> Euarchontoglires_A [ANCESTRALSPECIES]
>> CHROMOSOME 5

SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16












> Glires [ANCESTRALSPECIES]
>> CHROMOSOME 4

SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16












> Rodentia [ANCESTRALSPECIES]
>> CHROMOSOME 5

SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16












> Rodentia_B [ANCESTRALSPECIES]
>> CHROMOSOME 3

SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16












> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 2
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 5
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 22
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 21

SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16













> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM ENSGT00940000157033 #14 TO ENSGT00940000158153 #25 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000158153 #25 AND ENSGT00940000160214 #27
SYNTENIC BLOCK FROM ENSGT00940000160214 #27 TO ENSGT00390000017998 #30 [REVERSED]
> Chinese hamster chok1gshd [REFERENCESPECIES]
>> CHROMOSOME 83
SYNTENIC BLOCK FROM Frs2 (ENSCGRG00001012645) #14 TO Tmem19 (ENSCGRG00001017163) #30
> Golden Hamster [MODERNSPECIES]
>> CHROMOSOME 732
SYNTENIC BLOCK FROM Frs2 (ENSMAUG00000017762) #14 TO Ptprb (ENSMAUG00000021522) #22 [REVERSED]
DISTANT LINK BETWEEN Ptprb (ENSMAUG00000021522) #9 AND Ptprr (ENSMAUG00000000754) #11
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSMAUG00000014901 #8 AND Lgr5 (ENSMAUG00000020934) #10
SYNTENIC BLOCK FROM Lgr5 (ENSMAUG00000020934) #27 TO ENSMAUG00000021091 #28 [REVERSED]
DISTANT LINK BETWEEN ENSMAUG00000021091 #5 AND Thap2 (ENSMAUG00000012471) #7
SYNTENIC BLOCK FROM Thap2 (ENSMAUG00000012471) #29 TO Tmem19 (ENSMAUG00000000365) #30 [REVERSED]
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 29
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 9

SYNTENIC BLOCK FROM Lrrc10 (ENSPEMG00000004624) #15 TO Cct2 (ENSPEMG00000022366) #16






SYNTENIC BLOCK FROM Ptprr (ENSPEMG00000023593) #23 TO ENSPEMG00000030116 #24





> Prairie vole [MODERNSPECIES]
>> CHROMOSOME 10

ADJACENCY BETWEEN Frs2 (ENSMOCG00000012695) #14 AND Cct2 (ENSMOCG00000001863) #16
 [REVERSED]
SYNTENIC BLOCK FROM Best3 (ENSMOCG00000012175) #17 TO Ptprr (ENSMOCG00000016397) #23
ADJACENCY BETWEEN Ptprr (ENSMOCG00000016397) #23 AND Tspan8 (ENSMOCG00000002461) #25

ADJACENCY BETWEEN Tspan8 (ENSMOCG00000002461) #25 AND Lgr5 (ENSMOCG00000014250) #27

DISTANT LINK BETWEEN Lgr5 (ENSMOCG00000014250) #93 AND ENSMOCG00000020539 #91
SYNTENIC BLOCK FROM ENSMOCG00000020539 #28 TO Tmem19 (ENSMOCG00000019520) #30
> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 22

SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16













> Rat [MODERNSPECIES]
>> CHROMOSOME 17
 [REVERSED]
ADJACENCY BETWEEN Frs2 (ENSRNOG00000005642) #14 AND Cct2 (ENSRNOG00000021317) #16

SYNTENIC BLOCK FROM Best3 (ENSRNOG00000005491) #17 TO Myrfl (ENSRNOG00000021833) #19 [REVERSED]
DISTANT LINK BETWEEN Myrfl (ENSRNOG00000021833) #544 AND Cnot2 (ENSRNOG00000004909) #546
SYNTENIC BLOCK FROM Cnot2 (ENSRNOG00000004909) #20 TO Ptprb (ENSRNOG00000055293) #22 [REVERSED]
DISTANT LINK BETWEEN Ptprb (ENSRNOG00000055293) #540 AND Ptprr (ENSRNOG00000004483) #542
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN Taf7l-ps1 (ENSRNOG00000022632) #539 AND Tspan8 (ENSRNOG00000004411) #541
 [REVERSED]
ADJACENCY BETWEEN Tspan8 (ENSRNOG00000004411) #25 AND Lgr5 (ENSRNOG00000004221) #27
 [REVERSED]
DISTANT LINK BETWEEN Lgr5 (ENSRNOG00000004221) #536 AND Zfc3h1 (ENSRNOG00000053060) #538
SYNTENIC BLOCK FROM Zfc3h1 (ENSRNOG00000053060) #28 TO Tmem19 (ENSRNOG00000003985) #30 [REVERSED]
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 23
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 22
 [REVERSED]
SYNTENIC BLOCK FROM Lrrc10 (MGP_PahariEiJ_G0031261) #15 TO Cct2 (MGP_PahariEiJ_G0031260) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 11
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 1

SYNTENIC BLOCK FROM Lrrc10 (MGP_CAROLIEiJ_G0015826) #15 TO Cct2 (MGP_CAROLIEiJ_G0015827) #16






SYNTENIC BLOCK FROM Ptprr (MGP_CAROLIEiJ_G0015818) #23 TO MGP_CAROLIEiJ_G0015819 #24





> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 10
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 7

SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16













> spretus [MODERNSPECIES]
>> CHROMOSOME 1

SYNTENIC BLOCK FROM Lrrc10 (MGP_SPRETEiJ_G0016649) #15 TO Cct2 (MGP_SPRETEiJ_G0016650) #16






SYNTENIC BLOCK FROM Ptprr (MGP_SPRETEiJ_G0016640) #23 TO MGP_SPRETEiJ_G0016641 #24





> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 2651

ADJACENCY BETWEEN ENSMSIG00000017572 #25 AND Lgr5 (ENSMSIG00000017617) #27

DISTANT LINK BETWEEN Lgr5 (ENSMSIG00000017617) #3 AND Zfc3h1 (ENSMSIG00000017827) #1
SYNTENIC BLOCK FROM Zfc3h1 (ENSMSIG00000017827) #28 TO Tmem19 (ENSMSIG00000017920) #30
>> CHROMOSOME 2932

SYNTENIC BLOCK FROM Lrrc10 (ENSMSIG00000009273) #15 TO Cct2 (ENSMSIG00000009279) #16







> Mouse [MODERNSPECIES]
>> CHROMOSOME 1

SYNTENIC BLOCK FROM Lrrc10 (ENSMUSG00000060187) #15 TO Cct2 (ENSMUSG00000034024) #16












> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 691
SYNTENIC BLOCK FROM Cnot2 (ENSNGAG00000020842) #20 TO Ptprr (ENSNGAG00000009618) #23
ADJACENCY BETWEEN Ptprr (ENSNGAG00000009618) #23 AND Tspan8 (ENSNGAG00000023915) #25

>> CHROMOSOME 1847
 [REVERSED]
SYNTENIC BLOCK FROM Lrrc10 (ENSNGAG00000003213) #15 TO Cct2 (ENSNGAG00000016113) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 890
SYNTENIC BLOCK FROM Lgr5 (ENSNGAG00000013971) #27 TO Tmem19 (ENSNGAG00000001700) #30 [REVERSED]
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 42
 [REVERSED]
SYNTENIC BLOCK FROM Lrrc10 (ENSJJAG00000004483) #15 TO ENSJJAG00000019620 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Kangaroo rat [MODERNSPECIES]
>> CHROMOSOME 322
 [REVERSED]
SYNTENIC BLOCK FROM Lrrc10 (ENSDORG00000010326) #15 TO Cct2 (ENSDORG00000010325) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Rodentia_A [ANCESTRALSPECIES]
>> CHROMOSOME 4
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Hystricomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 9
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Hystricomorpha_a [ANCESTRALSPECIES]
>> CHROMOSOME 7
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Guinea pig [MODERNSPECIES]
>> CHROMOSOME 9
 [REVERSED]
ADJACENCY BETWEEN FRS2 (ENSCPOG00000002836) #14 AND CCT2 (ENSCPOG00000012867) #16

SYNTENIC BLOCK FROM BEST3 (ENSCPOG00000001321) #17 TO CNOT2 (ENSCPOG00000004756) #20 [REVERSED]
ADJACENCY BETWEEN CNOT2 (ENSCPOG00000004756) #20 AND PTPRB (ENSCPOG00000005700) #22
SYNTENIC BLOCK FROM PTPRB (ENSCPOG00000005700) #22 TO PTPRR (ENSCPOG00000005707) #23 [REVERSED]
ADJACENCY BETWEEN PTPRR (ENSCPOG00000005707) #23 AND TSPAN8 (ENSCPOG00000034308) #25
 [REVERSED]
ADJACENCY BETWEEN TSPAN8 (ENSCPOG00000034308) #25 AND LGR5 (ENSCPOG00000036056) #27
SYNTENIC BLOCK FROM LGR5 (ENSCPOG00000036056) #27 TO TMEM19 (ENSCPOG00000025019) #30 [REVERSED]
> Hystricomorpha_b [ANCESTRALSPECIES]
>> CHROMOSOME 13

SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16












> Degu [MODERNSPECIES]
>> CHROMOSOME 88
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Long-tailed chinchilla [MODERNSPECIES]
>> CHROMOSOME 112
 [REVERSED]
SYNTENIC BLOCK FROM LRRC10 (ENSCLAG00000017615) #15 TO CCT2 (ENSCLAG00000007009) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Naked mole-rat female [MODERNSPECIES]
>> CHROMOSOME 31
 [REVERSED]
DISTANT LINK BETWEEN ENSHGLG00000000051 #404 AND TAF7L (ENSHGLG00000008998) #883

>> CHROMOSOME 8
 [REVERSED]
ADJACENCY BETWEEN FRS2 (ENSHGLG00000004690) #14 AND ENSHGLG00000008737 #16

 [REVERSED]
DISTANT LINK BETWEEN BEST3 (ENSHGLG00000005639) #66 AND ENSHGLG00000015773 #68
SYNTENIC BLOCK FROM ENSHGLG00000015773 #18 TO ENSHGLG00000016095 #19 [REVERSED]
DISTANT LINK BETWEEN ENSHGLG00000016095 #62 AND ENSHGLG00000039489 #65
SYNTENIC BLOCK FROM ENSHGLG00000039489 #20 TO PTPRB (ENSHGLG00000017872) #22 [REVERSED]
DISTANT LINK BETWEEN PTPRB (ENSHGLG00000017872) #58 AND PTPRR (ENSHGLG00000005019) #60
 [REVERSED]
DISTANT LINK BETWEEN PTPRR (ENSHGLG00000005019) #56 AND TSPAN8 (ENSHGLG00000009287) #58
 [REVERSED]
ADJACENCY BETWEEN TSPAN8 (ENSHGLG00000009287) #25 AND LGR5 (ENSHGLG00000004903) #27
SYNTENIC BLOCK FROM LGR5 (ENSHGLG00000004903) #27 TO ZFC3H1 (ENSHGLG00000014297) #28 [REVERSED]
ADJACENCY BETWEEN ZFC3H1 (ENSHGLG00000014297) #28 AND ENSHGLG00000040461 #30
 [REVERSED]
> Sciuridae [ANCESTRALSPECIES]
>> CHROMOSOME 14

SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16












> Eurasian red squirrel [MODERNSPECIES]
>> CHROMOSOME 14
 [REVERSED]
SYNTENIC BLOCK FROM LRRC10 (ENSSVLG00005016313) #15 TO CCT2 (ENSSVLG00005016241) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Marmotini [ANCESTRALSPECIES]
>> CHROMOSOME 4

SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16












> Alpin marmot [MODERNSPECIES]
>> CHROMOSOME 11

SYNTENIC BLOCK FROM LRRC10 (ENSMMMG00000003894) #15 TO CCT2 (ENSMMMG00000003897) #16












> Marmotini_b [ANCESTRALSPECIES]
>> CHROMOSOME 3

SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16












> Squirrel [MODERNSPECIES]
>> CHROMOSOME 145
 [REVERSED]
SYNTENIC BLOCK FROM LRRC10 (ENSSTOG00000014043) #15 TO CCT2 (ENSSTOG00000014029) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 168

ADJACENCY BETWEEN TSPAN8 (ENSSTOG00000013147) #25 AND LGR5 (ENSSTOG00000002616) #27
SYNTENIC BLOCK FROM LGR5 (ENSSTOG00000002616) #27 TO TMEM19 (ENSSTOG00000002706) #30
> Arctic ground squirrel [MODERNSPECIES]
>> CHROMOSOME 45
 [REVERSED]
SYNTENIC BLOCK FROM LRRC10 (ENSUPAG00010023413) #15 TO CCT2 (ENSUPAG00010023412) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Lagomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 63

SYNTENIC BLOCK FROM ENSGT00940000155040.b #15 TO ENSGT00550000074930 #16












> Pika [MODERNSPECIES]
>> CHROMOSOME 232
SYNTENIC BLOCK FROM CNOT2 (ENSOPRG00000002600) #20 TO PTPRR (ENSOPRG00000002730) #23
>> CHROMOSOME 1626
SYNTENIC BLOCK FROM LGR5 (ENSOPRG00000008054) #27 TO ZFC3H1 (ENSOPRG00000008075) #28
>> CHROMOSOME 3035
 [REVERSED]
SYNTENIC BLOCK FROM LRRC10 (ENSOPRG00000003563) #15 TO CCT2 (ENSOPRG00000003525) #16 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Rabbit [MODERNSPECIES]
>> CHROMOSOME 15

ADJACENCY BETWEEN FRS2 (ENSOCUG00000017192) #14 AND CCT2 (ENSOCUG00000017199) #16
 [REVERSED]
SYNTENIC BLOCK FROM BEST3 (ENSOCUG00000022219) #17 TO PTPRR (ENSOCUG00000012065) #23
ADJACENCY BETWEEN PTPRR (ENSOCUG00000012065) #23 AND TSPAN8 (ENSOCUG00000025509) #25

ADJACENCY BETWEEN TSPAN8 (ENSOCUG00000025509) #25 AND LGR5 (ENSOCUG00000009203) #27
SYNTENIC BLOCK FROM LGR5 (ENSOCUG00000009203) #27 TO TMEM19 (ENSOCUG00000012539) #30
> Tree shrew [MODERNSPECIES]
>> CHROMOSOME 1513
SYNTENIC BLOCK FROM ZFC3H1 (ENSTBEG00000016441) #28 TO TMEM19 (ENSTBEG00000017033) #30
>> CHROMOSOME 3397

ADJACENCY BETWEEN FRS2 (ENSTBEG00000007035) #14 AND CCT2 (ENSTBEG00000007489) #16
 [REVERSED]
>> CHROMOSOME 1194
SYNTENIC BLOCK FROM ENSTBEG00000000393 #17 TO RAB3IP (ENSTBEG00000000496) #18
>> CHROMOSOME 395
SYNTENIC BLOCK FROM ENSTBEG00000006885 #20 TO PTPRR (ENSTBEG00000001187) #23