> Euarchontoglires_A [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000160798 #5
DISTANT LINK BETWEEN ENSGT00940000160798 #738 AND ENSGT00940000155565 #736
SYNTENIC BLOCK FROM ENSGT00940000155565 #6 TO ENSGT00940000158338 #7
DISTANT LINK BETWEEN ENSGT00940000158338 #741 AND ENSGT00940000155739 #739
SYNTENIC BLOCK FROM ENSGT00940000155739 #8 TO ENSGT00940000161215 #19
DISTANT LINK BETWEEN ENSGT00940000161215 #754 AND ENSGT00940000162096 #752
SYNTENIC BLOCK FROM ENSGT00940000162096 #20 TO ENSGT00390000015960.a.b.b #30
> Glires [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000160798 #5
DISTANT LINK BETWEEN ENSGT00940000160798 #736 AND ENSGT00940000155565 #734
SYNTENIC BLOCK FROM ENSGT00940000155565 #6 TO ENSGT00940000158338 #7
DISTANT LINK BETWEEN ENSGT00940000158338 #739 AND ENSGT00940000155739 #737
SYNTENIC BLOCK FROM ENSGT00940000155739 #8 TO ENSGT00940000161215 #19
DISTANT LINK BETWEEN ENSGT00940000161215 #752 AND ENSGT00940000162096 #750

DISTANT LINK BETWEEN ENSGT00940000162096 #754 AND ENSGT00940000157775 #752
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30
> Rodentia [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000158338 #7
DISTANT LINK BETWEEN ENSGT00940000158338 #734 AND ENSGT00940000155739 #732
SYNTENIC BLOCK FROM ENSGT00940000155739 #8 TO ENSGT00940000161215 #19
DISTANT LINK BETWEEN ENSGT00940000161215 #748 AND ENSGT00940000162096 #745

DISTANT LINK BETWEEN ENSGT00940000162096 #750 AND ENSGT00940000157775 #748
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30
> Rodentia_A [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000158338 #7
DISTANT LINK BETWEEN ENSGT00940000158338 #722 AND ENSGT00940000155739 #720
SYNTENIC BLOCK FROM ENSGT00940000155739 #8 TO ENSGT00940000161215 #19
DISTANT LINK BETWEEN ENSGT00940000161215 #736 AND ENSGT00940000162096 #733

DISTANT LINK BETWEEN ENSGT00940000162096 #738 AND ENSGT00940000157775 #736
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30
> Sciuridae [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000161215 #19
DISTANT LINK BETWEEN ENSGT00940000161215 #732 AND ENSGT00940000162096 #730
SYNTENIC BLOCK FROM ENSGT00940000162096 #20 TO ENSGT00390000015960.a.b.b #30
> Marmotini [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000161215 #19
DISTANT LINK BETWEEN ENSGT00940000161215 #327 AND ENSGT00940000162096 #325
SYNTENIC BLOCK FROM ENSGT00940000162096 #20 TO ENSGT00390000015960.a.b.b #30
> Alpin marmot [REFERENCESPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM AGPAT1 (ENSMMMG00000017992) #0 TO LY6G6D (ENSMMMG00000010160) #30 [REVERSED]
> Marmotini_b [ANCESTRALSPECIES]
>> CHROMOSOME 82
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000161215 #19
DISTANT LINK BETWEEN ENSGT00940000161215 #34 AND ENSGT00940000162096 #32
SYNTENIC BLOCK FROM ENSGT00940000162096 #20 TO ENSGT00390000015960.a.b.b #30
> Squirrel [MODERNSPECIES]
>> CHROMOSOME 327
SYNTENIC BLOCK FROM AGPAT1 (ENSSTOG00000008401) #0 TO ENSSTOG00000029617 #19
SYNTENIC BLOCK FROM ENSSTOG00000033750 #19 TO HSPA1L (ENSSTOG00000029893) #20
DISTANT LINK BETWEEN HSPA1L (ENSSTOG00000029893) #38 AND VARS1 (ENSSTOG00000013112) #36
SYNTENIC BLOCK FROM VARS1 (ENSSTOG00000013112) #22 TO LY6G6D (ENSSTOG00000031597) #30
> Arctic ground squirrel [MODERNSPECIES]
>> CHROMOSOME 662
SYNTENIC BLOCK FROM AGPAT1 (ENSUPAG00010019676) #0 TO ENSUPAG00010019727 #6
SYNTENIC BLOCK FROM ENSUPAG00010019731 #6 TO EHMT2 (ENSUPAG00010020118) #16
ADJACENCY BETWEEN EHMT2 (ENSUPAG00010020118) #16 AND NEU1 (ENSUPAG00010020203) #18
SYNTENIC BLOCK FROM NEU1 (ENSUPAG00010020203) #18 TO ENSUPAG00010020208 #19
DISTANT LINK BETWEEN ENSUPAG00010020208 #26 AND HSPA1L (ENSUPAG00010020211) #24
SYNTENIC BLOCK FROM HSPA1L (ENSUPAG00010020211) #20 TO LY6G6D (ENSUPAG00010020352) #30
> Eurasian red squirrel [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM AGPAT1 (ENSSVLG00005009434) #0 TO ENSSVLG00005009478 #1
ADJACENCY BETWEEN ENSSVLG00005009478 #1 AND PRRT1 (ENSSVLG00005009624) #3
SYNTENIC BLOCK FROM PRRT1 (ENSSVLG00005009624) #3 TO ENSSVLG00005009930 #6
SYNTENIC BLOCK FROM ENSSVLG00005010039 #6 TO NELFE (ENSSVLG00005013975) #12
ADJACENCY BETWEEN NELFE (ENSSVLG00005013975) #12 AND ZBTB12 (ENSSVLG00005015684) #15
SYNTENIC BLOCK FROM ZBTB12 (ENSSVLG00005015684) #15 TO LY6G6D (ENSSVLG00005018868) #30
> Hystricomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000158338 #7 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158338 #88 AND ENSGT00940000155739 #90
SYNTENIC BLOCK FROM ENSGT00940000155739 #8 TO ENSGT00950000182944.D #18 [REVERSED]
DISTANT LINK BETWEEN ENSGT00950000182944.D #75 AND ENSGT00940000161215.t #78
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000161215.s #74 AND ENSGT00940000162096 #77
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000162096 #72 AND ENSGT00940000157775 #74
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30 [REVERSED]
> Hystricomorpha_a [ANCESTRALSPECIES]
>> CHROMOSOME 42
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000158338 #7
DISTANT LINK BETWEEN ENSGT00940000158338 #94 AND ENSGT00940000155739 #92
SYNTENIC BLOCK FROM ENSGT00940000155739 #8 TO ENSGT00940000162096 #20
DISTANT LINK BETWEEN ENSGT00940000162096 #108 AND ENSGT00940000157775 #106
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30
> Guinea pig [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM AGPAT1 (ENSCPOG00000037644) #0 TO ENSCPOG00000002716 #7 [REVERSED]
DISTANT LINK BETWEEN ENSCPOG00000002716 #373 AND ENSCPOG00000031422 #371
SYNTENIC BLOCK FROM ENSCPOG00000031422 #8 TO C2 (ENSCPOG00000021284) #14 [REVERSED]
ADJACENCY BETWEEN C2 (ENSCPOG00000021284) #14 AND EHMT2 (ENSCPOG00000014788) #16
SYNTENIC BLOCK FROM EHMT2 (ENSCPOG00000014788) #16 TO ENSCPOG00000000974 #19 [REVERSED]
SYNTENIC BLOCK FROM ENSCPOG00000035597 #19 TO HSPA1L (ENSCPOG00000035528) #20 [REVERSED]
DISTANT LINK BETWEEN HSPA1L (ENSCPOG00000035528) #387 AND VARS1 (ENSCPOG00000000870) #385
SYNTENIC BLOCK FROM VARS1 (ENSCPOG00000000870) #22 TO LY6G6D (ENSCPOG00000040085) #30 [REVERSED]
> Hystricomorpha_b [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000160798 #5
DISTANT LINK BETWEEN ENSGT00940000160798 #297 AND ENSGT00940000155565 #295


DISTANT LINK BETWEEN ENSGT00940000158338 #299 AND ENSGT00940000155739 #296
SYNTENIC BLOCK FROM ENSGT00940000155739 #8 TO ENSGT00940000162096 #20
DISTANT LINK BETWEEN ENSGT00940000162096 #313 AND ENSGT00940000157775 #311
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30
> Degu [MODERNSPECIES]
>> CHROMOSOME 46
SYNTENIC BLOCK FROM AGPAT1 (ENSODEG00000017444) #0 TO ENSODEG00000017443 #3
ADJACENCY BETWEEN ENSODEG00000017443 #3 AND ATF6B (ENSODEG00000017478) #5

DISTANT LINK BETWEEN ATF6B (ENSODEG00000017478) #310 AND ENSODEG00000017498 #308

DISTANT LINK BETWEEN ENSODEG00000017498 #312 AND STK19 (ENSODEG00000017509) #310
SYNTENIC BLOCK FROM STK19 (ENSODEG00000017509) #9 TO ENSODEG00000020560 #19
SYNTENIC BLOCK FROM ENSODEG00000020564 #19 TO HSPA1L (ENSODEG00000020501) #20
DISTANT LINK BETWEEN HSPA1L (ENSODEG00000020501) #326 AND VARS1 (ENSODEG00000017681) #324
SYNTENIC BLOCK FROM VARS1 (ENSODEG00000017681) #22 TO LY6G6D (ENSODEG00000017755) #30
> Long-tailed chinchilla [MODERNSPECIES]
>> CHROMOSOME 144
SYNTENIC BLOCK FROM ENSCLAG00000008617 #0 TO ATF6B (ENSCLAG00000007441) #5 [REVERSED]
DISTANT LINK BETWEEN ATF6B (ENSCLAG00000007441) #41 AND ENSCLAG00000008330 #43
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN CYP21A2 (ENSCLAG00000007939) #39 AND ENSCLAG00000008416 #42
SYNTENIC BLOCK FROM ENSCLAG00000008416 #8 TO HSPA1L (ENSCLAG00000007254) #20 [REVERSED]
DISTANT LINK BETWEEN HSPA1L (ENSCLAG00000007254) #25 AND VARS1 (ENSCLAG00000009470) #27
SYNTENIC BLOCK FROM VARS1 (ENSCLAG00000009470) #22 TO CLIC1 (ENSCLAG00000008227) #26 [REVERSED]
DISTANT LINK BETWEEN CLIC1 (ENSCLAG00000008227) #19 AND DDAH2 (ENSCLAG00000006559) #21
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN MPIG6B (ENSCLAG00000007245) #18 AND LY6G6C (ENSCLAG00000009864) #20
SYNTENIC BLOCK FROM LY6G6C (ENSCLAG00000009864) #29 TO ENSCLAG00000009432 #30 [REVERSED]
> Naked mole-rat female [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM AGPAT1 (ENSHGLG00000013956) #0 TO ATF6B (ENSHGLG00000016687) #5
DISTANT LINK BETWEEN ATF6B (ENSHGLG00000016687) #506 AND ENSHGLG00000016544 #508


DISTANT LINK BETWEEN ENSHGLG00000016534 #505 AND STK19 (ENSHGLG00000016553) #507
SYNTENIC BLOCK FROM STK19 (ENSHGLG00000016553) #9 TO NELFE (ENSHGLG00000016601) #12
ADJACENCY BETWEEN NELFE (ENSHGLG00000016601) #12 AND ENSHGLG00000042406 #14

ADJACENCY BETWEEN ENSHGLG00000042406 #14 AND EHMT2 (ENSHGLG00000019509) #16
SYNTENIC BLOCK FROM EHMT2 (ENSHGLG00000019509) #16 TO NEU1 (ENSHGLG00000046499) #18
DISTANT LINK BETWEEN NEU1 (ENSHGLG00000046499) #496 AND ENSHGLG00000018564 #498
SYNTENIC BLOCK FROM ENSHGLG00000018564 #19 TO HSPA1L (ENSHGLG00000034751) #20
DISTANT LINK BETWEEN HSPA1L (ENSHGLG00000034751) #493 AND VWA7 (ENSHGLG00000012234) #495
SYNTENIC BLOCK FROM VWA7 (ENSHGLG00000012234) #23 TO DDAH2 (ENSHGLG00000039122) #27
DISTANT LINK BETWEEN DDAH2 (ENSHGLG00000039122) #487 AND ENSHGLG00000019251 #489
SYNTENIC BLOCK FROM ENSHGLG00000019251 #29 TO ENSHGLG00000040317 #30
> Rodentia_B [ANCESTRALSPECIES]
>> CHROMOSOME 71
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000155565 #2 AND ENSGT00940000158338 #0
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000160798 #5 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000160798 #5 AND ENSGT00390000018295 #9
SYNTENIC BLOCK FROM ENSGT00390000018295 #9 TO ENSGT00940000161215 #19 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000161215 #267 AND ENSGT00940000162096 #269
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000162096 #265 AND ENSGT00940000157775 #267
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30 [REVERSED]
> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 91
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000155565 #2 AND ENSGT00940000158338 #0
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000160798 #5 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000160798 #5 AND ENSGT00390000018295 #9
SYNTENIC BLOCK FROM ENSGT00390000018295 #9 TO ENSGT00940000161215 #19 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000161215 #265 AND ENSGT00940000162096 #267
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000162096 #263 AND ENSGT00940000157775 #265
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30 [REVERSED]
> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 110
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000155565 #2 AND ENSGT00940000158338 #0
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000160798 #5 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000160798 #5 AND ENSGT00390000018295 #9
SYNTENIC BLOCK FROM ENSGT00390000018295 #9 TO ENSGT00940000161215 #19 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000161215 #267 AND ENSGT00940000162096 #269
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000162096 #265 AND ENSGT00940000157775 #267
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30 [REVERSED]
> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 1767
SYNTENIC BLOCK FROM Agpat1 (ENSNGAG00000013919) #0 TO ENSNGAG00000023473 #5
DISTANT LINK BETWEEN ENSNGAG00000023473 #14 AND Tnxb (ENSNGAG00000000974) #12
SYNTENIC BLOCK FROM Tnxb (ENSNGAG00000000974) #6 TO Cfb (ENSNGAG00000009653) #13
ADJACENCY BETWEEN Cfb (ENSNGAG00000009653) #13 AND Zbtb12 (ENSNGAG00000011842) #15
SYNTENIC BLOCK FROM Zbtb12 (ENSNGAG00000011842) #15 TO Neu1 (ENSNGAG00000016139) #18
ADJACENCY BETWEEN Neu1 (ENSNGAG00000016139) #18 AND Hspa1l (ENSNGAG00000000836) #20

DISTANT LINK BETWEEN Hspa1l (ENSNGAG00000000836) #28 AND Vars (ENSNGAG00000012151) #26
SYNTENIC BLOCK FROM Vars (ENSNGAG00000012151) #22 TO Ly6g6d (ENSNGAG00000022523) #30
> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000160798 #5
ADJACENCY BETWEEN ENSGT00940000160798 #5 AND ENSGT00390000018295 #9
SYNTENIC BLOCK FROM ENSGT00390000018295 #9 TO ENSGT00940000161215 #19
DISTANT LINK BETWEEN ENSGT00940000161215 #579 AND ENSGT00940000162096 #577

DISTANT LINK BETWEEN ENSGT00940000162096 #581 AND ENSGT00940000157775 #579
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30
>> CHROMOSOME 57
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000155565 #2 AND ENSGT00940000158338 #0
 [REVERSED]
 [REVERSED]
> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000160798 #5 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000160798 #5 AND ENSGT00390000018295 #9
SYNTENIC BLOCK FROM ENSGT00390000018295 #9 TO ENSGT00940000161215 #19 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000161215 #109 AND ENSGT00940000162096 #111
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000162096 #107 AND ENSGT00940000157775 #109
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30 [REVERSED]
>> CHROMOSOME 62
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000155565 #2 AND ENSGT00940000158338 #0
 [REVERSED]
 [REVERSED]
> Rat [MODERNSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM Agpat1 (ENSRNOG00000000437) #0 TO C4a (ENSRNOG00000066573) #8

DISTANT LINK BETWEEN C4b (ENSRNOG00000070397) #176 AND Stk19 (ENSRNOG00000048929) #191
SYNTENIC BLOCK FROM Stk19 (ENSRNOG00000048929) #9 TO Nelfe (ENSRNOG00000000420) #12
ADJACENCY BETWEEN Nelfe (ENSRNOG00000000420) #12 AND Cfb (ENSRNOG00000051235) #14

ADJACENCY BETWEEN Cfb (ENSRNOG00000051235) #14 AND Ehmt2 (ENSRNOG00000030630) #16
SYNTENIC BLOCK FROM Ehmt2 (ENSRNOG00000030630) #16 TO Neu1 (ENSRNOG00000032942) #18
DISTANT LINK BETWEEN Neu1 (ENSRNOG00000032942) #167 AND Hspa1b (ENSRNOG00000050647) #169

DISTANT LINK BETWEEN Hspa1b (ENSRNOG00000050647) #165 AND Hspa1l (ENSRNOG00000047966) #167

DISTANT LINK BETWEEN Hspa1l (ENSRNOG00000047966) #163 AND Vars1 (ENSRNOG00000000867) #165
SYNTENIC BLOCK FROM Vars1 (ENSRNOG00000000867) #22 TO Msh5 (ENSRNOG00000000857) #25
DISTANT LINK BETWEEN Msh5 (ENSRNOG00000000857) #158 AND Clic1 (ENSRNOG00000029682) #160


DISTANT LINK BETWEEN Ddah2 (ENSRNOG00000000842) #157 AND Mpig6b (ENSRNOG00000026936) #159
SYNTENIC BLOCK FROM Mpig6b (ENSRNOG00000026936) #28 TO Ly6g6c (ENSRNOG00000070605) #29
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 41
SYNTENIC BLOCK FROM ENSGT00940000155565 #6 TO ENSGT00940000155739 #8 [REVERSED]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000160798 #5
ADJACENCY BETWEEN ENSGT00940000160798 #5 AND ENSGT00390000018295 #9
SYNTENIC BLOCK FROM ENSGT00390000018295 #9 TO ENSGT00940000161215 #19
DISTANT LINK BETWEEN ENSGT00940000161215 #102 AND ENSGT00940000162096 #100

DISTANT LINK BETWEEN ENSGT00940000162096 #104 AND ENSGT00940000157775 #102
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM Agpat1 (MGP_PahariEiJ_G0020461) #0 TO MGP_PahariEiJ_G0020474 #13
SYNTENIC BLOCK FROM MGP_PahariEiJ_G0020475 #13 TO MGP_PahariEiJ_G0020481 #19

DISTANT LINK BETWEEN MGP_PahariEiJ_G0020482 #98 AND Hspa1l (MGP_PahariEiJ_G0020484) #96

DISTANT LINK BETWEEN Hspa1l (MGP_PahariEiJ_G0020484) #100 AND Vars (MGP_PahariEiJ_G0020486) #98
SYNTENIC BLOCK FROM Vars (MGP_PahariEiJ_G0020486) #22 TO Ly6g6d (MGP_PahariEiJ_G0020494) #30
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 34
SYNTENIC BLOCK FROM ENSGT00940000155565 #6 TO ENSGT00940000155739 #8 [REVERSED]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000160798 #5
ADJACENCY BETWEEN ENSGT00940000160798 #5 AND ENSGT00390000018295 #9
SYNTENIC BLOCK FROM ENSGT00390000018295 #9 TO ENSGT00940000161215 #19
DISTANT LINK BETWEEN ENSGT00940000161215 #461 AND ENSGT00940000162096 #459

DISTANT LINK BETWEEN ENSGT00940000162096 #463 AND ENSGT00940000157775 #461
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30
> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM Agpat1 (MGP_CAROLIEiJ_G0021466) #0 TO MGP_CAROLIEiJ_G0021479 #13
SYNTENIC BLOCK FROM MGP_CAROLIEiJ_G0021480 #13 TO MGP_CAROLIEiJ_G0021486 #19
SYNTENIC BLOCK FROM MGP_CAROLIEiJ_G0021488 #19 TO Hspa1l (MGP_CAROLIEiJ_G0021489) #20
DISTANT LINK BETWEEN Hspa1l (MGP_CAROLIEiJ_G0021489) #474 AND Vars (MGP_CAROLIEiJ_G0021491) #472
SYNTENIC BLOCK FROM Vars (MGP_CAROLIEiJ_G0021491) #22 TO Ly6g6d (MGP_CAROLIEiJ_G0021499) #30
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000160798 #5
ADJACENCY BETWEEN ENSGT00940000160798 #5 AND ENSGT00390000018295 #9
SYNTENIC BLOCK FROM ENSGT00390000018295 #9 TO ENSGT00940000161215 #19
DISTANT LINK BETWEEN ENSGT00940000161215 #450 AND ENSGT00940000162096 #448

DISTANT LINK BETWEEN ENSGT00940000162096 #452 AND ENSGT00940000157775 #450
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30
>> CHROMOSOME 46
SYNTENIC BLOCK FROM ENSGT00940000155565 #6 TO ENSGT00940000155739 #8 [REVERSED]
> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000160798 #5 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000160798 #498 AND ENSGT00940000155565 #500
SYNTENIC BLOCK FROM ENSGT00940000155565 #6 TO ENSGT00940000155739 #8 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000018295 #495 AND ENSGT00390000006425 #499
SYNTENIC BLOCK FROM ENSGT00390000006425 #10 TO ENSGT00940000161215 #19 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000161215 #484 AND ENSGT00940000162096 #486
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000162096 #482 AND ENSGT00940000157775 #484
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30 [REVERSED]
> spretus [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM Agpat1 (MGP_SPRETEiJ_G0022372) #0 TO Atf6b (MGP_SPRETEiJ_G0022377) #5
DISTANT LINK BETWEEN Atf6b (MGP_SPRETEiJ_G0022377) #454 AND MGP_SPRETEiJ_G0022380 #451

SYNTENIC BLOCK FROM MGP_SPRETEiJ_G0022378 #8 TO MGP_SPRETEiJ_G0022379 #9
DISTANT LINK BETWEEN MGP_SPRETEiJ_G0022379 #455 AND Dxo (MGP_SPRETEiJ_G0022381) #453
SYNTENIC BLOCK FROM Dxo (MGP_SPRETEiJ_G0022381) #10 TO MGP_SPRETEiJ_G0022384 #13
SYNTENIC BLOCK FROM MGP_SPRETEiJ_G0022385 #13 TO MGP_SPRETEiJ_G0022391 #19

DISTANT LINK BETWEEN MGP_SPRETEiJ_G0022392 #468 AND Hspa1l (MGP_SPRETEiJ_G0022394) #466

DISTANT LINK BETWEEN Hspa1l (MGP_SPRETEiJ_G0022394) #470 AND Vars (MGP_SPRETEiJ_G0022396) #468
SYNTENIC BLOCK FROM Vars (MGP_SPRETEiJ_G0022396) #22 TO Ly6g6d (MGP_SPRETEiJ_G0022404) #30
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 2394
SYNTENIC BLOCK FROM ENSMSIG00000029826 #10 TO C2 (ENSMSIG00000029738) #14
ADJACENCY BETWEEN C2 (ENSMSIG00000029738) #14 AND Ehmt2 (ENSMSIG00000016591) #16
SYNTENIC BLOCK FROM Ehmt2 (ENSMSIG00000016591) #16 TO Neu1 (ENSMSIG00000016370) #18
DISTANT LINK BETWEEN Neu1 (ENSMSIG00000016370) #32 AND ENSMSIG00000016326 #35

DISTANT LINK BETWEEN ENSMSIG00000016326 #28 AND Vars (ENSMSIG00000006467) #32
SYNTENIC BLOCK FROM Vars (ENSMSIG00000006467) #22 TO Ly6g6c (ENSMSIG00000005875) #29
>> CHROMOSOME 1614
SYNTENIC BLOCK FROM ENSMSIG00000001312 #2 TO ENSMSIG00000000683 #6
>> CHROMOSOME 229
SYNTENIC BLOCK FROM ENSMSIG00000001879 #6 TO C4b (ENSMSIG00000001652) #8
> Mouse [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM Agpat1 (ENSMUSG00000034254) #0 TO Tnxb (ENSMUSG00000033327) #6
DISTANT LINK BETWEEN Tnxb (ENSMUSG00000033327) #510 AND Cyp21a1 (ENSMUSG00000024365) #508


DISTANT LINK BETWEEN C4b (ENSMUSG00000073418) #511 AND Stk19 (ENSMUSG00000061207) #509
SYNTENIC BLOCK FROM Stk19 (ENSMUSG00000061207) #9 TO Cfb (ENSMUSG00000090231) #13
DISTANT LINK BETWEEN Cfb (ENSMUSG00000090231) #517 AND C2 (ENSMUSG00000024371) #515
SYNTENIC BLOCK FROM C2 (ENSMUSG00000024371) #14 TO Hspa1b (ENSMUSG00000090877) #19
SYNTENIC BLOCK FROM Hspa1a (ENSMUSG00000091971) #19 TO Hspa1l (ENSMUSG00000007033) #20
DISTANT LINK BETWEEN Hspa1l (ENSMUSG00000007033) #526 AND Vars (ENSMUSG00000007029) #524
SYNTENIC BLOCK FROM Vars (ENSMUSG00000007029) #22 TO Ly6g6d (ENSMUSG00000073413) #30
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000162096 #20 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000162096 #103 AND ENSGT00940000157775 #105
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30 [REVERSED]
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000158338 #7 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000158338 #7 AND ENSGT00390000018295 #9
SYNTENIC BLOCK FROM ENSGT00390000018295 #9 TO ENSGT00940000162096 #20 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000162096 #91 AND ENSGT00940000157775 #93
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30 [REVERSED]
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM Agpat1 (ENSPEMG00000016710) #0 TO Cyp21a1 (ENSPEMG00000014963) #7 [REVERSED]
DISTANT LINK BETWEEN Cyp21a1 (ENSPEMG00000014963) #139 AND Stk19 (ENSPEMG00000015476) #141
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN Dxo (ENSPEMG00000009229) #138 AND Skic2 (ENSPEMG00000019001) #140
SYNTENIC BLOCK FROM Skic2 (ENSPEMG00000019001) #11 TO Neu1 (ENSPEMG00000009374) #18 [REVERSED]
DISTANT LINK BETWEEN Neu1 (ENSPEMG00000009374) #129 AND ENSPEMG00000028093 #131
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSPEMG00000027556 #128 AND Hspa1l (ENSPEMG00000010938) #130
 [REVERSED]
DISTANT LINK BETWEEN Hspa1l (ENSPEMG00000010938) #126 AND Vars (ENSPEMG00000006639) #128
SYNTENIC BLOCK FROM Vars (ENSPEMG00000006639) #22 TO Ly6g6d (ENSPEMG00000006406) #30 [REVERSED]
> Prairie vole [MODERNSPECIES]
>> CHROMOSOME 170
SYNTENIC BLOCK FROM Agpat1 (ENSMOCG00000019018) #0 TO Fkbpl (ENSMOCG00000005479) #4 [REVERSED]
DISTANT LINK BETWEEN Fkbpl (ENSMOCG00000005479) #86 AND Tnxb (ENSMOCG00000010394) #88
SYNTENIC BLOCK FROM Tnxb (ENSMOCG00000010394) #6 TO Cyp21a1 (ENSMOCG00000016151) #7 [REVERSED]
ADJACENCY BETWEEN Cyp21a1 (ENSMOCG00000016151) #7 AND Stk19 (ENSMOCG00000021590) #9
SYNTENIC BLOCK FROM Stk19 (ENSMOCG00000021590) #9 TO Cfb (ENSMOCG00000001320) #13 [REVERSED]
ADJACENCY BETWEEN Cfb (ENSMOCG00000001320) #13 AND Zbtb12 (ENSMOCG00000002711) #15
SYNTENIC BLOCK FROM Zbtb12 (ENSMOCG00000002711) #15 TO Hspa1l (ENSMOCG00000003223) #20 [REVERSED]
DISTANT LINK BETWEEN Hspa1l (ENSMOCG00000003223) #72 AND Vars (ENSMOCG00000015404) #74
SYNTENIC BLOCK FROM Vars (ENSMOCG00000015404) #22 TO Ly6g6d (ENSMOCG00000006983) #30 [REVERSED]
> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 43
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00950000182944.D #18 [REVERSED]
ADJACENCY BETWEEN ENSGT00950000182944.D #18 AND ENSGT00940000162096 #20
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000162096 #26 AND ENSGT00940000157775 #28
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30 [REVERSED]
> Chinese hamster chok1gshd [MODERNSPECIES]
>> CHROMOSOME 303
SYNTENIC BLOCK FROM Agpat1 (ENSCGRG00001009986) #0 TO C2 (ENSCGRG00001005331) #14
DISTANT LINK BETWEEN C2 (ENSCGRG00001005331) #70 AND Zbtb12 (ENSCGRG00001002052) #68
SYNTENIC BLOCK FROM Zbtb12 (ENSCGRG00001002052) #15 TO Neu1 (ENSCGRG00001010017) #18

DISTANT LINK BETWEEN ENSCGRG00001001109 #74 AND Hspa1l (ENSCGRG00001000703) #69

DISTANT LINK BETWEEN Hspa1l (ENSCGRG00001000703) #76 AND Vars (ENSCGRG00001005686) #74
SYNTENIC BLOCK FROM Vars (ENSCGRG00001005686) #22 TO Ly6g6d (ENSCGRG00001009978) #30
> Golden Hamster [MODERNSPECIES]
>> CHROMOSOME 856
SYNTENIC BLOCK FROM Agpat1 (ENSMAUG00000011278) #0 TO ENSMAUG00000019956 #3 [REVERSED]
DISTANT LINK BETWEEN ENSMAUG00000019956 #38 AND Tnxb (ENSMAUG00000019386) #40
SYNTENIC BLOCK FROM Tnxb (ENSMAUG00000019386) #6 TO C4b (ENSMAUG00000015130) #8 [REVERSED]
ADJACENCY BETWEEN C4b (ENSMAUG00000015130) #8 AND Dxo (ENSMAUG00000022102) #10
SYNTENIC BLOCK FROM Dxo (ENSMAUG00000022102) #10 TO Cfb (ENSMAUG00000005083) #13 [REVERSED]
ADJACENCY BETWEEN Cfb (ENSMAUG00000005083) #13 AND Zbtb12 (ENSMAUG00000008051) #15
SYNTENIC BLOCK FROM Zbtb12 (ENSMAUG00000008051) #15 TO Neu1 (ENSMAUG00000006425) #18 [REVERSED]
DISTANT LINK BETWEEN Neu1 (ENSMAUG00000006425) #26 AND Hspa1l (ENSMAUG00000015361) #28
 [REVERSED]
DISTANT LINK BETWEEN Hspa1l (ENSMAUG00000015361) #24 AND Vars (ENSMAUG00000006715) #26
SYNTENIC BLOCK FROM Vars (ENSMAUG00000006715) #22 TO Ly6g6d (ENSMAUG00000009349) #30 [REVERSED]
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 220

ADJACENCY BETWEEN Agpat1 (ENSJJAG00000018999) #0 AND Ppt2 (ENSJJAG00000018803) #2
SYNTENIC BLOCK FROM Ppt2 (ENSJJAG00000018803) #2 TO Prrt1 (ENSJJAG00000018708) #3
ADJACENCY BETWEEN Prrt1 (ENSJJAG00000018708) #3 AND Atf6b (ENSJJAG00000013700) #5
SYNTENIC BLOCK FROM Atf6b (ENSJJAG00000013700) #5 TO Tnxb (ENSJJAG00000011509) #6
ADJACENCY BETWEEN Tnxb (ENSJJAG00000011509) #6 AND C4b (ENSJJAG00000019955) #8
SYNTENIC BLOCK FROM C4b (ENSJJAG00000019955) #8 TO Cfb (ENSJJAG00000020383) #13
ADJACENCY BETWEEN Cfb (ENSJJAG00000020383) #13 AND Ehmt2 (ENSJJAG00000011038) #16
SYNTENIC BLOCK FROM Ehmt2 (ENSJJAG00000011038) #16 TO Neu1 (ENSJJAG00000015681) #18
DISTANT LINK BETWEEN Neu1 (ENSJJAG00000015681) #0 AND ENSJJAG00000012778 #50
 [REVERSED]
SYNTENIC BLOCK FROM ENSJJAG00000012405 #19 TO Vwa7 (ENSJJAG00000023036) #23 [REVERSED]
ADJACENCY BETWEEN Vwa7 (ENSJJAG00000023036) #23 AND Msh5 (ENSJJAG00000000116) #25
SYNTENIC BLOCK FROM Msh5 (ENSJJAG00000000116) #25 TO Ddah2 (ENSJJAG00000011992) #27 [REVERSED]
ADJACENCY BETWEEN Ddah2 (ENSJJAG00000011992) #27 AND Ly6g6c (ENSJJAG00000012162) #29
 [REVERSED]
> Kangaroo rat [MODERNSPECIES]
>> CHROMOSOME 519
SYNTENIC BLOCK FROM Agpat1 (ENSDORG00000009925) #0 TO Cfb (ENSDORG00000011702) #13 [REVERSED]
ADJACENCY BETWEEN Cfb (ENSDORG00000011702) #13 AND Ehmt2 (ENSDORG00000011397) #16
SYNTENIC BLOCK FROM Ehmt2 (ENSDORG00000011397) #16 TO ENSDORG00000016437 #19 [REVERSED]
SYNTENIC BLOCK FROM ENSDORG00000023875 #19 TO Hspa1l (ENSDORG00000016436) #20 [REVERSED]
>> CHROMOSOME 457
SYNTENIC BLOCK FROM Vars (ENSDORG00000016433) #22 TO Ly6g6d (ENSDORG00000028191) #30 [REVERSED]
> Lagomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 62
SYNTENIC BLOCK FROM ENSGT00390000008726.h.b #0 TO ENSGT00940000162382 #3 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000162382 #9 AND ENSGT00920000149187 #7
SYNTENIC BLOCK FROM ENSGT00920000149187 #4 TO ENSGT00940000160798 #5 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000160798 #12 AND ENSGT00940000155565 #10
SYNTENIC BLOCK FROM ENSGT00940000155565 #6 TO ENSGT00940000162934 #14 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000162934 #14 AND ENSGT00940000159459 #16
SYNTENIC BLOCK FROM ENSGT00940000159459 #16 TO ENSGT00950000182944.D #18 [REVERSED]
DISTANT LINK BETWEEN ENSGT00950000182944.D #25 AND ENSGT00940000157775 #23
SYNTENIC BLOCK FROM ENSGT00940000157775 #22 TO ENSGT00390000015960.a.b.b #30 [REVERSED]
>> CHROMOSOME 481
 [REVERSED]

> Pika [MODERNSPECIES]
>> CHROMOSOME 4594

DISTANT LINK BETWEEN ENSOPRG00000004338 #25 AND FKBPL (ENSOPRG00000004299) #27
SYNTENIC BLOCK FROM FKBPL (ENSOPRG00000004299) #4 TO ATF6B (ENSOPRG00000019053) #5
DISTANT LINK BETWEEN ATF6B (ENSOPRG00000019053) #22 AND TNXB (ENSOPRG00000004199) #24
SYNTENIC BLOCK FROM TNXB (ENSOPRG00000004199) #6 TO ENSOPRG00000004052 #8
ADJACENCY BETWEEN ENSOPRG00000004052 #8 AND SKIC2 (ENSOPRG00000003972) #11
SYNTENIC BLOCK FROM SKIC2 (ENSOPRG00000003972) #11 TO C2 (ENSOPRG00000003873) #14
ADJACENCY BETWEEN C2 (ENSOPRG00000003873) #14 AND EHMT2 (ENSOPRG00000003803) #16
SYNTENIC BLOCK FROM EHMT2 (ENSOPRG00000003803) #16 TO ENSOPRG00000003743 #18
DISTANT LINK BETWEEN ENSOPRG00000003743 #10 AND VARS1 (ENSOPRG00000003607) #13
SYNTENIC BLOCK FROM VARS1 (ENSOPRG00000003607) #22 TO MSH5 (ENSOPRG00000003510) #25
ADJACENCY BETWEEN MSH5 (ENSOPRG00000003510) #25 AND DDAH2 (ENSOPRG00000003489) #27
SYNTENIC BLOCK FROM DDAH2 (ENSOPRG00000003489) #27 TO LY6G6C (ENSOPRG00000003454) #29
> Rabbit [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM AGPAT1 (ENSOCUG00000005498) #0 TO ATF6B (ENSOCUG00000023089) #5
DISTANT LINK BETWEEN ATF6B (ENSOCUG00000023089) #194 AND ENSOCUG00000007056 #196


DISTANT LINK BETWEEN ENSOCUG00000038853 #193 AND CYP21A2 (ENSOCUG00000007053) #195
SYNTENIC BLOCK FROM CYP21A2 (ENSOCUG00000007053) #7 TO C2 (ENSOCUG00000006999) #14
ADJACENCY BETWEEN C2 (ENSOCUG00000006999) #14 AND EHMT2 (ENSOCUG00000006980) #16
SYNTENIC BLOCK FROM EHMT2 (ENSOCUG00000006980) #16 TO SLC44A4 (ENSOCUG00000006970) #17
DISTANT LINK BETWEEN SLC44A4 (ENSOCUG00000006970) #182 AND ENSOCUG00000036082 #184
 [REVERSED]

DISTANT LINK BETWEEN ENSOCUG00000035524 #181 AND HSPA1L (ENSOCUG00000002584) #183

DISTANT LINK BETWEEN HSPA1L (ENSOCUG00000002584) #179 AND VARS1 (ENSOCUG00000022463) #181

DISTANT LINK BETWEEN VARS1 (ENSOCUG00000022463) #177 AND VWA7 (ENSOCUG00000007980) #179


DISTANT LINK BETWEEN SAPCD1 (ENSOCUG00000027991) #176 AND MSH5 (ENSOCUG00000007965) #178
SYNTENIC BLOCK FROM MSH5 (ENSOCUG00000007965) #25 TO LY6G6D (ENSOCUG00000038545) #30
> Tree shrew [MODERNSPECIES]
>> CHROMOSOME 5179
SYNTENIC BLOCK FROM STK19 (ENSTBEG00000006601) #9 TO SKIC2 (ENSTBEG00000003462) #11
ADJACENCY BETWEEN SKIC2 (ENSTBEG00000003462) #11 AND CFB (ENSTBEG00000001359) #13
SYNTENIC BLOCK FROM CFB (ENSTBEG00000001359) #13 TO C2 (ENSTBEG00000008966) #14