> Amniota [ANCESTRALSPECIES]
>> CHROMOSOME 1
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Mammalia [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Theria [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Eutheria [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Boreoeutheria [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Euarchontoglires [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Euarchontoglires_A [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Glires [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Rodentia [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Rodentia_A [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Hystricomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 39
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Hystricomorpha_a [ANCESTRALSPECIES]
>> CHROMOSOME 30
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT01050000244950.a.a.b #17
DISTANT LINK BETWEEN ENSGT01050000244950.a.a.b #4 AND ENSGT00940000158416 #2
SYNTENIC BLOCK FROM ENSGT00940000158416 #18 TO ENSGT01050000244879.b.a.b.b #19
DISTANT LINK BETWEEN ENSGT01050000244879.b.a.b.b #7 AND ENSGT00940000160831 #5
SYNTENIC BLOCK FROM ENSGT00940000160831 #20 TO ENSGT00940000156535 #22
DISTANT LINK BETWEEN ENSGT00940000156535 #11 AND ENSGT00390000003223 #9
SYNTENIC BLOCK FROM ENSGT00390000003223 #23 TO ENSGT00940000158188 #30
> Hystricomorpha_b [ANCESTRALSPECIES]
>> CHROMOSOME 29
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT01050000244879.b.a.b.b #19 [REVERSED]
DISTANT LINK BETWEEN ENSGT01050000244879.b.a.b.b #197 AND ENSGT00940000160831 #199
SYNTENIC BLOCK FROM ENSGT00940000160831 #20 TO ENSGT00940000158188 #30 [REVERSED]
> Long-tailed chinchilla [REFERENCESPECIES]
>> CHROMOSOME 143
SYNTENIC BLOCK FROM ZUP1 (ENSCLAG00000007886) #15 TO MAN1A1 (ENSCLAG00000007613) #30
> Degu [MODERNSPECIES]
>> CHROMOSOME 75
SYNTENIC BLOCK FROM ZUP1 (ENSODEG00000004926) #15 TO RSPH4A (ENSODEG00000005270) #16
DISTANT LINK BETWEEN RSPH4A (ENSODEG00000005270) #3 AND RFX6 (ENSODEG00000006706) #1

DISTANT LINK BETWEEN RFX6 (ENSODEG00000006706) #5 AND ROS1 (ENSODEG00000006047) #3

DISTANT LINK BETWEEN ROS1 (ENSODEG00000006047) #7 AND GOPC (ENSODEG00000005332) #5
SYNTENIC BLOCK FROM GOPC (ENSODEG00000005332) #22 TO NUS1 (ENSODEG00000005194) #23
DISTANT LINK BETWEEN NUS1 (ENSODEG00000005194) #10 AND SLC35F1 (ENSODEG00000005040) #8
SYNTENIC BLOCK FROM SLC35F1 (ENSODEG00000005040) #24 TO MAN1A1 (ENSODEG00000004631) #30
> Guinea pig [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ZUP1 (ENSCPOG00000000534) #15 TO KPNA5 (ENSCPOG00000035973) #17
DISTANT LINK BETWEEN KPNA5 (ENSCPOG00000035973) #472 AND RFX6 (ENSCPOG00000015023) #470

DISTANT LINK BETWEEN RFX6 (ENSCPOG00000015023) #474 AND ENSCPOG00000012998 #472
SYNTENIC BLOCK FROM ENSCPOG00000012998 #20 TO GOPC (ENSCPOG00000010125) #22
DISTANT LINK BETWEEN GOPC (ENSCPOG00000010125) #479 AND NUS1 (ENSCPOG00000039822) #476
SYNTENIC BLOCK FROM NUS1 (ENSCPOG00000039822) #23 TO SLC35F1 (ENSCPOG00000029995) #24
DISTANT LINK BETWEEN SLC35F1 (ENSCPOG00000029995) #506 AND CEP85L (ENSCPOG00000005126) #480
SYNTENIC BLOCK FROM CEP85L (ENSCPOG00000005126) #25 TO PLN (ENSCPOG00000037471) #26
SYNTENIC BLOCK FROM MCM9 (ENSCPOG00000005443) #27 TO ASF1A (ENSCPOG00000033289) #28


> Naked mole-rat female [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSHGLG00000040407 #22 TO ENSHGLG00000003172 #24
DISTANT LINK BETWEEN ENSHGLG00000003172 #1105 AND CEP85L (ENSHGLG00000003335) #1103
SYNTENIC BLOCK FROM CEP85L (ENSHGLG00000003335) #25 TO MAN1A1 (ENSHGLG00000002233) #30
>> CHROMOSOME 30
SYNTENIC BLOCK FROM ENSHGLG00000009896 #15 TO ENSHGLG00000002525 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Sciuridae [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Eurasian red squirrel [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ZUP1 (ENSSVLG00005009321) #15 TO RSPH4A (ENSSVLG00005009389) #16








DISTANT LINK BETWEEN CEP85L (ENSSVLG00005007817) #265 AND PLN (ENSSVLG00005008023) #263

SYNTENIC BLOCK FROM MCM9 (ENSSVLG00005007606) #27 TO ASF1A (ENSSVLG00005007714) #28


> Marmotini [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Alpin marmot [MODERNSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ZUP1 (ENSMMMG00000015434) #15 TO RSPH4A (ENSMMMG00000015424) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Marmotini_b [ANCESTRALSPECIES]
>> CHROMOSOME 178
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Squirrel [MODERNSPECIES]
>> CHROMOSOME 258
SYNTENIC BLOCK FROM GPRC6A (ENSSTOG00000012356) #18 TO RFX6 (ENSSTOG00000012365) #19
DISTANT LINK BETWEEN RFX6 (ENSSTOG00000012365) #4 AND ROS1 (ENSSTOG00000006606) #2
SYNTENIC BLOCK FROM ROS1 (ENSSTOG00000006606) #20 TO GOPC (ENSSTOG00000006712) #22
DISTANT LINK BETWEEN GOPC (ENSSTOG00000006712) #8 AND NUS1 (ENSSTOG00000024807) #6
SYNTENIC BLOCK FROM NUS1 (ENSSTOG00000024807) #23 TO PLN (ENSSTOG00000033902) #26
ADJACENCY BETWEEN PLN (ENSSTOG00000033902) #26 AND ASF1A (ENSSTOG00000027796) #28
SYNTENIC BLOCK FROM ASF1A (ENSSTOG00000027796) #28 TO MAN1A1 (ENSSTOG00000027299) #30
>> CHROMOSOME 604
SYNTENIC BLOCK FROM ZUP1 (ENSSTOG00000012338) #15 TO RSPH4A (ENSSTOG00000033876) #16
> Arctic ground squirrel [MODERNSPECIES]
>> CHROMOSOME 133
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Rodentia_B [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 1622
SYNTENIC BLOCK FROM Zup1 (ENSNGAG00000020874) #15 TO Rsph4a (ENSNGAG00000022773) #16
>> CHROMOSOME 940
SYNTENIC BLOCK FROM Gprc6a (ENSNGAG00000002794) #18 TO Rfx6 (ENSNGAG00000011878) #19 [REVERSED]
DISTANT LINK BETWEEN Rfx6 (ENSNGAG00000011878) #14 AND Ros1 (ENSNGAG00000016624) #16
SYNTENIC BLOCK FROM Ros1 (ENSNGAG00000016624) #20 TO Gopc (ENSNGAG00000019735) #22 [REVERSED]
DISTANT LINK BETWEEN Gopc (ENSNGAG00000019735) #10 AND Nus1 (ENSNGAG00000021776) #12
SYNTENIC BLOCK FROM Nus1 (ENSNGAG00000021776) #23 TO Slc35f1 (ENSNGAG00000018835) #24 [REVERSED]
DISTANT LINK BETWEEN Slc35f1 (ENSNGAG00000018835) #7 AND Cep85l (ENSNGAG00000021057) #9
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN Pln (ENSNGAG00000021366) #6 AND Asf1a (ENSNGAG00000020470) #8
 [REVERSED]
DISTANT LINK BETWEEN Asf1a (ENSNGAG00000020470) #4 AND ENSNGAG00000019744 #6
SYNTENIC BLOCK FROM ENSNGAG00000019744 #29 TO Man1a (ENSNGAG00000011524) #30 [REVERSED]
> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 41
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Rat [MODERNSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM Zup1 (ENSRNOG00000000398) #15 TO Rsph4a (ENSRNOG00000049696) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16













> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM Zup1 (MGP_PahariEiJ_G0030642) #15 TO Rsph4a (MGP_PahariEiJ_G0030641) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16













> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM Zup1 (MGP_CAROLIEiJ_G0015225) #15 TO Rsph4a (MGP_CAROLIEiJ_G0015224) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16









SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> spretus [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM Zup1 (MGP_SPRETEiJ_G0016034) #15 TO Rsph4a (MGP_SPRETEiJ_G0016033) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 1833
SYNTENIC BLOCK FROM Zup1 (ENSMSIG00000001266) #15 TO Rsph4a (ENSMSIG00000001351) #16
>> CHROMOSOME 2221
SYNTENIC BLOCK FROM Gprc6a (ENSMSIG00000002274) #18 TO Rfx6 (ENSMSIG00000001975) #19 [REVERSED]
>> CHROMOSOME 3060
SYNTENIC BLOCK FROM Ros1 (ENSMSIG00000022755) #20 TO Dcbld1 (ENSMSIG00000022713) #21 [REVERSED]
DISTANT LINK BETWEEN Dcbld1 (ENSMSIG00000022713) #12 AND Gopc (ENSMSIG00000022667) #14
 [REVERSED]
DISTANT LINK BETWEEN Gopc (ENSMSIG00000022667) #10 AND Nus1 (ENSMSIG00000022636) #12
 [REVERSED]
DISTANT LINK BETWEEN Nus1 (ENSMSIG00000022636) #8 AND Slc35f1 (ENSMSIG00000022585) #10
 [REVERSED]
DISTANT LINK BETWEEN Slc35f1 (ENSMSIG00000022585) #5 AND Cep85l (ENSMSIG00000022480) #8
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN Pln (ENSMSIG00000022553) #2 AND Mcm9 (ENSMSIG00000022434) #6
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN Asf1a (ENSMSIG00000022467) #0 AND ENSMSIG00000022408 #3
 [REVERSED]
 [REVERSED]
> Mouse [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM Zup1 (ENSMUSG00000039531) #15 TO Rsph4a (ENSMUSG00000039552) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM Zup1 (ENSPEMG00000019963) #15 TO Rsph4a (ENSPEMG00000015392) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Prairie vole [MODERNSPECIES]
>> CHROMOSOME 358
SYNTENIC BLOCK FROM Zup1 (ENSMOCG00000007844) #15 TO Rsph4a (ENSMOCG00000015792) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Chinese hamster chok1gshd [MODERNSPECIES]
>> CHROMOSOME 160
SYNTENIC BLOCK FROM Zup1 (ENSCGRG00001019649) #15 TO Rsph4a (ENSCGRG00001022255) #16








SYNTENIC BLOCK FROM Cep85l (ENSCGRG00001013524) #25 TO Pln (ENSCGRG00001002992) #26
SYNTENIC BLOCK FROM Mcm9 (ENSCGRG00001011225) #27 TO Asf1a (ENSCGRG00001012443) #28


> Golden Hamster [MODERNSPECIES]
>> CHROMOSOME 655
SYNTENIC BLOCK FROM Zup1 (ENSMAUG00000012807) #15 TO Rsph4a (ENSMAUG00000009247) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 44







SYNTENIC BLOCK FROM Cep85l (ENSJJAG00000016233) #25 TO Pln (ENSJJAG00000003066) #26



> Kangaroo rat [MODERNSPECIES]
>> CHROMOSOME 476
SYNTENIC BLOCK FROM Zup1 (ENSDORG00000003947) #15 TO Rsph4a (ENSDORG00000003944) #16








SYNTENIC BLOCK FROM Cep85l (ENSDORG00000008984) #25 TO Pln (ENSDORG00000028705) #26



> Lagomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 108
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
ADJACENCY BETWEEN ENSGT00500000044869.a.a #16 AND ENSGT01050000244950.a.a.b #17
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Pika [MODERNSPECIES]
>> CHROMOSOME 248
SYNTENIC BLOCK FROM CEP85L (ENSOPRG00000004916) #25 TO MAN1A1 (ENSOPRG00000005018) #30
>> CHROMOSOME 244
SYNTENIC BLOCK FROM ENSOPRG00000007061 #15 TO ENSOPRG00000007052 #16 [REVERSED]
>> CHROMOSOME 834
SYNTENIC BLOCK FROM ROS1 (ENSOPRG00000015334) #20 TO ENSOPRG00000015459 #23
> Rabbit [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ZUP1 (ENSOCUG00000007805) #15 TO RSPH4A (ENSOCUG00000009852) #16 [REVERSED]
ADJACENCY BETWEEN RSPH4A (ENSOCUG00000009852) #16 AND KPNA5 (ENSOCUG00000007812) #17
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Tree shrew [MODERNSPECIES]
>> CHROMOSOME 4183
SYNTENIC BLOCK FROM ENSTBEG00000008816 #27 TO FAM184A (ENSTBEG00000000995) #29
>> CHROMOSOME 415
SYNTENIC BLOCK FROM ZUP1 (ENSTBEG00000010563) #15 TO RSPH4A (ENSTBEG00000010326) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 1335
SYNTENIC BLOCK FROM ROS1 (ENSTBEG00000016483) #20 TO ENSTBEG00000017546 #23
> Primates [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Haplorrhini [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Simiiformes [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Catarrhini [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Cercopithecidae [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Cercopithecinae [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Cercopithecinae_a [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Cercopithecinae_b [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Olive baboon [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ZUP1 (ENSPANG00000021725) #15 TO RSPH4A (ENSPANG00000006886) #16








SYNTENIC BLOCK FROM CEP85L (ENSPANG00000007396) #25 TO PLN (ENSPANG00000003332) #26
SYNTENIC BLOCK FROM MCM9 (ENSPANG00000012446) #27 TO ASF1A (ENSPANG00000009918) #28


> Cercopithecinae_d [ANCESTRALSPECIES]
>> CHROMOSOME 70
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Drill [MODERNSPECIES]
>> CHROMOSOME 114
SYNTENIC BLOCK FROM CEP85L (ENSMLEG00000004707) #25 TO FAM184A (ENSMLEG00000032764) #29
>> CHROMOSOME 1413
SYNTENIC BLOCK FROM ZUP1 (ENSMLEG00000033401) #15 TO RSPH4A (ENSMLEG00000000631) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Sooty mangabey [MODERNSPECIES]
>> CHROMOSOME 590
SYNTENIC BLOCK FROM ZUP1 (ENSCATG00000042362) #15 TO RSPH4A (ENSCATG00000031193) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Macaca [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Pig-tailed macaque [MODERNSPECIES]
>> CHROMOSOME 342
SYNTENIC BLOCK FROM ZUP1 (ENSMNEG00000031978) #15 TO RSPH4A (ENSMNEG00000038377) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Macaca_a [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Crab-eating macaque [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ZUP1 (ENSMFAG00000001086) #15 TO RSPH4A (ENSMFAG00000038872) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Rhesus [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ZUP1 (ENSMMUG00000001806) #15 TO RSPH4A (ENSMMUG00000001805) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Vervet Monkey [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ZUP1 (ENSCSAG00000015785) #15 TO RSPH4A (ENSCSAG00000015777) #16








SYNTENIC BLOCK FROM CEP85L (ENSCSAG00000016067) #25 TO PLN (ENSCSAG00000018971) #26
SYNTENIC BLOCK FROM MCM9 (ENSCSAG00000016078) #27 TO ASF1A (ENSCSAG00000016075) #28


> Rhinopithecus [ANCESTRALSPECIES]
>> CHROMOSOME 398
SYNTENIC BLOCK FROM ENSGT00940000160831 #20 TO ENSGT00390000015655.b #24
DISTANT LINK BETWEEN ENSGT00390000015655.b #8 AND ENSGT00620000087993.a.a #5
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26
DISTANT LINK BETWEEN ENSGT00390000002403 #11 AND ENSGT01090000260080.b.a #9


DISTANT LINK BETWEEN ENSGT00390000004692.d.b #12 AND ENSGT00530000063669.b #10

>> CHROMOSOME 472
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16



> Black snub-nosed monkey [MODERNSPECIES]
>> CHROMOSOME 2450
SYNTENIC BLOCK FROM ROS1 (ENSRBIG00000036577) #20 TO NUS1 (ENSRBIG00000041389) #23
>> CHROMOSOME 1771
SYNTENIC BLOCK FROM ZUP1 (ENSRBIG00000042607) #15 TO RSPH4A (ENSRBIG00000033414) #16



>> CHROMOSOME 1261
 [REVERSED]
DISTANT LINK BETWEEN SLC35F1 (ENSRBIG00000030516) #3 AND CEP85L (ENSRBIG00000040621) #6
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN PLN (ENSRBIG00000027648) #1 AND MCM9 (ENSRBIG00000027856) #4
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ASF1A (ENSRBIG00000030084) #0 AND FAM184A (ENSRBIG00000039649) #2
 [REVERSED]
> Golden snub-nosed monkey [MODERNSPECIES]
>> CHROMOSOME 2835
SYNTENIC BLOCK FROM ROS1 (ENSRROG00000036125) #20 TO SLC35F1 (ENSRROG00000014281) #24
DISTANT LINK BETWEEN SLC35F1 (ENSRROG00000014281) #7 AND CEP85L (ENSRROG00000038372) #5
SYNTENIC BLOCK FROM CEP85L (ENSRROG00000038372) #25 TO FAM184A (ENSRROG00000032830) #29
>> CHROMOSOME 1726
SYNTENIC BLOCK FROM ZUP1 (ENSRROG00000001608) #15 TO RSPH4A (ENSRROG00000034483) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Hominoidea [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Hominidae [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Orangutan [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ZUP1 (ENSPPYG00000016956) #15 TO RSPH4A (ENSPPYG00000016954) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Homo/Pan/Gorilla group [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Gorilla [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ZUP1 (ENSGGOG00000016798) #15 TO ENSGGOG00000016793 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Homo/Pan group [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Pan [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Chimpanzee [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ZUP1 (ENSPTRG00000018536) #15 TO RSPH4A (ENSPTRG00000018535) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Bonobo [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ZUP1 (ENSPPAG00000026765) #15 TO RSPH4A (ENSPPAG00000039243) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Human [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ZUP1 (ENSG00000153975) #15 TO RSPH4A (ENSG00000111834) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Gibbon [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ZUP1 (ENSNLEG00000013173) #15 TO RSPH4A (ENSNLEG00000013151) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSNLEG00000013543 #27 TO ASF1A (ENSNLEG00000013535) #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Platyrrhini [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16








SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Cebidae [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Marmoset [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ZUP1 (ENSCJAG00000004437) #15 TO RSPH4A (ENSCJAG00000004455) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Cebidae_a [ANCESTRALSPECIES]
>> CHROMOSOME 26
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Bolivian squirrel monkey [MODERNSPECIES]
>> CHROMOSOME 145
SYNTENIC BLOCK FROM ZUP1 (ENSSBOG00000023075) #15 TO RSPH4A (ENSSBOG00000027685) #16









DISTANT LINK BETWEEN CEP85L (ENSSBOG00000022276) #6 AND PLN (ENSSBOG00000036386) #4

SYNTENIC BLOCK FROM MCM9 (ENSSBOG00000024703) #27 TO ASF1A (ENSSBOG00000021054) #28


> Capuchin [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ZUP1 (ENSCCAG00000025061) #15 TO RSPH4A (ENSCCAG00000007275) #16







>> CHROMOSOME 130
 [REVERSED]
DISTANT LINK BETWEEN SLC35F1 (ENSCCAG00000027497) #17 AND CEP85L (ENSCCAG00000024000) #20
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN PLN (ENSCCAG00000002831) #15 AND MCM9 (ENSCCAG00000037854) #18
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ASF1A (ENSCCAG00000004456) #14 AND FAM184A (ENSCCAG00000025974) #16
SYNTENIC BLOCK FROM FAM184A (ENSCCAG00000025974) #29 TO MAN1A1 (ENSCCAG00000028717) #30 [REVERSED]
> Mas night monkey [MODERNSPECIES]
>> CHROMOSOME 1107
SYNTENIC BLOCK FROM ZUP1 (ENSANAG00000021756) #15 TO RSPH4A (ENSANAG00000020519) #16







>> CHROMOSOME 1108
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN PLN (ENSANAG00000031426) #16 AND MCM9 (ENSANAG00000030665) #19
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ASF1A (ENSANAG00000029437) #15 AND FAM184A (ENSANAG00000022084) #17
SYNTENIC BLOCK FROM FAM184A (ENSANAG00000022084) #29 TO MAN1A1 (ENSANAG00000023327) #30 [REVERSED]
> Tarsier [MODERNSPECIES]
>> CHROMOSOME 7225
SYNTENIC BLOCK FROM ENSTSYG00000004241 #22 TO NUS1 (ENSTSYG00000003212) #23 [REVERSED]
>> CHROMOSOME 6130
SYNTENIC BLOCK FROM ZUP1 (ENSTSYG00000000103) #15 TO RSPH4A (ENSTSYG00000000102) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 2032
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 936
SYNTENIC BLOCK FROM ENSTSYG00000010531 #20 TO ENSTSYG00000008938 #21 [REVERSED]
> Strepsirrhini [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Bushbaby [MODERNSPECIES]
>> CHROMOSOME 117
SYNTENIC BLOCK FROM ZUP1 (ENSOGAG00000011921) #15 TO RSPH4A (ENSOGAG00000011917) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Lemuriformes [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16









SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Mouse lemur [MODERNSPECIES]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM ZUP1 (ENSMICG00000013671) #15 TO RSPH4A (ENSMICG00000032048) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Lemuriformes_a [ANCESTRALSPECIES]
>> CHROMOSOME 63
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Coquerels sifaka [MODERNSPECIES]
>> CHROMOSOME 445
SYNTENIC BLOCK FROM ZUP1 (ENSPCOG00000021558) #15 TO RSPH4A (ENSPCOG00000006824) #16







>> CHROMOSOME 467
SYNTENIC BLOCK FROM SLC35F1 (ENSPCOG00000013473) #24 TO CEP85L (ENSPCOG00000018572) #25 [REVERSED]
DISTANT LINK BETWEEN CEP85L (ENSPCOG00000018572) #2 AND MCM9 (ENSPCOG00000016079) #4
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ASF1A (ENSPCOG00000025527) #1 AND FAM184A (ENSPCOG00000018183) #3
SYNTENIC BLOCK FROM FAM184A (ENSPCOG00000018183) #29 TO MAN1A1 (ENSPCOG00000019978) #30 [REVERSED]
> Greater bamboo lemur [MODERNSPECIES]
>> CHROMOSOME 117
SYNTENIC BLOCK FROM ZUP1 (ENSPSMG00000025258) #15 TO RSPH4A (ENSPSMG00000025239) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 29
 [REVERSED]
ADJACENCY BETWEEN ROS1 (ENSPSMG00000022466) #20 AND GOPC (ENSPSMG00000022383) #22
 [REVERSED]
DISTANT LINK BETWEEN GOPC (ENSPSMG00000022383) #8 AND NUS1 (ENSPSMG00000022340) #10
SYNTENIC BLOCK FROM NUS1 (ENSPSMG00000022340) #23 TO SLC35F1 (ENSPSMG00000022334) #24 [REVERSED]
DISTANT LINK BETWEEN SLC35F1 (ENSPSMG00000022334) #4 AND CEP85L (ENSPSMG00000022290) #7
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN PLN (ENSPSMG00000022297) #2 AND MCM9 (ENSPSMG00000022273) #5
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ASF1A (ENSPSMG00000022275) #1 AND FAM184A (ENSPSMG00000022208) #3
SYNTENIC BLOCK FROM FAM184A (ENSPSMG00000022208) #29 TO MAN1A1 (ENSPSMG00000022095) #30 [REVERSED]
> Laurasiatheria [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Eulipotyphla [ANCESTRALSPECIES]
>> CHROMOSOME 1932
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26
>> CHROMOSOME 777
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 2401


> Common shrew [MODERNSPECIES]
>> CHROMOSOME 916
SYNTENIC BLOCK FROM CEP85L (ENSSARG00000004302) #25 TO PLN (ENSSARG00000004374) #26
>> CHROMOSOME 3766
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 11013
 [REVERSED]
 [REVERSED]
> Hedgehog [MODERNSPECIES]
> Laurasiatheria_a [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Artiodactyla [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16








SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26




> Suina [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Pig [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ZUP1 (ENSSSCG00000004263) #15 TO RSPH4A (ENSSSCG00000023834) #16









DISTANT LINK BETWEEN CEP85L (ENSSSCG00000004249) #254 AND PLN (ENSSSCG00000062089) #252

SYNTENIC BLOCK FROM ENSSSCG00000004246 #27 TO ASF1A (ENSSSCG00000004247) #28


> Chacoan peccary [MODERNSPECIES]
>> CHROMOSOME 58
SYNTENIC BLOCK FROM ENSCWAG00000007849 #15 TO RSPH4A (ENSCWAG00000007907) #16








SYNTENIC BLOCK FROM CEP85L (ENSCWAG00000006572) #25 TO PLN (ENSCWAG00000006689) #26
SYNTENIC BLOCK FROM MCM9 (ENSCWAG00000006467) #27 TO ASF1A (ENSCWAG00000006542) #28


> Artiodactyla_a [ANCESTRALSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Camelidae [ANCESTRALSPECIES]
>> CHROMOSOME 26
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Arabian camel [MODERNSPECIES]
>> CHROMOSOME 34
SYNTENIC BLOCK FROM ZUP1 (ENSCDRG00005002876) #15 TO RSPH4A (ENSCDRG00005002922) #16








SYNTENIC BLOCK FROM CEP85L (ENSCDRG00005002324) #25 TO PLN (ENSCDRG00005002352) #26
SYNTENIC BLOCK FROM MCM9 (ENSCDRG00005002280) #27 TO ASF1A (ENSCDRG00005002302) #28


> Alpaca [MODERNSPECIES]
>> CHROMOSOME 2547
SYNTENIC BLOCK FROM ZUP1 (ENSVPAG00000002192) #15 TO RSPH4A (ENSVPAG00000002191) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 3579
SYNTENIC BLOCK FROM ASF1A (ENSVPAG00000005251) #28 TO FAM184A (ENSVPAG00000005252) #29
>> CHROMOSOME 1803
SYNTENIC BLOCK FROM SLC35F1 (ENSVPAG00000000401) #24 TO ENSVPAG00000000404 #27
> Artiodactyla_b [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Cetacea [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Odontoceti [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Odontoceti_a [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Dolphin [MODERNSPECIES]
>> CHROMOSOME 3437
SYNTENIC BLOCK FROM CEP85L (ENSTTRG00000013944) #25 TO ASF1A (ENSTTRG00000013969) #28
>> CHROMOSOME 3433
 [REVERSED]
DISTANT LINK BETWEEN ZUP1 (ENSTTRG00000010991) #0 AND RSPH4A (ENSTTRG00000010968) #2
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Odontoceti_b [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Vaquita [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ZUP1 (ENSPSNG00000014675) #15 TO RSPH4A (ENSPSNG00000014807) #16









SYNTENIC BLOCK FROM MCM9 (ENSPSNG00000011647) #27 TO ASF1A (ENSPSNG00000011854) #28


> Monodontidae [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Narwhal [MODERNSPECIES]
>> CHROMOSOME 301
SYNTENIC BLOCK FROM ZUP1 (ENSMMNG00015005586) #15 TO RSPH4A (ENSMMNG00015005528) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Beluga whale [MODERNSPECIES]
>> CHROMOSOME 80
SYNTENIC BLOCK FROM ZUFSP (ENSDLEG00000009259) #15 TO RSPH4A (ENSDLEG00000009231) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSDLEG00000010472 #27 TO ASF1A (ENSDLEG00000010458) #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Sperm whale [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ZUP1 (ENSPCTG00005013556) #15 TO RSPH4A (ENSPCTG00005013636) #16








SYNTENIC BLOCK FROM CEP85L (ENSPCTG00005011336) #25 TO PLN (ENSPCTG00005011549) #26
SYNTENIC BLOCK FROM MCM9 (ENSPCTG00005011269) #27 TO ASF1A (ENSPCTG00005011302) #28


> Blue whale [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ZUP1 (ENSBMSG00010012859) #15 TO RSPH4A (ENSBMSG00010012884) #16







SYNTENIC BLOCK FROM CEP85L (ENSBMSG00010012406) #25 TO PLN (ENSBMSG00010012457) #26
SYNTENIC BLOCK FROM MCM9 (ENSBMSG00010012352) #27 TO ENSBMSG00010012377 #28


> Pecora [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Yarkand deer [MODERNSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ZUP1 (ENSCHYG00000022708) #15 TO RSPH4A (ENSCHYG00000022831) #16







SYNTENIC BLOCK FROM CEP85L (ENSCHYG00000020415) #25 TO PLN (ENSCHYG00000020604) #26
SYNTENIC BLOCK FROM MCM9 (ENSCHYG00000019990) #27 TO ASF1A (ENSCHYG00000020334) #28


> Percora_a [ANCESTRALSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Siberian musk deer [MODERNSPECIES]
>> CHROMOSOME 55
SYNTENIC BLOCK FROM ZUP1 (ENSMMSG00000004239) #15 TO RSPH4A (ENSMMSG00000004275) #16







SYNTENIC BLOCK FROM CEP85L (ENSMMSG00000003761) #25 TO PLN (ENSMMSG00000003797) #26
SYNTENIC BLOCK FROM MCM9 (ENSMMSG00000003712) #27 TO ENSMMSG00000003736 #28


> Bovidae [ANCESTRALSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Bovinae [ANCESTRALSPECIES]
>> CHROMOSOME 31
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> American bison [MODERNSPECIES]
>> CHROMOSOME 3332
SYNTENIC BLOCK FROM ZUP1 (ENSBBBG00000009809) #15 TO RSPH4A (ENSBBBG00000009798) #16







SYNTENIC BLOCK FROM CEP85L (ENSBBBG00000010017) #25 TO PLN (ENSBBBG00000010007) #26
SYNTENIC BLOCK FROM MCM9 (ENSBBBG00000010053) #27 TO ASF1A (ENSBBBG00000010028) #28


> Bos [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16













> Bos_b [ANCESTRALSPECIES]
>> CHROMOSOME 24
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16







SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Hybrid Bos Indicus [MODERNSPECIES]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM ZUP1 (ENSBIXG00005010258) #15 TO RSPH4A (ENSBIXG00005010221) #16







SYNTENIC BLOCK FROM CEP85L (ENSBIXG00005010729) #25 TO PLN (ENSBIXG00005010671) #26
SYNTENIC BLOCK FROM MCM9 (ENSBIXG00005010820) #27 TO ASF1A (ENSBIXG00005000944) #28


> Cow [MODERNSPECIES]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM ZUP1 (ENSBTAG00000003878) #15 TO RSPH4A (ENSBTAG00000011890) #16







SYNTENIC BLOCK FROM CEP85L (ENSBTAG00000012929) #25 TO PLN (ENSBTAG00000012931) #26
SYNTENIC BLOCK FROM MCM9 (ENSBTAG00000002059) #27 TO ASF1A (ENSBTAG00000002058) #28


> Bos_a [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Wild yak [MODERNSPECIES]
>> CHROMOSOME 855
SYNTENIC BLOCK FROM ZUP1 (ENSBMUG00000021452) #15 TO RSPH4A (ENSBMUG00000021494) #16


>> CHROMOSOME 1153
 [REVERSED]
DISTANT LINK BETWEEN ROS1 (ENSBMUG00000010405) #3 AND DCBLD1 (ENSBMUG00000010253) #5
SYNTENIC BLOCK FROM DCBLD1 (ENSBMUG00000010253) #21 TO GOPC (ENSBMUG00000010173) #22 [REVERSED]
DISTANT LINK BETWEEN GOPC (ENSBMUG00000010173) #0 AND NUS1 (ENSBMUG00000010113) #2
 [REVERSED]
>> CHROMOSOME 2127
SYNTENIC BLOCK FROM CEP85L (ENSBMUG00000020125) #25 TO PLN (ENSBMUG00000020142) #26
>> CHROMOSOME 1309
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ASF1A (ENSBMUG00000023794) #2 AND FAM184A (ENSBMUG00000023772) #4
SYNTENIC BLOCK FROM FAM184A (ENSBMUG00000023772) #29 TO MAN1A1 (ENSBMUG00000023723) #30 [REVERSED]
> Domestic yak [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ZUP1 (ENSBGRG00000005961) #15 TO RSPH4A (ENSBGRG00000005878) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Caprinae [ANCESTRALSPECIES]
>> CHROMOSOME 33
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Goat [MODERNSPECIES]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM ZUP1 (ENSCHIG00000022998) #15 TO RSPH4A (ENSCHIG00000022737) #16







SYNTENIC BLOCK FROM CEP85L (ENSCHIG00000025357) #25 TO PLN (ENSCHIG00000011759) #26
SYNTENIC BLOCK FROM MCM9 (ENSCHIG00000018451) #27 TO ASF1A (ENSCHIG00000008452) #28


> Rambouillet Sheep [MODERNSPECIES]
>> CHROMOSOME 24








SYNTENIC BLOCK FROM CEP85L (ENSOARG00020022872) #25 TO PLN (ENSOARG00020023014) #26
SYNTENIC BLOCK FROM ENSOARG00020022754 #27 TO ASF1A (ENSOARG00020022814) #28


> Laurasiatheria_b [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Carnivora [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Caniformia [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Caniformia_b [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Mustelinae [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Ferret [MODERNSPECIES]
>> CHROMOSOME 166
SYNTENIC BLOCK FROM ZUP1 (ENSMPUG00000014237) #15 TO RSPH4A (ENSMPUG00000014235) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> American mink [MODERNSPECIES]
>> CHROMOSOME 242
SYNTENIC BLOCK FROM ZUP1 (ENSNVIG00000019669) #15 TO RSPH4A (ENSNVIG00000019709) #16








SYNTENIC BLOCK FROM CEP85L (ENSNVIG00000019270) #25 TO PLN (ENSNVIG00000019322) #26
SYNTENIC BLOCK FROM MCM9 (ENSNVIG00000019185) #27 TO ASF1A (ENSNVIG00000019225) #28


> Ursidae [ANCESTRALSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Giant Panda [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ZUP1 (ENSAMEG00000005752) #15 TO RSPH4A (ENSAMEG00000005736) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Ursus [ANCESTRALSPECIES]
>> CHROMOSOME 45
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Polar bear [MODERNSPECIES]
>> CHROMOSOME 172
SYNTENIC BLOCK FROM ZUP1 (ENSUMAG00000003755) #15 TO ENSUMAG00000003759 #16







SYNTENIC BLOCK FROM CEP85L (ENSUMAG00000002861) #25 TO PLN (ENSUMAG00000002894) #26
SYNTENIC BLOCK FROM MCM9 (ENSUMAG00000002850) #27 TO ASF1A (ENSUMAG00000002855) #28


> American black bear [MODERNSPECIES]
>> CHROMOSOME 915
SYNTENIC BLOCK FROM ZUP1 (ENSUAMG00000012655) #15 TO ENSUAMG00000012664 #16



>> CHROMOSOME 1006
 [REVERSED]
DISTANT LINK BETWEEN ASF1A (ENSUAMG00000006796) #1 AND FAM184A (ENSUAMG00000006768) #3
SYNTENIC BLOCK FROM FAM184A (ENSUAMG00000006768) #29 TO MAN1A1 (ENSUAMG00000006735) #30 [REVERSED]
> Canidae [ANCESTRALSPECIES]
>> CHROMOSOME 34
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Red fox [MODERNSPECIES]
>> CHROMOSOME 40
SYNTENIC BLOCK FROM ZUP1 (ENSVVUG00000016696) #15 TO RSPH4A (ENSVVUG00000016700) #16








SYNTENIC BLOCK FROM CEP85L (ENSVVUG00000015771) #25 TO PLN (ENSVVUG00000015847) #26
SYNTENIC BLOCK FROM MCM9 (ENSVVUG00000015719) #27 TO ASF1A (ENSVVUG00000015735) #28


> Canis_lupus [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Dog [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ZUP1 (ENSCAFG00845005699) #15 TO RSPH4A (ENSCAFG00845005676) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Dingo [MODERNSPECIES]
>> CHROMOSOME 125
SYNTENIC BLOCK FROM ZUP1 (ENSCAFG00020021322) #15 TO RSPH4A (ENSCAFG00020021320) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Felidae [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Panthera [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Tiger [MODERNSPECIES]
>> CHROMOSOME 120
SYNTENIC BLOCK FROM ZUP1 (ENSPTIG00000013533) #15 TO RSPH4A (ENSPTIG00000014297) #16








SYNTENIC BLOCK FROM CEP85L (ENSPTIG00000008858) #25 TO PLN (ENSPTIG00000006283) #26
SYNTENIC BLOCK FROM MCM9 (ENSPTIG00000007411) #27 TO ASF1A (ENSPTIG00000008424) #28


> Panthera_a [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> leopard [MODERNSPECIES]
>> CHROMOSOME 73
SYNTENIC BLOCK FROM ZUP1 (ENSPPRG00000004517) #15 TO RSPH4A (ENSPPRG00000004695) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> lion [MODERNSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ZUP1 (ENSPLOG00000003730) #15 TO RSPH4A (ENSPLOG00000003687) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Cat [MODERNSPECIES]
>> CHROMOSOME 236
SYNTENIC BLOCK FROM ZUP1 (ENSFCAG00000031494) #15 TO RSPH4A (ENSFCAG00000027641) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Laurasiatheria_c [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Chiroptera [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Microchiroptera [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16














> Microbat [MODERNSPECIES]
>> CHROMOSOME 994
SYNTENIC BLOCK FROM ZUP1 (ENSMLUG00000015906) #15 TO RSPH4A (ENSMLUG00000015892) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Greater horseshoe bat [MODERNSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM ZUP1 (ENSRFEG00010018008) #15 TO RSPH4A (ENSRFEG00010017838) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Megabat [MODERNSPECIES]
>> CHROMOSOME 4021
SYNTENIC BLOCK FROM CEP85L (ENSPVAG00000007396) #25 TO ASF1A (ENSPVAG00000007400) #28
>> CHROMOSOME 4023
SYNTENIC BLOCK FROM FAM184A (ENSPVAG00000015896) #29 TO MAN1A1 (ENSPVAG00000015901) #30
>> CHROMOSOME 3044

DISTANT LINK BETWEEN KPNA5 (ENSPVAG00000009903) #2 AND GPRC6A (ENSPVAG00000009906) #0

>> CHROMOSOME 2193
SYNTENIC BLOCK FROM ROS1 (ENSPVAG00000004298) #20 TO GOPC (ENSPVAG00000004308) #22
>> CHROMOSOME 8580
SYNTENIC BLOCK FROM ZUP1 (ENSPVAG00000004561) #15 TO ENSPVAG00000004555 #16 [REVERSED]
> Equus [ANCESTRALSPECIES]
>> CHROMOSOME 29
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16










SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28


> Horse [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ZUP1 (ENSECAG00000013523) #15 TO RSPH4A (ENSECAG00000012533) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Donkey [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ZUP1 (ENSEASG00005009054) #15 TO RSPH4A (ENSEASG00005009050) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Atlantogenata [ANCESTRALSPECIES]
>> CHROMOSOME 214
SYNTENIC BLOCK FROM ENSGT00390000015655.b #24 TO ENSGT00390000002403 #26
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Afrotheria [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Afrotheria_a [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
SYNTENIC BLOCK FROM ENSGT01090000260080.b.a #27 TO ENSGT00390000004692.d.b #28 [REVERSED]
 [REVERSED]
 [REVERSED]
> Elephant [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ZUP1 (ENSLAFG00000017345) #15 TO RSPH4A (ENSLAFG00000003514) #16








SYNTENIC BLOCK FROM ENSLAFG00000014839 #25 TO PLN (ENSLAFG00000014849) #26
SYNTENIC BLOCK FROM MCM9 (ENSLAFG00000013902) #27 TO ASF1A (ENSLAFG00000013912) #28


> Hyrax [MODERNSPECIES]
>> CHROMOSOME 1032
 [REVERSED]
DISTANT LINK BETWEEN ZUP1 (ENSPCAG00000004208) #0 AND RSPH4A (ENSPCAG00000004106) #2
 [REVERSED]
>> CHROMOSOME 4774
SYNTENIC BLOCK FROM DCBLD1 (ENSPCAG00000003803) #21 TO GOPC (ENSPCAG00000003890) #22
> Tenrec [MODERNSPECIES]
>> CHROMOSOME 7454
SYNTENIC BLOCK FROM ZUP1 (ENSETEG00000015958) #15 TO RSPH4A (ENSETEG00000015955) #16 [REVERSED]
 [REVERSED]
>> CHROMOSOME 1365
SYNTENIC BLOCK FROM ENSETEG00000003226 #27 TO ASF1A (ENSETEG00000003232) #28
>> CHROMOSOME 6343
SYNTENIC BLOCK FROM ROS1 (ENSETEG00000006028) #20 TO DCBLD1 (ENSETEG00000006037) #21
> Xenarthra [ANCESTRALSPECIES]
>> CHROMOSOME 168
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16







>> CHROMOSOME 1195
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000004692.d.b #1 AND ENSGT00530000063669.b #3
SYNTENIC BLOCK FROM ENSGT00530000063669.b #29 TO ENSGT00940000158188 #30 [REVERSED]
>> CHROMOSOME 1415
SYNTENIC BLOCK FROM ENSGT00390000015655.b #24 TO ENSGT00390000002403 #26
> Armadillo [MODERNSPECIES]
>> CHROMOSOME 2810
SYNTENIC BLOCK FROM ZUP1 (ENSDNOG00000044598) #15 TO RSPH4A (ENSDNOG00000001347) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 1486
SYNTENIC BLOCK FROM SLC35F1 (ENSDNOG00000045461) #24 TO PLN (ENSDNOG00000044223) #26
>> CHROMOSOME 744
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ASF1A (ENSDNOG00000047903) #3 AND FAM184A (ENSDNOG00000003739) #5
SYNTENIC BLOCK FROM FAM184A (ENSDNOG00000003739) #29 TO MAN1A1 (ENSDNOG00000002017) #30 [REVERSED]
> Sloth [MODERNSPECIES]
> Marsupialia [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16













> Marsupialia_b [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16













> Diprotodontia [ANCESTRALSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16













> Wallaby [MODERNSPECIES]
>> CHROMOSOME 7029
SYNTENIC BLOCK FROM DCBLD1 (ENSMEUG00000005730) #21 TO GOPC (ENSMEUG00000005745) #22
>> CHROMOSOME 2056
SYNTENIC BLOCK FROM CEP85L (ENSMEUG00000015957) #25 TO PLN (ENSMEUG00000015971) #26
> Diprotodontia_a [ANCESTRALSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM ENSGT00390000008232 #15 TO ENSGT00500000044869.a.a #16













> Common wonbat [MODERNSPECIES]
>> CHROMOSOME 426
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSVURG00010023013 #23 AND RSPH4A (ENSVURG00010023005) #25
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> koala [MODERNSPECIES]
>> CHROMOSOME 216
SYNTENIC BLOCK FROM ZUP1 (ENSPCIG00000023066) #15 TO RSPH4A (ENSPCIG00000023064) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Tasmanian devil [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ZUP1 (ENSSHAG00000017118) #15 TO RSPH4A (ENSSHAG00000007508) #16








SYNTENIC BLOCK FROM MCM9 (ENSSHAG00000007946) #27 TO ASF1A (ENSSHAG00000008878) #28


> Opossum [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ZUP1 (ENSMODG00000017831) #15 TO RSPH4A (ENSMODG00000017836) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Platypus [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ZUP1 (ENSOANG00000013491) #15 TO RSPH4A (ENSOANG00000012472) #16







SYNTENIC BLOCK FROM CEP85L (ENSOANG00000009500) #25 TO PLN (ENSOANG00000009499) #26
SYNTENIC BLOCK FROM MCM9 (ENSOANG00000008808) #27 TO ASF1A (ENSOANG00000040093) #28


> Sauria [ANCESTRALSPECIES]
>> CHROMOSOME 1









SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26



> Archelosauria [ANCESTRALSPECIES]
>> CHROMOSOME 1
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Cryptodira [ANCESTRALSPECIES]
>> CHROMOSOME 1









SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26



> Chinese turtle [MODERNSPECIES]
>> CHROMOSOME 1088


ADJACENCY BETWEEN ENSPSIG00000007710 #15 AND KPNA5 (ENSPSIG00000007891) #17

DISTANT LINK BETWEEN KPNA5 (ENSPSIG00000007891) #4 AND GPRC6A (ENSPSIG00000008333) #2
SYNTENIC BLOCK FROM GPRC6A (ENSPSIG00000008333) #18 TO RFX6 (ENSPSIG00000008368) #19
DISTANT LINK BETWEEN RFX6 (ENSPSIG00000008368) #7 AND ROS1 (ENSPSIG00000008974) #5
SYNTENIC BLOCK FROM ROS1 (ENSPSIG00000008974) #20 TO GOPC (ENSPSIG00000010909) #22
DISTANT LINK BETWEEN GOPC (ENSPSIG00000010909) #11 AND NUS1 (ENSPSIG00000011255) #9
SYNTENIC BLOCK FROM NUS1 (ENSPSIG00000011255) #23 TO PLN (ENSPSIG00000011775) #26
DISTANT LINK BETWEEN PLN (ENSPSIG00000011775) #16 AND ASF1A (ENSPSIG00000012763) #14
SYNTENIC BLOCK FROM ASF1A (ENSPSIG00000012763) #28 TO FAM184A (ENSPSIG00000013113) #29
DISTANT LINK BETWEEN FAM184A (ENSPSIG00000013113) #19 AND MAN1A1 (ENSPSIG00000014390) #17

> Testudinoidea [ANCESTRALSPECIES]
>> CHROMOSOME 32
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Emydidae [ANCESTRALSPECIES]
>> CHROMOSOME 46
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> painted turtle [MODERNSPECIES]
>> CHROMOSOME 814



>> CHROMOSOME 12
 [REVERSED]
DISTANT LINK BETWEEN RFX6 (ENSCPBG00000018850) #431 AND ROS1 (ENSCPBG00000018832) #433
SYNTENIC BLOCK FROM ROS1 (ENSCPBG00000018832) #20 TO GOPC (ENSCPBG00000018825) #22 [REVERSED]
DISTANT LINK BETWEEN GOPC (ENSCPBG00000018825) #427 AND NUS1 (ENSCPBG00000018822) #429
SYNTENIC BLOCK FROM NUS1 (ENSCPBG00000018822) #23 TO CEP85L (ENSCPBG00000018810) #25 [REVERSED]
ADJACENCY BETWEEN CEP85L (ENSCPBG00000018810) #25 AND ASF1A (ENSCPBG00000018809) #28
 [REVERSED]
DISTANT LINK BETWEEN ASF1A (ENSCPBG00000018809) #422 AND FAM184A (ENSCPBG00000018775) #424
SYNTENIC BLOCK FROM FAM184A (ENSCPBG00000018775) #29 TO MAN1A1 (ENSCPBG00000018765) #30 [REVERSED]
> Three-toed box turtle [MODERNSPECIES]
>> CHROMOSOME 31









SYNTENIC BLOCK FROM CEP85L (ENSTMTG00000000850) #25 TO PLN (ENSTMTG00000000877) #26



> Testudinidae [ANCESTRALSPECIES]
>> CHROMOSOME 10
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Goode s thornscrub tortoise [MODERNSPECIES]
>> CHROMOSOME 17
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Abingdon island giant tortoise [MODERNSPECIES]
>> CHROMOSOME 54
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 737
SYNTENIC BLOCK FROM CEP85L (ENSCABG00000009076) #25 TO PLN (ENSCABG00000009080) #26
DISTANT LINK BETWEEN PLN (ENSCABG00000009080) #3 AND ASF1A (ENSCABG00000009099) #1

>> CHROMOSOME 1397
SYNTENIC BLOCK FROM DCBLD1 (ENSCABG00000015664) #21 TO GOPC (ENSCABG00000015670) #22
> Archosauria [ANCESTRALSPECIES]
>> CHROMOSOME 3









SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26



> Australian saltwater crocodile [MODERNSPECIES]
>> CHROMOSOME 38
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Aves [ANCESTRALSPECIES]
>> CHROMOSOME 10









SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26



> African ostrich [MODERNSPECIES]
>> CHROMOSOME 837









SYNTENIC BLOCK FROM CEP85L (ENSSCUG00000017358) #25 TO PLN (ENSSCUG00000017359) #26


> Neognathae [ANCESTRALSPECIES]
>> CHROMOSOME 2









SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26



> Galloanserae [ANCESTRALSPECIES]
>> CHROMOSOME 2
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Phasianidae [ANCESTRALSPECIES]
>> CHROMOSOME 3
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Phasianidae_b [ANCESTRALSPECIES]
>> CHROMOSOME 2









SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26



> Chicken [MODERNSPECIES]
>> CHROMOSOME 22









SYNTENIC BLOCK FROM CEP85L (ENSGALG00010015123) #25 TO PLN (ENSGALG00010015134) #26



> Turkey [MODERNSPECIES]
>> CHROMOSOME 11

ADJACENCY BETWEEN ENSMGAG00000013374 #15 AND ENSMGAG00000013370 #17

DISTANT LINK BETWEEN ENSMGAG00000013370 #734 AND ENSMGAG00000015882 #732
SYNTENIC BLOCK FROM ENSMGAG00000015882 #18 TO ENSMGAG00000013368 #19
DISTANT LINK BETWEEN ENSMGAG00000013368 #739 AND ENSMGAG00000013352 #735


DISTANT LINK BETWEEN ENSMGAG00000013351 #741 AND NUS1 (ENSMGAG00000013346) #738
SYNTENIC BLOCK FROM NUS1 (ENSMGAG00000013346) #23 TO PLN (ENSMGAG00000017858) #26
DISTANT LINK BETWEEN PLN (ENSMGAG00000017858) #746 AND ENSMGAG00000013338 #744
SYNTENIC BLOCK FROM ENSMGAG00000013338 #28 TO ENSMGAG00000013328 #30
> Japanese quail [MODERNSPECIES]
>> CHROMOSOME 21













> Anatidae [ANCESTRALSPECIES]
>> CHROMOSOME 0









SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26




> Duck [MODERNSPECIES]
>> CHROMOSOME 21










SYNTENIC BLOCK FROM CEP85L (ENSAPLG00000015522) #25 TO PLN (ENSAPLG00000002357) #26




> Pink-footed goose [MODERNSPECIES]
>> CHROMOSOME 146
SYNTENIC BLOCK FROM SLC35F1 (ENSABRG00000000062) #24 TO PLN (ENSABRG00000000072) #26
DISTANT LINK BETWEEN PLN (ENSABRG00000000072) #4 AND ASF1A (ENSABRG00000000086) #2
SYNTENIC BLOCK FROM ASF1A (ENSABRG00000000086) #28 TO MAN1A1 (ENSABRG00000000136) #30
>> CHROMOSOME 330









> Neognathae_b [ANCESTRALSPECIES]
>> CHROMOSOME 1









SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26



> Neognathae_c [ANCESTRALSPECIES]
>> CHROMOSOME 5
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Golden eagle [MODERNSPECIES]
>> CHROMOSOME 11
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSACCG00020006739 #628 AND DCBLD1 (ENSACCG00020005910) #674
SYNTENIC BLOCK FROM DCBLD1 (ENSACCG00020005910) #21 TO GOPC (ENSACCG00020005891) #22 [REVERSED]
DISTANT LINK BETWEEN GOPC (ENSACCG00020005891) #625 AND NUS1 (ENSACCG00020006287) #627
SYNTENIC BLOCK FROM NUS1 (ENSACCG00020006287) #23 TO CEP85L (ENSACCG00020006260) #25 [REVERSED]
ADJACENCY BETWEEN CEP85L (ENSACCG00020006260) #25 AND ASF1A (ENSACCG00020006250) #28
 [REVERSED]
DISTANT LINK BETWEEN ASF1A (ENSACCG00020006250) #620 AND FAM184A (ENSACCG00020006215) #622
SYNTENIC BLOCK FROM FAM184A (ENSACCG00020006215) #29 TO MAN1A1 (ENSACCG00020006094) #30 [REVERSED]
> Kakapo [MODERNSPECIES]
>> CHROMOSOME 23









SYNTENIC BLOCK FROM CEP85L (ENSSHBG00005002612) #25 TO PLN (ENSSHBG00005002660) #26



> Passeriformes [ANCESTRALSPECIES]
>> CHROMOSOME 2









SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26



> Great tit [MODERNSPECIES]
>> CHROMOSOME 22









SYNTENIC BLOCK FROM CEP85L (ENSPMJG00000013996) #25 TO PLN (ENSPMJG00000014007) #26



> Passeriformes_d [ANCESTRALSPECIES]
>> CHROMOSOME 2









SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26



> Flycatcher [MODERNSPECIES]
>> CHROMOSOME 21









SYNTENIC BLOCK FROM CEP85L (ENSFALG00000011168) #25 TO PLN (ENSFALG00000015284) #26



> Passeriformes_g [ANCESTRALSPECIES]
>> CHROMOSOME 1














> Medium ground finch [MODERNSPECIES]
>> CHROMOSOME 9
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Passeroidea [ANCESTRALSPECIES]
>> CHROMOSOME 0














> Common canary [MODERNSPECIES]
>> CHROMOSOME 1













> Zebra finch [MODERNSPECIES]
>> CHROMOSOME 23
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Lepidosauria [ANCESTRALSPECIES]
>> CHROMOSOME 0













> Episquamata [ANCESTRALSPECIES]
>> CHROMOSOME 0
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Toxicofera [ANCESTRALSPECIES]
>> CHROMOSOME 0
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Elapidae [ANCESTRALSPECIES]
>> CHROMOSOME 0













> Indian cobra [MODERNSPECIES]
>> CHROMOSOME 0








SYNTENIC BLOCK FROM CEP85L (ENSNNAG00000005278) #25 TO PLN (ENSNNAG00000005326) #26



> Elapidae_a [ANCESTRALSPECIES]
>> CHROMOSOME 34
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Blue-lipped sea krait [MODERNSPECIES]
>> CHROMOSOME 8408
SYNTENIC BLOCK FROM ASF1A (ENSLLTG00000010838) #28 TO ENSLLTG00000010864 #29
> Acanthophiinae [ANCESTRALSPECIES]
>> CHROMOSOME 34













> Mainland tiger snake [MODERNSPECIES]
>> CHROMOSOME 14
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Eastern brown snake [MODERNSPECIES]
>> CHROMOSOME 28
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Lizard [MODERNSPECIES]
>> CHROMOSOME 0








SYNTENIC BLOCK FROM CEP85L (ENSACAG00000017676) #25 TO PLN (ENSACAG00000017688) #26



> Laterata [ANCESTRALSPECIES]
>> CHROMOSOME 4
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00620000087993.a.a #25 TO ENSGT00390000002403 #26 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Common wall lizard [MODERNSPECIES]
>> CHROMOSOME 16
 [REVERSED]
DISTANT LINK BETWEEN ENSPMRG00000014148 #541 AND ENSPMRG00000008846 #1364
 [REVERSED]
>> CHROMOSOME 11
 [REVERSED]
DISTANT LINK BETWEEN ENSPMRG00000003980 #563 AND ENSPMRG00000006182 #951

DISTANT LINK BETWEEN ENSPMRG00000006182 #565 AND GPRC6A (ENSPMRG00000006219) #563
SYNTENIC BLOCK FROM GPRC6A (ENSPMRG00000006219) #18 TO RFX6 (ENSPMRG00000006227) #19
ADJACENCY BETWEEN RFX6 (ENSPMRG00000006227) #19 AND DCBLD1 (ENSPMRG00000006247) #21

DISTANT LINK BETWEEN DCBLD1 (ENSPMRG00000006247) #569 AND GOPC (ENSPMRG00000006277) #567

DISTANT LINK BETWEEN GOPC (ENSPMRG00000006277) #571 AND SLC35F1 (ENSPMRG00000006298) #569
SYNTENIC BLOCK FROM SLC35F1 (ENSPMRG00000006298) #24 TO PLN (ENSPMRG00000006326) #26
DISTANT LINK BETWEEN PLN (ENSPMRG00000006326) #575 AND ASF1A (ENSPMRG00000006339) #573
SYNTENIC BLOCK FROM ASF1A (ENSPMRG00000006339) #28 TO MAN1A1 (ENSPMRG00000006395) #30
> Argentine black and white tegu [MODERNSPECIES]
>> CHROMOSOME 2








SYNTENIC BLOCK FROM CEP85L (ENSSMRG00000012355) #25 TO PLN (ENSSMRG00000012356) #26



> tuatara [MODERNSPECIES]
>> CHROMOSOME 571

DISTANT LINK BETWEEN RFX6 (ENSSPUG00000009255) #3 AND DCBLD1 (ENSSPUG00000009483) #0
SYNTENIC BLOCK FROM DCBLD1 (ENSSPUG00000009483) #21 TO GOPC (ENSSPUG00000009534) #22
DISTANT LINK BETWEEN GOPC (ENSSPUG00000009534) #6 AND NUS1 (ENSSPUG00000009582) #4
SYNTENIC BLOCK FROM NUS1 (ENSSPUG00000009582) #23 TO PLN (ENSSPUG00000009856) #26
DISTANT LINK BETWEEN PLN (ENSSPUG00000009856) #11 AND ASF1A (ENSSPUG00000009891) #9
SYNTENIC BLOCK FROM ASF1A (ENSSPUG00000009891) #28 TO MAN1A1 (ENSSPUG00000010093) #30
>> CHROMOSOME 1010