Glires	ANCESTRAL SPECIES		ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748 #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553
Rodentia	ANCESTRAL SPECIES		ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748 #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.f	ENSGT01030000234531.A.b.b.b.e.b
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748 #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.e.b
Myomorpha	ANCESTRAL SPECIES	3	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748.f #11	ENSGT00940000158748.e #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.e.b
Muroidea	ANCESTRAL SPECIES	3	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748.f #11	ENSGT00940000158748.e #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a.b	ENSGT01030000234531.A.b.b.b.e.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	1803	Cplane2 (ENSNGAG00000015230) #7	Arhgef19 (ENSNGAG00000018558) #8	Epha2 (ENSNGAG00000014151) #9	Fam131c (ENSNGAG00000011458) #10	Clcnka (ENSNGAG00000015479) #11	Clcnkb (ENSNGAG00000006923) #12	Hspb7 (ENSNGAG00000015943) #13	Zbtb17 (ENSNGAG00000000614) #14	Spen (ENSNGAG00000000641) #15	Fblim1 (ENSNGAG00000017164) #16	Tmem82 (ENSNGAG00000020347) #17	Slc25a34 (ENSNGAG00000019484) #18	Plekhm2 (ENSNGAG00000018802) #19	ENSNGAG00000011605 #20	ENSNGAG00000008573 #21	Agmat (ENSNGAG00000006410) #22	Dnajc16 (ENSNGAG00000013158) #23	Casp9 (ENSNGAG00000003405) #24	Cela2a (ENSNGAG00000019296) #25	ENSNGAG00000020581 #26	Efhd2 (ENSNGAG00000018634) #27	Fhad1 (ENSNGAG00000002450) #28	Tmem51 (ENSNGAG00000012512) #29	ENSNGAG00000018275 #30	ENSNGAG00000013647 #31
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748.f #11	ENSGT00940000158748.e #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b
Cricetidae	ANCESTRAL SPECIES	2	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748.f #11	ENSGT00940000158748.e #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.a.b
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748.f #11	ENSGT00940000158748.e #12	ENSGT00390000010674 #13	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b
Prairie vole	MODERN SPECIES	1	Szrd1 (ENSMOCG00000014138)	Fbxo42 (ENSMOCG00000021880)	Cplane2 (ENSMOCG00000011402) #7	Arhgef19 (ENSMOCG00000015816) #8	Epha2 (ENSMOCG00000015770) #9	Fam131c (ENSMOCG00000022229) #10	Clcnka (ENSMOCG00000012067) #11	Clcnkb (ENSMOCG00000016948) #12	Hspb7 (ENSMOCG00000015401) #13	Zbtb17 (ENSMOCG00000005017) #14	Spen (ENSMOCG00000016083) #15	Tmem82 (ENSMOCG00000004076) #17	Slc25a34 (ENSMOCG00000001770) #18	Plekhm2 (ENSMOCG00000016353) #19	ENSMOCG00000008741 #21	Agmat (ENSMOCG00000006579) #22	Dnajc16 (ENSMOCG00000018345) #23	Casp9 (ENSMOCG00000020323) #24	Cela2a (ENSMOCG00000019141) #25	ENSMOCG00000006919 #26	Efhd2 (ENSMOCG00000002945) #27	Fhad1 (ENSMOCG00000015308) #28	Tmem51 (ENSMOCG00000009847) #29	ENSMOCG00000007192 #31	ENSMOCG00000002830 #31	ENSMOCG00000021077	ENSMOCG00000018838	ENSMOCG00000015618	Lrrc38 (ENSMOCG00000014237)	ENSMOCG00000016039	Gpr82 (ENSMOCG00000003874)
Northern American deer mouse	MODERN SPECIES	11	Cplane2 (ENSPEMG00000025447) #7	Arhgef19 (ENSPEMG00000023456) #8	Epha2 (ENSPEMG00000023679) #9	Fam131c (ENSPEMG00000013548) #10	Clcnka (ENSPEMG00000000336) #11	Clcnkb (ENSPEMG00000014383) #12	Hspb7 (ENSPEMG00000026381) #13	Zbtb17 (ENSPEMG00000021923) #14	Spen (ENSPEMG00000022997) #15	Fblim1 (ENSPEMG00000022333) #16	Tmem82 (ENSPEMG00000021877) #17	Slc25a34 (ENSPEMG00000009951) #18	Plekhm2 (ENSPEMG00000024198) #19	ENSPEMG00000029595 #20	ENSPEMG00000021491 #21	Agmat (ENSPEMG00000022206) #22	Dnajc16 (ENSPEMG00000023576) #23	Casp9 (ENSPEMG00000022246) #24	Cela2a (ENSPEMG00000023249) #25	ENSPEMG00000009764 #25	Efhd2 (ENSPEMG00000001500) #27	Fhad1 (ENSPEMG00000005222) #28	Tmem51 (ENSPEMG00000031341) #29	Kazn (ENSPEMG00000021311) #31	ENSPEMG00000028452 ##31	Prdm2 (ENSPEMG00000023130)	Pdpn (ENSPEMG00000007524)	Lrrc38 (ENSPEMG00000027448)	Pramel1 (ENSPEMG00000021753)	ENSPEMG00000025426	Pramel12 (ENSPEMG00000023636)
Cricetinae	ANCESTRAL SPECIES	5	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748.f #11	ENSGT00940000158748.e #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.b.a	ENSGT01030000234531.A.b.b.b.e.b
Chinese hamster chok1gshd	MODERN SPECIES	111	Cplane2 (ENSCGRG00001019934) #7	Arhgef19 (ENSCGRG00001019303) #8	Epha2 (ENSCGRG00001017870) #9	Fam131c (ENSCGRG00001016101) #10	Clcnka (ENSCGRG00001008237) #11	Clcnkb (ENSCGRG00001017765) #12	Hspb7 (ENSCGRG00001015438) #13	Srarp (ENSCGRG00001024454)	Zbtb17 (ENSCGRG00001019408) #14	Spen (ENSCGRG00001007725) #15	Fblim1 (ENSCGRG00001024160) #16	Tmem82 (ENSCGRG00001022720) #17	Slc25a34 (ENSCGRG00001021299) #18	Plekhm2 (ENSCGRG00001011209) #19	ENSCGRG00001024250 #20	Agmat (ENSCGRG00001022077) #22	Dnajc16 (ENSCGRG00001019382) #23	Casp9 (ENSCGRG00001012293) #24	ENSCGRG00001024391 #25	ENSCGRG00001018143 #26	Efhd2 (ENSCGRG00001016692) #27	Fhad1 (ENSCGRG00001024955) #28	ENSCGRG00001024256 #31	Tmem51 (ENSCGRG00001023938) #29	ENSCGRG00001022553 #31	Prdm2 (ENSCGRG00001020470)	Pdpn (ENSCGRG00001019750)	Lrrc38 (ENSCGRG00001015382)	Pramel1 (ENSCGRG00001003207)	Pramel12 (ENSCGRG00001024998)	Pramel15 (ENSCGRG00001024569)
Golden Hamster	MODERN SPECIES	726	Fbxo42 (ENSMAUG00000018977)	Cplane2 (ENSMAUG00000020921) #7	Arhgef19 (ENSMAUG00000021130) #8	Epha2 (ENSMAUG00000009598) #9	Fam131c (ENSMAUG00000021505) #10	Clcnka (ENSMAUG00000017605) #11	Clcnkb (ENSMAUG00000000874) #12	Hspb7 (ENSMAUG00000010732) #13	Zbtb17 (ENSMAUG00000001376) #14	Spen (ENSMAUG00000008318) #15	Fblim1 (ENSMAUG00000018139) #16	Tmem82 (ENSMAUG00000007567) #17	Slc25a34 (ENSMAUG00000020022) #18	Plekhm2 (ENSMAUG00000010838) #19	ENSMAUG00000020325 #21	Agmat (ENSMAUG00000022247) #22	Dnajc16 (ENSMAUG00000021653) #23	Casp9 (ENSMAUG00000014326) #24	Cela2a (ENSMAUG00000010885) #25	ENSMAUG00000007283 #26	Efhd2 (ENSMAUG00000001147) #27	Fhad1 (ENSMAUG00000001064) #28	Tmem51 (ENSMAUG00000007940) #29	ENSMAUG00000010094 #31	ENSMAUG00000009108 #31	Prdm2 (ENSMAUG00000017021)	Pdpn (ENSMAUG00000013176)	Lrrc38 (ENSMAUG00000019684)	Pramel1 (ENSMAUG00000017344)	Pramel12 (ENSMAUG00000013165)
Murinae	ANCESTRAL SPECIES	2	ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748.f #11	ENSGT00940000158748.e #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b
Mus	ANCESTRAL SPECIES	3	ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748.f #11	ENSGT00940000158748.e #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b
Mus_A	ANCESTRAL SPECIES	3	ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748.f #11	ENSGT00940000158748.e #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748.f #11	ENSGT00940000158748.e #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748.f #11	ENSGT00940000158748.e #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.a.a
Steppe mouse	MODERN SPECIES	3329	Cplane2 (ENSMSIG00000013945) #7	Arhgef19 (ENSMSIG00000013963) #8	Epha2 (ENSMSIG00000014018) #9	Fam131c (ENSMSIG00000014039) #10	Clcnka (ENSMSIG00000014055) #11	Clcnkb (ENSMSIG00000014099) #12	Hspb7 (ENSMSIG00000014140) #13	Srarp (ENSMSIG00000014155)	Zbtb17 (ENSMSIG00000014168) #14	Spen (ENSMSIG00000014208) #15	Fblim1 (ENSMSIG00000014313) #16	Tmem82 (ENSMSIG00000014350) #17	Slc25a34 (ENSMSIG00000014377) #18	Plekhm2 (ENSMSIG00000014394) #19	ENSMSIG00000014561 #20	Agmat (ENSMSIG00000014614) #22	Dnajc16 (ENSMSIG00000014635) #23	Casp9 (ENSMSIG00000014653) #24	Cela2a (ENSMSIG00000014686) #25	ENSMSIG00000014707 #26	Efhd2 (ENSMSIG00000014750) #27	Fhad1 (ENSMSIG00000014775) #28	Tmem51 (ENSMSIG00000015190) #29	ENSMSIG00000015199	Kazn (ENSMSIG00000015206) #31	ENSMSIG00000015235 ##31	Prdm2 (ENSMSIG00000015257)	ENSMSIG00000015307	Pdpn (ENSMSIG00000015317)	ENSMSIG00000015393	Pramel1 (ENSMSIG00000015411)
spretus	MODERN SPECIES	13	Cplane2 (MGP_SPRETEiJ_G0027716) #7	Arhgef19 (MGP_SPRETEiJ_G0027717) #8	Epha2 (MGP_SPRETEiJ_G0027718) #9	Fam131c (MGP_SPRETEiJ_G0027719) #10	Clcnka (MGP_SPRETEiJ_G0027720) #11	Clcnkb (MGP_SPRETEiJ_G0027721) #12	Hspb7 (MGP_SPRETEiJ_G0027722) #13	Zbtb17 (MGP_SPRETEiJ_G0027723) #14	Spen (MGP_SPRETEiJ_G0027724) #15	Fblim1 (MGP_SPRETEiJ_G0027725) #16	Tmem82 (MGP_SPRETEiJ_G0027726) #17	Slc25a34 (MGP_SPRETEiJ_G0027727) #18	Plekhm2 (MGP_SPRETEiJ_G0027728) #19	MGP_SPRETEiJ_G0027729 #20	MGP_SPRETEiJ_G0027730 #20	Agmat (MGP_SPRETEiJ_G0027731) #22	Dnajc16 (MGP_SPRETEiJ_G0027732) #23	Casp9 (MGP_SPRETEiJ_G0027733) #24	Cela2a (MGP_SPRETEiJ_G0027734) #25	MGP_SPRETEiJ_G0027735	Efhd2 (MGP_SPRETEiJ_G0027736) #27	Fhad1 (MGP_SPRETEiJ_G0027737) #28	Tmem51 (MGP_SPRETEiJ_G0027738) #29	Kazn (MGP_SPRETEiJ_G0027739) #31	Prdm2 (MGP_SPRETEiJ_G0027740)	Pdpn (MGP_SPRETEiJ_G0027741)	Lrrc38 (MGP_SPRETEiJ_G0027742)	Pramel1 (MGP_SPRETEiJ_G0027743)	Pramel12 (MGP_SPRETEiJ_G0027744)	Oog4 (MGP_SPRETEiJ_G0027745)	MGP_SPRETEiJ_G0027746
Mouse	MODERN SPECIES	13	Arhgef19 (ENSMUSG00000028919) #8	Epha2 (ENSMUSG00000006445) #9	Fam131c (ENSMUSG00000006218) #10	Clcnka (ENSMUSG00000033770) #11	Clcnkb (ENSMUSG00000006216) #12	Hspb7 (ENSMUSG00000006221) #13	Srarp (ENSMUSG00000070637)	Zbtb17 (ENSMUSG00000006215) #14	Spen (ENSMUSG00000040761) #15	Fblim1 (ENSMUSG00000006219) #16	Tmem82 (ENSMUSG00000043085) #17	Slc25a34 (ENSMUSG00000040740) #18	Plekhm2 (ENSMUSG00000028917) #19	Ddi2 (ENSMUSG00000078515) #20	Rsc1a1 (ENSMUSG00000040715) #20	Agmat (ENSMUSG00000040706) #22	Dnajc16 (ENSMUSG00000040697) #23	Casp9 (ENSMUSG00000028914) #24	Cela2a (ENSMUSG00000058579) #25	Ctrc (ENSMUSG00000062478)	Efhd2 (ENSMUSG00000040659) #27	Fhad1 (ENSMUSG00000051435) #28	Tmem51 (ENSMUSG00000040616) #29	Kazn (ENSMUSG00000040606) #31	6330411D24Rik (ENSMUSG00000110067)	Prdm2 (ENSMUSG00000057637)	Pdpn (ENSMUSG00000028583)	Lrrc38 (ENSMUSG00000028584)	Pramel1 (ENSMUSG00000041805)	Pramel12 (ENSMUSG00000046862)	Oog4 (ENSMUSG00000047799)
Ryukyu mouse	MODERN SPECIES	13	MGP_CAROLIEiJ_G0026737	Epha2 (MGP_CAROLIEiJ_G0026738) #9	Fam131c (MGP_CAROLIEiJ_G0026739) #10	Clcnka (MGP_CAROLIEiJ_G0026740) #11	Clcnkb (MGP_CAROLIEiJ_G0026741) #12	Hspb7 (MGP_CAROLIEiJ_G0026742) #13	Srarp (MGP_CAROLIEiJ_G0026743)	Zbtb17 (MGP_CAROLIEiJ_G0026744) #14	Spen (MGP_CAROLIEiJ_G0026745) #15	Fblim1 (MGP_CAROLIEiJ_G0026746) #16	Tmem82 (MGP_CAROLIEiJ_G0026747) #17	Slc25a34 (MGP_CAROLIEiJ_G0026748) #18	Plekhm2 (MGP_CAROLIEiJ_G0026749) #19	MGP_CAROLIEiJ_G0026750 #20	MGP_CAROLIEiJ_G0026751 #20	Agmat (MGP_CAROLIEiJ_G0026752) #22	Dnajc16 (MGP_CAROLIEiJ_G0026753) #23	MGP_CAROLIEiJ_G0026754 #24	MGP_CAROLIEiJ_G0026755	Efhd2 (MGP_CAROLIEiJ_G0026756) #27	Fhad1 (MGP_CAROLIEiJ_G0026757) #28	Tmem51 (MGP_CAROLIEiJ_G0026758) #29	Kazn (MGP_CAROLIEiJ_G0026759) #31	Prdm2 (MGP_CAROLIEiJ_G0026760)	Pdpn (MGP_CAROLIEiJ_G0026761)	Lrrc38 (MGP_CAROLIEiJ_G0026762)	Pramel1 (MGP_CAROLIEiJ_G0026763)	Pramel12 (MGP_CAROLIEiJ_G0026764)	Oog4 (MGP_CAROLIEiJ_G0026765)	MGP_CAROLIEiJ_G0026766	MGP_CAROLIEiJ_G0026767
Shrew mouse	MODERN SPECIES	19	MGP_PahariEiJ_G0029068	Epha2 (MGP_PahariEiJ_G0029069) #9	Fam131c (MGP_PahariEiJ_G0029070) #10	Clcnka (MGP_PahariEiJ_G0029071) #11	Clcnkb (MGP_PahariEiJ_G0029072) #12	Hspb7 (MGP_PahariEiJ_G0029073) #13	MGP_PahariEiJ_G0029074	Zbtb17 (MGP_PahariEiJ_G0029075) #14	Spen (MGP_PahariEiJ_G0029076) #15	Fblim1 (MGP_PahariEiJ_G0029077) #16	Tmem82 (MGP_PahariEiJ_G0029078) #17	Slc25a34 (MGP_PahariEiJ_G0029079) #18	Plekhm2 (MGP_PahariEiJ_G0029080) #19	MGP_PahariEiJ_G0029081 #20	MGP_PahariEiJ_G0029082 #20	Agmat (MGP_PahariEiJ_G0029083) #22	Dnajc16 (MGP_PahariEiJ_G0029084) #23	Casp9 (MGP_PahariEiJ_G0029085) #24	Cela2a (MGP_PahariEiJ_G0029086) #25	MGP_PahariEiJ_G0029087	Efhd2 (MGP_PahariEiJ_G0029088) #27	Fhad1 (MGP_PahariEiJ_G0029089) #28	Tmem51 (MGP_PahariEiJ_G0029090) #29	Kazn (MGP_PahariEiJ_G0029091) #31	Prdm2 (MGP_PahariEiJ_G0029092)	Pdpn (MGP_PahariEiJ_G0029093)	Lrrc38 (MGP_PahariEiJ_G0029094)	Pramel1 (MGP_PahariEiJ_G0029095)	Pramel12 (MGP_PahariEiJ_G0029096)	MGP_PahariEiJ_G0029097	MGP_PahariEiJ_G0029098
Rat	MODERN SPECIES	15	Cplane2 (ENSRNOG00000023346) #7	Arhgef19 (ENSRNOG00000047967) #8	Epha2 (ENSRNOG00000009222) #9	Rps27a-ps2 (ENSRNOG00000051047)	Fam131c (ENSRNOG00000023008) #10	Clcnka (ENSRNOG00000052368) #11	Clcnkb (ENSRNOG00000009897) #12	Hspb7 (ENSRNOG00000029079) #13	AC120594.1 (ENSRNOG00000054155)	Zbtb17 (ENSRNOG00000010436) #14	Spen (ENSRNOG00000033556) #15	Fblim1 (ENSRNOG00000011774) #16	Tmem82 (ENSRNOG00000011970) #17	Plekhm2 (ENSRNOG00000012163) #19	Ddi2 (ENSRNOG00000012274) #20	Agmat (ENSRNOG00000012315) #22	Dnajc16 (ENSRNOG00000012503) #23	Casp9 (ENSRNOG00000012944) #24	Cela2a (ENSRNOG00000013628) #25	Ctrc (ENSRNOG00000013745) #26	Efhd2 (ENSRNOG00000013783) #27	Fhad1 (ENSRNOG00000028064) #28	Tmem51 (ENSRNOG00000014197) #29	ENSRNOG00000070661	Kazn (ENSRNOG00000014322) #31	6330411D24Rik (ENSRNOG00000065736)	Prdm2 (ENSRNOG00000033522)	LOC100359951 (ENSRNOG00000071148)	ENSRNOG00000070725	Pdpn (ENSRNOG00000014961)	Lrrc38 (ENSRNOG00000015264)
Lesser Egyptian jerboa	MODERN SPECIES	63	Epha2 (ENSJJAG00000009210) #9	Fam131c (ENSJJAG00000020340) #10	Clcnka (ENSJJAG00000022871) #11	Clcnkb (ENSJJAG00000011382) #12	Hspb7 (ENSJJAG00000022470) #13	ENSJJAG00000014068	ENSJJAG00000007887	Zbtb17 (ENSJJAG00000008918) #14	Spen (ENSJJAG00000010882) #15	Fblim1 (ENSJJAG00000013123) #16	Tmem82 (ENSJJAG00000011441) #17	Slc25a34 (ENSJJAG00000001837) #18	Plekhm2 (ENSJJAG00000009735) #19	ENSJJAG00000002222 #20	ENSJJAG00000008758 #21	Agmat (ENSJJAG00000000771) #22	Dnajc16 (ENSJJAG00000007639) #23	ENSJJAG00000010832	Cela2a (ENSJJAG00000012004) #25	ENSJJAG00000011961 #26	Efhd2 (ENSJJAG00000005238) #27	Fhad1 (ENSJJAG00000011545) #28	Tmem51 (ENSJJAG00000007750) #29	Kazn (ENSJJAG00000013027) #31	Prdm2 (ENSJJAG00000013245)	Pdpn (ENSJJAG00000011298)	Lrrc38 (ENSJJAG00000010300)	ENSJJAG00000007952	ENSJJAG00000011316	ENSJJAG00000013886	Cfap107 (ENSJJAG00000012706)
Kangaroo rat	MODERN SPECIES	380					ENSDORG00000029189 #12	ENSDORG00000023186 #12	Hspb7 (ENSDORG00000009697) #13	Zbtb17 (ENSDORG00000008306) #14	Spen (ENSDORG00000023909) #15	Fblim1 (ENSDORG00000002591) #16	Tmem82 (ENSDORG00000008854) #17	Slc25a34 (ENSDORG00000008853) #18	Plekhm2 (ENSDORG00000008849) #19	ENSDORG00000027846 #20	ENSDORG00000012305 #21	Agmat (ENSDORG00000003970) #22	Dnajc16 (ENSDORG00000003972) #23	ENSDORG00000003973	Cela2a (ENSDORG00000006593) #25	ENSDORG00000016574 #26	Efhd2 (ENSDORG00000026861) #27	Fhad1 (ENSDORG00000005392) #28	Tmem51 (ENSDORG00000015453) #29	ENSDORG00000023515 #31	ENSDORG00000016542 #31	Prdm2 (ENSDORG00000012558)	ENSDORG00000011209	Yipf1 (ENSDORG00000015262)	Dio1 (ENSDORG00000015264)	Hspb11 (ENSDORG00000015267)	Lrrc42 (ENSDORG00000004216)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748 #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00390000002770	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.f	ENSGT01030000234531.A.b.b.b.e.b
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748 #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.f.b.b	ENSGT00390000014553	ENSGT00940000162160
Marmotini	ANCESTRAL SPECIES		ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748 #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.c
Marmotini_b	ANCESTRAL SPECIES		ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748 #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000154570.a.b ##31	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.c
Squirrel	MODERN SPECIES	74	ARHGEF19 (ENSSTOG00000026824) #8	EPHA2 (ENSSTOG00000003080) #9	FAM131C (ENSSTOG00000026095) #10	ENSSTOG00000022083 #12	HSPB7 (ENSSTOG00000028972) #13	SRARP (ENSSTOG00000015599)	ZBTB17 (ENSSTOG00000005696) #14	SPEN (ENSSTOG00000021428) #15	ENSSTOG00000029207	FBLIM1 (ENSSTOG00000028645) #16	TMEM82 (ENSSTOG00000025954) #17	SLC25A34 (ENSSTOG00000013833) #18	PLEKHM2 (ENSSTOG00000013821) #19	RSC1A1 (ENSSTOG00000025982) #20	DDI2 (ENSSTOG00000019447) #21	AGMAT (ENSSTOG00000013813) #22	DNAJC16 (ENSSTOG00000013804) #23	ENSSTOG00000028042	ENSSTOG00000021532 #25	ENSSTOG00000032931 #26	EFHD2 (ENSSTOG00000025403) #27	FHAD1 (ENSSTOG00000023646) #28	TMEM51 (ENSSTOG00000020167) #29	ENSSTOG00000030433 #31	ENSSTOG00000023112 #31	PRDM2 (ENSSTOG00000019848)	PDPN (ENSSTOG00000032629)	LRRC38 (ENSSTOG00000023111)	CFAP107 (ENSSTOG00000009816)	AADACL3 (ENSSTOG00000007059)	AADACL4 (ENSSTOG00000019534)
Arctic ground squirrel	MODERN SPECIES	236	FBXO42 (ENSUPAG00010017950)	CPLANE2 (ENSUPAG00010017964) #7	ARHGEF19 (ENSUPAG00010017982) #8	EPHA2 (ENSUPAG00010017996) #9	FAM131C (ENSUPAG00010018009) #10	ENSUPAG00010018021 #12	HSPB7 (ENSUPAG00010018035) #13	SRARP (ENSUPAG00010018039)	ZBTB17 (ENSUPAG00010018044) #14	SPEN (ENSUPAG00010018064) #15	FBLIM1 (ENSUPAG00010018076) #16	TMEM82 (ENSUPAG00010018085) #17	SLC25A34 (ENSUPAG00010018099) #18	PLEKHM2 (ENSUPAG00010018117) #19	ENSUPAG00010018182 #20	AGMAT (ENSUPAG00010018210) #22	DNAJC16 (ENSUPAG00010018220) #23	CASP9 (ENSUPAG00010018242) #24	ENSUPAG00010018260 #25
Alpin marmot	MODERN SPECIES	15	ENSMMMG00000021379	CPLANE2 (ENSMMMG00000021380) #7	ARHGEF19 (ENSMMMG00000021384) #8	EPHA2 (ENSMMMG00000021393) #9	FAM131C (ENSMMMG00000021619) #10	ENSMMMG00000021622 #12	HSPB7 (ENSMMMG00000021631) #13	SRARP (ENSMMMG00000021634)	ZBTB17 (ENSMMMG00000021636) #14	ENSMMMG00000021647	FBLIM1 (ENSMMMG00000021649) #16	TMEM82 (ENSMMMG00000021661) #17	SLC25A34 (ENSMMMG00000021668) #18	PLEKHM2 (ENSMMMG00000021689) #19	DDI2 (ENSMMMG00000021707) #21	AGMAT (ENSMMMG00000021713) #22	DNAJC16 (ENSMMMG00000021719) #23	CASP9 (ENSMMMG00000021730) #24	ENSMMMG00000021744 #25	EFHD2 (ENSMMMG00000021754) #27	FHAD1 (ENSMMMG00000021774) #28	TMEM51 (ENSMMMG00000021802) #29	KAZN (ENSMMMG00000021835) #31	PRDM2 (ENSMMMG00000021858)	ENSMMMG00000021882	LRRC38 (ENSMMMG00000021887)
Eurasian red squirrel	MODERN SPECIES		CPLANE2 (ENSSVLG00005000646) #7	ARHGEF19 (ENSSVLG00005000627) #8	EPHA2 (ENSSVLG00005000603) #9	FAM131C (ENSSVLG00005000572) #10	ENSSVLG00005000408 #12	HSPB7 (ENSSVLG00005000082) #13	SRARP (ENSSVLG00005010560)	ZBTB17 (ENSSVLG00005010439) #14	SPEN (ENSSVLG00005010400) #15	FBLIM1 (ENSSVLG00005010292) #16	TMEM82 (ENSSVLG00005010237) #17	SLC25A34 (ENSSVLG00005010194) #18	PLEKHM2 (ENSSVLG00005010150) #19	RSC1A1 (ENSSVLG00005010092) #20	DDI2 (ENSSVLG00005010074) #21	AGMAT (ENSSVLG00005010003) #22	ENSSVLG00005009978	DNAJC16 (ENSSVLG00005009925) #23	ENSSVLG00005009886	ENSSVLG00005009810 #25	ENSSVLG00005009617 #25	CTRC (ENSSVLG00005009531) #26	EFHD2 (ENSSVLG00005009504) #27	FHAD1 (ENSSVLG00005009255) #28	TMEM51 (ENSSVLG00005009207) #29	KAZN (ENSSVLG00005008929) #31	PRDM2 (ENSSVLG00005008674)	PDPN (ENSSVLG00005008527)	LRRC38 (ENSSVLG00005008488)	ENSSVLG00005008079	CFAP107 (ENSSVLG00005007956)
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748 #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410	ENSGT00940000170582	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.b.c	ENSGT00390000014553	ENSGT00940000162160
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748 #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410	ENSGT00940000170582	ENSGT00940000162571	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.g.b	ENSGT00940000157630.g.a
Guinea pig	MODERN SPECIES	25	CPLANE2 (ENSCPOG00000040319) #7	ENSCPOG00000019656	EPHA2 (ENSCPOG00000003065) #9	FAM131C (ENSCPOG00000027194) #10	ENSCPOG00000010602 #12	HSPB7 (ENSCPOG00000034311) #13	SRARP (ENSCPOG00000036293)	ZBTB17 (ENSCPOG00000014042) #14	SPEN (ENSCPOG00000014036) #15	FBLIM1 (ENSCPOG00000024867) #16	TMEM82 (ENSCPOG00000012084) #17	SLC25A34 (ENSCPOG00000012078) #18	PLEKHM2 (ENSCPOG00000012069) #19	RSC1A1 (ENSCPOG00000012066) #20	DDI2 (ENSCPOG00000020885) #21	AGMAT (ENSCPOG00000026931) #22	DNAJC16 (ENSCPOG00000012059) #23	CASP9 (ENSCPOG00000012051) #24	ENSCPOG00000038747 #25	ENSCPOG00000039418 #25	CTRC (ENSCPOG00000034507) #26	EFHD2 (ENSCPOG00000022076) #27	FHAD1 (ENSCPOG00000014449) #28	TMEM51 (ENSCPOG00000035704) #29	ENSCPOG00000035462 #31	ENSCPOG00000007591 #31	PRDM2 (ENSCPOG00000038436)	ENSCPOG00000038973	LRRC38 (ENSCPOG00000031681)	CFAP107 (ENSCPOG00000003643)	AADACL3 (ENSCPOG00000000228)
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00440000039706	ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748 #12	ENSGT00390000010674 #13	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00940000160016 #18	ENSGT00390000015175 #19	ENSGT00390000005744 #20	ENSGT00950000182999.a.a #21	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29	ENSGT00940000154570.b #31	ENSGT00940000159410	ENSGT00940000170582	ENSGT00940000162571
Long-tailed chinchilla	MODERN SPECIES	234	SZRD1 (ENSCLAG00000003038)	FBXO42 (ENSCLAG00000002198)	CPLANE2 (ENSCLAG00000002302) #7	ARHGEF19 (ENSCLAG00000002678) #8	EPHA2 (ENSCLAG00000003129) #9	FAM131C (ENSCLAG00000004083) #10	ENSCLAG00000004938 #12	HSPB7 (ENSCLAG00000005960) #13	ZBTB17 (ENSCLAG00000006044) #14	SPEN (ENSCLAG00000002018) #15	FBLIM1 (ENSCLAG00000003668) #16	TMEM82 (ENSCLAG00000004347) #17	SLC25A34 (ENSCLAG00000002647) #18	PLEKHM2 (ENSCLAG00000003128) #19	ENSCLAG00000003693 #20	AGMAT (ENSCLAG00000004055) #22	DNAJC16 (ENSCLAG00000002114) #23	CASP9 (ENSCLAG00000003082) #24	ENSCLAG00000010512 #25	CTRC (ENSCLAG00000010834) #26	EFHD2 (ENSCLAG00000014606) #27	FHAD1 (ENSCLAG00000012202) #28	TMEM51 (ENSCLAG00000003533) #29	ENSCLAG00000003684 #31	ENSCLAG00000003967 #31	PRDM2 (ENSCLAG00000004362)	ENSCLAG00000002299	LRRC38 (ENSCLAG00000002559)
Degu	MODERN SPECIES	133	EPHA2 (ENSODEG00000016363) #9	FAM131C (ENSODEG00000016610) #10	ENSODEG00000016231 #12	HSPB7 (ENSODEG00000016081) #13	ENSODEG00000020349	ENSODEG00000016716	ENSODEG00000020337	ZBTB17 (ENSODEG00000016152) #14	SPEN (ENSODEG00000016644) #15	FBLIM1 (ENSODEG00000016558) #16	TMEM82 (ENSODEG00000016458) #17	SLC25A34 (ENSODEG00000016800) #18	PLEKHM2 (ENSODEG00000016981) #19	RSC1A1 (ENSODEG00000016320) #20	DDI2 (ENSODEG00000016549) #21	AGMAT (ENSODEG00000016792) #22	DNAJC16 (ENSODEG00000016313) #23	ENSODEG00000016480	ENSODEG00000016581 #25	ENSODEG00000020480	CTRC (ENSODEG00000016340) #26	EFHD2 (ENSODEG00000016306) #27	FHAD1 (ENSODEG00000016605) #28	TMEM51 (ENSODEG00000016454) #29	ENSODEG00000016473 #31	ENSODEG00000016425 #31	PRDM2 (ENSODEG00000017400)
Naked mole-rat female	MODERN SPECIES	26	RSG1 (ENSHGLG00000034672) #7	ARHGEF19 (ENSHGLG00000012640) #8	EPHA2 (ENSHGLG00000012989) #9	FAM131C (ENSHGLG00000010221) #10	ENSHGLG00000012896 #12	HSPB7 (ENSHGLG00000035307) #13	ENSHGLG00000010058	ZBTB17 (ENSHGLG00000011895) #14	SPEN (ENSHGLG00000032487) #15	ENSHGLG00000014407	FBLIM1 (ENSHGLG00000019134) #16	TMEM82 (ENSHGLG00000011424) #17	SLC25A34 (ENSHGLG00000032560) #18	PLEKHM2 (ENSHGLG00000007190) #19	ENSHGLG00000038027 #20	AGMAT (ENSHGLG00000007473) #22	DNAJC16 (ENSHGLG00000014574) #23	CASP9 (ENSHGLG00000019310) #24	ENSHGLG00000016895 #25	CTRC (ENSHGLG00000018486) #26	EFHD2 (ENSHGLG00000046486) #27	FHAD1 (ENSHGLG00000018196) #28	TMEM51 (ENSHGLG00000013366) #29	ENSHGLG00000009940 #31	ENSHGLG00000035804	CPT2 (ENSHGLG00000003070)	ENSHGLG00000002034	ENSHGLG00000001648	LRP8 (ENSHGLG00000001818)	ENSHGLG00000041952	NDC1 (ENSHGLG00000001547)
Lagomorpha	ANCESTRAL SPECIES	144		ENSGT00390000005532.e.b	ENSGT00440000039706	ENSGT00390000006521 #7	ENSGT01030000234571.b.b.b.a.b #8	ENSGT00940000160786 #9	ENSGT00950000183106.b #10	ENSGT00940000158748 #12	ENSGT00390000010674 #13	ENSGT00390000000265	ENSGT00940000159957 #14	ENSGT00940000157087.a.b #15	ENSGT00940000159003 #16	ENSGT00500000045021 #17	ENSGT00390000015175 #19	ENSGT00950000183195.a #22	ENSGT00940000155851 #23	ENSGT00940000159698 #24	ENSGT01030000234528.B.a.a #25	ENSGT00940000153216.a.b #26	ENSGT00390000012058.c.b #27	ENSGT00940000154171.A #28	ENSGT00390000009278 #29
Rabbit	MODERN SPECIES	524	SPATA21 (ENSOCUG00000003478)	ENSOCUG00000028077	FBXO42 (ENSOCUG00000011408)	CPLANE2 (ENSOCUG00000013650) #7	ARHGEF19 (ENSOCUG00000023000) #8	EPHA2 (ENSOCUG00000000786) #9	FAM131C (ENSOCUG00000004252) #10	ENSOCUG00000004245 #12	HSPB7 (ENSOCUG00000010852) #13	SRARP (ENSOCUG00000010850)	ZBTB17 (ENSOCUG00000026236) #14	SPEN (ENSOCUG00000010840) #15	FBLIM1 (ENSOCUG00000011817) #16	TMEM82 (ENSOCUG00000004586) #17	PLEKHM2 (ENSOCUG00000004574) #19	AGMAT (ENSOCUG00000026657) #22	DNAJC16 (ENSOCUG00000016060) #23	CASP9 (ENSOCUG00000016047) #24	ENSOCUG00000025248 #25	CTRC (ENSOCUG00000016035) #26	EFHD2 (ENSOCUG00000026564) #27	FHAD1 (ENSOCUG00000007849) #28	TMEM51 (ENSOCUG00000002279) #29
Pika	MODERN SPECIES	1782																AGMAT (ENSOPRG00000009482) #22	DNAJC16 (ENSOPRG00000009461) #23	ENSOPRG00000009441 #24	ENSOPRG00000018849 #25	CTRC (ENSOPRG00000009429) #26	EFHD2 (ENSOPRG00000009415) #27