGT00940000160469	ENSGT00940000159654	ENSGT00940000153675.a.a.b	ENSGT00390000003084
Passeriformes_g	ANCESTRAL SPECIES	35	ENSGT00510000049175	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000154885.C	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.`b.a #25	ENSGT01030000234528.B.a.a.`b.b #25	ENSGT00390000012058.c.b #27	ENSGT00990000212679	ENSGT00450000040404.a	ENSGT00940000155503	ENSGT00940000161091	ENSGT00940000161227	ENSGT00940000162143	ENSGT00940000160469	ENSGT00940000159654	ENSGT00940000153675.a.a.b	ENSGT00390000003084
Passeroidea	ANCESTRAL SPECIES	26	ENSGT00510000049175	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000154885.C	ENSGT00390000012939	ENSGT00940000154417	ENSGT01060000248958	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a.`b.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00450000040404.a	ENSGT00940000155503	ENSGT00940000161091	ENSGT00940000161227	ENSGT00940000162143	ENSGT00940000160469	ENSGT00940000159654	ENSGT00940000153675.a.a.b	ENSGT00390000003084	ENSGT00940000158725
Common canary	MODERN SPECIES	95	TMCO4 (ENSSCAG00000001466)	RNF186 (ENSSCAG00000001457)	OTUD3 (ENSSCAG00000001453)	PLA2G2E (ENSSCAG00000001446)	PLA2G2A (ENSSCAG00000001435)	ENSSCAG00000001431	ENSSCAG00000001427	ENSSCAG00000001423	ENSSCAG00000001407	VWA5B1 (ENSSCAG00000001356)	ENSSCAG00000001331	MUL1 (ENSSCAG00000001326)	FAM43B (ENSSCAG00000001321)	CDA (ENSSCAG00000001316)	PINK1 (ENSSCAG00000001288)	AGMAT (ENSSCAG00000001277) #22	DNAJC16 (ENSSCAG00000001134) #23	CASP9 (ENSSCAG00000001095) #24	ENSSCAG00000001088 #25	EFHD2 (ENSSCAG00000001074) #27	FHAD1 (ENSSCAG00000001050) #28
Zebra finch	MODERN SPECIES	14	ENSTGUG00000024231	OTUD3 (ENSTGUG00000017052)	PLA2G2E (ENSTGUG00000015886)	PLA2G2A (ENSTGUG00000024394)	ENSTGUG00000017056	UBXN10 (ENSTGUG00000019929)	ENSTGUG00000017064	ENSTGUG00000022087	VWA5B1 (ENSTGUG00000017103)	ENSTGUG00000023378	MUL1 (ENSTGUG00000024353)	ENSTGUG00000020670	FAM43B (ENSTGUG00000017109)	CDA (ENSTGUG00000022059)	PINK1 (ENSTGUG00000017113)	AGMAT (ENSTGUG00000017123) #22	DNAJC16 (ENSTGUG00000017133) #23	CASP9 (ENSTGUG00000017156) #24	ENSTGUG00000021791 #25	EFHD2 (ENSTGUG00000021308) #27	LACTBL1 (ENSTGUG00000024241)	EPHB2 (ENSTGUG00000017194)	C1QB (ENSTGUG00000024860)	C1QC (ENSTGUG00000019687)	C1QA (ENSTGUG00000017238)	EPHA8 (ENSTGUG00000017239)	WNT4 (ENSTGUG00000026088)	CDC42 (ENSTGUG00000027145)	C1orf50 (ENSTGUG00000017254)	P3H1 (ENSTGUG00000017255)	CLDN19 (ENSTGUG00000017257)
Medium ground finch	MODERN SPECIES	176	NBL1 (ENSGFOG00000009816)	HTR6 (ENSGFOG00000009821)	TMCO4 (ENSGFOG00000009827)	ENSGFOG00000009844	OTUD3 (ENSGFOG00000009852)	PLA2G2E (ENSGFOG00000009861)	PLA2G2A (ENSGFOG00000009872)	ENSGFOG00000009882	UBXN10 (ENSGFOG00000009886)	ENSGFOG00000009894	VWA5B1 (ENSGFOG00000009903)	ENSGFOG00000009933	MUL1 (ENSGFOG00000009936)	CDA (ENSGFOG00000009939)	PINK1 (ENSGFOG00000009947)	AGMAT (ENSGFOG00000009955) #22	DNAJC16 (ENSGFOG00000009964) #23	CASP9 (ENSGFOG00000010001) #24	ENSGFOG00000010014 #25	ENSGFOG00000010038 #25	ENSGFOG00000010098 #25	EFHD2 (ENSGFOG00000010225) #27	ENSGFOG00000010234	LACTBL1 (ENSGFOG00000010243)	EPHB2 (ENSGFOG00000010250)	C1QB (ENSGFOG00000010257)	C1QC (ENSGFOG00000010265)	C1QA (ENSGFOG00000010267)	EPHA8 (ENSGFOG00000010278)	WNT4 (ENSGFOG00000010305)	CDC42 (ENSGFOG00000010311)
Flycatcher	MODERN SPECIES	13	TMCO4 (ENSFALG00000010586)	NBL1 (ENSFALG00000028409)	HTR6 (ENSFALG00000010591)	ENSFALG00000028184	OTUD3 (ENSFALG00000010579)	PLA2G2A (ENSFALG00000010570)	ENSFALG00000010564	UBXN10 (ENSFALG00000028934)	ENSFALG00000010555	ENSFALG00000028355	VWA5B1 (ENSFALG00000010546)	ENSFALG00000028040	MUL1 (ENSFALG00000010538)	CDA (ENSFALG00000023675)	PINK1 (ENSFALG00000010528)	AGMAT (ENSFALG00000010520) #22	ENSFALG00000010510 #23	CASP9 (ENSFALG00000010504) #24	ENSFALG00000010502	EFHD2 (ENSFALG00000025188) #27	ENSFALG00000026379 #25	ENSFALG00000010496 #25	ENSFALG00000010485 #28	ENSFALG00000010480	EPHB2 (ENSFALG00000010435)	C1QB (ENSFALG00000010401)	C1QC (ENSFALG00000010399)	C1QA (ENSFALG00000010398)	EPHA8 (ENSFALG00000010366)	WNT4 (ENSFALG00000025820)	CDC42 (ENSFALG00000023168)
Neognathae_c	ANCESTRAL SPECIES	28	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000161938	ENSGT00940000154885.C	ENSGT00390000012939	ENSGT01060000248958	ENSGT00940000154417	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410.a #32	ENSGT00940000167236	ENSGT00940000159410.b #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A.d.a	ENSGT00940000164442.A.d.b	ENSGT00940000164442.A.c
Kakapo	MODERN SPECIES	10	RNF186 (ENSSHBG00005007254)	ENSSHBG00005007234	PLA2G2E (ENSSHBG00005007217)	PLA2G2A (ENSSHBG00005007191)	ENSSHBG00005007169	UBXN10 (ENSSHBG00005007154)	ENSSHBG00005007134	ENSSHBG00005007113	VWA5B1 (ENSSHBG00005007091)	CAMK2N1 (ENSSHBG00005007063)	MUL1 (ENSSHBG00005007046)	FAM43B (ENSSHBG00005007040)	ENSSHBG00005007028	CDA (ENSSHBG00005007006)	PINK1 (ENSSHBG00005006972)	AGMAT (ENSSHBG00005006951) #22	DNAJC16 (ENSSHBG00005006898) #23	CASP9 (ENSSHBG00005006850) #24	ENSSHBG00005006127 #25	EFHD2 (ENSSHBG00005006027) #27	FHAD1 (ENSSHBG00005005962) #28	TMEM51 (ENSSHBG00005005923) #29	KAZN (ENSSHBG00005005907) #31	ENSSHBG00005005879 #32	ENSSHBG00005005848 #32	ENSSHBG00005005835	LRRC38 (ENSSHBG00005005815) #34	CFAP107 (ENSSHBG00005005791)	ENSSHBG00005005770	ENSSHBG00005005738	ENSSHBG00005005649
Golden eagle	MODERN SPECIES	22	TMCO4 (ENSACCG00020001295)	RNF186 (ENSACCG00020001280)	OTUD3 (ENSACCG00020001269)	PLA2G2D (ENSACCG00020001241)	ENSACCG00020001227	UBXN10 (ENSACCG00020001219)	ENSACCG00020001209	ENSACCG00020001191	VWA5B1 (ENSACCG00020001113)	CAMK2N1 (ENSACCG00020001046)	MUL1 (ENSACCG00020001030)	FAM43B (ENSACCG00020001015)	ENSACCG00020001001	CDA (ENSACCG00020000989)	PINK1 (ENSACCG00020000972)	AGMAT (ENSACCG00020000956) #22	DNAJC16 (ENSACCG00020000931) #23	CASP9 (ENSACCG00020000905) #24	ENSACCG00020000876 #25	EFHD2 (ENSACCG00020000803) #27	ENSACCG00020000785	TMEM51 (ENSACCG00020000756) #29	KAZN (ENSACCG00020000725) #31	PRDM2 (ENSACCG00020000687) #32	ENSACCG00020000641 #32	LRRC38 (ENSACCG00020000579) #34	CFAP107 (ENSACCG00020000558)	ENSACCG00020000541	ENSACCG00020000496	ENSACCG00020000386	ENSACCG00020000362
African ostrich	MODERN SPECIES	236															PINK1 (ENSSCUG00000004624)	AGMAT (ENSSCUG00000004626) #22	DNAJC16 (ENSSCUG00000004631) #23	CASP9 (ENSSCUG00000004634) #24	PPIH (ENSSCUG00000004637)	YBX1 (ENSSCUG00000004640)	ENSSCUG00000004644	P3H1 (ENSSCUG00000004658)	C1orf50 (ENSSCUG00000004665)	CDC42 (ENSSCUG00000004667)	WNT4 (ENSSCUG00000004672)	ENSSCUG00000004674	ZBTB40 (ENSSCUG00000004686)	EPHA8 (ENSSCUG00000004712)	C1QA (ENSSCUG00000004720)	C1QB (ENSSCUG00000004722)	EPHB2 (ENSSCUG00000004724)
Australian saltwater crocodile	MODERN SPECIES	45	HTR6 (ENSCPRG00005018507)	TMCO4 (ENSCPRG00005018509)	RNF186 (ENSCPRG00005018510)	OTUD3 (ENSCPRG00005018512)	PLA2G2E (ENSCPRG00005018513)	PLA2G2D (ENSCPRG00005018515)	PLA2G2A (ENSCPRG00005018517)	ENSCPRG00005018520	UBXN10 (ENSCPRG00005018523)	ENSCPRG00005018526	VWA5B1 (ENSCPRG00005018530)	MUL1 (ENSCPRG00005018532)	ENSCPRG00005018533	CDA (ENSCPRG00005018536)	PINK1 (ENSCPRG00005018537)	AGMAT (ENSCPRG00005018538) #22	DNAJC16 (ENSCPRG00005018539) #23	CASP9 (ENSCPRG00005018542) #24	ENSCPRG00005018544 #25	ENSCPRG00005018548 #25	ENSCPRG00005018555 #25	ENSCPRG00005018564 #25	EFHD2 (ENSCPRG00005018569) #27	ENSCPRG00005018572 #28	TMEM51 (ENSCPRG00005018581) #29	KAZN (ENSCPRG00005018592) #31	PRDM2 (ENSCPRG00005000097) #32	LRRC38 (ENSCPRG00005000138) #34	CFAP107 (ENSCPRG00005000140)	ENSCPRG00005000148	ENSCPRG00005000150
Cryptodira	ANCESTRAL SPECIES	24	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000161938	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012939	ENSGT00940000154417	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A.h #28	ENSGT00940000154171.A.g #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000175267	ENSGT00390000002770	ENSGT00940000159410.a #32	ENSGT00940000167236	ENSGT00940000159410.b #32	ENSGT00940000162571 #34	ENSGT00390000014553
Testudinoidea	ANCESTRAL SPECIES	20	ENSGT00940000161504	ENSGT00940000161938	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012939	ENSGT00940000154417	ENSGT01100000264053	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A.h #28	ENSGT00940000154171.A.g #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410.a #32	ENSGT00940000167236	ENSGT00940000159410.b #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A	ENSGT00940000163565.d
Testudinidae	ANCESTRAL SPECIES	22	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012939	ENSGT00940000154417	ENSGT01100000264053	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT01030000234960.b	ENSGT00940000162826	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A.h #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410.a #32	ENSGT00940000159410.b #32	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A	ENSGT00940000163565.d	ENSGT00940000164442.C	ENSGT00940000164442.B
Abingdon island giant tortoise	MODERN SPECIES	679	PLA2G2E (ENSCABG00000019288)	ENSCABG00000019293	PLA2G2A (ENSCABG00000019297)	ENSCABG00000019298	PLA2G2F (ENSCABG00000019300)	UBXN10 (ENSCABG00000019301)	ENSCABG00000019336	ENSCABG00000020284	VWA5B1 (ENSCABG00000020288)	ENSCABG00000020293	MUL1 (ENSCABG00000020295)	ENSCABG00000020296	ENSCABG00000020298	CDA (ENSCABG00000020299)	PINK1 (ENSCABG00000020302)	AGMAT (ENSCABG00000020303) #22	DNAJC16 (ENSCABG00000020306) #23	CASP9 (ENSCABG00000020326) #24	ENSCABG00000020329 #25	ENSCABG00000020352 #25	EFHD2 (ENSCABG00000020354) #27	ENSCABG00000020358	TMEM51 (ENSCABG00000020360) #29	KAZN (ENSCABG00000020362) #31
Goode s thornscrub tortoise	MODERN SPECIES	9	PLA2G2E (ENSGEVG00005005980)	ENSGEVG00005006055	PLA2G2A (ENSGEVG00005006116)	PLA2G2F (ENSGEVG00005006187)	UBXN10 (ENSGEVG00005006267)	ENSGEVG00005006293	ENSGEVG00005006321	VWA5B1 (ENSGEVG00005006355)	CAMK2N1 (ENSGEVG00005006444)	MUL1 (ENSGEVG00005006466)	ENSGEVG00005006480	FAM43B (ENSGEVG00005006551)	ENSGEVG00005006573	CDA (ENSGEVG00005006604)	PINK1 (ENSGEVG00005006618)	AGMAT (ENSGEVG00005006633) #22	DNAJC16 (ENSGEVG00005006658) #23	CASP9 (ENSGEVG00005006692) #24	ENSGEVG00005006715 #25	ENSGEVG00005006814 #25	EFHD2 (ENSGEVG00005006961) #27	ENSGEVG00005006978 #28	TMEM51 (ENSGEVG00005007003) #29	ENSGEVG00005007019 #31	ENSGEVG00005007083 #31	PRDM2 (ENSGEVG00005007243) #32	LRRC38 (ENSGEVG00005007280) #34	CFAP107 (ENSGEVG00005007299)	ENSGEVG00005007362	ENSGEVG00005007460	ENSGEVG00005007527
Emydidae	ANCESTRAL SPECIES	23	ENSGT00940000161504	ENSGT00940000161938	ENSGT00940000155096	ENSGT00940000161819	ENSGT00390000012939	ENSGT00940000154417	ENSGT01100000264053	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01030000234960.b	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A.h #28	ENSGT00940000154171.A.g #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000175267	ENSGT00940000159410.a #32	ENSGT00940000167236	ENSGT00940000162571 #34	ENSGT00390000014553	ENSGT00940000164442.A	ENSGT00940000163565.d
Three-toed box turtle	MODERN SPECIES	345	OTUD3 (ENSTMTG00000022238)	PLA2G2E (ENSTMTG00000022237)	PLA2G2A (ENSTMTG00000022227)	PLA2G2F (ENSTMTG00000022209)	UBXN10 (ENSTMTG00000022201)	ENSTMTG00000022199	ENSTMTG00000022192	VWA5B1 (ENSTMTG00000022184)	CAMK2N1 (ENSTMTG00000022177)	MUL1 (ENSTMTG00000022171)	FAM43B (ENSTMTG00000022169)	ENSTMTG00000022166	ENSTMTG00000022159	CDA (ENSTMTG00000022150)	PINK1 (ENSTMTG00000022145)	AGMAT (ENSTMTG00000022143) #22	DNAJC16 (ENSTMTG00000022137) #23	CASP9 (ENSTMTG00000022129) #24	ENSTMTG00000022123 #25	ENSTMTG00000022107 #25	EFHD2 (ENSTMTG00000022096) #27	ENSTMTG00000022089 #28	ENSTMTG00000022088 #28	TMEM51 (ENSTMTG00000022083) #29	KAZN (ENSTMTG00000022064) #31	ENSTMTG00000022052	PRDM2 (ENSTMTG00000022043) #32	LRRC38 (ENSTMTG00000022034) #34	CFAP107 (ENSTMTG00000022024)	ENSTMTG00000022017	ENSTMTG00000022010
Chinese turtle	MODERN SPECIES	1815	DISP3 (ENSPSIG00000006141)	FBXO2 (ENSPSIG00000006095)	ENSPSIG00000006076	ENSPSIG00000005969	PLA2G2E (ENSPSIG00000005789)	ENSPSIG00000005759	PLA2G2A (ENSPSIG00000005632)	PLA2G2F (ENSPSIG00000005487)	UBXN10 (ENSPSIG00000001818)	ENSPSIG00000005418	ENSPSIG00000005359	MUL1 (ENSPSIG00000005341)	ENSPSIG00000005280	CDA (ENSPSIG00000005259)	PINK1 (ENSPSIG00000005240)	AGMAT (ENSPSIG00000005185) #22	DNAJC16 (ENSPSIG00000005041) #23	CASP9 (ENSPSIG00000004920) #24	ENSPSIG00000004913 #25	ENSPSIG00000004877 #25	EFHD2 (ENSPSIG00000004822) #27	ENSPSIG00000004782 #28	ENSPSIG00000004741 #28	TMEM51 (ENSPSIG00000004728) #29	KAZN (ENSPSIG00000004630) #31
Anura	ANCESTRAL SPECIES	44	ENSGT00940000154209.b	ENSGT00940000154484.A	ENSGT00390000001400	ENSGT00960000190452	ENSGT00390000016392	ENSGT00940000161504	ENSGT00940000155096	ENSGT00390000012939	ENSGT00940000154417	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B	ENSGT00390000000911	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25
Frog	MODERN SPECIES	7	tmco4 (ENSXETG00000047481)	rnf186 (ENSXETG00000037048)	pla2g2d (ENSXETG00000048297)	ubxn10 (ENSXETG00000044185)	otud3 (ENSXETG00000049262)	ENSXETG00000040911	ddx19b (ENSXETG00000028097)	vwa5b1 (ENSXETG00000042828)	CAMK2N1 (ENSXETG00000043755)	ENSXETG00000043180	mul1 (ENSXETG00000006837)	ENSXETG00000038212	fam43b (ENSXETG00000049229)	ENSXETG00000035783	cda (ENSXETG00000047477)	agmat (ENSXETG00000025999) #22	dnajc16 (ENSXETG00000006830) #23	ctrc (ENSXETG00000043366) #25	cela2a (ENSXETG00000006829) #25	casp9 (ENSXETG00000046355) #24	tmem147 (ENSXETG00000044204)	atp4a (ENSXETG00000006825)	ENSXETG00000039076	ddost (ENSXETG00000019826)	ENSXETG00000044093	ENSXETG00000041720	ENSXETG00000047927	etv2 (ENSXETG00000043339)	haus5 (ENSXETG00000031041)	ENSXETG00000045862	rbm42 (ENSXETG00000017599)
Leishan spiny toad	MODERN SPECIES	2	ENSLLEG00000020966	OTUD3 (ENSLLEG00000020996)	ENSLLEG00000021101	ENSLLEG00000021363	UBXN10 (ENSLLEG00000021654)	ENSLLEG00000021722	ENSLLEG00000021933	VWA5B1 (ENSLLEG00000022037)	CAMK2N1 (ENSLLEG00000022217)	MUL1 (ENSLLEG00000022269)	ENSLLEG00000022321	ENSLLEG00000022353	ENSLLEG00000022436	CDA (ENSLLEG00000022500)	ENSLLEG00000022556	AGMAT (ENSLLEG00000022587) #22	DNAJC16 (ENSLLEG00000022657) #23	CASP9 (ENSLLEG00000022781) #24	ENSLLEG00000022852	ENSLLEG00000022907 #25	ENSLLEG00000023247 #25	TMEM147 (ENSLLEG00000023381)	ATP4A (ENSLLEG00000023584)	ENSLLEG00000025428	ENSLLEG00000025492	ENSLLEG00000025675	ENSLLEG00000025712	ENSLLEG00000025841	KMT2B (ENSLLEG00000026009)	U2AF1L4 (ENSLLEG00000026626)	ENSLLEG00000026799
Coelacanth	MODERN SPECIES	252						OTUD3 (ENSLACG00000018617)	UBXN10 (ENSLACG00000018613)	ddx19b (ENSLACG00000018608)	VWA5B1 (ENSLACG00000018558)	CAMK2N1 (ENSLACG00000018467)	MUL1 (ENSLACG00000018453)	FAM43B (ENSLACG00000018434)	ENSLACG00000018368	ENSLACG00000018329	CDA (ENSLACG00000022185)	AGMAT (ENSLACG00000018305) #22	DNAJC16 (ENSLACG00000018275) #23	CASP9 (ENSLACG00000018259) #24	ENSLACG00000018236 #25	ela3l (ENSLACG00000018193) ##25	ENSLACG00000018183 #25	PPIH (ENSLACG00000018153)	YBX1 (ENSLACG00000018135)	ENSLACG00000018111	CLDN19 (ENSLACG00000018062)	KIF17 (ENSLACG00000017977)	SH2D5 (ENSLACG00000017939)	HP1BP3 (ENSLACG00000017868)	EIF4G3 (ENSLACG00000017636)	ENSLACG00000017443	ECE1 (ENSLACG00000017425)
Actinopterygii	ANCESTRAL SPECIES	227				ENSGT00390000012939	ENSGT00940000154417.c	ENSGT00970000193437	ENSGT01080000257981	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B	ENSGT01050000244971.A	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000156670	ENSGT00390000004581	ENSGT00940000156015
Reedfish	MODERN SPECIES	16	trim62.1 (ENSECRG00000007939)	svbp (ENSECRG00000007961)	wnt4 (ENSECRG00000007983)	CDC42 (ENSECRG00000008053)	ap5b1 (ENSECRG00000008069)	zgc:112255 (ENSECRG00000008083)	P3H1 (ENSECRG00000008098)	cldn19 (ENSECRG00000008120)	ENSECRG00000008139	EPHA8 (ENSECRG00000008414)	ENSECRG00000009285	ENSECRG00000009309	b3galt6 (ENSECRG00000009337)	sdf4 (ENSECRG00000009351)	pink1 (ENSECRG00000009371)	agmat (ENSECRG00000009385) #22	DNAJC16 (ENSECRG00000009396) #23	casp9 (ENSECRG00000009432) #24	HSPG2 (ENSECRG00000009522)	USP48 (ENSECRG00000009784)	ENSECRG00000009808	gapdh (ENSECRG00000009820)	tmem269 (ENSECRG00000009833)	c1qtnf12 (ENSECRG00000009868)	cptp (ENSECRG00000009886)	ints11 (ENSECRG00000009949)	ENSECRG00000010110	PUSL1 (ENSECRG00000010119)	acap3b (ENSECRG00000010173)	ube2j2 (ENSECRG00000010231)	taf10 (ENSECRG00000010249)
Neopterygii	ANCESTRAL SPECIES	148	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000154417.c	ENSGT01080000257981	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT00940000156670	ENSGT00390000004581	ENSGT00940000156015	ENSGT00390000008152.A	ENSGT01010000222933	ENSGT00940000154169.B
Spotted gar	MODERN SPECIES	664	ube2j2 (ENSLOCG00000002308)	acap3b (ENSLOCG00000002244)	PUSL1 (ENSLOCG00000002210)	ENSLOCG00000018081	ints11 (ENSLOCG00000002177)	cptp (ENSLOCG00000002163)	ubxn10 (ENSLOCG00000002149)	ddx19a (ENSLOCG00000002118)	VWA5B1 (ENSLOCG00000002077)	mul1b (ENSLOCG00000002052)	fam43b (ENSLOCG00000018080)	ENSLOCG00000002018	ENSLOCG00000001987	cdab (ENSLOCG00000001971)	pink1 (ENSLOCG00000001952)	agmat (ENSLOCG00000001924) #22	DNAJC16 (ENSLOCG00000001888) #23	casp9 (ENSLOCG00000001860) #24	HSPG2 (ENSLOCG00000001778)	LDLRAD2 (ENSLOCG00000001757)	USP48 (ENSLOCG00000001685)	ENSLOCG00000001674	tmem269 (ENSLOCG00000001653)	PRDM2 (ENSLOCG00000001614) #32	FOXJ3 (ENSLOCG00000001575)	rimkla (ENSLOCG00000001562)	ZMYND12 (ENSLOCG00000001538)	ppcs (ENSLOCG00000001524)	ENSLOCG00000001488	utp3 (ENSLOCG00000001449)	ENSLOCG00000001433
Osteoglossocephalai	ANCESTRAL SPECIES	34	ENSGT00940000165549	ENSGT00390000012939	ENSGT01060000249781	ENSGT00940000154417.c	ENSGT01080000257981	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00940000159698 #24	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i
Clupeocephala	ANCESTRAL SPECIES	41	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT01060000249781	ENSGT00940000154417.c	ENSGT00990000208651	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00940000159698 #24	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000164219	ENSGT00940000161381	ENSGT00940000154967.a.a.b	ENSGT00940000161110.a.a	ENSGT00940000163310.k.a	ENSGT00390000008414.h
Euteleosteomorpha	ANCESTRAL SPECIES	2	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT01060000249781	ENSGT00940000154417.c	ENSGT00990000208651	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00940000159698 #24	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000155549.a.a.b	ENSGT00940000162307	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Acanthomorphata	ANCESTRAL SPECIES	3	ENSGT00940000156199.a.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT01060000249781	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00940000159698 #24	ENSGT00940000156670	ENSGT00390000008152.A	ENSGT00940000155610.o.a	ENSGT01010000222933	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000163310.k.a	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a
Cod	MODERN SPECIES		ACAP3 (ENSGMOG00000006685)	ENSGMOG00000020234	ints11 (ENSGMOG00000006721)	cptp (ENSGMOG00000006741)	ubxn10 (ENSGMOG00000006749)	ENSGMOG00000030173	ddx19a (ENSGMOG00000006760)	VWA5B1 (ENSGMOG00000006768)	mul1b (ENSGMOG00000006807)	ENSGMOG00000036072	fam43b (ENSGMOG00000006813)	ENSGMOG00000025197	ENSGMOG00000015456	ENSGMOG00000015468	pink1 (ENSGMOG00000015483)	agmat (ENSGMOG00000030462) #22	ENSGMOG00000016743 #23	CASP9 (ENSGMOG00000016718) #24	ENSGMOG00000011630	tmem269 (ENSGMOG00000011623)	ENSGMOG00000003699	ENSGMOG00000018508	phlda3 (ENSGMOG00000020342)	ENSGMOG00000010682	ENSGMOG00000010706	ENSGMOG00000010719	ENSGMOG00000010731	ENSGMOG00000010743	ENSGMOG00000020561	ENSGMOG00000010870	ube2t (ENSGMOG00000010895)
Euacanthomorphacea	ANCESTRAL SPECIES	2	ENSGT00940000155356.c	ENSGT00940000156199.a.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00940000159698 #24	ENSGT00940000156670	ENSGT01010000222933	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000163310.k.a	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b
Pinecone sodierfish	MODERN SPECIES	21	ints11 (ENSMMDG00005005285)	ENSMMDG00005005276	ACAP3 (ENSMMDG00005005267)	HIPK1 (ENSMMDG00005004483)	cdaa (ENSMMDG00005004155)	cdaa (ENSMMDG00005004090)	ENSMMDG00005004069	ENSMMDG00005015695	ENSMMDG00005015687	fam43b (ENSMMDG00005015686)	mul1b (ENSMMDG00005015683)	VWA5B1 (ENSMMDG00005015672)	ENSMMDG00005015657	ddx19a (ENSMMDG00005014854)	pink1 (ENSMMDG00005014834)	agmat (ENSMMDG00005014826) #22	DNAJC16 (ENSMMDG00005014037) #23	casp9 (ENSMMDG00005014019) #24	HSPG2 (ENSMMDG00005014007)	ENSMMDG00005014004	tmem269 (ENSMMDG00005014001)	ENSMMDG00005014000	ENSMMDG00005013998	RSBN1 (ENSMMDG00005013996)	ENSMMDG00005013994	ENSMMDG00005013993	ENSMMDG00005013935	ENSMMDG00005013933	ENSMMDG00005013932	ENSMMDG00005013930	ENSMMDG00005013929
Percomorphaceae	ANCESTRAL SPECIES	7	ENSGT00940000155356.c	ENSGT00940000156199.a.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT01010000222933	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000163310.k.a	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	643																ENSHCOG00000010141 #22
Tiger tail seahorse	MODERN SPECIES	47																ENSHCOG00000020329 #22
Tiger tail seahorse	MODERN SPECIES	261					FBLN2 (ENSHCOG00000007449)	WNT7A (ENSHCOG00000007463)	zgc:171857 (ENSHCOG00000007486)	ENSHCOG00000007516	BICD2 (ENSHCOG00000007546)	ENSHCOG00000007559	NUP210 (ENSHCOG00000007802)	mul1b (ENSHCOG00000007824)	ENSHCOG00000007832	fam43b (ENSHCOG00000007837)	ENSHCOG00000007840	agmat (ENSHCOG00000007845) #22	HSPG2 (ENSHCOG00000007952)	tmem269 (ENSHCOG00000007976)	KYNU (ENSHCOG00000008024)	ENSHCOG00000008045	ENSHCOG00000008091	ENSHCOG00000008098	bzw1a (ENSHCOG00000008122)	AOX1 (ENSHCOG00000008197)	arl4cb (ENSHCOG00000008233)	sh3bp4a (ENSHCOG00000008245)	ENSHCOG00000008248	ahr1b (ENSHCOG00000008459)	ENSHCOG00000008499	mfsd6a (ENSHCOG00000008521)	nab1a (ENSHCOG00000008544)
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT01010000222933	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000164219	ENSGT00940000161381	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00940000154967.a.a.b.k.a	ENSGT00990000203827	ENSGT00940000164219	ENSGT00940000161381	ENSGT00940000154967.a.a.b.k.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023
Aplocheiloidei	ANCESTRAL SPECIES	41	ENSGT00940000156199.a.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00940000154457.a.a.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00940000154967.a.a.b.k.a	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a
Mangrove rivulus	DUPLICATION
Mangrove rivulus	MODERN SPECIES	46	ACAP3 (ENSKMAG00000003151)	ints11 (ENSKMAG00000003315)	ENSKMAG00000003411	cptp (ENSKMAG00000003437)	ubxn10 (ENSKMAG00000003452)	ddx19a (ENSKMAG00000003496)	VWA5B1 (ENSKMAG00000003737)	mul1b (ENSKMAG00000003815)	fam43b (ENSKMAG00000003828)	ENSKMAG00000003840	ENSKMAG00000003858	ENSKMAG00000003878	pink1 (ENSKMAG00000003918)	tuba1c (ENSKMAG00000003930)	agmat (ENSKMAG00000003947) #22	agmat (ENSKMAG00000003979) #22	HSPG2 (ENSKMAG00000004041)	tmem269 (ENSKMAG00000004524)	ENSKMAG00000004558	MAGI3 (ENSKMAG00000004614)	RSBN1 (ENSKMAG00000004762)	ptpn22 (ENSKMAG00000004779)	ENSKMAG00000004820	ENSKMAG00000004856	rca2.1 (ENSKMAG00000004933)	ENSKMAG00000004976	PLXNA2 (ENSKMAG00000005014)	ENSKMAG00000005135	slc48a1a (ENSKMAG00000005152)	RAPGEF3 (ENSKMAG00000005181)	itga5 (ENSKMAG00000005252)
Mangrove rivulus	MODERN SPECIES	46	HIPK1 (ENSKMAG00000003058)	ACAP3 (ENSKMAG00000003151)	ints11 (ENSKMAG00000003315)	ENSKMAG00000003411	cptp (ENSKMAG00000003437)	ubxn10 (ENSKMAG00000003452)	ddx19a (ENSKMAG00000003496)	VWA5B1 (ENSKMAG00000003737)	mul1b (ENSKMAG00000003815)	fam43b (ENSKMAG00000003828)	ENSKMAG00000003840	ENSKMAG00000003858	ENSKMAG00000003878	pink1 (ENSKMAG00000003918)	tuba1c (ENSKMAG00000003930)	agmat (ENSKMAG00000003947) #22	agmat (ENSKMAG00000003979) #22	HSPG2 (ENSKMAG00000004041)	tmem269 (ENSKMAG00000004524)	ENSKMAG00000004558	MAGI3 (ENSKMAG00000004614)	RSBN1 (ENSKMAG00000004762)	ptpn22 (ENSKMAG00000004779)	ENSKMAG00000004820	ENSKMAG00000004856	rca2.1 (ENSKMAG00000004933)	ENSKMAG00000004976	PLXNA2 (ENSKMAG00000005014)	ENSKMAG00000005135	slc48a1a (ENSKMAG00000005152)	RAPGEF3 (ENSKMAG00000005181)
Turquoise killifish	MODERN SPECIES	1624	fcho2 (ENSNFUG00015005321)	TNPO1 (ENSNFUG00015006172)	ENSNFUG00015006294	CPSF3L (ENSNFUG00015006339)	GLTPD1 (ENSNFUG00015006808)	ddx19a (ENSNFUG00015006814)	ENSNFUG00015006826	VWA5B1 (ENSNFUG00015006831)	MUL1B (ENSNFUG00015006834)	ENSNFUG00015006837	fam43b (ENSNFUG00015006840)	ENSNFUG00015006842	ENSNFUG00015006847	PINK1 (ENSNFUG00015006854)	ENSNFUG00015006860	AGMAT (ENSNFUG00015006872) #22	ENSNFUG00015007490	tmem269 (ENSNFUG00015007493)	MAGI3 (ENSNFUG00015007511)	RSBN1 (ENSNFUG00015007522)	ENSNFUG00015007527	ENSNFUG00015007538	Nfu_g_1_001907 (ENSNFUG00015007558)	CD55 (ENSNFUG00015007578)	Nfu_g_1_001977 (ENSNFUG00015007582)	PLXNA2 (ENSNFUG00015007792)	ENSNFUG00015010754	ENSNFUG00015010757	SLC48A1A (ENSNFUG00015010763)	RAPGEF3 (ENSNFUG00015010854)	ITGA5 (ENSNFUG00015011734)
Cyprinodontoidei	ANCESTRAL SPECIES	3	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000164219	ENSGT00940000161381	ENSGT00990000203957	ENSGT00940000154967.a.a.b.k.a	ENSGT00940000154967.a.a.b.k.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT00390000002307.e
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938.h	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000164219	ENSGT00940000161381	ENSGT00990000203957	ENSGT00940000154967.a.a.b.k.a.a	ENSGT00940000154967.a.a.b.k.a.b	ENSGT00940000154967.a.a.b.k.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023
Poecilia	ANCESTRAL SPECIES	14	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938.h	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000164219	ENSGT00940000161381	ENSGT00990000203957	ENSGT00940000154967.a.a.b.k.a.a	ENSGT00940000154967.a.a.b.k.a.b	ENSGT00940000154967.a.a.b.k.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023
NAME_6	ANCESTRAL SPECIES	237	ENSGT00940000156199.a.b	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549.f	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938.h	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B
Sailfin molly	MODERN SPECIES	423		ints11 (ENSPLAG00000019195)	ENSPLAG00000019144	cptp (ENSPLAG00000019124)	ubxn10 (ENSPLAG00000019115)	ddx19a (ENSPLAG00000019100)	ENSPLAG00000019055	VWA5B1 (ENSPLAG00000019038)	mul1b (ENSPLAG00000018981)	fam43b (ENSPLAG00000018969)	ENSPLAG00000018964	ENSPLAG00000018913	ENSPLAG00000017195	pink1 (ENSPLAG00000017068)	ENSPLAG00000017062	agmat (ENSPLAG00000017041) #22	HSPG2 (ENSPLAG00000017011)	tmem269 (ENSPLAG00000016903)
Amazon molly	MODERN SPECIES	750						cptp (ENSPFOG00000023563)	ubxn10 (ENSPFOG00000020277)	ddx19a (ENSPFOG00000007233)	VWA5B1 (ENSPFOG00000007356)	mul1b (ENSPFOG00000007566)	fam43b (ENSPFOG00000007634)	ENSPFOG00000007653	ENSPFOG00000007779	pink1 (ENSPFOG00000007920)	ENSPFOG00000008025	agmat (ENSPFOG00000008058) #22	HSPG2 (ENSPFOG00000008140)	tmem269 (ENSPFOG00000008706)
Guppy	MODERN SPECIES	459	ENSPREG00000021496	ENSPREG00000021499	ints11 (ENSPREG00000021516)	cptp (ENSPREG00000021546)	ubxn10 (ENSPREG00000021549)	ddx19a (ENSPREG00000021557)	ENSPREG00000021566	ENSPREG00000021576	mul1b (ENSPREG00000021587)	fam43b (ENSPREG00000021591)	ENSPREG00000021601	ENSPREG00000021822	ENSPREG00000022276	pink1 (ENSPREG00000022279)	ENSPREG00000022285	agmat (ENSPREG00000022292) #22	HSPG2 (ENSPREG00000022327)	tmem269 (ENSPREG00000022374)	MAGI3 (ENSPREG00000022382)	ENSPREG00000022404	ENSPREG00000022409	ENSPREG00000022411	ENSPREG00000022418	ENSPREG00000022431	ENSPREG00000022440	ENSPREG00000022448	PLXNA2 (ENSPREG00000022454)	slc48a1a (ENSPREG00000022467)	RAPGEF3 (ENSPREG00000022473)	itga5 (ENSPREG00000022500)	CSRNP2 (ENSPREG00000022508)
Platyfish	MODERN SPECIES		ENSXMAG00000026940	ENSXMAG00000012471	ints11 (ENSXMAG00000012456)	cptp (ENSXMAG00000012455)	ubxn10 (ENSXMAG00000027375)	ENSXMAG00000022729	ddx19a (ENSXMAG00000012440)	VWA5B1 (ENSXMAG00000012428)	mul1b (ENSXMAG00000012421)	ENSXMAG00000022596	fam43b (ENSXMAG00000019790)	ENSXMAG00000012410	ENSXMAG00000027225	pink1 (ENSXMAG00000012373)	ENSXMAG00000027485	agmat (ENSXMAG00000012356) #22	ENSXMAG00000028421	HSPG2 (ENSXMAG00000012335)	tmem269 (ENSXMAG00000024776)	MAGI3 (ENSXMAG00000021151)	RSBN1 (ENSXMAG00000012327)	ENSXMAG00000026345	ENSXMAG00000027751	ENSXMAG00000024774	ENSXMAG00000022749	ENSXMAG00000007199	ENSXMAG00000028240	ENSXMAG00000024169	PLXNA2 (ENSXMAG00000012159)	slc48a1a (ENSXMAG00000025011)	RAPGEF3 (ENSXMAG00000012088)
NAME_4	ANCESTRAL SPECIES	21		ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00940000154967.a.a.b.k.a	ENSGT00940000154967.a.a.b.k.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106
Mummichog	MODERN SPECIES	2349			ENSFHEG00000007879	ENSFHEG00000007871	ints11 (ENSFHEG00000007863)	cptp (ENSFHEG00000000201)	ddx19a (ENSFHEG00000007798)	ubxn10 (ENSFHEG00000007633)	ENSFHEG00000007627	VWA5B1 (ENSFHEG00000007620)	fam43b (ENSFHEG00000007566)	ENSFHEG00000007549	ENSFHEG00000007408	pink1 (ENSFHEG00000007401)	ENSFHEG00000007393	agmat (ENSFHEG00000007361) #22	HSPG2 (ENSFHEG00000007346)	tmem269 (ENSFHEG00000007105)	MAGI3 (ENSFHEG00000007081)	RSBN1 (ENSFHEG00000007043)	ENSFHEG00000007027	ENSFHEG00000006998	ENSFHEG00000006987	ENSFHEG00000006983	ENSFHEG00000006968	ENSFHEG00000006951	PLXNA2 (ENSFHEG00000006941)	slc48a1a (ENSFHEG00000006876)	RAPGEF3 (ENSFHEG00000006857)	itga5 (ENSFHEG00000006824)	CSRNP2 (ENSFHEG00000006794)
Sheepshead minnow	MODERN SPECIES	128	ENSCVAG00000012937	rbms2b (ENSCVAG00000013006)	ENSCVAG00000013019	LRP1 (ENSCVAG00000013209)	fmnl3 (ENSCVAG00000013561)	ESYT1 (ENSCVAG00000013654)	pa2g4b (ENSCVAG00000013702)	erbb3b (ENSCVAG00000013738)	ARF3 (ENSCVAG00000013760)	wnt10b (ENSCVAG00000013796)	wnt1 (ENSCVAG00000013826)	ikzf4 (ENSCVAG00000000935)	DNAJC22 (ENSCVAG00000014020)	si:ch211-255g12.6 (ENSCVAG00000014031)	porcn (ENSCVAG00000014058)	agmat (ENSCVAG00000014067) #22	HSPG2 (ENSCVAG00000000363)	tmem269 (ENSCVAG00000014339)	MAGI3 (ENSCVAG00000014371)	RSBN1 (ENSCVAG00000014386)	ptpn22 (ENSCVAG00000014423)	ENSCVAG00000014502	ENSCVAG00000014547	ENSCVAG00000014551	PLXNA2 (ENSCVAG00000014649)	slc48a1a (ENSCVAG00000014666)	RAPGEF3 (ENSCVAG00000014686)	itga5 (ENSCVAG00000014704)	CSRNP2 (ENSCVAG00000014722)	TFCP2 (ENSCVAG00000014822)	pou6f1 (ENSCVAG00000000378)
Oryzias	ANCESTRAL SPECIES	4			ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106
Oryzias_b	ANCESTRAL SPECIES	2	ENSGT01010000222360.B	ENSGT00940000155356.c	ENSGT00940000156199.a.b	ENSGT00940000165549	ENSGT00940000157644	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b	ENSGT00390000012141.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629
Javanese ricefish	MODERN SPECIES	21	ints11 (ENSOJAG00000011829)	ENSOJAG00000011799	ENSOJAG00000011771	ddx19a (ENSOJAG00000011756)	VWA5B1 (ENSOJAG00000011738)	ENSOJAG00000011719	ENSOJAG00000011707	fam43b (ENSOJAG00000011675)	ENSOJAG00000011653	ENSOJAG00000011639	ENSOJAG00000011633	ENSOJAG00000011623	ENSOJAG00000011618	pink1 (ENSOJAG00000011591)	ENSOJAG00000011526	agmat (ENSOJAG00000011515) #22	tmem269 (ENSOJAG00000009212)	MAGI3 (ENSOJAG00000009089)	RSBN1 (ENSOJAG00000009049)	ptpn22 (ENSOJAG00000008996)	ENSOJAG00000008981	ENSOJAG00000008961	ENSOJAG00000008948	rca2.1 (ENSOJAG00000008817)	mul1b (ENSOJAG00000008781)	ENSOJAG00000008761	PLXNA2 (ENSOJAG00000003914)	slc48a1a (ENSOJAG00000003165)	RAPGEF3 (ENSOJAG00000002764)	itga5 (ENSOJAG00000002281)	CSRNP2 (ENSOJAG00000002209)
Indian medaka	MODERN SPECIES	23	sdf4 (ENSOMEG00000017885)	HIPK1 (ENSOMEG00000017914)	ACAP3 (ENSOMEG00000018052)	cptp (ENSOMEG00000018086)	ENSOMEG00000018099	ints11 (ENSOMEG00000018159)	ENSOMEG00000018189	ddx19a (ENSOMEG00000018230)	VWA5B1 (ENSOMEG00000018264)	fam43b (ENSOMEG00000018278)	ENSOMEG00000018291	ENSOMEG00000018309	ENSOMEG00000018314	pink1 (ENSOMEG00000018348)	ENSOMEG00000018370	agmat (ENSOMEG00000018397) #22	HSPG2 (ENSOMEG00000018627)	tmem269 (ENSOMEG00000018680)	MAGI3 (ENSOMEG00000018795)	RSBN1 (ENSOMEG00000018827)	chrnd (ENSOMEG00000018863)	ENSOMEG00000018949	ENSOMEG00000018980	rps6ka3b (ENSOMEG00000019141)	pdha1b (ENSOMEG00000019268)	acot9.2 (ENSOMEG00000019355)	sat1b (ENSOMEG00000019425)	apoob (ENSOMEG00000019455)	klhl15 (ENSOMEG00000019521)	eif2s3 (ENSOMEG00000019582)	ENSOMEG00000019633
Oryzias_a	ANCESTRAL SPECIES		ENSGT00940000159728	ENSGT00940000165811	ENSGT00940000166581	ENSGT00940000165935	ENSGT00950000183003.a.b	ENSGT00510000046843.a.b	ENSGT00940000153668.A	ENSGT00940000158981	ENSGT00940000158631	ENSGT00940000157665.a	ENSGT00940000158083.a	ENSGT01010000222360.B	ENSGT00940000155356.c	ENSGT00940000156199.a.b	ENSGT00940000154457.a.a.b	ENSGT00950000183195.a #22	ENSGT00390000001206	ENSGT01050000244971.A.d.a.b	ENSGT01050000244971.B.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT00390000012141.b	ENSGT00940000158938	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b
Chinese medaka	MODERN SPECIES	103	ENSOSIG00000020725	ENSOSIG00000020716	cd40 (ENSOSIG00000020709)	irx7 (ENSOSIG00000020707)	ENSOSIG00000020705	PLEKHG5 (ENSOSIG00000020701)	NOL9 (ENSOSIG00000020695)	ZBTB48 (ENSOSIG00000020694)	klhl21 (ENSOSIG00000020693)	SYT6 (ENSOSIG00000020692)	c1qtnf12 (ENSOSIG00000020691)	sdf4 (ENSOSIG00000020690)	HIPK1 (ENSOSIG00000020675)	ACAP3 (ENSOSIG00000016143)	TUBA4B (ENSOSIG00000016069)	agmat (ENSOSIG00000016066) #22	pink1 (ENSOSIG00000016064)	ENSOSIG00000016061	ENSOSIG00000016060	fam43b (ENSOSIG00000016058)	ENSOSIG00000016057	mul1b (ENSOSIG00000016056)	VWA5B1 (ENSOSIG00000016055)	ENSOSIG00000016054	ints11 (ENSOSIG00000016051)	cptp (ENSOSIG00000016047)	ENSOSIG00000016046	ddx19a (ENSOSIG00000016045)	ENSOSIG00000016041	tmem269 (ENSOSIG00000015972)	ENSOSIG00000015971
Japanese Medaka HdrR	MODERN SPECIES	21	irx7 (ENSORLG00000030275)	ENSORLG00000027296	PLEKHG5 (ENSORLG00000019281)	NOL9 (ENSORLG00000025184)	ZBTB48 (ENSORLG00000019331)	klhl21 (ENSORLG00000019357)	ENSORLG00000029457	SYT6 (ENSORLG00000016069)	olfml3a (ENSORLG00000016063)	ENSORLG00000028075	c1qtnf12 (ENSORLG00000016058)	sdf4 (ENSORLG00000016056)	ENSORLG00000016039	ENSORLG00000016028	ENSORLG00000016016	agmat (ENSORLG00000016013) #22	pink1 (ENSORLG00000016007)	ENSORLG00000016000	ENSORLG00000028395	fam43b (ENSORLG00000015977)	ENSORLG00000022013	mul1b (ENSORLG00000023666)	VWA5B1 (ENSORLG00000015968)	ENSORLG00000015962	ints11 (ENSORLG00000015957)	cptp (ENSORLG00000015937)	ENSORLG00000029225	ddx19a (ENSORLG00000015931)	ENSORLG00000027246	ENSORLG00000022816	HSPG2 (ENSORLG00000015904)
Ovalentaria_B	ANCESTRAL SPECIES	2	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00990000203827	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e
Cichlidae	ANCESTRAL SPECIES		ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	5	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b.n	ENSGT00990000203827	ENSGT00940000154967.a.a.b.m	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	18	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000154967.a.a.b.m	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a
Haplochromini	ANCESTRAL SPECIES	20	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00390000012939	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000154967.a.a.b.m.b.a	ENSGT00940000163310.k.a	ENSGT00940000154967.a.a.b.m.a	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Burton s mouthbrooder	MODERN SPECIES	295	ACAP3 (ENSHBUG00000006921)	ENSHBUG00000006862	ENSHBUG00000006843	ints11 (ENSHBUG00000006820)	cptp (ENSHBUG00000006792)	ddx19a (ENSHBUG00000006785)	ubxn10 (ENSHBUG00000006763)	VWA5B1 (ENSHBUG00000000167)	mul1b (ENSHBUG00000006738)	fam43b (ENSHBUG00000006722)	ENSHBUG00000006702	ENSHBUG00000006690	ENSHBUG00000006679	pink1 (ENSHBUG00000006671)	TUBA1C (ENSHBUG00000006666)	agmat (ENSHBUG00000006637) #22	HSPG2 (ENSHBUG00000006586)	tmem269 (ENSHBUG00000006387)	ENSHBUG00000006361	ENSHBUG00000006329	RSBN1 (ENSHBUG00000006211)	ptpn22 (ENSHBUG00000006194)	ENSHBUG00000000152	ENSHBUG00000006156	ENSHBUG00000006130	ENSHBUG00000006029	PLXNA2 (ENSHBUG00000006009)	SLC26A9 (ENSHBUG00000005948)	slc48a1a (ENSHBUG00000005886)	RAPGEF3 (ENSHBUG00000005863)	itga5 (ENSHBUG00000005822)
Haplochromini_A	ANCESTRAL SPECIES	17	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000154967.a.a.b.m.b.a	ENSGT00940000163310.k.a	ENSGT00940000154967.a.a.b.m.a	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
P. nyererei	MODERN SPECIES	401	ENSPNYG00000021292	ENSPNYG00000021281	cptp (ENSPNYG00000021273)	ints11 (ENSPNYG00000021238)	ubxn10 (ENSPNYG00000021216)	ENSPNYG00000021190	ddx19a (ENSPNYG00000021160)	VWA5B1 (ENSPNYG00000021106)	mul1b (ENSPNYG00000021079)	ENSPNYG00000021069	fam43b (ENSPNYG00000021058)	ENSPNYG00000020577	ENSPNYG00000020469	pink1 (ENSPNYG00000020461)	tuba2 (ENSPNYG00000020451)	agmat (ENSPNYG00000020421) #22	ENSPNYG00000020188	HSPG2 (ENSPNYG00000019971)	tmem269 (ENSPNYG00000019932)
Haplochromini_B	ANCESTRAL SPECIES	14	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00390000012939	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000164472.a.b.a.b.a.a.a.b.a.b.a.a.a.b.a.b	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000154967.a.a.b.m.b.a	ENSGT00940000154967.a.a.b.m.a	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Zebra mbuna	MODERN SPECIES	1103	ENSMZEG00005023360	ENSMZEG00005023358	ints11 (ENSMZEG00005023352)	cptp (ENSMZEG00005023351)	ubxn10 (ENSMZEG00005023350)	ENSMZEG00005023348	ddx19a (ENSMZEG00005023347)	VWA5B1 (ENSMZEG00005023343)	mul1b (ENSMZEG00005023342)	ENSMZEG00005023341	fam43b (ENSMZEG00005023340)	ENSMZEG00005022320	ENSMZEG00005022312	pink1 (ENSMZEG00005022310)	ENSMZEG00005022306	agmat (ENSMZEG00005022303) #22	ENSMZEG00005022300	ENSMZEG00005022297	ENSMZEG00005022292	tmem269 (ENSMZEG00005022285)	ENSMZEG00005022281	ENSMZEG00005022276	ENSMZEG00005022272	ptpn22 (ENSMZEG00005022265)	ENSMZEG00005022262	ENSMZEG00005022258	ENSMZEG00005022254	ENSMZEG00005022246	ENSMZEG00005022244	ENSMZEG00005022241	USP19 (ENSMZEG00005022159)
Eastern happy	MODERN SPECIES	12	ENSACLG00000018732	ENSACLG00000018758	ints11 (ENSACLG00000018782)	cptp (ENSACLG00000018875)	ddx19a (ENSACLG00000018912)	ubxn10 (ENSACLG00000018960)	VWA5B1 (ENSACLG00000018969)	ENSACLG00000018999	mul1b (ENSACLG00000019015)	ENSACLG00000019022	fam43b (ENSACLG00000019029)	ENSACLG00000019066	ENSACLG00000019676	pink1 (ENSACLG00000019688)	ENSACLG00000019718	agmat (ENSACLG00000020177) #22	HSPG2 (ENSACLG00000020266)	ENSACLG00000022089	tmem269 (ENSACLG00000022135)	ENSACLG00000022160	ENSACLG00000022207	RSBN1 (ENSACLG00000022254)	ptpn22 (ENSACLG00000022398)	ENSACLG00000022445	ENSACLG00000022488	ENSACLG00000022527	PLXNA2 (ENSACLG00000022581)	ENSACLG00000022675	PAK6 (ENSACLG00000022687)	SLC26A9 (ENSACLG00000022727)	slc48a1a (ENSACLG00000022768)
Lyretail cichlid	MODERN SPECIES	321	ACAP3 (ENSNBRG00000002435)	ENSNBRG00000002529	ENSNBRG00000002549	ints11 (ENSNBRG00000002564)	cptp (ENSNBRG00000002616)	ubxn10 (ENSNBRG00000002633)	ddx19a (ENSNBRG00000002655)	VWA5B1 (ENSNBRG00000002766)	mul1b (ENSNBRG00000002819)	ENSNBRG00000002841	fam43b (ENSNBRG00000002864)	ENSNBRG00000002927	ENSNBRG00000003410	pink1 (ENSNBRG00000004041)	TUBA1C (ENSNBRG00000004072)	agmat (ENSNBRG00000004099) #22	HSPG2 (ENSNBRG00000004145)	tmem269 (ENSNBRG00000004336)	ENSNBRG00000004353	ENSNBRG00000004387	ENSNBRG00000004415	ENSNBRG00000004441	ENSNBRG00000004479	ENSNBRG00000004497	ENSNBRG00000004522	ENSNBRG00000004545	PLXNA2 (ENSNBRG00000004564)	SLC26A9 (ENSNBRG00000004670)	slc48a1a (ENSNBRG00000004737)	RAPGEF3 (ENSNBRG00000004769)	itga5 (ENSNBRG00000004952)
Nile tilapia	MODERN SPECIES	12	ENSONIG00000021136	ints11 (ENSONIG00000016600)	cptp (ENSONIG00000034471)	ubxn10 (ENSONIG00000016605)	ddx19a (ENSONIG00000016602)	ENSONIG00000029292	VWA5B1 (ENSONIG00000016606)	mul1b (ENSONIG00000016609)	fam43b (ENSONIG00000016610)	ENSONIG00000028570	ENSONIG00000027184	ENSONIG00000016616	pink1 (ENSONIG00000016617)	tuba4l (ENSONIG00000020575)	ENSONIG00000014870	agmat (ENSONIG00000016620) #22	HSPG2 (ENSONIG00000016621)	tmem269 (ENSONIG00000016626)	ENSONIG00000037895	tmem269 (ENSONIG00000035267)	MAGI3 (ENSONIG00000016631)	ENSONIG00000016636	ptpn22 (ENSONIG00000016638)	ENSONIG00000034489	ENSONIG00000041342	ENSONIG00000016642	ENSONIG00000029443	PLXNA2 (ENSONIG00000016645)	SLC26A9 (ENSONIG00000016651)	slc48a1 (ENSONIG00000032657)	RAPGEF3 (ENSONIG00000016658)
Midas cichlid	MODERN SPECIES	531	ENSACIG00000016768	ENSACIG00000016757	ints11 (ENSACIG00000016715)	cptp (ENSACIG00000016706)	ubxn10 (ENSACIG00000016698)	ENSACIG00000016687	ddx19a (ENSACIG00000016665)	VWA5B1 (ENSACIG00000016625)	mul1b (ENSACIG00000016615)	ENSACIG00000016605	fam43b (ENSACIG00000016593)	ENSACIG00000015812	ENSACIG00000015051	pink1 (ENSACIG00000014971)	ENSACIG00000014957	agmat (ENSACIG00000014905) #22	HSPG2 (ENSACIG00000014726)	tmem269 (ENSACIG00000014693)	MAGI3 (ENSACIG00000014645)	RSBN1 (ENSACIG00000014588)	ENSACIG00000014569	ENSACIG00000014553	ENSACIG00000014540	PLXNA2 (ENSACIG00000014487)	SLC26A9 (ENSACIG00000014452)	slc48a1a (ENSACIG00000014443)	RAPGEF3 (ENSACIG00000014352)	itga5 (ENSACIG00000014031)	CSRNP2 (ENSACIG00000014006)	TFCP2 (ENSACIG00000013961)	pou6f1 (ENSACIG00000013927)
Pomacentridae	ANCESTRAL SPECIES	2	ENSGT00940000156199.a.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a
Pomacentridae_A	ANCESTRAL SPECIES	24	ENSGT00940000156199.a.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a
Amphiprion	ANCESTRAL SPECIES	15	ENSGT00940000155356.d.b.a.a.a.a.a.b.c	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b.l	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000164472.a.b.c.a.b	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a.e	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a
Clown anemonefish	MODERN SPECIES	3464	ENSAOCG00000021221	ENSAOCG00000021191	ints11 (ENSAOCG00000021172)	cptp (ENSAOCG00000021096)	ubxn10 (ENSAOCG00000021087)	ddx19a (ENSAOCG00000021067)	ENSAOCG00000021003	VWA5B1 (ENSAOCG00000020981)	mul1b (ENSAOCG00000020899)	ENSAOCG00000001541	fam43b (ENSAOCG00000020851)	ENSAOCG00000020835	ENSAOCG00000020805	pink1 (ENSAOCG00000020731)	ENSAOCG00000020721	agmat (ENSAOCG00000020693) #22	HSPG2 (ENSAOCG00000020539)	ENSAOCG00000019059	ENSAOCG00000019014
Orange clownfish	MODERN SPECIES	22	ENSAPEG00000024752	ENSAPEG00000024743	ints11 (ENSAPEG00000024732)	cptp (ENSAPEG00000024726)	ubxn10 (ENSAPEG00000024720)	ENSAPEG00000024716	ddx19a (ENSAPEG00000024709)	VWA5B1 (ENSAPEG00000024700)	mul1b (ENSAPEG00000024695)	ENSAPEG00000024692	fam43b (ENSAPEG00000024690)	ENSAPEG00000024677	ENSAPEG00000024658	pink1 (ENSAPEG00000024649)	ENSAPEG00000024646	agmat (ENSAPEG00000024642) #22	HSPG2 (ENSAPEG00000024424)	ENSAPEG00000024320	ENSAPEG00000024245	tmem269 (ENSAPEG00000024219)	ENSAPEG00000024205	MAGI3 (ENSAPEG00000024174)	RSBN1 (ENSAPEG00000024143)	ptpn22 (ENSAPEG00000024128)	ENSAPEG00000024103	ENSAPEG00000024075	ENSAPEG00000024025	PLXNA2 (ENSAPEG00000023982)	SLC26A9 (ENSAPEG00000023910)	slc48a1a (ENSAPEG00000023890)	RAPGEF3 (ENSAPEG00000023838)
Spiny chromis	MODERN SPECIES	216	ENSAPOG00000022713	ENSAPOG00000022674	ints11 (ENSAPOG00000022656)	cptp (ENSAPOG00000022588)	ubxn10 (ENSAPOG00000022567)	ddx19a (ENSAPOG00000022551)	ENSAPOG00000022511	VWA5B1 (ENSAPOG00000022492)	mul1b (ENSAPOG00000022464)	ENSAPOG00000022438	fam43b (ENSAPOG00000022424)	ENSAPOG00000022412	ENSAPOG00000022317	pink1 (ENSAPOG00000000635)	TUBA1C (ENSAPOG00000022280)	agmat (ENSAPOG00000022261) #22	HSPG2 (ENSAPOG00000022235)	ENSAPOG00000022018	ENSAPOG00000021968	tmem269 (ENSAPOG00000021962)	ENSAPOG00000021942	MAGI3 (ENSAPOG00000021907)	ENSAPOG00000021800	ptpn22 (ENSAPOG00000021777)	ENSAPOG00000021726
Bicolor damselfish	MODERN SPECIES	256		ints11 (ENSSPAG00000018290)	ENSSPAG00000018347	cptp (ENSSPAG00000018365)	ubxn10 (ENSSPAG00000018372)	ddx19a (ENSSPAG00000018381)	ENSSPAG00000018399	VWA5B1 (ENSSPAG00000018416)	mul1b (ENSSPAG00000018454)	ENSSPAG00000018474	fam43b (ENSSPAG00000018483)	ENSSPAG00000018519	ENSSPAG00000018606	pink1 (ENSSPAG00000018617)	ENSSPAG00000018630	agmat (ENSSPAG00000018648) #22	HSPG2 (ENSSPAG00000018682)	ENSSPAG00000018843	tmem269 (ENSSPAG00000018860)	ENSSPAG00000018874	MAGI3 (ENSSPAG00000018898)	ENSSPAG00000018923	ENSSPAG00000018933	ENSSPAG00000018941	ENSSPAG00000018948	ENSSPAG00000019001	PLXNA2 (ENSSPAG00000019010)	ENSSPAG00000019076	SLC26A9 (ENSSPAG00000019087)	slc48a1a (ENSSPAG00000019127)	RAPGEF3 (ENSSPAG00000019135)
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT01010000222933	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00990000203827	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT01010000222933	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b
Carangaria	ANCESTRAL SPECIES	2	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT01010000222933	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Carangaria_A	ANCESTRAL SPECIES	1	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT01010000222933	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES		ENSLCAG00010024464	ENSLCAG00010024463	ints11 (ENSLCAG00010024442)	cptp (ENSLCAG00010024427)	ubxn10 (ENSLCAG00010024423)	ENSLCAG00010024416	ddx19a (ENSLCAG00010024412)	VWA5B1 (ENSLCAG00010024401)	mul1b (ENSLCAG00010024397)	ENSLCAG00010024395	fam43b (ENSLCAG00010024389)	ENSLCAG00010024387	ENSLCAG00010024384	pink1 (ENSLCAG00010024381)	ENSLCAG00010024366	agmat (ENSLCAG00010024351) #22	HSPG2 (ENSLCAG00010024179)	ENSLCAG00010024145	tmem269 (ENSLCAG00010024137)	ENSLCAG00010024134	ENSLCAG00010024125	ENSLCAG00010024118	ptpn22 (ENSLCAG00010024106)	ENSLCAG00010024100	ENSLCAG00010024090	ENSLCAG00010024064	PLXNA2 (ENSLCAG00010023936)	SLC26A9 (ENSLCAG00010023863)	slc48a1a (ENSLCAG00010023859)	RAPGEF3 (ENSLCAG00010023792)	itga5 (ENSLCAG00010023411)
Barramundi perch	MODERN SPECIES	1177													ENSLCAG00010016885	pink1 (ENSLCAG00010016893)	ENSLCAG00010016896	agmat (ENSLCAG00010016898) #22
Seriola	ANCESTRAL SPECIES	25	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT01010000222933	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000164219	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Greater amberjack	DUPLICATION
Greater amberjack	MODERN SPECIES	145	ENSSDUG00000004034	ints11 (ENSSDUG00000003980)	cptp (ENSSDUG00000003967)	ubxn10 (ENSSDUG00000003957)	ENSSDUG00000003949	ddx19a (ENSSDUG00000003930)	VWA5B1 (ENSSDUG00000003874)	mul1b (ENSSDUG00000003849)	ENSSDUG00000003832	fam43b (ENSSDUG00000003821)	ENSSDUG00000003812	ENSSDUG00000003801	pink1 (ENSSDUG00000003785)	ENSSDUG00000003775	agmat (ENSSDUG00000003756) #22	agmat (ENSSDUG00000003692) #22	HSPG2 (ENSSDUG00000003521)	ENSSDUG00000003454	tmem269 (ENSSDUG00000003433)	ENSSDUG00000003412	ENSSDUG00000003379	RSBN1 (ENSSDUG00000003355)	ptpn22 (ENSSDUG00000003341)	ENSSDUG00000003318	ENSSDUG00000003245	ENSSDUG00000003232	PLXNA2 (ENSSDUG00000003164)	ENSSDUG00000003143	SLC26A9 (ENSSDUG00000003105)	slc48a1a (ENSSDUG00000003082)	RAPGEF3 (ENSSDUG00000003031)
Greater amberjack	MODERN SPECIES	145	ENSSDUG00000004045	ENSSDUG00000004034	ints11 (ENSSDUG00000003980)	cptp (ENSSDUG00000003967)	ubxn10 (ENSSDUG00000003957)	ENSSDUG00000003949	ddx19a (ENSSDUG00000003930)	VWA5B1 (ENSSDUG00000003874)	mul1b (ENSSDUG00000003849)	ENSSDUG00000003832	fam43b (ENSSDUG00000003821)	ENSSDUG00000003812	ENSSDUG00000003801	pink1 (ENSSDUG00000003785)	ENSSDUG00000003775	agmat (ENSSDUG00000003756) #22	agmat (ENSSDUG00000003692) #22	HSPG2 (ENSSDUG00000003521)	ENSSDUG00000003454	tmem269 (ENSSDUG00000003433)	ENSSDUG00000003412	ENSSDUG00000003379	RSBN1 (ENSSDUG00000003355)	ptpn22 (ENSSDUG00000003341)	ENSSDUG00000003318	ENSSDUG00000003245	ENSSDUG00000003232	PLXNA2 (ENSSDUG00000003164)	ENSSDUG00000003143	SLC26A9 (ENSSDUG00000003105)	slc48a1a (ENSSDUG00000003082)
Yellowtail amberjack	MODERN SPECIES	3108	ENSSLDG00000017335	ENSSLDG00000017321	ints11 (ENSSLDG00000017198)	cptp (ENSSLDG00000017148)	ubxn10 (ENSSLDG00000017141)	ENSSLDG00000017130	ddx19a (ENSSLDG00000017107)	VWA5B1 (ENSSLDG00000017061)	mul1b (ENSSLDG00000017039)	ENSSLDG00000017024	fam43b (ENSSLDG00000017017)	ENSSLDG00000017006	ENSSLDG00000016991	pink1 (ENSSLDG00000016982)	TUBA1C (ENSSLDG00000016971)	agmat (ENSSLDG00000016947) #22	sema3bl (ENSSLDG00000016844)
Pleuronectoidei	ANCESTRAL SPECIES	24	ENSGT00940000155356.c	ENSGT00940000156199.a.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a
Tongue sole	MODERN SPECIES	1	HIPK1 (ENSCSEG00000017446)	ACAP3 (ENSCSEG00000017416)	ENSCSEG00000017410	ENSCSEG00000017401	ints11 (ENSCSEG00000017374)	cptp (ENSCSEG00000017363)	ENSCSEG00000017355	ENSCSEG00000017350	ddx19a (ENSCSEG00000017322)	VWA5B1 (ENSCSEG00000017297)	mul1b (ENSCSEG00000017285)	fam43b (ENSCSEG00000017282)	ENSCSEG00000017277	ENSCSEG00000017226	pink1 (ENSCSEG00000017215)	agmat (ENSCSEG00000017206) #22	HSPG2 (ENSCSEG00000017118)	tmem269 (ENSCSEG00000017100)	MAGI3 (ENSCSEG00000017072)	ENSCSEG00000017029	ptpn22 (ENSCSEG00000017013)	ENSCSEG00000016980	ENSCSEG00000016965	PLXNA2 (ENSCSEG00000016921)	slc48a1a (ENSCSEG00000016913)	RAPGEF3 (ENSCSEG00000016844)	itga5 (ENSCSEG00000016787)	CSRNP2 (ENSCSEG00000015249)	TFCP2 (ENSCSEG00000015210)	pou6f1 (ENSCSEG00000015192)	ENSCSEG00000015185
Turbot	MODERN SPECIES	2	ENSSMAG00000019442	ACAP3 (ENSSMAG00000019478)	ENSSMAG00000031260	ints11 (ENSSMAG00000019579)	cptp (ENSSMAG00000030979)	ubxn10 (ENSSMAG00000019647)	ddx19a (ENSSMAG00000019659)	VWA5B1 (ENSSMAG00000019978)	mul1b (ENSSMAG00000019986)	ENSSMAG00000019991	fam43b (ENSSMAG00000019995)	ENSSMAG00000020000	ENSSMAG00000020373	pink1 (ENSSMAG00000020523)	ENSSMAG00000018709	agmat (ENSSMAG00000020529) #22	ENSSMAG00000020541	ENSSMAG00000020715	tmem269 (ENSSMAG00000020719)	ENSSMAG00000020737	ENSSMAG00000020747	ptpn22 (ENSSMAG00000020748)	ENSSMAG00000035953	ENSSMAG00000020757	ENSSMAG00000023865	ENSSMAG00000020771	ENSSMAG00000026705	ENSSMAG00000020776	slc48a1a (ENSSMAG00000020778)	ENSSMAG00000020780	itga5 (ENSSMAG00000020785)
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Climbing perch	MODERN SPECIES	20	ENSATEG00000024381	ENSATEG00000024380	ints11 (ENSATEG00000024376)	cptp (ENSATEG00000026013)	ubxn10 (ENSATEG00000024371)	ENSATEG00000024368	ddx19a (ENSATEG00000024346)	VWA5B1 (ENSATEG00000024340)	mul1b (ENSATEG00000030021)	ENSATEG00000024335	fam43b (ENSATEG00000024333)	ENSATEG00000024300	ENSATEG00000024285	pink1 (ENSATEG00000024284)	ENSATEG00000024282	agmat (ENSATEG00000024280) #22	ENSATEG00000025624	tmem269 (ENSATEG00000024275)	ENSATEG00000024271	ENSATEG00000024262	ENSATEG00000024254	ptpn22 (ENSATEG00000024244)	ENSATEG00000024240	ENSATEG00000024216	rca2.1 (ENSATEG00000024213)	ENSATEG00000024208	ENSATEG00000024194	ENSATEG00000024183	slc48a1a (ENSATEG00000024179)	ENSATEG00000024166	itga5 (ENSATEG00000024161)
Siamese fighting fish	MODERN SPECIES	18	racgap1 (ENSBSLG00000013416)	ENSBSLG00000013523	cs (ENSBSLG00000013568)	COQ10A (ENSBSLG00000013656)	ankrd52a (ENSBSLG00000014186)	rnf41 (ENSBSLG00000014954)	dgkaa (ENSBSLG00000015038)	tamalin (ENSBSLG00000016569)	nr4a1 (ENSBSLG00000016678)	zgc:56699 (ENSBSLG00000016728)	ENSBSLG00000016777	fam43b (ENSBSLG00000016801)	ENSBSLG00000016894	pink1 (ENSBSLG00000016914)	ENSBSLG00000016959	agmat (ENSBSLG00000016986) #22	tmem269 (ENSBSLG00000017818)	ENSBSLG00000017858	RSBN1 (ENSBSLG00000018042)	ENSBSLG00000018050	ENSBSLG00000018075	ENSBSLG00000018160	rca2.1 (ENSBSLG00000018204)	mul1b (ENSBSLG00000018288)	VWA5B1 (ENSBSLG00000018307)	ddx19a (ENSBSLG00000018359)	ENSBSLG00000018696	ubxn10 (ENSBSLG00000018700)	cptp (ENSBSLG00000018702)	ints11 (ENSBSLG00000018712)	ENSBSLG00000019248
Zig-zag eel	DUPLICATION
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000004597	ENSMAMG00000004574	ints11 (ENSMAMG00000004522)	cptp (ENSMAMG00000004511)	ubxn10 (ENSMAMG00000004500)	ENSMAMG00000004481	ddx19a (ENSMAMG00000004449)	VWA5B1 (ENSMAMG00000004393)	mul1b (ENSMAMG00000004356)	ENSMAMG00000004339	fam43b (ENSMAMG00000004325)	ENSMAMG00000004309	ENSMAMG00000004288	pink1 (ENSMAMG00000025777)	agmat (ENSMAMG00000027089) #22	agmat (ENSMAMG00000004215) #22	ENSMAMG00000004189	ENSMAMG00000003831	tmem269 (ENSMAMG00000003791)	ENSMAMG00000003647	ENSMAMG00000003633	ENSMAMG00000027944	ENSMAMG00000003490	rca2.1 (ENSMAMG00000003292)	ENSMAMG00000003270	ENSMAMG00000002894	ENSMAMG00000027455	ENSMAMG00000002771	slc48a1a (ENSMAMG00000002749)	ENSMAMG00000002721	itga5 (ENSMAMG00000002623)
Zig-zag eel	MODERN SPECIES	21	ACAP3 (ENSMAMG00000004633)	ENSMAMG00000004597	ENSMAMG00000004574	ints11 (ENSMAMG00000004522)	cptp (ENSMAMG00000004511)	ubxn10 (ENSMAMG00000004500)	ENSMAMG00000004481	ddx19a (ENSMAMG00000004449)	VWA5B1 (ENSMAMG00000004393)	mul1b (ENSMAMG00000004356)	ENSMAMG00000004339	fam43b (ENSMAMG00000004325)	ENSMAMG00000004309	ENSMAMG00000004288	pink1 (ENSMAMG00000025777)	agmat (ENSMAMG00000027089) #22	agmat (ENSMAMG00000004215) #22	ENSMAMG00000004189	ENSMAMG00000003831	tmem269 (ENSMAMG00000003791)	ENSMAMG00000003647	ENSMAMG00000003633	ENSMAMG00000027944	ENSMAMG00000003490	rca2.1 (ENSMAMG00000003292)	ENSMAMG00000003270	ENSMAMG00000002894	ENSMAMG00000027455	ENSMAMG00000002771	slc48a1a (ENSMAMG00000002749)	ENSMAMG00000002721
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Tetraodontidae	ANCESTRAL SPECIES	2	ENSGT00940000160300	ENSGT01010000222360.B	ENSGT00940000155356.c	ENSGT00940000156199.a.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b	ENSGT00950000183188.A.a.b	ENSGT00390000002944	ENSGT00940000159411.b	ENSGT00940000160178	ENSGT00530000063693.b	ENSGT00940000157965.d	ENSGT00940000155407	ENSGT00390000002707	ENSGT00950000183113.a.b	ENSGT00940000160207.b	ENSGT00940000155094.b
Tetraodon	MODERN SPECIES	24	SYT6 (ENSTNIG00000012409)	olfml3a (ENSTNIG00000012410)	c1qtnf12 (ENSTNIG00000012411)	HIPK1 (ENSTNIG00000012412)	ACAP3 (ENSTNIG00000012413)	ENSTNIG00000012414	ints11 (ENSTNIG00000012415)	cptp (ENSTNIG00000012416)	ddx19a (ENSTNIG00000012417)	VWA5B1 (ENSTNIG00000012418)	mul1b (ENSTNIG00000012419)	fam43b (ENSTNIG00000012420)	ENSTNIG00000012421	ENSTNIG00000012422	pink1 (ENSTNIG00000012423)	agmat (ENSTNIG00000012424) #22	HSPG2 (ENSTNIG00000012425)	tmem269 (ENSTNIG00000012426)	ENSTNIG00000012427	ENSTNIG00000012428	ENSTNIG00000001018	ENSTNIG00000012430	pmelb (ENSTNIG00000012431)	sarnp (ENSTNIG00000012432)	jph2 (ENSTNIG00000012433)	GDAP1L1 (ENSTNIG00000012434)	fitm2 (ENSTNIG00000012435)	hnf4a (ENSTNIG00000012436)	ttpal (ENSTNIG00000012437)	ada (ENSTNIG00000012438)	ccn5 (ENSTNIG00000012439)
Fugu	MODERN SPECIES	15	c1qtnf12 (ENSTRUG00000031268)	sdf4 (ENSTRUG00000004389)	HIPK1 (ENSTRUG00000033341)	ACAP3 (ENSTRUG00000004785)	ENSTRUG00000005476	ints11 (ENSTRUG00000005523)	cptp (ENSTRUG00000005919)	ENSTRUG00000025440	VWA5B1 (ENSTRUG00000006799)	mul1b (ENSTRUG00000007255)	ENSTRUG00000020982	fam43b (ENSTRUG00000020184)	ENSTRUG00000007331	ENSTRUG00000007909	pink1 (ENSTRUG00000008101)	agmat (ENSTRUG00000008312) #22	HSPG2 (ENSTRUG00000008424)	tmem269 (ENSTRUG00000026025)	ENSTRUG00000003526	tuba1b (ENSTRUG00000000693)	tuba1c (ENSTRUG00000025128)	pmelb (ENSTRUG00000030062)	sarnp (ENSTRUG00000009497)	jph2 (ENSTRUG00000009664)	GDAP1L1 (ENSTRUG00000009791)	hnf4a (ENSTRUG00000029889)	ttpal (ENSTRUG00000010137)	ada (ENSTRUG00000027623)	fitm2 (ENSTRUG00000029484)	hnf4a (ENSTRUG00000028089)	ttpal (ENSTRUG00000032670)
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Ballan wrasse	MODERN SPECIES	248								mul1b (ENSLBEG00000019134)	mul1b (ENSLBEG00000019007)	fam43b (ENSLBEG00000018975)	ENSLBEG00000018960	ENSLBEG00000018522	ENSLBEG00000018275	pink1 (ENSLBEG00000018244)	ENSLBEG00000018221	agmat (ENSLBEG00000018178) #22	HSPG2 (ENSLBEG00000017849)	tmem269 (ENSLBEG00000017761)	ENSLBEG00000017732	ENSLBEG00000017692	ENSLBEG00000017652	ptpn22 (ENSLBEG00000017611)	ENSLBEG00000017578	ENSLBEG00000017526	ENSLBEG00000017439	ENSLBEG00000017404	PLXNA2 (ENSLBEG00000017308)
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931
Perciformes	ANCESTRAL SPECIES	4	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00940000154457.a.a.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00940000156199.a.b	ENSGT00950000183205.b.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT00390000003023	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a
Lumpfish	MODERN SPECIES	22	ENSCLMG00005003792	ENSCLMG00005003789	ints11 (ENSCLMG00005003784)	cptp (ENSCLMG00005003781)	ubxn10 (ENSCLMG00005003780)	ENSCLMG00005003779	ddx19a (ENSCLMG00005003703)	ENSCLMG00005003701	mul1b (ENSCLMG00005003699)	ENSCLMG00005003697	fam43b (ENSCLMG00005003696)	ENSCLMG00005003646	ENSCLMG00005003640	pink1 (ENSCLMG00005003639)	ENSCLMG00005003638	agmat (ENSCLMG00005003634) #22	HSPG2 (ENSCLMG00005003076)	tmem269 (ENSCLMG00005002948)	ENSCLMG00005002888	RSBN1 (ENSCLMG00005002784)	ptpn22 (ENSCLMG00005002778)	ENSCLMG00005002775	rca2.1 (ENSCLMG00005002768)	PLXNA2 (ENSCLMG00005000356)	SLC26A9 (ENSCLMG00005000138)	slc48a1a (ENSCLMG00005020580)	RAPGEF3 (ENSCLMG00005019505)	itga5 (ENSCLMG00005019276)	CSRNP2 (ENSCLMG00005019271)	TFCP2 (ENSCLMG00005019199)	pou6f1 (ENSCLMG00005019165)
Stickleback	MODERN SPECIES	11	NOL9 (ENSGACG00000011178)	PLEKHG5 (ENSGACG00000011168)	ENSGACG00000011163	irx7 (ENSGACG00000011160)	cd40 (ENSGACG00000011155)	cbln4 (ENSGACG00000011149)	ENSGACG00000011148	PFDN4 (ENSGACG00000011139)	ENSGACG00000011137	TSHZ2 (ENSGACG00000011135)	ZFP64 (ENSGACG00000011128)	sall4 (ENSGACG00000011124)	ATP9A (ENSGACG00000011089)	NFATC2 (ENSGACG00000011086)	kcng1 (ENSGACG00000011084)	agmat (ENSGACG00000011061) #22	ENSGACG00000011057	ENSGACG00000011047	tmem269 (ENSGACG00000011044)	ENSGACG00000011034	ENSGACG00000011033	RSBN1 (ENSGACG00000011031)	ENSGACG00000011025	ENSGACG00000011023	ENSGACG00000011017	ENSGACG00000011016	PLXNA2 (ENSGACG00000011007)	ENSGACG00000011005	SLC26A9 (ENSGACG00000011000)	RAPGEF3 (ENSGACG00000010990)	itga5 (ENSGACG00000010945)
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00940000155356.c	ENSGT00940000156199.a.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00940000154457.a.a.b	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000163310.k.a	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629
Pike perch	MODERN SPECIES	84	HIPK1 (ENSSLUG00000013815)	ACAP3 (ENSSLUG00000012120)	ENSSLUG00000012019	ints11 (ENSSLUG00000011957)	cptp (ENSSLUG00000011912)	ubxn10 (ENSSLUG00000011909)	ENSSLUG00000011905	ddx19a (ENSSLUG00000011605)	mul1b (ENSSLUG00000011576)	ENSSLUG00000011570	fam43b (ENSSLUG00000011564)	ENSSLUG00000011535	ENSSLUG00000011524	pink1 (ENSSLUG00000011518)	ENSSLUG00000011510	agmat (ENSSLUG00000011498) #22	HSPG2 (ENSSLUG00000007598)	tmem269 (ENSSLUG00000007298)	MAGI3 (ENSSLUG00000007276)	RSBN1 (ENSSLUG00000007252)	ENSSLUG00000007237	ENSSLUG00000007232	ENSSLUG00000007224	ENSSLUG00000007206	ENSSLUG00000007187	ENSSLUG00000007169	ENSSLUG00000007164	PLXNA2 (ENSSLUG00000002137)	SLC26A9 (ENSSLUG00000023470)	slc48a1a (ENSSLUG00000023464)	RAPGEF3 (ENSSLUG00000021985)
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00940000182252	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a
Gilthead seabream	MODERN SPECIES	21	HIPK1 (ENSSAUG00010003463)	ACAP3 (ENSSAUG00010000789)	ENSSAUG00010000714	ENSSAUG00010000711	ints11 (ENSSAUG00010000702)	cptp (ENSSAUG00010000694)	ubxn10 (ENSSAUG00010000691)	ENSSAUG00010000689	ddx19a (ENSSAUG00010000580)	mul1b (ENSSAUG00010000570)	fam43b (ENSSAUG00010000566)	ENSSAUG00010000564	ENSSAUG00010000559	pink1 (ENSSAUG00010000554)	ENSSAUG00010000547	agmat (ENSSAUG00010000543) #22	ENSSAUG00010000533	ENSSAUG00010000329	tmem269 (ENSSAUG00010000322)	ENSSAUG00010000313	MAGI3 (ENSSAUG00010015177)	RSBN1 (ENSSAUG00010015170)	ptpn22 (ENSSAUG00010015167)	ENSSAUG00010015163	ENSSAUG00010015156	ENSSAUG00010015142	ENSSAUG00010015137	PLXNA2 (ENSSAUG00010014781)	ENSSAUG00010014756	SLC26A9 (ENSSAUG00010014752)	slc48a1a (ENSSAUG00010014750)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	15	ENSGT00940000182252	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000176954	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT00940000176941	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000001206	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00950000183195.a #22	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203957	ENSGT00940000154967.a.a.b	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00940000157629
Large yellow croaker	MODERN SPECIES	487	ENSLCRG00005018083	cbln4 (ENSLCRG00005018082)	cd40 (ENSLCRG00005018080)	irx7 (ENSLCRG00005018079)	ENSLCRG00005018078	PLEKHG5 (ENSLCRG00005018076)	NOL9 (ENSLCRG00005018074)	ZBTB48 (ENSLCRG00005018073)	klhl21 (ENSLCRG00005018072)	SYT6 (ENSLCRG00005018070)	olfml3a (ENSLCRG00005018069)	ENSLCRG00005018068	c1qtnf12 (ENSLCRG00005018066)	sdf4 (ENSLCRG00005018061)	HIPK1 (ENSLCRG00005018007)	agmat (ENSLCRG00005018002) #22	HSPG2 (ENSLCRG00005017842)	ENSLCRG00005017827	tmem269 (ENSLCRG00005017824)	ENSLCRG00005017823	ENSLCRG00005017777	RSBN1 (ENSLCRG00005017772)	ENSLCRG00005017770	ENSLCRG00005017748	ENSLCRG00005017739	ENSLCRG00005017737	PLXNA2 (ENSLCRG00005012619)	SLC26A9 (ENSLCRG00005012566)	slc48a1a (ENSLCRG00005012564)	RAPGEF3 (ENSLCRG00005010395)	itga5 (ENSLCRG00005007326)
Protacanthopterygii	ANCESTRAL SPECIES	6	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00990000208651	ENSGT00940000154417.c	ENSGT00940000158938.e	ENSGT01010000223025	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00940000159698 #24	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000156496.a.b	ENSGT00390000001969.a.c	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000163310.k.a	ENSGT00940000164219	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.a	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e
Northern pike	MODERN SPECIES	11	HIPK1 (ENSELUG00000005094)	ACAP3 (ENSELUG00000004943)	ENSELUG00000004765	ints11 (ENSELUG00000004815)	cptp (ENSELUG00000004757)	ubxn10 (ENSELUG00000027926)	ddx19a (ENSELUG00000004740)	ENSELUG00000004729	VWA5B1 (ENSELUG00000004715)	mul1b (ENSELUG00000004693)	fam43b (ENSELUG00000004688)	ENSELUG00000004681	ENSELUG00000004668	cdaa (ENSELUG00000030887)	pink1 (ENSELUG00000004625)	agmat (ENSELUG00000004608) #22	DNAJC16 (ENSELUG00000004587) #23	casp9 (ENSELUG00000004569) #24	HSPG2 (ENSELUG00000004532)	tmem269 (ENSELUG00000004459)	ENSELUG00000004432	MAGI3 (ENSELUG00000004406)	ENSELUG00000026971	RSBN1 (ENSELUG00000004372)	ptpn22 (ENSELUG00000004337)	ENSELUG00000004235	ENSELUG00000027007	PLXNA2 (ENSELUG00000004058)	ENSELUG00000030601	SLC26A9 (ENSELUG00000003964)	slc48a1a (ENSELUG00000025670)
Salmoninae	ANCESTRAL SPECIES	10	ENSGT00940000155356.c.a.a	ENSGT00940000156199.a.b.e	ENSGT01100000263537.b.a.a.a.b.i	ENSGT00940000157644.i	ENSGT00940000165549.i	ENSGT00990000210720	ENSGT00940000154417.c.g	ENSGT00940000158938.e.a	ENSGT00940000158938.f	ENSGT00390000004940.a.b.p	ENSGT00390000012141.b.e	ENSGT00940000162826.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a.e	ENSGT00390000001206.i	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a.c #23	ENSGT00940000159698.f #24	ENSGT00940000156670.e.a	ENSGT00940000155851.c.a.d #23	ENSGT00940000159698.e #24	ENSGT00940000156670.e.b	ENSGT00940000154169.B.b.a	ENSGT00940000156496.a.b.g	ENSGT00390000001969.a.c.b	ENSGT00940000167346.b	ENSGT00940000164219.f	ENSGT00390000008414.h.c	ENSGT01050000244850.C.b.u.a.c.b	ENSGT00940000161149	ENSGT01100000263544.c.a.b.b.c
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00940000155356.c.a.a	ENSGT00940000156199.a.b.e	ENSGT01100000263537.b.a.a.a.b.i	ENSGT00940000157644.i	ENSGT00940000165549.i	ENSGT00990000210720	ENSGT00990000208651.b	ENSGT00940000154417.c.g	ENSGT00940000158938.e.a	ENSGT00390000004940.a.b.p	ENSGT00390000012141.b.e	ENSGT00940000162826.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a.e	ENSGT00390000001206.i	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a.c #23	ENSGT00940000159698.f #24	ENSGT00940000156670.e.a	ENSGT00940000154169.B.b.b	ENSGT00940000157871.i	ENSGT00940000156496.a.b.h	ENSGT00390000001969.a.c.a	ENSGT00940000167346.a	ENSGT00990000203827	ENSGT00940000163310.k.a	ENSGT00940000164219.e	ENSGT00390000008414.h.d	ENSGT01050000244850.C.b.u.a.c.a	ENSGT01100000263544.c.a.b.b.d	ENSGT00390000002307.e.e
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000155356.c.a.a	ENSGT00940000156199.a.b.e	ENSGT01100000263537.b.a.a.a.b.i	ENSGT00940000157644.i	ENSGT00940000165549.i	ENSGT00990000210720	ENSGT00990000208651.b	ENSGT00940000154417.c.g	ENSGT00940000158938.e.a	ENSGT00390000004940.a.b.p	ENSGT00390000012141.b.e	ENSGT00940000162826.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a.e	ENSGT00390000001206.i	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a.c #23	ENSGT00940000159698.f #24	ENSGT00940000156670.e.a	ENSGT00940000154169.B.b.b	ENSGT00940000157871.i	ENSGT00940000156496.a.b.h	ENSGT00390000001969.a.c.a	ENSGT00940000167346.a	ENSGT00990000203827	ENSGT00940000163310.k.a	ENSGT00940000164219.e	ENSGT00390000008414.h.d	ENSGT00390000011383.j.b	ENSGT01050000244850.C.b.u.a.c.a	ENSGT01100000263544.c.a.b.b.d
Atlantic salmon	MODERN SPECIES	6	ACAP3 (ENSSSAG00000074293)	ENSSSAG00000074210	ints11 (ENSSSAG00000074143)	cptp (ENSSSAG00000074131)	ENSSSAG00000074127	ENSSSAG00000074123	ddx19a (ENSSSAG00000073068)	VWA5B1 (ENSSSAG00000074063)	CAMK2N1 (ENSSSAG00000091208)	fam43b (ENSSSAG00000092023)	mul1b (ENSSSAG00000074058)	ENSSSAG00000074054	cdaa (ENSSSAG00000116499)	PINK1 (ENSSSAG00000074044)	djc16 (ENSSSAG00000073976) #23	SPEB (ENSSSAG00000074038) #22	casp9 (ENSSSAG00000073963) #24	ENSSSAG00000074254	ENSSSAG00000083643	tmem269 (ENSSSAG00000073481)	ENSSSAG00000073472	ENSSSAG00000073411	ENSSSAG00000073386	ENSSSAG00000110489	ptpn22 (ENSSSAG00000073380)	ENSSSAG00000112052	ENSSSAG00000073365	ENSSSAG00000073348	ENSSSAG00000073342	ENSSSAG00000065441	ENSSSAG00000065062
River trout	MODERN SPECIES	20	ENSSTUG00000034709	ints11 (ENSSTUG00000034737)	cptp (ENSSTUG00000035388)	ENSSTUG00000035402	ENSSTUG00000035440	ddx19a (ENSSTUG00000035452)	ENSSTUG00000035674	VWA5B1 (ENSSTUG00000035691)	ENSSTUG00000035726	mul1b (ENSSTUG00000035740)	ENSSTUG00000035763	fam43b (ENSSTUG00000035775)	ENSSTUG00000035789	cdaa (ENSSTUG00000035802)	pink1 (ENSSTUG00000035841)	agmat (ENSSTUG00000035856) #22	DNAJC16 (ENSSTUG00000035903) #23	casp9 (ENSSTUG00000036266) #24	HSPG2 (ENSSTUG00000036522)	tmem269 (ENSSTUG00000042259)	ENSSTUG00000042313	ENSSTUG00000042376	RSBN1 (ENSSTUG00000042523)	ptpn22 (ENSSTUG00000042543)	ENSSTUG00000042644	ENSSTUG00000042673	ENSSTUG00000042954	rimoc1 (ENSSTUG00000042968)	PLXNA2 (ENSSTUG00000043159)	ENSSTUG00000045568	SLC26A9 (ENSSTUG00000003455)
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000155356.c.a.a	ENSGT00940000156199.a.b.e	ENSGT01100000263537.b.a.a.a.b.i	ENSGT00940000157644.i	ENSGT00940000165549.i	ENSGT00990000210720	ENSGT00990000208651.b	ENSGT00940000154417.c.g	ENSGT00940000158938.e.a	ENSGT01000000221356	ENSGT00390000012141.b.e	ENSGT00940000162826.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a.e	ENSGT00390000001206.i	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a.c #23	ENSGT00940000159698.f #24	ENSGT00940000156670.e.a	ENSGT00940000154169.B.b.b	ENSGT00940000157871.i	ENSGT00940000156496.a.b.h	ENSGT00390000001969.a.c.a	ENSGT00940000167346.a	ENSGT00990000203827	ENSGT00940000164219.e	ENSGT00940000154967.a.a.b.j	ENSGT00390000008414.h.d	ENSGT01050000244850.C.b.u.a.c.a	ENSGT01100000263544.c.a.b.b.d	ENSGT00390000002307.e.e
Rainbow trout	MODERN SPECIES	30	sdf4 (ENSOMYG00000007225)	ENSOMYG00000006963	ACAP3 (ENSOMYG00000005479)	ENSOMYG00000003969	ints11 (ENSOMYG00000003726)	cptp (ENSOMYG00000003361)	ENSOMYG00000003323	ENSOMYG00000003287	ddx19a (ENSOMYG00000002953)	VWA5B1 (ENSOMYG00000002653)	mul1b (ENSOMYG00000002608)	fam43b (ENSOMYG00000002586)	ENSOMYG00000002569	cdaa (ENSOMYG00000002537)	pink1 (ENSOMYG00000002452)	agmat (ENSOMYG00000002437) #22	ENSOMYG00000002414 #23	CASP9 (ENSOMYG00000002381) #24	ENSOMYG00000072826	ENSOMYG00000076660	ENSOMYG00000002032	tmem269 (ENSOMYG00000001673)	ENSOMYG00000001639	ENSOMYG00000001602	ENSOMYG00000001519	ptpn22 (ENSOMYG00000025719)	ENSOMYG00000050208	ENSOMYG00000025476	ENSOMYG00000025272	ENSOMYG00000024895	ENSOMYG00000024629
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT01010000222360.B.c	ENSGT00940000155356.c.a.a	ENSGT00940000156199.a.b.e	ENSGT01100000263537.b.a.a.a.b.i	ENSGT00940000157644.i	ENSGT00940000165549.i	ENSGT00990000208651.b	ENSGT00940000154417.c.g	ENSGT00940000158938.e.a	ENSGT01000000221356	ENSGT00390000012141.b.e	ENSGT00940000162826.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a.e	ENSGT00390000001206.i	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a.c #23	ENSGT00940000159698.f #24	ENSGT00940000154169.B.b.b	ENSGT00940000157871.i	ENSGT00940000156496.a.b.h	ENSGT00390000001969.a.c.a	ENSGT00390000001969.a.d	ENSGT00940000167346.a	ENSGT00990000203827	ENSGT00940000164219.e	ENSGT00940000154967.a.a.b.j	ENSGT00390000008414.h.d	ENSGT01050000244850.C.b.u.a.c.a	ENSGT01100000263544.c.a.b.b.d	ENSGT00940000159931.a
Coho salmon	MODERN SPECIES	8	c1qtnf12 (ENSOKIG00005033351)	sdf4 (ENSOKIG00005033319)	HIPK1 (ENSOKIG00005033247)	ACAP3 (ENSOKIG00005026588)	ENSOKIG00005026189	ints11 (ENSOKIG00005025788)	cptp (ENSOKIG00005025737)	ENSOKIG00005025697	ddx19a (ENSOKIG00005024518)	ENSOKIG00005024455	fam43b (ENSOKIG00005024441)	mul1b (ENSOKIG00005024432)	ENSOKIG00005024413	cdaa (ENSOKIG00005024360)	pink1 (ENSOKIG00005024334)	agmat (ENSOKIG00005024286) #22	ENSOKIG00005024275	ENSOKIG00005024265	tmem269 (ENSOKIG00005021916)	ENSOKIG00005021903	ENSOKIG00005021889	ENSOKIG00005021663	RSBN1 (ENSOKIG00005021574)	ENSOKIG00005021562	ptpn22 (ENSOKIG00005021504)	ENSOKIG00005021370	ENSOKIG00005021298	PLXNA2 (ENSOKIG00005020400)	ENSOKIG00005020261	SLC26A9 (ENSOKIG00005020248)	ENSOKIG00005020219
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	2412																AGMAT (ENSOTSG00005021425) #22
Chinook salmon	MODERN SPECIES	7	sdf4 (ENSOTSG00005020710)	HIPK1 (ENSOTSG00005020658)	ACAP3 (ENSOTSG00005009277)	ENSOTSG00005009252	ints11 (ENSOTSG00005007689)	cptp (ENSOTSG00005007674)	ENSOTSG00005007672	ddx19a (ENSOTSG00005006717)	VWA5B1 (ENSOTSG00005006709)	ENSOTSG00005006708	mul1b (ENSOTSG00005006706)	fam43b (ENSOTSG00005006705)	ENSOTSG00005006704	cdaa (ENSOTSG00005006696)	pink1 (ENSOTSG00005006694)	agmat (ENSOTSG00005006692) #22	DNAJC16 (ENSOTSG00005006251) #23	casp9 (ENSOTSG00005006222) #24	tmem269 (ENSOTSG00005005455)	ENSOTSG00005005453	MAGI3 (ENSOTSG00005005450)	ENSOTSG00005005447	ENSOTSG00005005442	ptpn22 (ENSOTSG00005005438)	ENSOTSG00005005436	ENSOTSG00005005427	ENSOTSG00005005420	ENSOTSG00005005418	ENSOTSG00005005407	SLC26A9 (ENSOTSG00005005403)	RAPGEF3 (ENSOTSG00005005370)
Chinook salmon	MODERN SPECIES	2527																ENSOTSG00005020260 #22
Huchen	DUPLICATION
Huchen	MODERN SPECIES	11365																ENSHHUG00000015066 #22
Huchen	DUPLICATION
Huchen	MODERN SPECIES	3294													ENSHHUG00000010776	cdaa (ENSHHUG00000010792)	pink1 (ENSHHUG00000010829)	agmat (ENSHHUG00000010872) #22	DNAJC16 (ENSHHUG00000010884) #23	casp9 (ENSHHUG00000010912) #24	ENSHHUG00000010927
Huchen	MODERN SPECIES	975	sdf4 (ENSHHUG00000030773)	CCDC42 (ENSHHUG00000030776)	HIPK1 (ENSHHUG00000030782)	ACAP3 (ENSHHUG00000030832)	ENSHHUG00000031686	ENSHHUG00000031688	ints11 (ENSHHUG00000031692)	cptp (ENSHHUG00000031704)	ubxn10 (ENSHHUG00000031713)	ddx19a (ENSHHUG00000031734)	VWA5B1 (ENSHHUG00000032540)	mul1b (ENSHHUG00000032542)	fam43b (ENSHHUG00000032548)	ENSHHUG00000032558	pink1 (ENSHHUG00000032876)	agmat (ENSHHUG00000032880) #22	DNAJC16 (ENSHHUG00000032887) #23	casp9 (ENSHHUG00000032935) #24	HSPG2 (ENSHHUG00000032952)	tmem269 (ENSHHUG00000033238)	MAGI3 (ENSHHUG00000033263)	RSBN1 (ENSHHUG00000033583)	ptpn22 (ENSHHUG00000033595)	ENSHHUG00000033604	ENSHHUG00000033663	ENSHHUG00000033672
Otomorpha	ANCESTRAL SPECIES	22	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT01060000249781	ENSGT00940000154417.c	ENSGT00990000208651	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00940000159698 #24
Otophysi	ANCESTRAL SPECIES	77	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT01060000249781	ENSGT00940000154417.c	ENSGT00990000208651	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23
Characiphysae	ANCESTRAL SPECIES	16	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644.k	ENSGT00940000165549	ENSGT00390000012939	ENSGT01060000249781	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00950000183117.b	ENSGT00390000004348	ENSGT00950000182985.b.a	ENSGT00950000182941.a.a.a.a	ENSGT01090000260052.a.b.j.d	ENSGT00950000183109.d.e.b	ENSGT00940000155588.a	ENSGT00940000165075.b	ENSGT00530000063713.b.b	ENSGT00940000154895.a.a	ENSGT00940000155694.h	ENSGT00950000182936.a.a.b.b	ENSGT00940000155201.d	ENSGT01100000263512.a.a.b.a
Channel catfish	MODERN SPECIES	6	ACAP3 (ENSIPUG00000022719)	cpsf3l (ENSIPUG00000022761)	ENSIPUG00000022782	gltpd1 (ENSIPUG00000022788)	ubxn10 (ENSIPUG00000022791)	ddx19a (ENSIPUG00000022795)	ENSIPUG00000022813	VWA5B1 (ENSIPUG00000022816)	camk2n2 (ENSIPUG00000022831)	mul1 (ENSIPUG00000022833)	fam43b (ENSIPUG00000022841)	ENSIPUG00000022843	ENSIPUG00000022847	cda (ENSIPUG00000022850)	pink1 (ENSIPUG00000000561)	agmat (ENSIPUG00000000576) #22	DNAJC16 (ENSIPUG00000000579) #23	EPT1 (ENSIPUG00000000603)	iyd (ENSIPUG00000000621)	Ppp1r14c (ENSIPUG00000000630)	ENSIPUG00000000639	XCR1 (ENSIPUG00000000649)	XCR1 (ENSIPUG00000000653)	XCR1 (ENSIPUG00000000658)	ENSIPUG00000000661	cyp17a2 (ENSIPUG00000000675)	egr4 (ENSIPUG00000000682)	ENSIPUG00000000694	DCLK2 (ENSIPUG00000000697)	ENSIPUG00000000719	ENSIPUG00000000749
Characiphysae_b	ANCESTRAL SPECIES	8	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644.k	ENSGT00940000165549	ENSGT00390000012939	ENSGT01060000249781	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00950000183117.b	ENSGT00390000004348	ENSGT00950000182985.b.a	ENSGT00950000182941.a.a.a.a	ENSGT01090000260052.a.b.j.d	ENSGT00950000183109.d.e.b	ENSGT00940000155588.a	ENSGT00940000165075.b	ENSGT00530000063713.b.b	ENSGT00940000154895.a.a	ENSGT00940000155694.h	ENSGT00950000182936.a.a.b.b	ENSGT00940000155201.d	ENSGT01100000263512.a.a.b.a
Characoidei	ANCESTRAL SPECIES	8	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644.k	ENSGT00940000165549	ENSGT00390000012939	ENSGT01060000249781	ENSGT00940000154417.c	ENSGT00940000176954	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00950000183117.b	ENSGT00390000004348	ENSGT00950000182985.b.a	ENSGT00950000182941.a.a.a.a	ENSGT01090000260052.a.b.j.d	ENSGT00950000183109.d.e.b	ENSGT00940000155588.a	ENSGT00940000165075.b	ENSGT00530000063713.b.b	ENSGT00940000154895.a.a	ENSGT00940000155694.h	ENSGT00950000182936.a.a.b.b	ENSGT00940000155201.d	ENSGT01100000263512.a.a.b.a
Red-bellied piranha	MODERN SPECIES	134	ENSPNAG00000022136	ints11 (ENSPNAG00000022204)	cptp (ENSPNAG00000022219)	ubxn10 (ENSPNAG00000022225)	ENSPNAG00000022242	ddx19a (ENSPNAG00000022254)	VWA5B1 (ENSPNAG00000022312)	CAMK2N1 (ENSPNAG00000022326)	mul1b (ENSPNAG00000022374)	fam43b (ENSPNAG00000022389)	ENSPNAG00000022398	ENSPNAG00000022405	cdaa (ENSPNAG00000022416)	cdaa (ENSPNAG00000022445)	pink1 (ENSPNAG00000022461)	agmat (ENSPNAG00000022490) #22	DNAJC16 (ENSPNAG00000022574) #23	selenoi (ENSPNAG00000022609)	iyd (ENSPNAG00000022631)	ppp1r14c (ENSPNAG00000022649)	ENSPNAG00000022732	XCR1 (ENSPNAG00000022758)	ENSPNAG00000022806
Mexicana tetra	MODERN SPECIES	6	ENSAMXG00000032583	ENSAMXG00000039043	ENSAMXG00000031053	ednrab (ENSAMXG00000035645)	ubxn10 (ENSAMXG00000038725)	ddx19a (ENSAMXG00000015325)	ENSAMXG00000034791	VWA5B1 (ENSAMXG00000032840)	CAMK2N1 (ENSAMXG00000032815)	mul1b (ENSAMXG00000036074)	fam43b (ENSAMXG00000024828)	ENSAMXG00000008981	ENSAMXG00000042708	cdaa (ENSAMXG00000034539)	pink1 (ENSAMXG00000038123)	agmat (ENSAMXG00000030343) #22	DNAJC16 (ENSAMXG00000018083) #23	iyd (ENSAMXG00000030031)	selenoi (ENSAMXG00000042381)	ppp1r14c (ENSAMXG00000037953)	ENSAMXG00000041374	ENSAMXG00000025984	ENSAMXG00000038595	cyp17a2 (ENSAMXG00000043927)	egr4 (ENSAMXG00000030340)	ENSAMXG00000034155	DCLK2 (ENSAMXG00000040052)	ENSAMXG00000036777	FHIP1A (ENSAMXG00000004939)	ENSAMXG00000004935	ENSAMXG00000043047
Electric eel	MODERN SPECIES	30	ube2j2 (ENSEEEG00000001758)	ACAP3 (ENSEEEG00000001768)	ints11 (ENSEEEG00000001818)	cptp (ENSEEEG00000001847)	ubxn10 (ENSEEEG00000001848)	ddx19a (ENSEEEG00000001851)	ENSEEEG00000001864	VWA5B1 (ENSEEEG00000001867)	CAMK2N1 (ENSEEEG00000001868)	mul1b (ENSEEEG00000001870)	fam43b (ENSEEEG00000001871)	ENSEEEG00000001877	ENSEEEG00000001920	cdaa (ENSEEEG00000002115)	pink1 (ENSEEEG00000002120)	agmat (ENSEEEG00000002126) #22	DNAJC16 (ENSEEEG00000002127) #23	selenoi (ENSEEEG00000002133)	iyd (ENSEEEG00000002187)	ppp1r14c (ENSEEEG00000002188)	ENSEEEG00000002189	cyp17a2 (ENSEEEG00000002198)	egr4 (ENSEEEG00000002741)	ENSEEEG00000002743	ENSEEEG00000002747	ENSEEEG00000002750	ENSEEEG00000002773	ENSEEEG00000002803	TMEM184C (ENSEEEG00000002831)	ednrab (ENSEEEG00000002855)	ttc29 (ENSEEEG00000003073)
Cyprinoidei	ANCESTRAL SPECIES		ENSGT00940000156199.a.b.c	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644.m.a	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000154417.c	ENSGT00990000208651	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00390000012141.b	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00950000182888.a.a.a.g.b.b	ENSGT00950000182888.a.a.a.g.b.a	ENSGT00950000182888.a.a.a.g.a	ENSGT00510000046843.a.b.k	ENSGT00950000183003.a.b	ENSGT00940000165935	ENSGT00940000166581	ENSGT00940000165811	ENSGT00940000159728	ENSGT00950000182932.C.b	ENSGT00390000006696	ENSGT00990000209982	ENSGT00940000159884	ENSGT00950000183051.a.b
Cyprininae	ANCESTRAL SPECIES	3	ENSGT00940000156199.a.b.c.b	ENSGT01100000263537.b.a.a.a.b.d	ENSGT00940000157644.m.a.b	ENSGT00940000165549.c	ENSGT00990000208651.c.b	ENSGT00940000154417.c.c	ENSGT00940000158938.a.b	ENSGT00390000004940.a.b.j.a.a	ENSGT00390000012141.b.g	ENSGT00940000162826.d	ENSGT01050000244971.B.b.d	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a.d.a.a	ENSGT00390000000911.h.a.d.b	ENSGT00390000001206.c.a	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a.a #23	ENSGT00950000182888.a.a.a.g.b.b.b	ENSGT00510000046843.a.b.k.c	ENSGT00950000183003.a.b.c.b	ENSGT00940000165935.d.a	ENSGT00940000166581.b	ENSGT00950000182879.a.a.c.b	ENSGT00950000182879.a.a.d.a	ENSGT00950000182963.b.a.c.a	ENSGT00940000158080.k	ENSGT00940000160862	ENSGT00940000160190.a.b.a.b	ENSGT00940000165797	ENSGT00940000159567.a.b.a	ENSGT00390000000358.z.c
Cyprininae_a	ANCESTRAL SPECIES	5	ENSGT00940000156199.a.b.c.b	ENSGT01100000263537.b.a.a.a.b.d	ENSGT00940000157644.m.a.b	ENSGT00940000165549.c	ENSGT00990000208651.c.b	ENSGT00940000154417.c.c	ENSGT00940000158938.a.b	ENSGT00390000004940.a.b.j.a.a	ENSGT00390000012141.b.g	ENSGT00940000162826.d	ENSGT01050000244971.B.b.d	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a.d.a.a	ENSGT00390000000911.h.a.d.b	ENSGT00390000001206.c.a	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a.a #23	ENSGT00950000182888.a.a.a.g.b.b.a	ENSGT00950000182888.a.a.a.g.b.b.b	ENSGT00510000046843.a.b.k.c	ENSGT00950000183003.a.b.c.b	ENSGT00940000165935.d.a	ENSGT00940000166581.b	ENSGT00950000182879.a.a.c.b	ENSGT00950000182879.a.a.d.a	ENSGT01050000244939.a.a.b.a.b.c.a.a.b.a	ENSGT00950000182963.b.a.c.a	ENSGT00940000158080.k	ENSGT00940000160862	ENSGT00940000165797.e	ENSGT00940000159567.a.b.a
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	12	ENSSGRG00000024585	HIPK1 (ENSSGRG00000024586)	ube2j2 (ENSSGRG00000024588)	ACAP3 (ENSSGRG00000024622)	ints11 (ENSSGRG00000026652)	cptp (ENSSGRG00000027308)	ubxn10 (ENSSGRG00000027310)	ddx19a (ENSSGRG00000027318)	ENSSGRG00000028176	VWA5B1 (ENSSGRG00000028177)	CAMK2N1 (ENSSGRG00000028179)	mul1b (ENSSGRG00000028180)	ENSSGRG00000028183	ENSSGRG00000028185	cdaa (ENSSGRG00000028188)	agmat (ENSSGRG00000028193) #22	DNAJC16 (ENSSGRG00000028195) #23	ENSSGRG00000028196	tor1l3 (ENSSGRG00000028197)	PLEKHG5 (ENSSGRG00000028199)	ENSSGRG00000028201	irx7 (ENSSGRG00000028202)	cd40 (ENSSGRG00000028203)	ENSSGRG00000028207	ENSSGRG00000028213	NHS (ENSSGRG00000028218)	ENSSGRG00000028220	ENSSGRG00000028221	ENSSGRG00000028222	rnf146 (ENSSGRG00000028224)	SOGA3 (ENSSGRG00000028226)
Golden-line barbel	MODERN SPECIES	2795																agmat (ENSSGRG00000012068) #22	DNAJC16 (ENSSGRG00000012069) #23
Common carp reference	MODERN SPECIES	49	ENSCCRG00000041778	ube2j2 (ENSCCRG00000041783)	ACAP3 (ENSCCRG00000024019)	ENSCCRG00000069861	ints11 (ENSCCRG00000023890)	cptp (ENSCCRG00000077753)	ENSCCRG00000082213	ddx19a (ENSCCRG00000004649)	VWA5B1 (ENSCCRG00000063965)	mul1b (ENSCCRG00000044722)	fam43b (ENSCCRG00000053024)	ENSCCRG00000004822	ENSCCRG00000063521	cdaa (ENSCCRG00000081555)	pink1 (ENSCCRG00000031337)	agmat (ENSCCRG00000050467) #22	ENSCCRG00000050482 #23	tor1l1 (ENSCCRG00000031360)	tor1l1 (ENSCCRG00000064225)	ENSCCRG00000074156	ENSCCRG00000054445	irx7 (ENSCCRG00000025619)	cd40 (ENSCCRG00000025626)	ENSCCRG00000065240	ENSCCRG00000042177	ENSCCRG00000038080	ENSCCRG00000064137	ENSCCRG00000068673	ENSCCRG00000079390	cltrn (ENSCCRG00000004569)	ENSCCRG00000004589
Zebrafish	MODERN SPECIES	15	MARCHF9 (ENSDARG00000055740)	ENSDARG00000063594	ube2j2 (ENSDARG00000061161)	ACAP3 (ENSDARG00000075990)	ints11 (ENSDARG00000025212)	cptp (ENSDARG00000052537)	ubxn10 (ENSDARG00000052535)	ddx19a (ENSDARG00000044325)	ENSDARG00000059705	mul1b (ENSDARG00000052527)	fam43b (ENSDARG00000070222)	ENSDARG00000116457	ENSDARG00000038891	cdaa (ENSDARG00000111188)	pink1 (ENSDARG00000001929)	agmat (ENSDARG00000059700) #22	DNAJC16 (ENSDARG00000059699) #23	tor1l1 (ENSDARG00000055856)	ENSDARG00000090741	tor1l3 (ENSDARG00000026895)	PLEKHG5 (ENSDARG00000101752)	irx7 (ENSDARG00000002601)	cd40 (ENSDARG00000054968)	cbln4 (ENSDARG00000061240)	PFDN4 (ENSDARG00000061228)	zgc:112994 (ENSDARG00000026296)	znf217 (ENSDARG00000088123)	ENSDARG00000113348	TSHZ2 (ENSDARG00000079201)	ZFP64 (ENSDARG00000061147)	sall4 (ENSDARG00000044485)
Clupeiformes	ANCESTRAL SPECIES	81	ENSGT00940000156199.a.b	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000012141.b	ENSGT00940000176941	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911.h.a	ENSGT00390000000911.h.b.a	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00940000159698 #24	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT01030000235094	ENSGT00390000013978.d	ENSGT00940000164771.b	ENSGT00390000012948.b	ENSGT00390000009842	ENSGT00940000156211.b	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00390000004735.C
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	1	ENSDCDG00000030240	ints11 (ENSDCDG00000030251)	ENSDCDG00000030267	cptp (ENSDCDG00000030270)	ddx19a (ENSDCDG00000030295)	ENSDCDG00000030341	ENSDCDG00000030345	ENSDCDG00000030346	mul1b (ENSDCDG00000030350)	ENSDCDG00000030352	fam43b (ENSDCDG00000030353)	ENSDCDG00000030364	ENSDCDG00000030540	CDA (ENSDCDG00000030541)	pink1 (ENSDCDG00000030545)	agmat (ENSDCDG00000030547) #22	casp9 (ENSDCDG00000030560) #24	nemp1 (ENSDCDG00000030569)	ormdl2 (ENSDCDG00000030585)	HIPK1 (ENSDCDG00000030589)	ube2j2 (ENSDCDG00000030591)	ACAP3 (ENSDCDG00000030628)	ENSDCDG00000031534	ddx19a (ENSDCDG00000031536)	ENSDCDG00000031540	ENSDCDG00000031543	ENSDCDG00000031546	ENSDCDG00000031549	fam43b (ENSDCDG00000031551)	ENSDCDG00000031571	ENSDCDG00000031800
Denticle herring	MODERN SPECIES	1	ormdl2 (ENSDCDG00000030585)	HIPK1 (ENSDCDG00000030589)	ube2j2 (ENSDCDG00000030591)	ACAP3 (ENSDCDG00000030628)	ENSDCDG00000031534	ddx19a (ENSDCDG00000031536)	ENSDCDG00000031540	ENSDCDG00000031543	ENSDCDG00000031546	ENSDCDG00000031549	fam43b (ENSDCDG00000031551)	ENSDCDG00000031571	ENSDCDG00000031800	CDA (ENSDCDG00000031811)	pink1 (ENSDCDG00000031862)	agmat (ENSDCDG00000031866) #22	ENSDCDG00000031879	PAN2 (ENSDCDG00000031883)	plagx (ENSDCDG00000031888)	trappc6b (ENSDCDG00000031893)	tpx2 (ENSDCDG00000031899)	ENSDCDG00000031905	ENSDCDG00000031908	ENSDCDG00000031910	ENSDCDG00000031913	plpbp (ENSDCDG00000031916)	tmed4 (ENSDCDG00000031922)	fam50a (ENSDCDG00000031928)	ENSDCDG00000031939	sars1 (ENSDCDG00000031944)	ENSDCDG00000031948
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	20	ACAP3 (ENSCHAG00000027379)	ENSCHAG00000027517	ints11 (ENSCHAG00000027520)	cptp (ENSCHAG00000027527)	cptp (ENSCHAG00000027528)	ubxn10 (ENSCHAG00000027530)	ddx19a (ENSCHAG00000027535)	CAMK2N1 (ENSCHAG00000000119)	mul1b (ENSCHAG00000000124)	fam43b (ENSCHAG00000000136)	ENSCHAG00000000149	ENSCHAG00000000200	cdaa (ENSCHAG00000000214)	pink1 (ENSCHAG00000000230)	agmat (ENSCHAG00000000265) #22	agmat (ENSCHAG00000000316) #22	DNAJC16 (ENSCHAG00000000392) #23	casp9 (ENSCHAG00000000630) #24	nemp1 (ENSCHAG00000000986)	ormdl2 (ENSCHAG00000001057)	ENSCHAG00000001083	ENSCHAG00000001098	PAN2 (ENSCHAG00000001224)	plagx (ENSCHAG00000001430)	trappc6b (ENSCHAG00000001448)	tpx2 (ENSCHAG00000001544)	ENSCHAG00000002510	ENSCHAG00000002771	snrpg (ENSCHAG00000002799)	plpbp (ENSCHAG00000002908)	tmed4 (ENSCHAG00000003764)
Atlantic herring	MODERN SPECIES	20	ube2j2 (ENSCHAG00000027342)	ACAP3 (ENSCHAG00000027379)	ENSCHAG00000027517	ints11 (ENSCHAG00000027520)	cptp (ENSCHAG00000027527)	cptp (ENSCHAG00000027528)	ubxn10 (ENSCHAG00000027530)	ddx19a (ENSCHAG00000027535)	CAMK2N1 (ENSCHAG00000000119)	mul1b (ENSCHAG00000000124)	fam43b (ENSCHAG00000000136)	ENSCHAG00000000149	ENSCHAG00000000200	cdaa (ENSCHAG00000000214)	pink1 (ENSCHAG00000000230)	agmat (ENSCHAG00000000265) #22	agmat (ENSCHAG00000000316) #22	DNAJC16 (ENSCHAG00000000392) #23	casp9 (ENSCHAG00000000630) #24	nemp1 (ENSCHAG00000000986)	ormdl2 (ENSCHAG00000001057)	ENSCHAG00000001083	ENSCHAG00000001098	PAN2 (ENSCHAG00000001224)	plagx (ENSCHAG00000001430)	trappc6b (ENSCHAG00000001448)	tpx2 (ENSCHAG00000001544)	ENSCHAG00000002510	ENSCHAG00000002771	snrpg (ENSCHAG00000002799)	plpbp (ENSCHAG00000002908)
Osteoglossiformes	ANCESTRAL SPECIES	118	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT01100000263537.b.a.a.a.b	ENSGT00940000157644	ENSGT00940000165549	ENSGT00390000012939	ENSGT01060000249781	ENSGT00940000154417.c	ENSGT00940000158938	ENSGT00390000004940.a.b	ENSGT00940000162826	ENSGT01050000244971.B.b	ENSGT01050000244971.A.d.a.b	ENSGT00390000000911	ENSGT00390000001206	ENSGT00950000183195.a #22	ENSGT00940000155851.c.a #23	ENSGT00940000159698 #24	ENSGT00940000156670	ENSGT00940000154169.B	ENSGT00940000157871.i	ENSGT00940000158791	ENSGT00940000156496.a.b	ENSGT00390000001969.a	ENSGT00940000167346	ENSGT00990000203827	ENSGT00940000164219	ENSGT00390000008414.h	ENSGT01050000244850.C.b.u.b.f
Asian bonytongue	MODERN SPECIES	10	ENSSFOG00015032250	UBE2J2 (ENSSFOG00015024500)	acap3b (ENSSFOG00015020676)	ENSSFOG00015032122	ints11 (ENSSFOG00015020610)	cptp (ENSSFOG00015026523)	ubxn10 (ENSSFOG00015020582)	ENSSFOG00015020572	ddx19a (ENSSFOG00015020543)	VWA5B1 (ENSSFOG00015020524)	camk2n1 (ENSSFOG00015020505)	fam43b (ENSSFOG00015020495)	ENSSFOG00015017593	cdab (ENSSFOG00015029652)	pink1 (ENSSFOG00015017241)	agmat (ENSSFOG00015017225) #22	DNAJC16 (ENSSFOG00015017141) #23	casp9 (ENSSFOG00015017081) #24	HSPG2 (ENSSFOG00015016935)	tmem269 (ENSSFOG00015032484)	LRIG2 (ENSSFOG00015016889)	MAGI3 (ENSSFOG00015016839)	RSBN1 (ENSSFOG00015026338)	ENSSFOG00015028661	ENSSFOG00015016695	ENSSFOG00015016676	ENSSFOG00015016596	ENSSFOG00015016564	ENSSFOG00015016551	ENSSFOG00015016542	HDAC7 (ENSSFOG00015016447)
P. kingsleyae	MODERN SPECIES	3	ube2j2 (ENSPKIG00000007880)	acap3b (ENSPKIG00000007957)	ints11 (ENSPKIG00000008091)	ENSPKIG00000008142	cptp (ENSPKIG00000008154)	ubxn10 (ENSPKIG00000008174)	ddx19a (ENSPKIG00000008220)	ENSPKIG00000008297	VWA5B1 (ENSPKIG00000008315)	camk2n1 (ENSPKIG00000008363)	fam43b (ENSPKIG00000008376)	ENSPKIG00000008392	ENSPKIG00000008418	CDA (ENSPKIG00000008437)	pink1 (ENSPKIG00000008461)	agmat (ENSPKIG00000008505) #22	DNAJC16 (ENSPKIG00000008526) #23	ENSPKIG00000008550 #24	casp9 (ENSPKIG00000008565) #24	ENSPKIG00000008591	HSPG2 (ENSPKIG00000009289)	tmem269 (ENSPKIG00000010608)	ENSPKIG00000010649	LRIG2 (ENSPKIG00000010678)	MAGI3 (ENSPKIG00000010759)	RSBN1 (ENSPKIG00000010868)	ptpn22 (ENSPKIG00000010916)	ENSPKIG00000010999	ENSPKIG00000011036	ENSPKIG00000011078	PLXNA2 (ENSPKIG00000011112)
Elephant shark	MODERN SPECIES	1668	ENSCMIG00000008063	tmem269 (ENSCMIG00000008059)	ENSCMIG00000008054	ENSCMIG00000008052	ENSCMIG00000008049	ENSCMIG00000008042	ENSCMIG00000008039	EPHA8 (ENSCMIG00000007931)	ENSCMIG00000007892	C1QB (ENSCMIG00000007888)	c1qb (ENSCMIG00000007887)	ephb2b (ENSCMIG00000007877)	LACTBL1 (ENSCMIG00000007871)	slc66a1 (ENSCMIG00000007870)	pink1 (ENSCMIG00000007846)	agmat (ENSCMIG00000007826) #22	DNAJC16 (ENSCMIG00000007804) #23	casp9 (ENSCMIG00000007799) #24	ddost (ENSCMIG00000007788)	ddi2 (ENSCMIG00000007782)	FBXO42 (ENSCMIG00000007778) #8	cplane2 (ENSCMIG00000007776) #9	ENSCMIG00000007774	ARHGEF19 (ENSCMIG00000007770) #10	ENSCMIG00000007766 ##10	EPHA2 (ENSCMIG00000007634) #11
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000183195.a #22
Hagfish	MODERN SPECIES	1070	ENSEBUG00000004971	sod1 (ENSEBUG00000013315)	ENSEBUG00000016450	ENSEBUG00000003464	ENSEBUG00000012345	ACKR3 (ENSEBUG00000011866)	ENSEBUG00000007944	tlcd2 (ENSEBUG00000002381)	zgc:112255 (ENSEBUG00000005610)	tpi1b (ENSEBUG00000016610)	spsb1 (ENSEBUG00000015395)	nadkb (ENSEBUG00000002916)	rps6 (ENSEBUG00000011139)	ENSEBUG00000001134	ENSEBUG00000013248	agmat (ENSEBUG00000015533) #22	ENSEBUG00000011450	ENSEBUG00000004844	ENSEBUG00000009330