Euarchontoglires ANCESTRAL SPECIES 12 ENSGT00940000170143 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j ENSGT01090000260018.B.b Euarchontoglires_A ANCESTRAL SPECIES 12 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j ENSGT01090000260018.B.b ENSGT00940000163330 Glires ANCESTRAL SPECIES 11 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a ENSGT01090000260018.B.b ENSGT00940000163330 Lagomorpha ANCESTRAL SPECIES 54 ENSGT00390000015826 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.b ENSGT00950000183069.a.a ENSGT01090000260018.B.b ENSGT00940000163330 ENSGT01090000260005.a.a.a.a.d Pika MODERN SPECIES 1043 ARPC1B (ENSOPRG00000013600) #22 PDAP1 (ENSOPRG00000013615) #23 BUD31 (ENSOPRG00000013631) #24 PTCD1 (ENSOPRG00000013647) #25 CPSF4 (ENSOPRG00000013663) #26 ATP5MF (ENSOPRG00000013680) #27 Rabbit MODERN SPECIES 493 NPTX2 (ENSOCUG00000017210) TMEM130 (ENSOCUG00000014924) TRRAP (ENSOCUG00000001829) SMURF1 (ENSOCUG00000016326) KPNA7 (ENSOCUG00000001792) ARPC1A (ENSOCUG00000003944) ##22 ARPC1B (ENSOCUG00000025962) #22 PDAP1 (ENSOCUG00000010572) #23 BUD31 (ENSOCUG00000010576) #24 PTCD1 (ENSOCUG00000010584) #25 CPSF4 (ENSOCUG00000002437) #26 ENSOCUG00000015693 #27 ENSOCUG00000038839 ZNF394 (ENSOCUG00000002444) ZKSCAN5 (ENSOCUG00000002447) ZNF655 (ENSOCUG00000007932) ZSCAN25 (ENSOCUG00000007939) ENSOCUG00000025181 ENSOCUG00000024710 CYP3A6 (ENSOCUG00000023380) ENSOCUG00000027046 ENSOCUG00000035935 Rodentia ANCESTRAL SPECIES 11 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.b ENSGT01090000260018.B.b ENSGT01090000260005.a.a.a.a Rodentia_A ANCESTRAL SPECIES 10 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.b ENSGT01090000260018.B.b ENSGT01090000260005.a.a.a.a Sciuridae ANCESTRAL SPECIES 9 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300.ib #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.e.a #27 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.b ENSGT01090000260018.B.b ENSGT01090000260005.a.a.a.a Marmotini ANCESTRAL SPECIES 85 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300.ib #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.e.a #27 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.b.b.b.b.a.b.a Marmotini_b ANCESTRAL SPECIES 131 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300.ib #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.e.a #27 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.b.b.b.b.a.b.a Squirrel MODERN SPECIES 350 ENSSTOG00000006111 ENSSTOG00000026631 ENSSTOG00000006071 ENSSTOG00000010731 LMTK2 (ENSSTOG00000009706) BHLHA15 (ENSSTOG00000009728) TECPR1 (ENSSTOG00000009733) BRI3 (ENSSTOG00000021622) BAIAP2L1 (ENSSTOG00000020782) NPTX2 (ENSSTOG00000003631) TMEM130 (ENSSTOG00000010723) TRRAP (ENSSTOG00000028392) SMURF1 (ENSSTOG00000015427) KPNA7 (ENSSTOG00000032733) ARPC1A (ENSSTOG00000001660) ##22 ARPC1B (ENSSTOG00000001668) #22 PDAP1 (ENSSTOG00000001679) #23 BUD31 (ENSSTOG00000023828) #24 PTCD1 (ENSSTOG00000001682) #25 CPSF4 (ENSSTOG00000001688) #26 ATP5MF (ENSSTOG00000023928) #27 ENSSTOG00000034172 ZNF394 (ENSSTOG00000032054) ZKSCAN5 (ENSSTOG00000019879) ZNF655 (ENSSTOG00000008206) ZSCAN25 (ENSSTOG00000008185) Arctic ground squirrel MODERN SPECIES 300 ENSUPAG00010006347 ENSUPAG00010006809 LMTK2 (ENSUPAG00010006825) BHLHA15 (ENSUPAG00010006858) TECPR1 (ENSUPAG00010006865) BRI3 (ENSUPAG00010006894) BAIAP2L1 (ENSUPAG00010006906) NPTX2 (ENSUPAG00010006944) TMEM130 (ENSUPAG00010006958) TRRAP (ENSUPAG00010006983) ENSUPAG00010007610 SMURF1 (ENSUPAG00010007614) KPNA7 (ENSUPAG00010007717) ENSUPAG00010007740 ARPC1A (ENSUPAG00010007778) ##22 ARPC1B (ENSUPAG00010007793) #22 PDAP1 (ENSUPAG00010007814) #23 BUD31 (ENSUPAG00010007837) #24 PTCD1 (ENSUPAG00010007850) #25 CPSF4 (ENSUPAG00010007865) #26 ENSUPAG00010007991 ENSUPAG00010007996 #27 ENSUPAG00010008010 ENSUPAG00010008013 ZKSCAN5 (ENSUPAG00010008019) ZNF655 (ENSUPAG00010008051) TMEM225B (ENSUPAG00010008085) ZSCAN25 (ENSUPAG00010008096) ENSUPAG00010008106 ENSUPAG00010008122 ENSUPAG00010008173 Alpin marmot MODERN SPECIES 77 ENSMMMG00000006346 ENSMMMG00000006340 LMTK2 (ENSMMMG00000006321) BHLHA15 (ENSMMMG00000006320) TECPR1 (ENSMMMG00000006293) ENSMMMG00000006285 BRI3 (ENSMMMG00000006279) BAIAP2L1 (ENSMMMG00000006242) NPTX2 (ENSMMMG00000006236) TMEM130 (ENSMMMG00000006225) TRRAP (ENSMMMG00000005650) SMURF1 (ENSMMMG00000005602) KPNA7 (ENSMMMG00000005564) ENSMMMG00000005492 ARPC1A (ENSMMMG00000005477) ##22 ARPC1B (ENSMMMG00000005459) #22 PDAP1 (ENSMMMG00000005448) #23 BUD31 (ENSMMMG00000005402) #24 PTCD1 (ENSMMMG00000005393) #25 ENSMMMG00000005390 CPSF4 (ENSMMMG00000005304) #26 ENSMMMG00000005266 #27 ZNF394 (ENSMMMG00000005254) ZKSCAN5 (ENSMMMG00000005213) ZNF655 (ENSMMMG00000005178) TMEM225B (ENSMMMG00000005168) ZSCAN25 (ENSMMMG00000005159) ENSMMMG00000005149 ENSMMMG00000005108 ENSMMMG00000005062 Eurasian red squirrel MODERN SPECIES 9 ENSSVLG00005020724 ENSSVLG00005020777 LMTK2 (ENSSVLG00005020820) BHLHA15 (ENSSVLG00005020870) TECPR1 (ENSSVLG00005020896) ENSSVLG00005020936 BRI3 (ENSSVLG00005020971) BAIAP2L1 (ENSSVLG00005021009) NPTX2 (ENSSVLG00005021028) TMEM130 (ENSSVLG00005021101) TRRAP (ENSSVLG00005021317) SMURF1 (ENSSVLG00005021442) KPNA7 (ENSSVLG00005021513) ENSSVLG00005021650 ENSSVLG00005021905 ##22 ARPC1B (ENSSVLG00005021982) #22 ENSSVLG00005022058 #23 BUD31 (ENSSVLG00005022102) #24 PTCD1 (ENSSVLG00005022169) #25 CPSF4 (ENSSVLG00005022210) #26 ENSSVLG00005022299 #27 ENSSVLG00005022403 ZNF789 (ENSSVLG00005022423) ZNF394 (ENSSVLG00005022501) ZKSCAN5 (ENSSVLG00005022583) ZNF655 (ENSSVLG00005022626) TMEM225B (ENSSVLG00005022717) ZSCAN25 (ENSSVLG00005022756) ENSSVLG00005022805 ENSSVLG00005023015 OR2AE1 (ENSSVLG00005023354) Hystricomorpha ANCESTRAL SPECIES 17 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.a.a ENSGT00950000182958.a.b.b.j.a.a.b ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 Hystricomorpha_a ANCESTRAL SPECIES 16 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.a.a ENSGT00950000182958.a.b.b.j.a.a.b ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 Guinea pig MODERN SPECIES 30 ENSCPOG00000019836 ENSCPOG00000014787 ENSCPOG00000011911 ENSCPOG00000031560 LMTK2 (ENSCPOG00000009408) BHLHA15 (ENSCPOG00000033368) TECPR1 (ENSCPOG00000010430) BRI3 (ENSCPOG00000025281) BAIAP2L1 (ENSCPOG00000009274) NPTX2 (ENSCPOG00000012135) TMEM130 (ENSCPOG00000010669) TRRAP (ENSCPOG00000007298) SMURF1 (ENSCPOG00000000124) KPNA7 (ENSCPOG00000014326) ENSCPOG00000001777 ##22 ARPC1B (ENSCPOG00000020413) #22 PDAP1 (ENSCPOG00000023217) #23 BUD31 (ENSCPOG00000001779) #24 PTCD1 (ENSCPOG00000001780) #25 CPSF4 (ENSCPOG00000001783) #26 ENSCPOG00000034651 ZNF394 (ENSCPOG00000013321) ZKSCAN5 (ENSCPOG00000032578) ZNF655 (ENSCPOG00000032275) ZSCAN25 (ENSCPOG00000031211) Cyp3a14 (ENSCPOG00000001589) ENSCPOG00000024937 ENSCPOG00000012976 ENSCPOG00000020375 ENSCPOG00000022315 GJC3 (ENSCPOG00000012551) Hystricomorpha_b ANCESTRAL SPECIES 55 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 Degu MODERN SPECIES 72 EIF2AK1 (ENSODEG00000011509) ENSODEG00000011718 ENSODEG00000012084 ENSODEG00000011251 ENSODEG00000011077 LMTK2 (ENSODEG00000012233) TECPR1 (ENSODEG00000011578) BRI3 (ENSODEG00000010514) BAIAP2L1 (ENSODEG00000010504) ENSODEG00000012635 NPTX2 (ENSODEG00000011311) TMEM130 (ENSODEG00000010706) TRRAP (ENSODEG00000013196) SMURF1 (ENSODEG00000012098) ENSODEG00000010891 ##22 ARPC1B (ENSODEG00000011865) #22 ENSODEG00000012197 #23 BUD31 (ENSODEG00000011226) #24 ENSODEG00000011181 #26 ENSODEG00000012299 ZKSCAN5 (ENSODEG00000012014) ZNF655 (ENSODEG00000011702) ZSCAN25 (ENSODEG00000012099) Long-tailed chinchilla MODERN SPECIES 167 ENSCLAG00000009853 ENSCLAG00000004477 ENSCLAG00000006812 ENSCLAG00000007617 LMTK2 (ENSCLAG00000005806) BHLHA15 (ENSCLAG00000006581) TECPR1 (ENSCLAG00000006941) BRI3 (ENSCLAG00000012095) BAIAP2L1 (ENSCLAG00000013528) NPTX2 (ENSCLAG00000013930) TMEM130 (ENSCLAG00000006489) TRRAP (ENSCLAG00000007110) SMURF1 (ENSCLAG00000005211) KPNA7 (ENSCLAG00000006067) ARPC1A (ENSCLAG00000006964) ##22 ARPC1B (ENSCLAG00000006996) #22 PDAP1 (ENSCLAG00000007628) #23 BUD31 (ENSCLAG00000008079) #24 PTCD1 (ENSCLAG00000006354) #25 CPSF4 (ENSCLAG00000007050) #26 ATP5MF (ENSCLAG00000004636) #27 ZNF394 (ENSCLAG00000005098) ZKSCAN5 (ENSCLAG00000006450) ZNF655 (ENSCLAG00000012856) TMEM225B (ENSCLAG00000007073) ZSCAN25 (ENSCLAG00000006740) Naked mole-rat female MODERN SPECIES BHLHA15 (ENSHGLG00000033900) TECPR1 (ENSHGLG00000018344) ENSHGLG00000015104 ENSHGLG00000013687 ENSHGLG00000032492 BAIAP2L1 (ENSHGLG00000017707) ENSHGLG00000044552 ENSHGLG00000007737 ENSHGLG00000042548 TMEM130 (ENSHGLG00000008380) TRRAP (ENSHGLG00000013805) SMURF1 (ENSHGLG00000006003) ENSHGLG00000009628 ENSHGLG00000043221 ENSHGLG00000017246 ##22 ARPC1B (ENSHGLG00000017816) #22 PDAP1 (ENSHGLG00000013857) #23 ENSHGLG00000018123 #24 PTCD1 (ENSHGLG00000017621) #25 ENSHGLG00000017150 #26 ENSHGLG00000006068 #27 ENSHGLG00000006453 ZNF394 (ENSHGLG00000033544) ZKSCAN5 (ENSHGLG00000009175) ZNF655 (ENSHGLG00000005530) ENSHGLG00000040144 ENSHGLG00000033148 ENSHGLG00000038153 ENSHGLG00000041246 ENSHGLG00000000859 HS3ST5 (ENSHGLG00000045242) Rodentia_B ANCESTRAL SPECIES 29 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.a.b ENSGT00950000182958.a.b.b.j.a.a.b ENSGT00950000182958.a.b.b.j.a.b ENSGT01090000260018.B.b ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a Myomorpha ANCESTRAL SPECIES 31 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.a.a ENSGT00950000182958.a.b.b.j.a.b ENSGT01090000260018.B.b ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 Muroidea ANCESTRAL SPECIES 51 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.c #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.a.b ENSGT00950000182958.a.b.b.j.a.a.a.a Muroidea_A ANCESTRAL SPECIES 27 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.c #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.a.b ENSGT00950000182958.a.b.b.j.a.a.a.a ENSGT00940000158530.j ENSGT00940000157104 ENSGT00950000182962.a.a ENSGT01060000248564.b.a.b.a Cricetidae ANCESTRAL SPECIES 27 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713.g ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.c #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.a.b ENSGT00950000182958.a.b.b.j.a.a.a.a ENSGT00940000158530.j.a ENSGT00940000157104 ENSGT00950000182962.a.a ENSGT01060000248564.b.a.b.a Cricetinae ANCESTRAL SPECIES 19 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713.g ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.c #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00950000182958.a.b.b.j.a.a.a.b.b ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.a.b.a ENSGT00950000182958.a.b.b.j.a.a.a.a ENSGT00940000158530.j.a ENSGT00940000157104 ENSGT00950000182962.a.a Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 130 Ccz1 (ENSCGRG00001021911) Ocm (ENSCGRG00001020230) Lmtk2 (ENSCGRG00001005742) Bhlha15 (ENSCGRG00001003090) Tecpr1 (ENSCGRG00001010075) Bri3 (ENSCGRG00001003030) Baiap2l1 (ENSCGRG00001018597) ENSCGRG00001012810 Nptx2 (ENSCGRG00001001038) Tmem130 (ENSCGRG00001017171) ENSCGRG00001014941 Trrap (ENSCGRG00001015326) Smurf1 (ENSCGRG00001020132) Kpna7 (ENSCGRG00001007501) ENSCGRG00001021831 ##22 ENSCGRG00001021035 #22 Pdap1 (ENSCGRG00001016829) #23 Bud31 (ENSCGRG00001012044) #24 Ptcd1 (ENSCGRG00001023686) #25 Cpsf4 (ENSCGRG00001024184) #26 Atp5j2 (ENSCGRG00001016065) #27 Zkscan14 (ENSCGRG00001014948) Zkscan5 (ENSCGRG00001021752) Zfp655 (ENSCGRG00001016484) ENSCGRG00001019977 Zscan25 (ENSCGRG00001017680) ENSCGRG00001010181 ENSCGRG00001023511 ENSCGRG00001020483 Rnf6 (ENSCGRG00001010459) Cdk8 (ENSCGRG00001010747) Chinese hamster chok1gshd MODERN SPECIES 101 Asb7 (ENSCGRG00001013196) Lins1 (ENSCGRG00001016676) Cers3 (ENSCGRG00001019177) Adamts17 (ENSCGRG00001015416) Lysmd4 (ENSCGRG00001023024) Mef2a (ENSCGRG00001010696) Lrrc28 (ENSCGRG00001005872) Ttc23 (ENSCGRG00001014885) Synm (ENSCGRG00001009711) Igf1r (ENSCGRG00001024468) Pgpep1l (ENSCGRG00001013682) Fam169b (ENSCGRG00001013956) Arrdc4 (ENSCGRG00001021034) ENSCGRG00001022756 Nr2f2 (ENSCGRG00001011537) ENSCGRG00001008245 #22 Mctp2 (ENSCGRG00001021616) ENSCGRG00001006608 Rgma (ENSCGRG00001019932) Chd2 (ENSCGRG00001006649) Fam174b (ENSCGRG00001018170) St8sia2 (ENSCGRG00001018925) Slco3a1 (ENSCGRG00001017955) Sv2b (ENSCGRG00001019863) ENSCGRG00001024289 ENSCGRG00001000354 ENSCGRG00001008980 Akap13 (ENSCGRG00001014312) Klhl25 (ENSCGRG00001012399) Agbl1 (ENSCGRG00001015401) Ntrk3 (ENSCGRG00001021632) Chinese hamster chok1gshd MODERN SPECIES 16 4933403O08Rik (ENSCGRG00001018687) ENSCGRG00001000206 ENSCGRG00001000138 2010106E10Rik (ENSCGRG00001018464) Zfp711 (ENSCGRG00001010150) Pof1b (ENSCGRG00001015632) Chm (ENSCGRG00001006793) Tpm3-rs7 (ENSCGRG00001006979) Dach2 (ENSCGRG00001023530) ENSCGRG00001006882 Klhl4 (ENSCGRG00001016767) ENSCGRG00001004881 ENSCGRG00001010570 ENSCGRG00001003703 ENSCGRG00001006460 ENSCGRG00001009434 #22 Diaph2 (ENSCGRG00001018454) ENSCGRG00001023968 ENSCGRG00001022345 Pcdh19 (ENSCGRG00001014584) Tnmd (ENSCGRG00001002116) Tspan6 (ENSCGRG00001023806) Srpx2 (ENSCGRG00001015475) Sytl4 (ENSCGRG00001016125) Cstf2 (ENSCGRG00001023023) Nox1 (ENSCGRG00001023137) Xkrx (ENSCGRG00001019171) Arl13a (ENSCGRG00001021947) Trmt2b (ENSCGRG00001021883) Tmem35a (ENSCGRG00001000179) Cenpi (ENSCGRG00001018101) Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 712 ENSMAUG00000014015 ENSMAUG00000011345 Ccz1 (ENSMAUG00000004705) Ocm (ENSMAUG00000016041) Lmtk2 (ENSMAUG00000014353) Tecpr1 (ENSMAUG00000008072) Bri3 (ENSMAUG00000000701) Baiap2l1 (ENSMAUG00000008280) Nptx2 (ENSMAUG00000017629) ENSMAUG00000000660 Tmem130 (ENSMAUG00000020273) Trrap (ENSMAUG00000015855) Smurf1 (ENSMAUG00000000511) Kpna7 (ENSMAUG00000019165) ENSMAUG00000014235 ##22 ENSMAUG00000003299 #22 Pdap1 (ENSMAUG00000011742) #23 Bud31 (ENSMAUG00000016405) #24 ENSMAUG00000011008 Cpsf4 (ENSMAUG00000021253) #26 Atp5j2 (ENSMAUG00000018419) #27 Zkscan5 (ENSMAUG00000014532) Zscan25 (ENSMAUG00000012364) ENSMAUG00000013270 ENSMAUG00000011782 Rnf6 (ENSMAUG00000014438) ENSMAUG00000013390 Wasf3 (ENSMAUG00000004464) Golden Hamster MODERN SPECIES 689 Efnb2 (ENSMAUG00000001276) Slc10a2 (ENSMAUG00000011194) Shcbp1 (ENSMAUG00000019669) Rrn3 (ENSMAUG00000011506) Ntan1 (ENSMAUG00000010841) Pdxdc1 (ENSMAUG00000010809) Mpv17l (ENSMAUG00000003589) ENSMAUG00000014370 Marf1 (ENSMAUG00000018205) ENSMAUG00000019358 ENSMAUG00000008568 Myh11 (ENSMAUG00000020559) Cep20 (ENSMAUG00000011902) ENSMAUG00000006717 Abcc1 (ENSMAUG00000021635) ENSMAUG00000014105 #22 Flnb (ENSMAUG00000013744) Gm45521 (ENSMAUG00000001771) Dnase1l3 (ENSMAUG00000011466) Abhd6 (ENSMAUG00000010276) ENSMAUG00000017489 Rpp14 (ENSMAUG00000022082) Pxk (ENSMAUG00000011206) Pdhb (ENSMAUG00000004888) ENSMAUG00000009900 Lrrc8b (ENSMAUG00000000978) Lrrc8c (ENSMAUG00000007752) Lrrc8d (ENSMAUG00000012239) Zfp326 (ENSMAUG00000020840) Barhl2 (ENSMAUG00000013573) ENSMAUG00000016699 Cricetidae_B ANCESTRAL SPECIES 46 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713.g ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.c #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 Northern American deer mouse MODERN SPECIES 15 Rsph10b (ENSPEMG00000017010) Ccz1 (ENSPEMG00000007600) Ocm (ENSPEMG00000023404) Lmtk2 (ENSPEMG00000002227) Bhlha15 (ENSPEMG00000009777) Tecpr1 (ENSPEMG00000002374) Bri3 (ENSPEMG00000009259) Baiap2l1 (ENSPEMG00000016921) Nptx2 (ENSPEMG00000004530) ENSPEMG00000030777 Tmem130 (ENSPEMG00000017312) Trrap (ENSPEMG00000007905) Smurf1 (ENSPEMG00000004784) Kpna7 (ENSPEMG00000017218) Arpc1a (ENSPEMG00000013996) ##22 Arpc1b (ENSPEMG00000017147) #22 ENSPEMG00000015747 #23 Bud31 (ENSPEMG00000010947) #24 Ptcd1 (ENSPEMG00000013736) #25 Cpsf4 (ENSPEMG00000004508) #26 Atp5j2 (ENSPEMG00000013672) #27 Zkscan14 (ENSPEMG00000011797) Zkscan5 (ENSPEMG00000010963) ENSPEMG00000011222 ENSPEMG00000030363 ENSPEMG00000029204 ENSPEMG00000031372 ENSPEMG00000026224 Rxfp2 (ENSPEMG00000018554) B3glct (ENSPEMG00000015898) ENSPEMG00000025164 Prairie vole MODERN SPECIES 110 Aimp2 (ENSMOCG00000014024) ENSMOCG00000010177 Rsph10b (ENSMOCG00000018506) Ccz1 (ENSMOCG00000018777) Ocm (ENSMOCG00000005057) Lmtk2 (ENSMOCG00000019505) Tecpr1 (ENSMOCG00000021771) Bri3 (ENSMOCG00000007653) Baiap2l1 (ENSMOCG00000002763) Nptx2 (ENSMOCG00000011501) Tmem130 (ENSMOCG00000015764) Trrap (ENSMOCG00000000272) Smurf1 (ENSMOCG00000010176) Kpna7 (ENSMOCG00000012853) Arpc1a (ENSMOCG00000020844) ##22 Arpc1b (ENSMOCG00000010471) #22 Pdap1 (ENSMOCG00000015800) #23 Zfp655 (ENSMOCG00000019962) Zkscan5 (ENSMOCG00000011909) Atp5j2 (ENSMOCG00000003786) #27 Cpsf4 (ENSMOCG00000014901) #26 ENSMOCG00000016192 Bud31 (ENSMOCG00000017115) #24 Murinae ANCESTRAL SPECIES 28 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.c #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.a.b ENSGT00950000182958.a.b.b.j.a.a.a.a ENSGT00940000158530.j ENSGT00940000157104 ENSGT00950000182962.a.a ENSGT01060000248564.b.a.b.a Mus ANCESTRAL SPECIES 17 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.c #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.b ENSGT00950000182958.a.b.b.j.a.a.a.a.d ENSGT00950000182958.a.b.b.j.a.a.a.b ENSGT00950000182958.a.b.b.j.a.a.a.a.c ENSGT00940000158530.j ENSGT00940000157104 Mus_A DUPLICATION Mus_A ANCESTRAL SPECIES 6 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000156012.q ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b.w #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.c #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.b ENSGT00950000182958.a.b.b.j.a.a.a.a.d ENSGT00950000182958.a.b.b.j.a.a.a.b ENSGT00950000182958.a.b.b.j.a.a.a.a.c ENSGT00940000158530.j ENSGT00940000157104 Mus_B ANCESTRAL SPECIES 4 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000156012.q ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b.w #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.c #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00940000162113 ENSGT00950000182958.a.b.b.j.a.a.a.a.d ENSGT00950000182958.a.b.b.j.a.a.a.b.j ENSGT00950000182958.a.b.b.j.a.a.a.b.i.b ENSGT00950000182958.a.b.b.j.a.a.a.a.c.a.a ENSGT00940000158530.j ENSGT00940000157104 Mus_C ANCESTRAL SPECIES 4 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000156012.q ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b.w #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.c #27 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00940000162113 ENSGT00940000155423.e.b ENSGT00940000158530.j ENSGT00940000157104 ENSGT00950000182962.a.a ENSGT01060000248564.b.a.b.a ENSGT00940000153284.a.h Steppe mouse MODERN SPECIES 3370 Ocm (ENSMSIG00000029288) Lmtk2 (ENSMSIG00000029281) Bhlha15 (ENSMSIG00000029278) Tecpr1 (ENSMSIG00000029264) ENSMSIG00000029259 Baiap2l1 (ENSMSIG00000029242) ENSMSIG00000029239 Nptx2 (ENSMSIG00000029233) Tmem130 (ENSMSIG00000029228) Trrap (ENSMSIG00000029078) Smurf1 (ENSMSIG00000029028) ENSMSIG00000029026 ENSMSIG00000029019 Arpc1a (ENSMSIG00000029008) ##22 ENSMSIG00000029006 Arpc1b (ENSMSIG00000028992) #22 Pdap1 (ENSMSIG00000028982) #23 Bud31 (ENSMSIG00000028973) #24 Ptcd1 (ENSMSIG00000028962) #25 Cpsf4 (ENSMSIG00000028934) #26 Atp5j2 (ENSMSIG00000028928) #27 ENSMSIG00000028921 Zkscan5 (ENSMSIG00000028906) Zscan25 (ENSMSIG00000028875) spretus MODERN SPECIES 14 MGP_SPRETEiJ_G0028994 Rsph10b (MGP_SPRETEiJ_G0028995) Ccz1 (MGP_SPRETEiJ_G0028996) Ocm (MGP_SPRETEiJ_G0028997) Lmtk2 (MGP_SPRETEiJ_G0028998) Bhlha15 (MGP_SPRETEiJ_G0028999) Tecpr1 (MGP_SPRETEiJ_G0029000) Bri3 (MGP_SPRETEiJ_G0029001) Baiap2l1 (MGP_SPRETEiJ_G0029002) Nptx2 (MGP_SPRETEiJ_G0029003) Tmem130 (MGP_SPRETEiJ_G0029004) Trrap (MGP_SPRETEiJ_G0029005) Smurf1 (MGP_SPRETEiJ_G0029006) Kpna7 (MGP_SPRETEiJ_G0029007) Arpc1a (MGP_SPRETEiJ_G0029008) ##22 MGP_SPRETEiJ_G0029009 #22 Pdap1 (MGP_SPRETEiJ_G0029010) #23 Bud31 (MGP_SPRETEiJ_G0029011) #24 Ptcd1 (MGP_SPRETEiJ_G0029012) #25 Cpsf4 (MGP_SPRETEiJ_G0029013) #26 Atp5j2 (MGP_SPRETEiJ_G0029014) #27 Zkscan14 (MGP_SPRETEiJ_G0029015) Zkscan5 (MGP_SPRETEiJ_G0029016) Zfp655 (MGP_SPRETEiJ_G0029017) Zscan25 (MGP_SPRETEiJ_G0029018) MGP_SPRETEiJ_G0029019 MGP_SPRETEiJ_G0029020 MGP_SPRETEiJ_G0029021 Rnf6 (MGP_SPRETEiJ_G0029022) Cdk8 (MGP_SPRETEiJ_G0029023) Wasf3 (MGP_SPRETEiJ_G0029024) Mouse MODERN SPECIES 14 Ccz1 (ENSMUSG00000029617) Ocm (ENSMUSG00000029618) Lmtk2 (ENSMUSG00000038970) Bhlha15 (ENSMUSG00000052271) Tecpr1 (ENSMUSG00000066621) Bri3 (ENSMUSG00000047843) Baiap2l1 (ENSMUSG00000038859) Nptx2 (ENSMUSG00000059991) Tmem130 (ENSMUSG00000043388) Trrap (ENSMUSG00000045482) Smurf1 (ENSMUSG00000038780) Kpna7 (ENSMUSG00000038770) Gm4871 (ENSMUSG00000061707) 1700018F24Rik (ENSMUSG00000029620) Arpc1a (ENSMUSG00000029621) ##22 Arpc1b (ENSMUSG00000029622) #22 Pdap1 (ENSMUSG00000029623) #23 Bud31 (ENSMUSG00000038722) #24 Ptcd1 (ENSMUSG00000029624) #25 Cpsf4 (ENSMUSG00000029625) #26 Atp5j2 (ENSMUSG00000038690) #27 Zkscan14 (ENSMUSG00000029627) Zkscan5 (ENSMUSG00000055991) Zfp655 (ENSMUSG00000007812) Zscan25 (ENSMUSG00000070420) Cyp3a57 (ENSMUSG00000070419) Cyp3a16 (ENSMUSG00000038656) Cyp3a41b (ENSMUSG00000075552) Cyp3a41a (ENSMUSG00000075551) Cyp3a44 (ENSMUSG00000054417) Cyp3a11 (ENSMUSG00000056035) Ryukyu mouse MODERN SPECIES 14 Fpr-rs3 (MGP_CAROLIEiJ_G0027993) Ocm (MGP_CAROLIEiJ_G0027994) Lmtk2 (MGP_CAROLIEiJ_G0027995) Bhlha15 (MGP_CAROLIEiJ_G0027996) Tecpr1 (MGP_CAROLIEiJ_G0027997) Bri3 (MGP_CAROLIEiJ_G0027998) Baiap2l1 (MGP_CAROLIEiJ_G0027999) Nptx2 (MGP_CAROLIEiJ_G0028000) Tmem130 (MGP_CAROLIEiJ_G0028001) Trrap (MGP_CAROLIEiJ_G0028002) Smurf1 (MGP_CAROLIEiJ_G0028003) Kpna7 (MGP_CAROLIEiJ_G0028004) MGP_CAROLIEiJ_G0028005 MGP_CAROLIEiJ_G0028006 Arpc1a (MGP_CAROLIEiJ_G0028007) ##22 Arpc1b (MGP_CAROLIEiJ_G0028008) #22 Pdap1 (MGP_CAROLIEiJ_G0028009) #23 Bud31 (MGP_CAROLIEiJ_G0028010) #24 Ptcd1 (MGP_CAROLIEiJ_G0028011) #25 Cpsf4 (MGP_CAROLIEiJ_G0028012) #26 Atp5j2 (MGP_CAROLIEiJ_G0028013) #27 Zkscan14 (MGP_CAROLIEiJ_G0028014) Zkscan5 (MGP_CAROLIEiJ_G0028015) Zfp655 (MGP_CAROLIEiJ_G0028016) MGP_CAROLIEiJ_G0028017 MGP_CAROLIEiJ_G0028018 MGP_CAROLIEiJ_G0028020 MGP_CAROLIEiJ_G0028022 MGP_CAROLIEiJ_G0028021 MGP_CAROLIEiJ_G0028023 Rnf6 (MGP_CAROLIEiJ_G0028024) Mus_A ANCESTRAL SPECIES ENSGT00950000183183.b.b.x #22 Mus_B ANCESTRAL SPECIES ENSGT00950000183183.b.b.x #22 Mus_C ANCESTRAL SPECIES ENSGT00950000183183.b.b.x #22 Steppe mouse MODERN SPECIES 2132 ENSMSIG00000011660 ENSMSIG00000011768 #22 F9 (ENSMSIG00000011777) Shrew mouse MODERN SPECIES 15 MGP_PahariEiJ_G0024562 Rsph10b (MGP_PahariEiJ_G0024563) Ccz1 (MGP_PahariEiJ_G0024564) Ocm (MGP_PahariEiJ_G0024565) Lmtk2 (MGP_PahariEiJ_G0024566) Bhlha15 (MGP_PahariEiJ_G0024567) Tecpr1 (MGP_PahariEiJ_G0024568) Bri3 (MGP_PahariEiJ_G0024569) Baiap2l1 (MGP_PahariEiJ_G0024570) Nptx2 (MGP_PahariEiJ_G0024571) Tmem130 (MGP_PahariEiJ_G0024572) Trrap (MGP_PahariEiJ_G0024573) Smurf1 (MGP_PahariEiJ_G0024574) Kpna7 (MGP_PahariEiJ_G0024575) MGP_PahariEiJ_G0024576 ##22 Arpc1b (MGP_PahariEiJ_G0024577) #22 Pdap1 (MGP_PahariEiJ_G0024578) #23 Bud31 (MGP_PahariEiJ_G0024579) #24 Ptcd1 (MGP_PahariEiJ_G0024580) #25 Cpsf4 (MGP_PahariEiJ_G0024581) #26 Atp5j2 (MGP_PahariEiJ_G0024582) #27 Zkscan14 (MGP_PahariEiJ_G0024583) Zkscan5 (MGP_PahariEiJ_G0024584) Zfp655 (MGP_PahariEiJ_G0024585) Zscan25 (MGP_PahariEiJ_G0024586) MGP_PahariEiJ_G0024587 MGP_PahariEiJ_G0024589 MGP_PahariEiJ_G0024588 Rnf6 (MGP_PahariEiJ_G0024590) Cdk8 (MGP_PahariEiJ_G0024591) Wasf3 (MGP_PahariEiJ_G0024592) Rat MODERN SPECIES 3 Ccz1b (ENSRNOG00000001032) Ocm (ENSRNOG00000001031) Lmtk2 (ENSRNOG00000025155) Bhlha15 (ENSRNOG00000025164) Tecpr1 (ENSRNOG00000001010) Bri3 (ENSRNOG00000001009) Baiap2l1 (ENSRNOG00000001007) RGD1565131 (ENSRNOG00000025212) LOC100360200 (ENSRNOG00000025217) #26 Nptx2 (ENSRNOG00000001006) Tmem130 (ENSRNOG00000025235) Trrap (ENSRNOG00000025244) Smurf1 (ENSRNOG00000000999) Kpna7 (ENSRNOG00000042296) Arpc1a (ENSRNOG00000000996) ##22 Arpc1b (ENSRNOG00000000991) #22 Pdap1 (ENSRNOG00000000990) #23 Bud31 (ENSRNOG00000000989) #24 Ptcd1 (ENSRNOG00000000987) #25 Cpsf4 (ENSRNOG00000000985) #26 Atp5mf (ENSRNOG00000027049) #27 Zfp394 (ENSRNOG00000000983) Zkscan5 (ENSRNOG00000059552) Zfp655 (ENSRNOG00000060129) Zscan25 (ENSRNOG00000042213) Cyp3a23-3a1 (ENSRNOG00000067532) ENSRNOG00000062654 ENSRNOG00000063231 Cyp3a23-3a1 (ENSRNOG00000062027) Cyp3a2 (ENSRNOG00000032560) Cyp3a73 (ENSRNOG00000047745) Upper Galilee mountains blind mole rat MODERN SPECIES 1850 Rsph10b (ENSNGAG00000023731) Ccz1 (ENSNGAG00000004053) Ocm (ENSNGAG00000008617) Lmtk2 (ENSNGAG00000012019) Bhlha15 (ENSNGAG00000011836) Tecpr1 (ENSNGAG00000013589) Bri3 (ENSNGAG00000013902) Baiap2l1 (ENSNGAG00000018325) ENSNGAG00000014139 Nptx2 (ENSNGAG00000013356) Tmem130 (ENSNGAG00000017786) Trrap (ENSNGAG00000022892) Smurf1 (ENSNGAG00000008962) Kpna7 (ENSNGAG00000021193) ENSNGAG00000018383 ##22 Arpc1b (ENSNGAG00000015329) #22 Pdap1 (ENSNGAG00000017370) #23 ENSNGAG00000002694 #24 ENSNGAG00000015871 Cpsf4 (ENSNGAG00000001567) #26 ENSNGAG00000018916 #27 Zkscan14 (ENSNGAG00000023424) ENSNGAG00000023612 Zkscan5 (ENSNGAG00000017855) Zfp655 (ENSNGAG00000008217) Zscan25 (ENSNGAG00000021657) ENSNGAG00000010294 ENSNGAG00000000778 Lesser Egyptian jerboa MODERN SPECIES 250 Eif3b (ENSJJAG00000014658) Trrap (ENSJJAG00000015572) Smurf1 (ENSJJAG00000011991) Kpna7 (ENSJJAG00000010612) ENSJJAG00000011076 ##22 Arpc1b (ENSJJAG00000010687) #22 ENSJJAG00000008855 #23 Bud31 (ENSJJAG00000007925) #24 Ptcd1 (ENSJJAG00000000319) #25 Cpsf4 (ENSJJAG00000019426) #26 Atp5j2 (ENSJJAG00000018319) #27 Zkscan14 (ENSJJAG00000017218) Zkscan5 (ENSJJAG00000017033) Kangaroo rat MODERN SPECIES 387 Rsph10b (ENSDORG00000027674) ENSDORG00000028983 Ccz1 (ENSDORG00000013281) Ocm (ENSDORG00000012852) Lmtk2 (ENSDORG00000003934) Bhlha15 (ENSDORG00000026874) Tecpr1 (ENSDORG00000003936) ENSDORG00000027487 Baiap2l1 (ENSDORG00000007704) Nptx2 (ENSDORG00000002048) Tmem130 (ENSDORG00000008927) Trrap (ENSDORG00000016733) Smurf1 (ENSDORG00000001289) Kpna7 (ENSDORG00000001481) ENSDORG00000016059 ##22 Arpc1b (ENSDORG00000000737) #22 Pdap1 (ENSDORG00000000738) #23 ENSDORG00000000739 #24 Ptcd1 (ENSDORG00000000740) #25 Cpsf4 (ENSDORG00000000742) #26 Atp5j2 (ENSDORG00000000743) #27 Zkscan14 (ENSDORG00000006843) ENSDORG00000027431 ENSDORG00000029957 Zscan25 (ENSDORG00000024526) ENSDORG00000030120 ENSDORG00000012448 ENSDORG00000027377 Gjc3 (ENSDORG00000004757) Zkscan1 (ENSDORG00000025152) Zscan21 (ENSDORG00000009833) Tree shrew MODERN SPECIES 3419 TMEM130 (ENSTBEG00000001601) TRRAP (ENSTBEG00000002243) SMURF1 (ENSTBEG00000008251) KPNA7 (ENSTBEG00000009007) ENSTBEG00000009317 ARPC1B (ENSTBEG00000009902) #22 PDAP1 (ENSTBEG00000010152) #23 BUD31 (ENSTBEG00000010640) #24 PTCD1 (ENSTBEG00000011021) #25 CPSF4 (ENSTBEG00000011406) #26 ENSTBEG00000012332 #27 Primates ANCESTRAL SPECIES 11 ENSGT00940000170143 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.a ENSGT01090000260018.B.b Strepsirrhini ANCESTRAL SPECIES 14 ENSGT00940000170143 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.a.b ENSGT00950000182958.a.b.b.i.a.a Lemuriformes ANCESTRAL SPECIES 6 ENSGT00940000170143 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.s.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.a.a ENSGT00950000182958.a.b.b.i.a.b Lemuriformes_a ANCESTRAL SPECIES 16 ENSGT00940000170143 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.s.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.a.a ENSGT00940000165702 Coquerels sifaka MODERN SPECIES 155 PMS2 (ENSPCOG00000019462) ENSPCOG00000024104 ENSPCOG00000025277 ENSPCOG00000017766 LMTK2 (ENSPCOG00000025104) TECPR1 (ENSPCOG00000015825) BRI3 (ENSPCOG00000000280) BAIAP2L1 (ENSPCOG00000022611) NPTX2 (ENSPCOG00000024897) TMEM130 (ENSPCOG00000025459) TRRAP (ENSPCOG00000021914) SMURF1 (ENSPCOG00000023089) KPNA7 (ENSPCOG00000026168) ENSPCOG00000017933 ENSPCOG00000013572 ##22 ARPC1B (ENSPCOG00000010552) #22 PDAP1 (ENSPCOG00000024638) #23 BUD31 (ENSPCOG00000016931) #24 PTCD1 (ENSPCOG00000018596) #25 CPSF4 (ENSPCOG00000012771) #26 ATP5MF (ENSPCOG00000027298) #27 ZNF789 (ENSPCOG00000020262) ZNF394 (ENSPCOG00000025668) ZKSCAN5 (ENSPCOG00000024797) ZNF655 (ENSPCOG00000017676) TMEM225B (ENSPCOG00000020944) ZSCAN25 (ENSPCOG00000020153) ENSPCOG00000002834 ENSPCOG00000023160 CYP3A201 (ENSPCOG00000018451) CYP3A5 (ENSPCOG00000018679) Greater bamboo lemur MODERN SPECIES 522 ENSPSMG00000003157 ENSPSMG00000003259 ENSPSMG00000003348 LMTK2 (ENSPSMG00000003391) BHLHA15 (ENSPSMG00000003426) TECPR1 (ENSPSMG00000003451) BRI3 (ENSPSMG00000003477) BAIAP2L1 (ENSPSMG00000003502) NPTX2 (ENSPSMG00000003510) ENSPSMG00000003514 TMEM130 (ENSPSMG00000003560) TRRAP (ENSPSMG00000004004) SMURF1 (ENSPSMG00000004395) KPNA7 (ENSPSMG00000004499) ARPC1A (ENSPSMG00000004536) ##22 ARPC1B (ENSPSMG00000004575) #22 PDAP1 (ENSPSMG00000004603) #23 BUD31 (ENSPSMG00000004621) #24 PTCD1 (ENSPSMG00000004631) #25 CPSF4 (ENSPSMG00000004691) #26 ATP5MF (ENSPSMG00000004717) #27 ENSPSMG00000004726 ZNF789 (ENSPSMG00000004734) ENSPSMG00000004745 ZKSCAN5 (ENSPSMG00000004768) ENSPSMG00000004779 FAM200A (ENSPSMG00000004785) ZNF655 (ENSPSMG00000004861) TMEM225B (ENSPSMG00000004872) ZSCAN25 (ENSPSMG00000004884) ENSPSMG00000004900 Mouse lemur MODERN SPECIES 8 ENSMICG00000012751 ENSMICG00000042503 ENSMICG00000046401 LMTK2 (ENSMICG00000002866) BHLHA15 (ENSMICG00000036615) TECPR1 (ENSMICG00000002874) ENSMICG00000043223 BAIAP2L1 (ENSMICG00000002891) NPTX2 (ENSMICG00000002901) TMEM130 (ENSMICG00000002904) TRRAP (ENSMICG00000002909) SMURF1 (ENSMICG00000042244) KPNA7 (ENSMICG00000017420) ENSMICG00000017421 ENSMICG00000017423 ##22 ARPC1B (ENSMICG00000017424) #22 PDAP1 (ENSMICG00000017425) #23 ENSMICG00000017426 #24 PTCD1 (ENSMICG00000017428) #25 CPSF4 (ENSMICG00000017429) #26 ENSMICG00000044867 #27 ENSMICG00000034093 ZNF789 (ENSMICG00000005979) ZNF394 (ENSMICG00000005987) ZKSCAN5 (ENSMICG00000005991) ZNF655 (ENSMICG00000006010) TMEM225B (ENSMICG00000029262) ZSCAN25 (ENSMICG00000006018) ENSMICG00000014650 ENSMICG00000006024 TRIM4 (ENSMICG00000005567) Bushbaby MODERN SPECIES 257 ENSOGAG00000001126 ENSOGAG00000027379 ENSOGAG00000007674 LMTK2 (ENSOGAG00000010100) BHLHA15 (ENSOGAG00000010106) TECPR1 (ENSOGAG00000010108) ENSOGAG00000000638 BAIAP2L1 (ENSOGAG00000000639) NPTX2 (ENSOGAG00000000640) TMEM130 (ENSOGAG00000000642) TRRAP (ENSOGAG00000000643) SMURF1 (ENSOGAG00000009903) ENSOGAG00000031106 ENSOGAG00000028575 ARPC1A (ENSOGAG00000010870) ##22 ARPC1B (ENSOGAG00000010872) #22 ENSOGAG00000010874 #23 BUD31 (ENSOGAG00000010875) #24 PTCD1 (ENSOGAG00000010877) #25 CPSF4 (ENSOGAG00000010884) #26 ENSOGAG00000032002 ZNF394 (ENSOGAG00000025525) ZKSCAN5 (ENSOGAG00000010899) FAM200A (ENSOGAG00000026707) ZNF655 (ENSOGAG00000009915) TMEM225B (ENSOGAG00000032661) ZSCAN25 (ENSOGAG00000011024) CYP3A4 (ENSOGAG00000011021) CYP3A169 (ENSOGAG00000004122) ENSOGAG00000004125 ENSOGAG00000032785 Haplorrhini ANCESTRAL SPECIES 26 ENSGT00940000170143 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986 #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.a ENSGT01090000260018.B.b ENSGT00940000163330 Tarsier MODERN SPECIES 4203 ENSTSYG00000009967 ARPC1A (ENSTSYG00000003574) ##22 ARPC1B (ENSTSYG00000033630) #22 PDAP1 (ENSTSYG00000035864) #23 BUD31 (ENSTSYG00000026135) #24 PTCD1 (ENSTSYG00000029495) #25 CPSF4 (ENSTSYG00000005712) #26 ATP5MF (ENSTSYG00000026376) #27 ZNF394 (ENSTSYG00000013540) ZNF789 (ENSTSYG00000031696) ZKSCAN5 (ENSTSYG00000014107) ZNF655 (ENSTSYG00000002676) TMEM225B (ENSTSYG00000032314) ZSCAN25 (ENSTSYG00000033603) ENSTSYG00000009030 Simiiformes ANCESTRAL SPECIES 26 ENSGT00940000170143 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.n #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a ENSGT00950000182958.a.b.b.i.b.b ENSGT00950000182958.a.b.b.i.a Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00950000183183.b.b.y #22 Cebidae ANCESTRAL SPECIES ENSGT00950000183183.b.b.y #22 Cebidae_a ANCESTRAL SPECIES 19 ENSGT00940000155381 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a.c ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B.i.a ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b.y #22 ENSGT00950000183183.b.b.z.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300.`b #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.n.c #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a ENSGT00950000182958.a.b.b.i.b.b ENSGT00940000163330 Capuchin MODERN SPECIES 82 ENSCCAG00000023211 ENSCCAG00000000590 ENSCCAG00000008446 ENSCCAG00000027694 LMTK2 (ENSCCAG00000021992) TECPR1 (ENSCCAG00000022147) BRI3 (ENSCCAG00000022002) BAIAP2L1 (ENSCCAG00000022124) NPTX2 (ENSCCAG00000021986) TMEM130 (ENSCCAG00000021884) TRRAP (ENSCCAG00000031555) SMURF1 (ENSCCAG00000037956) ENSCCAG00000037962 ENSCCAG00000024944 ARPC1A (ENSCCAG00000019780) ##22 ENSCCAG00000037322 #22 PDAP1 (ENSCCAG00000031892) #23 BUD31 (ENSCCAG00000021788) #24 PTCD1 (ENSCCAG00000034025) #25 CPSF4 (ENSCCAG00000028291) #26 ENSCCAG00000017059 #27 ENSCCAG00000020703 ZNF394 (ENSCCAG00000027351) ZNF789 (ENSCCAG00000025456) ZKSCAN5 (ENSCCAG00000030902) ZNF655 (ENSCCAG00000022358) TMEM225B (ENSCCAG00000018539) ENSCCAG00000037804 ZSCAN25 (ENSCCAG00000037223) CYP3A5 (ENSCCAG00000034158) CYP3A90 (ENSCCAG00000036748) Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00950000183183.b.b.z.a #22 Cebidae ANCESTRAL SPECIES 24 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a.c ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B.i.a ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b.z.a #22 ENSGT00950000183183.b.b.z.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300.`b #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.n #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a ENSGT00950000182958.a.b.b.i.b.b ENSGT00940000163330 Cebidae_a ANCESTRAL SPECIES ENSGT00950000183183.b.b.z.a #22 Capuchin MODERN SPECIES 762 ENSCCAG00000022023 #22 PROS1 (ENSCCAG00000007509) ARL13B (ENSCCAG00000024532) ENSCCAG00000020571 NSUN3 (ENSCCAG00000019943) Marmoset MODERN SPECIES 11 ENSCJAG00000015308 ENSCJAG00000015269 ENSCJAG00000015258 LMTK2 (ENSCJAG00000015240) BHLHA15 (ENSCJAG00000023085) TECPR1 (ENSCJAG00000033050) BRI3 (ENSCJAG00000071589) BAIAP2L1 (ENSCJAG00000031937) NPTX2 (ENSCJAG00000015220) ENSCJAG00000078860 TMEM130 (ENSCJAG00000016109) TRRAP (ENSCJAG00000016008) SMURF1 (ENSCJAG00000046325) KPNA7 (ENSCJAG00000015943) ENSCJAG00000015859 ##22 ENSCJAG00000015849 #22 PDAP1 (ENSCJAG00000015838) #23 BUD31 (ENSCJAG00000015836) #24 PTCD1 (ENSCJAG00000015815) #25 CPSF4 (ENSCJAG00000015826) #26 ATP5MF (ENSCJAG00000045628) #27 ZNF789 (ENSCJAG00000015813) ZKSCAN5 (ENSCJAG00000015788) ZNF394 (ENSCJAG00000015808) ZNF655 (ENSCJAG00000032195) TMEM225B (ENSCJAG00000033315) ZSCAN25 (ENSCJAG00000015783) CYP3A90 (ENSCJAG00000064350) CYP3A5 (ENSCJAG00000064981) CYP3A4 (ENSCJAG00000015744) TRIM4 (ENSCJAG00000015702) Mas night monkey MODERN SPECIES 514 ENSANAG00000025161 UXS1 (ENSANAG00000029989) ENSANAG00000036314 ECRG4 (ENSANAG00000025705) ENSANAG00000025417 ENSANAG00000034596 ENSANAG00000031830 ENSANAG00000022431 #22 NCK2 (ENSANAG00000032429) ENSANAG00000031587 ENSANAG00000030079 ENSANAG00000026010 MALL (ENSANAG00000025387) Platyrrhini ANCESTRAL SPECIES 19 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a.c ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B.i.a ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b.z.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300.`b #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.n #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a ENSGT00950000182958.a.b.b.i.b.b ENSGT00940000163330 ENSGT01090000260005.a.a.a.a Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 556 PMS2 (ENSANAG00000030348) ENSANAG00000008157 ENSANAG00000034191 ENSANAG00000024814 LMTK2 (ENSANAG00000030215) TECPR1 (ENSANAG00000034833) BRI3 (ENSANAG00000027654) ENSANAG00000024350 NPTX2 (ENSANAG00000037968) TMEM130 (ENSANAG00000034905) TRRAP (ENSANAG00000031335) SMURF1 (ENSANAG00000031906) ENSANAG00000024791 ENSANAG00000019992 ARPC1A (ENSANAG00000038029) ##22 ENSANAG00000023601 #22 PDAP1 (ENSANAG00000035351) #23 ENSANAG00000027119 #24 PTCD1 (ENSANAG00000035790) #25 CPSF4 (ENSANAG00000021360) #26 ATP5MF (ENSANAG00000021638) #27 ZNF394 (ENSANAG00000030792) ZNF789 (ENSANAG00000028480) ZKSCAN5 (ENSANAG00000032873) ZNF655 (ENSANAG00000029025) TMEM225B (ENSANAG00000035558) ZSCAN25 (ENSANAG00000020427) ENSANAG00000022722 CYP3A5 (ENSANAG00000032272) TRIM4 (ENSANAG00000036020) GJC3 (ENSANAG00000030391) Mas night monkey MODERN SPECIES 478 CRYBG1 (ENSANAG00000023839) RTN4IP1 (ENSANAG00000037479) ENSANAG00000003965 ENSANAG00000037838 ENSANAG00000036990 ENSANAG00000037315 BEND3 (ENSANAG00000021126) PDSS2 (ENSANAG00000015555) SOBP (ENSANAG00000034007) ENSANAG00000025986 SCML4 (ENSANAG00000021645) SEC63 (ENSANAG00000022108) ENSANAG00000019987 ENSANAG00000037950 NR2E1 (ENSANAG00000020325) ENSANAG00000030536 #22 SNX3 (ENSANAG00000028701) AFG1L (ENSANAG00000033061) ENSANAG00000023931 ARMC2 (ENSANAG00000027283) SESN1 (ENSANAG00000026899) CEP57L1 (ENSANAG00000031702) ENSANAG00000036298 CD164 (ENSANAG00000012591) PPIL6 (ENSANAG00000023713) SMPD2 (ENSANAG00000028732) MICAL1 (ENSANAG00000034803) ZBTB24 (ENSANAG00000023992) AK9 (ENSANAG00000028754) FIG4 (ENSANAG00000026338) GPR6 (ENSANAG00000024209) Cebidae ANCESTRAL SPECIES 24 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a.c ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B.i.a ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b.z.a #22 ENSGT00950000183183.b.b.z.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300.`b #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.n #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a ENSGT00950000182958.a.b.b.i.b.b ENSGT00940000163330 ENSGT01090000260005.a.a.a.a Cebidae_a ANCESTRAL SPECIES 19 ENSGT00940000159899 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a.c ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B.i.a ENSGT00940000160705.C.b ENSGT00950000183183.b.a ##22 ENSGT00950000183183.b.b.y #22 ENSGT00950000183183.b.b.z.b #22 ENSGT00390000018509.a #23 ENSGT00390000014300.`b #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.n.c #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00760000119441 ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a ENSGT00950000182958.a.b.b.i.b.b ENSGT00940000163330 ENSGT01090000260005.a.a.a.a Bolivian squirrel monkey MODERN SPECIES 104 ENSSBOG00000027924 PMS2 (ENSSBOG00000028728) ENSSBOG00000031799 ENSSBOG00000032415 ENSSBOG00000021103 LMTK2 (ENSSBOG00000035095) TECPR1 (ENSSBOG00000018971) ENSSBOG00000032858 ENSSBOG00000018064 NPTX2 (ENSSBOG00000029192) TMEM130 (ENSSBOG00000023597) TRRAP (ENSSBOG00000022151) SMURF1 (ENSSBOG00000026488) ENSSBOG00000032329 ENSSBOG00000035988 ARPC1B (ENSSBOG00000017784) #22 ENSSBOG00000035146 #23 BUD31 (ENSSBOG00000027048) #24 PTCD1 (ENSSBOG00000024114) #25 CPSF4 (ENSSBOG00000020493) #26 ATP5MF (ENSSBOG00000032284) #27 ZNF394 (ENSSBOG00000026184) ZNF789 (ENSSBOG00000027974) ZKSCAN5 (ENSSBOG00000020293) ZNF655 (ENSSBOG00000023361) TMEM225B (ENSSBOG00000035101) ZSCAN25 (ENSSBOG00000032849) CYP3A90 (ENSSBOG00000022364) CYP3A5 (ENSSBOG00000030571) CYP3A4 (ENSSBOG00000035505) TRIM4 (ENSSBOG00000032029) Marmoset MODERN SPECIES 18 AKAP13 (ENSCJAG00000009388) ENSCJAG00000057743 ENSCJAG00000052178 ADAMTS7 (ENSCJAG00000002181) MORF4L1 (ENSCJAG00000002214) ENSCJAG00000002305 ENSCJAG00000085127 RASGRF1 (ENSCJAG00000002316) ANKRD34C (ENSCJAG00000005284) TMED3 (ENSCJAG00000005277) ENSCJAG00000080331 ENSCJAG00000063236 ENSCJAG00000087217 ENSCJAG00000078641 ENSCJAG00000086335 ENSCJAG00000043892 #22 ENSCJAG00000076001 ENSCJAG00000008511 ENSCJAG00000079776 ENSCJAG00000081875 ENSCJAG00000087135 MTHFS (ENSCJAG00000007560) BCL2A1 (ENSCJAG00000007569) ENSCJAG00000074804 ZFAND6 (ENSCJAG00000007572) FAH (ENSCJAG00000007600) ENSCJAG00000062260 ARNT2 (ENSCJAG00000007640) ABHD17C (ENSCJAG00000007705) CEMIP (ENSCJAG00000007708) MESD (ENSCJAG00000048641) Catarrhini ANCESTRAL SPECIES 6 ENSGT00940000170143 ENSGT00390000004713.c ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.n #23 ENSGT00390000018509.a.m #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00390000002944.e.b ENSGT00510000046986.n.a #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00940000170143 ENSGT00390000004713.c ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.m #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.n.a.d #27 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.c #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 46 ENSGT00390000017980.hb ENSGT00910000148510 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b.`b #22 ENSGT00390000018509.a.m #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.n.a.d.d #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a ENSGT00950000182958.a.b.b.i.b.b.c.b.c ENSGT00950000182958.a.b.b.i.b.b.c.a Golden snub-nosed monkey MODERN SPECIES 1891 TMEM130 (ENSRROG00000041705) TRRAP (ENSRROG00000038566) SMURF1 (ENSRROG00000033605) KPNA7 (ENSRROG00000038253) ENSRROG00000029302 ARPC1A (ENSRROG00000034397) ##22 ENSRROG00000039173 #22 ENSRROG00000040014 #23 BUD31 (ENSRROG00000036579) #24 PTCD1 (ENSRROG00000036420) #25 CPSF4 (ENSRROG00000040431) #26 ENSRROG00000035599 #27 ZNF789 (ENSRROG00000024718) ZNF394 (ENSRROG00000034088) ZKSCAN5 (ENSRROG00000034392) FAM200A (ENSRROG00000018629) ZNF655 (ENSRROG00000044389) TMEM225B (ENSRROG00000025234) ZSCAN25 (ENSRROG00000043347) CYP3A5 (ENSRROG00000032359) ENSRROG00000042643 Black snub-nosed monkey MODERN SPECIES 191 ZNF701 (ENSRBIG00000038188) ENSRBIG00000028970 ENSRBIG00000037488 ENSRBIG00000037978 RORA (ENSRBIG00000022050) ICE2 (ENSRBIG00000030556) ENSRBIG00000029223 ANXA2 (ENSRBIG00000041394) NPTX2 (ENSRBIG00000037271) TMEM130 (ENSRBIG00000038360) TRRAP (ENSRBIG00000043840) SMURF1 (ENSRBIG00000035136) KPNA7 (ENSRBIG00000032648) ENSRBIG00000026342 ARPC1A (ENSRBIG00000034019) ##22 ARPC1B (ENSRBIG00000022904) #22 Rhinopithecus ANCESTRAL SPECIES ENSGT00950000183183.b.b.ab #22 Golden snub-nosed monkey MODERN SPECIES 1578 ENSRROG00000026908 ENSRROG00000027315 ENSRROG00000031835 ENSRROG00000025317 #22 GALC (ENSRROG00000032715) GPR65 (ENSRROG00000012184) Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00940000170143 ENSGT00390000004713.c.h ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.m #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.n.a.c.b #27 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.c.a #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00940000170143 ENSGT00390000004713.c.h ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.m #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.n.a.c.b #27 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.c.a #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a Cercopithecinae_b ANCESTRAL SPECIES 36 ENSGT00390000004713.c.g ENSGT00390000004713.c.h ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.m #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.c.a #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a ENSGT00950000182958.a.b.b.i.b.b.c.b.d Olive baboon MODERN SPECIES 14 ENSPANG00000051135 ENSPANG00000008247 ENSPANG00000035903 ENSPANG00000033390 LMTK2 (ENSPANG00000023289) BHLHA15 (ENSPANG00000010823) TECPR1 (ENSPANG00000020539) BRI3 (ENSPANG00000015667) BAIAP2L1 (ENSPANG00000024563) NPTX2 (ENSPANG00000009445) TMEM130 (ENSPANG00000009013) TRRAP (ENSPANG00000006931) SMURF1 (ENSPANG00000023126) KPNA7 (ENSPANG00000021499) ARPC1A (ENSPANG00000032757) ##22 ARPC1B (ENSPANG00000023245) #22 ENSPANG00000025132 #23 BUD31 (ENSPANG00000006779) #24 PTCD1 (ENSPANG00000016730) #25 CPSF4 (ENSPANG00000023123) #26 ENSPANG00000030778 #27 ENSPANG00000009919 ZNF789 (ENSPANG00000009920) ZKSCAN5 (ENSPANG00000000548) FAM200A (ENSPANG00000018803) ENSPANG00000018842 TMEM225B (ENSPANG00000008632) ZSCAN25 (ENSPANG00000023896) CYP3A5 (ENSPANG00000023122) CYP3A7 (ENSPANG00000008155) CYP3A4 (ENSPANG00000017641) Cercopithecinae_d ANCESTRAL SPECIES 75 ENSGT00940000159899 ENSGT00390000004713.c.g ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.m #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.c.a #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a ENSGT00950000182958.a.b.b.i.b.b.c.b.d Sooty mangabey MODERN SPECIES 630 ENSCATG00000011606 ENSCATG00000042940 LMTK2 (ENSCATG00000037130) ENSCATG00000017491 BHLHA15 (ENSCATG00000021737) TECPR1 (ENSCATG00000043836) BRI3 (ENSCATG00000039656) BAIAP2L1 (ENSCATG00000033297) NPTX2 (ENSCATG00000035885) TMEM130 (ENSCATG00000034901) TRRAP (ENSCATG00000032049) SMURF1 (ENSCATG00000019164) KPNA7 (ENSCATG00000016098) ENSCATG00000045237 ARPC1A (ENSCATG00000034511) ##22 ARPC1B (ENSCATG00000037261) #22 ENSCATG00000037918 #23 BUD31 (ENSCATG00000042456) #24 PTCD1 (ENSCATG00000040859) #25 CPSF4 (ENSCATG00000038440) #26 ENSCATG00000030778 ENSCATG00000040640 #27 ZNF789 (ENSCATG00000042095) ZNF394 (ENSCATG00000042636) ZKSCAN5 (ENSCATG00000043807) FAM200A (ENSCATG00000007135) ZNF655 (ENSCATG00000041092) TMEM225B (ENSCATG00000038153) ZSCAN25 (ENSCATG00000010757) CYP3A7 (ENSCATG00000036704) CYP3A43 (ENSCATG00000033186) Drill DUPLICATION Drill MODERN SPECIES 930 ENSMLEG00000030927 ENSMLEG00000030378 ENSMLEG00000037262 LMTK2 (ENSMLEG00000033242) BHLHA15 (ENSMLEG00000005175) TECPR1 (ENSMLEG00000033546) BRI3 (ENSMLEG00000038264) BAIAP2L1 (ENSMLEG00000030011) NPTX2 (ENSMLEG00000034636) TMEM130 (ENSMLEG00000024016) TRRAP (ENSMLEG00000020926) SMURF1 (ENSMLEG00000041278) KPNA7 (ENSMLEG00000041680) ENSMLEG00000036464 ARPC1A (ENSMLEG00000031614) ##22 ENSMLEG00000041405 #22 ENSMLEG00000031168 #22 ENSMLEG00000029041 #23 BUD31 (ENSMLEG00000035118) #24 PTCD1 (ENSMLEG00000031179) #25 CPSF4 (ENSMLEG00000034721) #26 ATP5MF (ENSMLEG00000043000) #27 ZNF394 (ENSMLEG00000040037) ZNF789 (ENSMLEG00000041142) ZKSCAN5 (ENSMLEG00000034683) FAM200A (ENSMLEG00000001071) ZNF655 (ENSMLEG00000041871) TMEM225B (ENSMLEG00000037236) ZSCAN25 (ENSMLEG00000006141) CYP3A5 (ENSMLEG00000042908) CYP3A67 (ENSMLEG00000035821) Drill MODERN SPECIES 930 ENSMLEG00000030378 ENSMLEG00000037262 LMTK2 (ENSMLEG00000033242) BHLHA15 (ENSMLEG00000005175) TECPR1 (ENSMLEG00000033546) BRI3 (ENSMLEG00000038264) BAIAP2L1 (ENSMLEG00000030011) NPTX2 (ENSMLEG00000034636) TMEM130 (ENSMLEG00000024016) TRRAP (ENSMLEG00000020926) SMURF1 (ENSMLEG00000041278) KPNA7 (ENSMLEG00000041680) ENSMLEG00000036464 ARPC1A (ENSMLEG00000031614) ##22 ENSMLEG00000041405 #22 ENSMLEG00000031168 #22 ENSMLEG00000029041 #23 BUD31 (ENSMLEG00000035118) #24 PTCD1 (ENSMLEG00000031179) #25 CPSF4 (ENSMLEG00000034721) #26 ATP5MF (ENSMLEG00000043000) #27 ZNF394 (ENSMLEG00000040037) ZNF789 (ENSMLEG00000041142) ZKSCAN5 (ENSMLEG00000034683) FAM200A (ENSMLEG00000001071) ZNF655 (ENSMLEG00000041871) TMEM225B (ENSMLEG00000037236) ZSCAN25 (ENSMLEG00000006141) CYP3A5 (ENSMLEG00000042908) CYP3A67 (ENSMLEG00000035821) CYP3A7 (ENSMLEG00000042648) Macaca ANCESTRAL SPECIES 3 ENSGT00940000159899 ENSGT00390000004713.c.g ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.m #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.n.a.c.a.b #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a ENSGT00950000182958.a.b.b.i.b.b.c.b.c.b ENSGT00950000182958.a.b.b.i.b.b.c.b.d Macaca_a ANCESTRAL SPECIES 7 ENSGT00940000158475 ENSGT00510000047886.a ENSGT00940000167990.a ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT01100000263539.b.a.a.a.a.b.a.b.b.a.d.a ENSGT00950000183188.A.b ENSGT01080000257579.b.b.b.a.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT01100000263539.b.a.a.a.a.a.a.a.b.b.b.a.b.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.m #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00510000046986.n.a.c.b #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00950000182958.a.b.b.i.b.a ENSGT00950000182958.a.b.b.i.b.b.c.b.d ENSGT00950000182958.a.b.b.i.b.b.c.a Crab-eating macaque MODERN SPECIES 13 ENSMFAG00000047484 ENSMFAG00000059369 ENSMFAG00000049779 ENSMFAG00000036994 BAIAP2L1 (ENSMFAG00000037269) NPTX2 (ENSMFAG00000039583) ENSMFAG00000047721 TMEM130 (ENSMFAG00000040311) ENSMFAG00000063130 TRRAP (ENSMFAG00000039475) SMURF1 (ENSMFAG00000033436) KPNA7 (ENSMFAG00000031709) ENSMFAG00000062641 ENSMFAG00000052918 ARPC1A (ENSMFAG00000003138) ##22 ARPC1B (ENSMFAG00000046299) #22 ENSMFAG00000053643 ENSMFAG00000003092 #23 BUD31 (ENSMFAG00000035579) #24 PTCD1 (ENSMFAG00000041324) #25 ENSMFAG00000051467 CPSF4 (ENSMFAG00000001462) #26 ENSMFAG00000036062 #27 ZNF789 (ENSMFAG00000041302) ZNF394 (ENSMFAG00000045342) ZKSCAN5 (ENSMFAG00000037519) FAM200A (ENSMFAG00000030317) ZNF655 (ENSMFAG00000037712) TMEM225B (ENSMFAG00000045372) ZSCAN25 (ENSMFAG00000046015) ENSMFAG00000054128 Pig-tailed macaque MODERN SPECIES 80 ENSMNEG00000034328 ENSMNEG00000031130 ENSMNEG00000036828 LMTK2 (ENSMNEG00000038154) BHLHA15 (ENSMNEG00000021350) TECPR1 (ENSMNEG00000039715) BRI3 (ENSMNEG00000000029) BAIAP2L1 (ENSMNEG00000027564) NPTX2 (ENSMNEG00000031035) TMEM130 (ENSMNEG00000034143) TRRAP (ENSMNEG00000011245) SMURF1 (ENSMNEG00000030527) KPNA7 (ENSMNEG00000043325) ENSMNEG00000043344 ARPC1A (ENSMNEG00000045309) ##22 ARPC1B (ENSMNEG00000032941) #22 ENSMNEG00000038469 #23 BUD31 (ENSMNEG00000034239) #24 PTCD1 (ENSMNEG00000043786) #25 CPSF4 (ENSMNEG00000032306) #26 ENSMNEG00000044753 #27 ZNF394 (ENSMNEG00000044404) ZNF789 (ENSMNEG00000034945) ZKSCAN5 (ENSMNEG00000036993) FAM200A (ENSMNEG00000009524) ZNF655 (ENSMNEG00000032786) TMEM225B (ENSMNEG00000039756) ZSCAN25 (ENSMNEG00000026859) CYP3A5 (ENSMNEG00000029025) ENSMNEG00000019082 CYP3A4 (ENSMNEG00000031776) Hominoidea ANCESTRAL SPECIES 6 ENSGT00940000154303.B ENSGT00390000004713.d ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486 ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.n.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00390000002944.e.b ENSGT00510000046986.n.a #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00940000156593.wc.a ENSGT00950000182958.a.b.b.i.b.a Gibbon MODERN SPECIES 7 ENSNLEG00000035464 LMTK2 (ENSNLEG00000010627) ENSNLEG00000027958 BHLHA15 (ENSNLEG00000018875) TECPR1 (ENSNLEG00000010642) ENSNLEG00000012944 ENSNLEG00000035321 BAIAP2L1 (ENSNLEG00000033877) ENSNLEG00000010697 TMEM130 (ENSNLEG00000010699) TRRAP (ENSNLEG00000027081) SMURF1 (ENSNLEG00000010717) KPNA7 (ENSNLEG00000010827) ENSNLEG00000032444 ARPC1A (ENSNLEG00000010852) ##22 ENSNLEG00000026790 #22 PDAP1 (ENSNLEG00000011017) #23 BUD31 (ENSNLEG00000011020) #24 PTCD1 (ENSNLEG00000011060) #25 ENSNLEG00000011100 CPSF4 (ENSNLEG00000011074) #26 ATP5MF (ENSNLEG00000011101) #27 ZNF789 (ENSNLEG00000011123) ZNF394 (ENSNLEG00000035314) ZKSCAN5 (ENSNLEG00000011141) FAM200A (ENSNLEG00000011174) ZNF655 (ENSNLEG00000030892) TMEM225B (ENSNLEG00000011185) ZSCAN25 (ENSNLEG00000029330) ENSNLEG00000032867 CYP3A5 (ENSNLEG00000035706) Hominidae ANCESTRAL SPECIES 26 ENSGT00940000155974.i.a ENSGT00390000004713.d ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486.g.a ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.n.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.a #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00940000156593.wc.a ENSGT00950000182958.a.b.b.i.b.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 15 ENSGT00390000004713.d.a ENSGT00940000161875.c.b ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486.g.a ENSGT00940000153560.b.b.a ENSGT00950000183087.A.a.b.a.g.b.a.b ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.n.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.a.a #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00940000156593.wc.a ENSGT00950000182958.a.b.b.i.b.a Homo/Pan group ANCESTRAL SPECIES 15 ENSGT00390000004713.d.a ENSGT00940000161875.c.b ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486.g.a ENSGT00940000153560.b.b.a ENSGT00950000183087.A.a.b.a.g.b.a.b ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.n.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.a.a #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00940000156593.wc.a ENSGT00950000182958.a.b.b.i.b.a Pan ANCESTRAL SPECIES 13 ENSGT00390000001994.u ENSGT00390000004713.d.a ENSGT00940000161875.c.b ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a ENSGT00510000048486.g.a ENSGT00940000153560.b.b.a ENSGT01060000248591.a.a.a.a ENSGT00950000183188.A.b ENSGT00390000017961 ENSGT00940000158690 ENSGT01050000244891.B ENSGT00940000160705.C.b ENSGT00950000183183.b.a.y.a.b ##22 ENSGT00950000183183.b.b #22 ENSGT00390000018509.a.n.a #23 ENSGT00390000014300 #24 ENSGT00940000153974.A #25 ENSGT00940000155520 #26 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.a.a #27 ENSGT00940000163495 ENSGT00940000162347 ENSGT00940000162299 ENSGT00940000164024 ENSGT00760000119441.a ENSGT00510000055200 ENSGT00940000162113 ENSGT00940000156593.wc.a ENSGT00950000182958.a.b.b.i.b.a Bonobo MODERN SPECIES 20 TAC1 (ENSPPAG00000033152) ASNS (ENSPPAG00000033201) ENSPPAG00000027488 LMTK2 (ENSPPAG00000032735) BHLHA15 (ENSPPAG00000038305) TECPR1 (ENSPPAG00000036532) ENSPPAG00000031565 BAIAP2L1 (ENSPPAG00000037144) ENSPPAG00000032935 TMEM130 (ENSPPAG00000016661) TRRAP (ENSPPAG00000036292) SMURF1 (ENSPPAG00000031727) KPNA7 (ENSPPAG00000040756) ENSPPAG00000032160 ARPC1A (ENSPPAG00000032222) ##22 ARPC1B (ENSPPAG00000029449) #22 PDAP1 (ENSPPAG00000031378) #23 BUD31 (ENSPPAG00000040700) #24 PTCD1 (ENSPPAG00000036024) #25 CPSF4 (ENSPPAG00000043355) #26 ENSPPAG00000042587 ATP5MF (ENSPPAG00000036976) #27 ZNF789 (ENSPPAG00000040508) ZNF394 (ENSPPAG00000036746) ZKSCAN5 (ENSPPAG00000035814) FAM200A (ENSPPAG00000025979) ZNF655 (ENSPPAG00000041610) TMEM225B (ENSPPAG00000040983) ZSCAN25 (ENSPPAG00000043285) ENSPPAG00000035255 CYP3A5 (ENSPPAG00000038928) Chimpanzee MODERN SPECIES 20 ENSPTRG00000046532 OCM2 (ENSPTRG00000019432) LMTK2 (ENSPTRG00000019433) BHLHA15 (ENSPTRG00000019434) TECPR1 (ENSPTRG00000028478) BRI3 (ENSPTRG00000019436) BAIAP2L1 (ENSPTRG00000019438) ENSPTRG00000049708 NPTX2 (ENSPTRG00000019440) TMEM130 (ENSPTRG00000045055) TRRAP (ENSPTRG00000019442) SMURF1 (ENSPTRG00000019444) KPNA7 (ENSPTRG00000019446) MYH16 (ENSPTRG00000052047) ARPC1A (ENSPTRG00000033819) ##22 ARPC1B (ENSPTRG00000019449) #22 PDAP1 (ENSPTRG00000041711) #23 BUD31 (ENSPTRG00000019451) #24 PTCD1 (ENSPTRG00000019452) #25 CPSF4 (ENSPTRG00000019453) #26 ENSPTRG00000046696 ATP5MF (ENSPTRG00000044099) #27 ZNF789 (ENSPTRG00000023303) ZNF394 (ENSPTRG00000019456) ZKSCAN5 (ENSPTRG00000019455) FAM200A (ENSPTRG00000042511) ZNF655 (ENSPTRG00000048790) TMEM225B (ENSPTRG00000043828) ZSCAN25 (ENSPTRG00000023744) ENSPTRG00000047408 CYP3A5 (ENSPTRG00000019458) Human MODERN SPECIES 19 TAC1 (ENSG00000006128) ASNS (ENSG00000070669) OCM2 (ENSG00000135175) LMTK2 (ENSG00000164715) BHLHA15 (ENSG00000180535) TECPR1 (ENSG00000205356) BRI3 (ENSG00000164713) BAIAP2L1 (ENSG00000006453) NPTX2 (ENSG00000106236) TMEM130 (ENSG00000166448) TRRAP (ENSG00000196367) SMURF1 (ENSG00000198742) KPNA7 (ENSG00000185467) ENSG00000284292 ARPC1A (ENSG00000241685) ##22 ARPC1B (ENSG00000130429) #22 PDAP1 (ENSG00000106244) #23 BUD31 (ENSG00000106245) #24 PTCD1 (ENSG00000106246) #25 ATP5MF-PTCD1 (ENSG00000248919) CPSF4 (ENSG00000160917) #26 ATP5MF (ENSG00000241468) #27 ZNF789 (ENSG00000198556) ZNF394 (ENSG00000160908) ZKSCAN5 (ENSG00000196652) FAM200A (ENSG00000221909) ZNF655 (ENSG00000197343) TMEM225B (ENSG00000244219) ZSCAN25 (ENSG00000197037) CYP3A5 (ENSG00000106258) CYP3A7-CYP3A51P (ENSG00000282301) Gorilla MODERN SPECIES 20 ENSGGOG00000038206 OCM2 (ENSGGOG00000022595) LMTK2 (ENSGGOG00000003052) TECPR1 (ENSGGOG00000003065) ENSGGOG00000009646 BAIAP2L1 (ENSGGOG00000022920) ENSGGOG00000023648 NPTX2 (ENSGGOG00000014713) TMEM130 (ENSGGOG00000016665) TRRAP (ENSGGOG00000002928) SMURF1 (ENSGGOG00000011481) KPNA7 (ENSGGOG00000000414) ENSGGOG00000016797 ENSGGOG00000036592 ##22 ARPC1A (ENSGGOG00000039217) ##22 ARPC1B (ENSGGOG00000013186) #22 PDAP1 (ENSGGOG00000025196) #23 BUD31 (ENSGGOG00000015119) #24 ENSGGOG00000041309 PTCD1 (ENSGGOG00000015123) #25 CPSF4 (ENSGGOG00000015131) #26 ATP5MF (ENSGGOG00000037236) #27 ENSGGOG00000022768 ZNF394 (ENSGGOG00000013650) ZKSCAN5 (ENSGGOG00000009555) FAM200A (ENSGGOG00000001350) ZNF655 (ENSGGOG00000002488) TMEM225B (ENSGGOG00000040673) ZSCAN25 (ENSGGOG00000016950) CYP3A5 (ENSGGOG00000003875) ENSGGOG00000043492 Orangutan MODERN SPECIES 20 ZNF853 (ENSPPYG00000040545) ZNF316 (ENSPPYG00000033506) ZNF12 (ENSPPYG00000030303) ENSPPYG00000017340 LMTK2 (ENSPPYG00000017360) BHLHA15 (ENSPPYG00000017361) TECPR1 (ENSPPYG00000017362) ENSPPYG00000037940 BAIAP2L1 (ENSPPYG00000017363) NPTX2 (ENSPPYG00000029795) TMEM130 (ENSPPYG00000017365) TRRAP (ENSPPYG00000017366) SMURF1 (ENSPPYG00000017368) KPNA7 (ENSPPYG00000017369) ARPC1A (ENSPPYG00000025816) ##22 ARPC1B (ENSPPYG00000017374) #22 ENSPPYG00000017375 #23 BUD31 (ENSPPYG00000017376) #24 PTCD1 (ENSPPYG00000017377) #25 CPSF4 (ENSPPYG00000017378) #26 ENSPPYG00000041797 ATP5MF (ENSPPYG00000017379) #27 ZNF789 (ENSPPYG00000041347) ZNF394 (ENSPPYG00000017381) ZKSCAN5 (ENSPPYG00000017382) FAM200A (ENSPPYG00000017383) ZNF655 (ENSPPYG00000017384) TMEM225B (ENSPPYG00000033654) ZSCAN25 (ENSPPYG00000034484) CYP3A5 (ENSPPYG00000034419) CYP3A7 (ENSPPYG00000032198)