> Rodentia_A [ANCESTRALSPECIES] >> CHROMOSOME 2 SYNTENIC BLOCK FROM ENSGT01040000240503.A.a.a #0 TO ENSGT00510000048144 #3 [REVERSED] DISTANT LINK BETWEEN ENSGT00510000048144 #767 AND ENSGT00390000008502 #769 [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSGT00690000102225 #766 AND ENSGT01030000234623.a.b.b #768 SYNTENIC BLOCK FROM ENSGT01030000234623.a.b.b #6 TO ENSGT00390000009048.a.a #13 [REVERSED] DISTANT LINK BETWEEN ENSGT00390000009048.a.a #757 AND ENSGT00940000158701 #759 SYNTENIC BLOCK FROM ENSGT00940000158701 #14 TO ENSGT00940000161523 #17 [REVERSED] DISTANT LINK BETWEEN ENSGT00940000161523 #752 AND ENSGT00950000183113.b.a #754 SYNTENIC BLOCK FROM ENSGT00950000183113.b.a #18 TO ENSGT00390000000491 #27 [REVERSED] DISTANT LINK BETWEEN ENSGT00390000000491 #739 AND ENSGT00390000004927 #743 [REVERSED] > Sciuridae [ANCESTRALSPECIES] >> CHROMOSOME 11 SYNTENIC BLOCK FROM ENSGT01040000240503.A.a.a #0 TO ENSGT00510000048144 #3 DISTANT LINK BETWEEN ENSGT00510000048144 #422 AND ENSGT00390000008502 #420 DISTANT LINK BETWEEN ENSGT00690000102225 #423 AND ENSGT01030000234623.a.b.b #421 SYNTENIC BLOCK FROM ENSGT01030000234623.a.b.b #6 TO ENSGT00390000009048.a.a #13 DISTANT LINK BETWEEN ENSGT00390000009048.a.a #432 AND ENSGT00940000158701 #430 SYNTENIC BLOCK FROM ENSGT00940000158701 #14 TO ENSGT00940000161523 #17 DISTANT LINK BETWEEN ENSGT00940000161523 #437 AND ENSGT00950000183113.b.a #435 SYNTENIC BLOCK FROM ENSGT00950000183113.b.a #18 TO ENSGT00390000000491 #27 DISTANT LINK BETWEEN ENSGT00390000000491 #450 AND ENSGT00390000004927 #446 > Marmotini [ANCESTRALSPECIES] >> CHROMOSOME 9 SYNTENIC BLOCK FROM ENSGT01040000240503.A.a.a #0 TO ENSGT00510000048144 #3 DISTANT LINK BETWEEN ENSGT00510000048144 #293 AND ENSGT00390000008502 #291 DISTANT LINK BETWEEN ENSGT00690000102225 #294 AND ENSGT01030000234623.a.b.b #292 SYNTENIC BLOCK FROM ENSGT01030000234623.a.b.b #6 TO ENSGT00390000009048.a.a #13 DISTANT LINK BETWEEN ENSGT00390000009048.a.a #303 AND ENSGT00940000158701 #301 SYNTENIC BLOCK FROM ENSGT00940000158701 #14 TO ENSGT00940000161523 #17 DISTANT LINK BETWEEN ENSGT00940000161523 #308 AND ENSGT00950000183113.b.a #306 SYNTENIC BLOCK FROM ENSGT00950000183113.b.a #18 TO ENSGT00390000000491 #27 DISTANT LINK BETWEEN ENSGT00390000000491 #321 AND ENSGT00390000004927 #317 > Marmotini_b [ANCESTRALSPECIES] >> CHROMOSOME 4 SYNTENIC BLOCK FROM ENSGT01040000240503.A.a.a #0 TO ENSGT00510000048144 #3 DISTANT LINK BETWEEN ENSGT00510000048144 #291 AND ENSGT00390000008502 #289 DISTANT LINK BETWEEN ENSGT00690000102225 #292 AND ENSGT01030000234623.a.b.b #290 SYNTENIC BLOCK FROM ENSGT01030000234623.a.b.b #6 TO ENSGT00940000161523 #17 DISTANT LINK BETWEEN ENSGT00940000161523 #305 AND ENSGT00950000183113.b.a #303 SYNTENIC BLOCK FROM ENSGT00950000183113.b.a #18 TO ENSGT00390000000491 #27 DISTANT LINK BETWEEN ENSGT00390000000491 #316 AND ENSGT00940000164484 #314 SYNTENIC BLOCK FROM ENSGT00940000164484 #29 TO ENSGT00390000004927 #30 > Squirrel [REFERENCESPECIES] >> CHROMOSOME 71 SYNTENIC BLOCK FROM CTDSPL2 (ENSSTOG00000002215) #0 TO HAUS2 (ENSSTOG00000006207) #30 [REVERSED] > Arctic ground squirrel [MODERNSPECIES] >> CHROMOSOME 4 SYNTENIC BLOCK FROM CTDSPL2 (ENSUPAG00010010125) #0 TO WDR76 (ENSUPAG00010010229) #3 DISTANT LINK BETWEEN WDR76 (ENSUPAG00010010229) #73 AND HYPK (ENSUPAG00010010283) #71 DISTANT LINK BETWEEN MFAP1 (ENSUPAG00010010275) #74 AND SERINC4 (ENSUPAG00010010300) #72 DISTANT LINK BETWEEN SERINC4 (ENSUPAG00010010300) #76 AND ELL3 (ENSUPAG00010010367) #74 SYNTENIC BLOCK FROM ELL3 (ENSUPAG00010010367) #8 TO PDIA3 (ENSUPAG00010010414) #9 DISTANT LINK BETWEEN PDIA3 (ENSUPAG00010010414) #79 AND CATSPER2 (ENSUPAG00010010437) #77 SYNTENIC BLOCK FROM CATSPER2 (ENSUPAG00010010437) #10 TO MAP1A (ENSUPAG00010011785) #14 DISTANT LINK BETWEEN MAP1A (ENSUPAG00010011785) #85 AND TP53BP1 (ENSUPAG00010011808) #83 SYNTENIC BLOCK FROM TP53BP1 (ENSUPAG00010011808) #15 TO ZSCAN29 (ENSUPAG00010011982) #17 DISTANT LINK BETWEEN ZSCAN29 (ENSUPAG00010011982) #89 AND ADAL (ENSUPAG00010012022) #87 SYNTENIC BLOCK FROM ADAL (ENSUPAG00010012022) #18 TO CDAN1 (ENSUPAG00010012442) #27 DISTANT LINK BETWEEN CDAN1 (ENSUPAG00010012442) #100 AND ENSUPAG00010012822 #98 > Alpin marmot [MODERNSPECIES] >> CHROMOSOME 7 SYNTENIC BLOCK FROM CTDSPL2 (ENSMMMG00000018015) #0 TO ENSMMMG00000018185 #3 DISTANT LINK BETWEEN ENSMMMG00000018185 #307 AND HYPK (ENSMMMG00000018203) #305 DISTANT LINK BETWEEN MFAP1 (ENSMMMG00000018199) #308 AND SERINC4 (ENSMMMG00000018211) #306 SYNTENIC BLOCK FROM SERINC4 (ENSMMMG00000018211) #6 TO PPIP5K1 (ENSMMMG00000018436) #13 DISTANT LINK BETWEEN PPIP5K1 (ENSMMMG00000018436) #317 AND MAP1A (ENSMMMG00000018613) #315 SYNTENIC BLOCK FROM MAP1A (ENSMMMG00000018613) #14 TO ZSCAN29 (ENSMMMG00000018814) #17 DISTANT LINK BETWEEN ZSCAN29 (ENSMMMG00000018814) #322 AND ADAL (ENSMMMG00000018830) #320 SYNTENIC BLOCK FROM ADAL (ENSMMMG00000018830) #18 TO CDAN1 (ENSMMMG00000019058) #27 DISTANT LINK BETWEEN CDAN1 (ENSMMMG00000019058) #334 AND HAUS2 (ENSMMMG00000019271) #331 > Eurasian red squirrel [MODERNSPECIES] >> CHROMOSOME 11 SYNTENIC BLOCK FROM CTDSPL2 (ENSSVLG00005005170) #0 TO GOLM2 (ENSSVLG00005005117) #1 [REVERSED] DISTANT LINK BETWEEN GOLM2 (ENSSVLG00005005117) #937 AND FRMD5 (ENSSVLG00005004959) #939 SYNTENIC BLOCK FROM FRMD5 (ENSSVLG00005004959) #2 TO WDR76 (ENSSVLG00005004907) #3 [REVERSED] DISTANT LINK BETWEEN WDR76 (ENSSVLG00005004907) #934 AND HYPK (ENSSVLG00005004857) #936 [REVERSED] [REVERSED] DISTANT LINK BETWEEN MFAP1 (ENSSVLG00005004879) #933 AND SERINC4 (ENSSVLG00005004821) #935 SYNTENIC BLOCK FROM SERINC4 (ENSSVLG00005004821) #6 TO ENSSVLG00005004607 #12 [REVERSED] DISTANT LINK BETWEEN ENSSVLG00005004607 #925 AND PPIP5K1 (ENSSVLG00005004405) #927 SYNTENIC BLOCK FROM PPIP5K1 (ENSSVLG00005004405) #13 TO ADAL (ENSSVLG00005004166) #18 [REVERSED] DISTANT LINK BETWEEN ADAL (ENSSVLG00005004166) #918 AND TGM7 (ENSSVLG00005004123) #920 SYNTENIC BLOCK FROM TGM7 (ENSSVLG00005004123) #20 TO UBR1 (ENSSVLG00005003806) #25 [REVERSED] DISTANT LINK BETWEEN UBR1 (ENSSVLG00005003806) #909 AND TTBK2 (ENSSVLG00005003710) #913 SYNTENIC BLOCK FROM TTBK2 (ENSSVLG00005003710) #26 TO CDAN1 (ENSSVLG00005003669) #27 [REVERSED] DISTANT LINK BETWEEN CDAN1 (ENSSVLG00005003669) #316 AND ENSSVLG00005011655 #908 [REVERSED] [REVERSED] [REVERSED] > Hystricomorpha [ANCESTRALSPECIES] >> CHROMOSOME 43 SYNTENIC BLOCK FROM ENSGT01040000240503.A.a.a #0 TO ENSGT00510000048144 #3 [REVERSED] DISTANT LINK BETWEEN ENSGT00510000048144 #110 AND ENSGT00390000008502 #112 [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSGT00690000102225 #109 AND ENSGT00910000144347.x #111 SYNTENIC BLOCK FROM ENSGT00910000144347.x #7 TO ENSGT00940000155425 #9 [REVERSED] ADJACENCY BETWEEN ENSGT00940000155425 #9 AND ENSGT00950000182772.B.a.b #12 SYNTENIC BLOCK FROM ENSGT00950000182772.B.a.b #12 TO ENSGT00940000156677 #16 [REVERSED] DISTANT LINK BETWEEN ENSGT00940000156677 #100 AND ENSGT00940000161523 #102 SYNTENIC BLOCK FROM ENSGT00940000161523 #17 TO ENSGT00390000000491 #27 [REVERSED] DISTANT LINK BETWEEN ENSGT00390000000491 #88 AND ENSGT00390000004927.f #90 [REVERSED] >> CHROMOSOME 15 [REVERSED] > Hystricomorpha_a [ANCESTRALSPECIES] >> CHROMOSOME 25 SYNTENIC BLOCK FROM ENSGT01040000240503.A.a.a #0 TO ENSGT00510000048144 #3 DISTANT LINK BETWEEN ENSGT00510000048144 #156 AND ENSGT00390000008502 #154 DISTANT LINK BETWEEN ENSGT00690000102225 #157 AND ENSGT00910000144347.x #155 SYNTENIC BLOCK FROM ENSGT00910000144347.x #7 TO ENSGT00940000155425 #9 ADJACENCY BETWEEN ENSGT00940000155425 #9 AND ENSGT00950000182772.B.a.b #12 SYNTENIC BLOCK FROM ENSGT00950000182772.B.a.b #12 TO ENSGT00390000000491 #27 DISTANT LINK BETWEEN ENSGT00390000000491 #177 AND ENSGT00390000004927.f #175 >> CHROMOSOME 18 [REVERSED] > Guinea pig [MODERNSPECIES] >> CHROMOSOME 10 SYNTENIC BLOCK FROM CTDSPL2 (ENSCPOG00000024099) #0 TO WDR76 (ENSCPOG00000002178) #3 [REVERSED] DISTANT LINK BETWEEN WDR76 (ENSCPOG00000002178) #349 AND HYPK (ENSCPOG00000002173) #351 [REVERSED] [REVERSED] DISTANT LINK BETWEEN MFAP1 (ENSCPOG00000033061) #348 AND ENSCPOG00000031483 #350 SYNTENIC BLOCK FROM ENSCPOG00000031483 #7 TO PDIA3 (ENSCPOG00000008187) #9 [REVERSED] ADJACENCY BETWEEN PDIA3 (ENSCPOG00000008187) #9 AND ENSCPOG00000001794 #12 SYNTENIC BLOCK FROM ENSCPOG00000001794 #12 TO MAP1A (ENSCPOG00000000886) #14 [REVERSED] DISTANT LINK BETWEEN MAP1A (ENSCPOG00000000886) #341 AND ENSCPOG00000001787 #343 [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSCPOG00000024235 #340 AND TUBGCP4 (ENSCPOG00000001784) #342 SYNTENIC BLOCK FROM TUBGCP4 (ENSCPOG00000001784) #16 TO CDAN1 (ENSCPOG00000013195) #27 [REVERSED] DISTANT LINK BETWEEN CDAN1 (ENSCPOG00000013195) #327 AND HAUS2 (ENSCPOG00000030527) #329 [REVERSED] > Hystricomorpha_b [ANCESTRALSPECIES] >> CHROMOSOME 18 [REVERSED] >> CHROMOSOME 20 SYNTENIC BLOCK FROM ENSGT01040000240503.A.a.a #0 TO ENSGT00510000048144 #3 [REVERSED] DISTANT LINK BETWEEN ENSGT00510000048144 #108 AND ENSGT00390000008502 #110 [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSGT00690000102225 #107 AND ENSGT00910000144347.x #109 [REVERSED] DISTANT LINK BETWEEN ENSGT00910000144347.x #105 AND ENSGT00940000161615 #107 SYNTENIC BLOCK FROM ENSGT00940000161615 #8 TO ENSGT00940000155425 #9 [REVERSED] ADJACENCY BETWEEN ENSGT00940000155425 #9 AND ENSGT00950000182772.B.a.b #12 SYNTENIC BLOCK FROM ENSGT00950000182772.B.a.b #12 TO ENSGT00390000000491 #27 [REVERSED] DISTANT LINK BETWEEN ENSGT00390000000491 #86 AND ENSGT00390000004927.f #88 [REVERSED] > Degu [MODERNSPECIES] >> CHROMOSOME 43 DISTANT LINK BETWEEN CTDSPL2 (ENSODEG00000016569) #147 AND GOLM2 (ENSODEG00000016663) #145 DISTANT LINK BETWEEN GOLM2 (ENSODEG00000016663) #150 AND FRMD5 (ENSODEG00000016269) #147 DISTANT LINK BETWEEN FRMD5 (ENSODEG00000016269) #153 AND HYPK (ENSODEG00000016700) #150 DISTANT LINK BETWEEN MFAP1 (ENSODEG00000016397) #154 AND ENSODEG00000016295 #152 ADJACENCY BETWEEN ENSODEG00000016295 #7 AND PDIA3 (ENSODEG00000016212) #9 ADJACENCY BETWEEN PDIA3 (ENSODEG00000016212) #9 AND ENSODEG00000016390 #12 SYNTENIC BLOCK FROM ENSODEG00000016390 #12 TO ADAL (ENSODEG00000016433) #18 ADJACENCY BETWEEN ADAL (ENSODEG00000016433) #18 AND TGM7 (ENSODEG00000016365) #20 SYNTENIC BLOCK FROM TGM7 (ENSODEG00000016365) #20 TO TGM5 (ENSODEG00000016333) #21 ADJACENCY BETWEEN TGM5 (ENSODEG00000016333) #21 AND ENSODEG00000017025 #23 SYNTENIC BLOCK FROM ENSODEG00000017025 #23 TO CDAN1 (ENSODEG00000016883) #27 > Long-tailed chinchilla [MODERNSPECIES] >> CHROMOSOME 116 [REVERSED] >> CHROMOSOME 123 SYNTENIC BLOCK FROM ENSCLAG00000013359 #0 TO WDR76 (ENSCLAG00000010272) #3 [REVERSED] DISTANT LINK BETWEEN WDR76 (ENSCLAG00000010272) #112 AND HYPK (ENSCLAG00000007549) #114 [REVERSED] [REVERSED] DISTANT LINK BETWEEN MFAP1 (ENSCLAG00000010732) #110 AND ELL3 (ENSCLAG00000008218) #113 SYNTENIC BLOCK FROM ELL3 (ENSCLAG00000008218) #8 TO PDIA3 (ENSCLAG00000007127) #9 [REVERSED] ADJACENCY BETWEEN PDIA3 (ENSCLAG00000007127) #9 AND ENSCLAG00000016160 #12 SYNTENIC BLOCK FROM ENSCLAG00000016160 #12 TO CDAN1 (ENSCLAG00000012859) #27 [REVERSED] DISTANT LINK BETWEEN CDAN1 (ENSCLAG00000012859) #91 AND HAUS2 (ENSCLAG00000011815) #93 [REVERSED] > Naked mole-rat female [MODERNSPECIES] >> CHROMOSOME 1 [REVERSED] >> CHROMOSOME 9 [REVERSED] [REVERSED] >> CHROMOSOME 25 DISTANT LINK BETWEEN ENSHGLG00000046905 #425 AND ENSHGLG00000035600 #449 [REVERSED] >> CHROMOSOME 11 SYNTENIC BLOCK FROM ENSHGLG00000014890 #0 TO CASC4 (ENSHGLG00000011095) #1 [REVERSED] DISTANT LINK BETWEEN CASC4 (ENSHGLG00000011095) #491 AND ENSHGLG00000014701 #208 DISTANT LINK BETWEEN ENSHGLG00000014701 #378 AND ENSHGLG00000001684 #491 [REVERSED] DISTANT LINK BETWEEN ENSHGLG00000001684 #641 AND ENSHGLG00000003651 #378 DISTANT LINK BETWEEN ENSHGLG00000003651 #203 AND ENSHGLG00000015852 #641 SYNTENIC BLOCK FROM ENSHGLG00000015852 #22 TO UBR1 (ENSHGLG00000008216) #25 DISTANT LINK BETWEEN UBR1 (ENSHGLG00000008216) #198 AND TTBK2 (ENSHGLG00000008689) #200 SYNTENIC BLOCK FROM TTBK2 (ENSHGLG00000008689) #26 TO CDAN1 (ENSHGLG00000015508) #27 DISTANT LINK BETWEEN CDAN1 (ENSHGLG00000015508) #195 AND ENSHGLG00000018433 #197 >> CHROMOSOME 30 [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSHGLG00000037354 #28 AND WDR76 (ENSHGLG00000006513) #30 [REVERSED] DISTANT LINK BETWEEN WDR76 (ENSHGLG00000006513) #26 AND ENSHGLG00000049634 #28 [REVERSED] [REVERSED] DISTANT LINK BETWEEN MFAP1 (ENSHGLG00000007753) #23 AND ELL3 (ENSHGLG00000008994) #27 SYNTENIC BLOCK FROM ELL3 (ENSHGLG00000008994) #8 TO ENSHGLG00000007015 #9 [REVERSED] ADJACENCY BETWEEN ENSHGLG00000007015 #9 AND ENSHGLG00000018662 #12 SYNTENIC BLOCK FROM ENSHGLG00000018662 #12 TO ENSHGLG00000014547 #16 [REVERSED] DISTANT LINK BETWEEN ENSHGLG00000014547 #15 AND ZSCAN29 (ENSHGLG00000012145) #17 SYNTENIC BLOCK FROM ZSCAN29 (ENSHGLG00000012145) #17 TO LCMT2 (ENSHGLG00000021255) #19 [REVERSED] DISTANT LINK BETWEEN LCMT2 (ENSHGLG00000021255) #11 AND ENSHGLG00000013743 #13 SYNTENIC BLOCK FROM ENSHGLG00000013743 #20 TO ENSHGLG00000016329 #21 [REVERSED] >> CHROMOSOME 23 DISTANT LINK BETWEEN ENSHGLG00000020828 #68 AND HINT1 (ENSHGLG00000035928) #686