> Rodentia [ANCESTRALSPECIES] >> CHROMOSOME 9 [REVERSED] DISTANT LINK BETWEEN ENSGT00950000183161.a.b #140 AND ENSGT00940000158049 #142 SYNTENIC BLOCK FROM ENSGT00940000158049 #1 TO ENSGT01020000230412.A.c.a #2 [REVERSED] DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #137 AND ENSGT00940000156235 #139 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 [REVERSED] > Rodentia_A [ANCESTRALSPECIES] >> CHROMOSOME 11 DISTANT LINK BETWEEN ENSGT00950000183161.a.b #536 AND ENSGT00940000158049 #534 SYNTENIC BLOCK FROM ENSGT00940000158049 #1 TO ENSGT01020000230412.A.c.a #2 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #539 AND ENSGT00940000156235 #537 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Sciuridae [ANCESTRALSPECIES] >> CHROMOSOME 6 SYNTENIC BLOCK FROM ENSGT00950000183161.a.b #0 TO ENSGT01020000230412.A.c.a #2 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #539 AND ENSGT00940000156235 #537 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Marmotini [ANCESTRALSPECIES] >> CHROMOSOME 1 SYNTENIC BLOCK FROM ENSGT00950000183161.a.b #0 TO ENSGT00950000182858.A.b.b #19 > Marmotini_b [ANCESTRALSPECIES] >> CHROMOSOME 2 SYNTENIC BLOCK FROM ENSGT00950000183161.a.b #0 TO ENSGT00950000182858.A.b.b #19 [REVERSED] > Squirrel [REFERENCESPECIES] >> CHROMOSOME 87 SYNTENIC BLOCK FROM PRRC2B (ENSSTOG00000024364) #0 TO GBGT1 (ENSSTOG00000033831) #19 > Arctic ground squirrel [MODERNSPECIES] >> CHROMOSOME 44 SYNTENIC BLOCK FROM PRRC2B (ENSUPAG00010019495) #0 TO RAPGEF1 (ENSUPAG00010023174) #3 >> CHROMOSOME 156 SYNTENIC BLOCK FROM MED27 (ENSUPAG00010011579) #4 TO GBGT1 (ENSUPAG00010009274) #19 [REVERSED] > Alpin marmot [MODERNSPECIES] >> CHROMOSOME 47 SYNTENIC BLOCK FROM PRRC2B (ENSMMMG00000011717) #0 TO BARHL1 (ENSMMMG00000011083) #9 [REVERSED] DISTANT LINK BETWEEN BARHL1 (ENSMMMG00000011083) #9 AND GTF3C4 (ENSMMMG00000011057) #11 SYNTENIC BLOCK FROM GTF3C4 (ENSMMMG00000011057) #11 TO GBGT1 (ENSMMMG00000010723) #19 [REVERSED] > Eurasian red squirrel [MODERNSPECIES] >> CHROMOSOME 6 SYNTENIC BLOCK FROM PRRC2B (ENSSVLG00005025635) #0 TO UCK1 (ENSSVLG00005016660) #2 DISTANT LINK BETWEEN UCK1 (ENSSVLG00005016660) #644 AND RAPGEF1 (ENSSVLG00005016872) #642 SYNTENIC BLOCK FROM RAPGEF1 (ENSSVLG00005016872) #3 TO MED27 (ENSSVLG00005017453) #4 DISTANT LINK BETWEEN MED27 (ENSSVLG00005017453) #647 AND NTNG2 (ENSSVLG00005017637) #645 SYNTENIC BLOCK FROM NTNG2 (ENSSVLG00005017637) #5 TO GBGT1 (ENSSVLG00005020564) #19 > Hystricomorpha [ANCESTRALSPECIES] >> CHROMOSOME 7 DISTANT LINK BETWEEN ENSGT00950000183161.a.b #404 AND ENSGT00940000158049 #402 SYNTENIC BLOCK FROM ENSGT00940000158049 #1 TO ENSGT01020000230412.A.c.a #2 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #407 AND ENSGT00940000156235 #405 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Hystricomorpha_a [ANCESTRALSPECIES] >> CHROMOSOME 5 SYNTENIC BLOCK FROM ENSGT00950000183161.a.b #0 TO ENSGT01020000230412.A.c.a #2 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #397 AND ENSGT00940000156235 #395 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Guinea pig [MODERNSPECIES] >> CHROMOSOME 27 SYNTENIC BLOCK FROM PRRC2B (ENSCPOG00000009890) #0 TO UCK1 (ENSCPOG00000038192) #2 [REVERSED] DISTANT LINK BETWEEN UCK1 (ENSCPOG00000038192) #22 AND RAPGEF1 (ENSCPOG00000009942) #24 SYNTENIC BLOCK FROM RAPGEF1 (ENSCPOG00000009942) #3 TO GBGT1 (ENSCPOG00000040276) #19 [REVERSED] > Hystricomorpha_b [ANCESTRALSPECIES] >> CHROMOSOME 36 SYNTENIC BLOCK FROM ENSGT00950000183161.a.b #0 TO ENSGT01020000230412.A.c.a #2 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #61 AND ENSGT00940000156235 #59 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Degu [MODERNSPECIES] >> CHROMOSOME 164 SYNTENIC BLOCK FROM PRRC2B (ENSODEG00000016621) #0 TO ENSODEG00000016290 #2 [REVERSED] DISTANT LINK BETWEEN ENSODEG00000016290 #118 AND RAPGEF1 (ENSODEG00000015868) #120 SYNTENIC BLOCK FROM RAPGEF1 (ENSODEG00000015868) #3 TO NTNG2 (ENSODEG00000015897) #5 [REVERSED] DISTANT LINK BETWEEN NTNG2 (ENSODEG00000015897) #114 AND ENSODEG00000016387 #116 [REVERSED] DISTANT LINK BETWEEN ENSODEG00000016387 #112 AND CFAP77 (ENSODEG00000016491) #114 SYNTENIC BLOCK FROM CFAP77 (ENSODEG00000016491) #8 TO ENSODEG00000015962 #17 [REVERSED] DISTANT LINK BETWEEN ENSODEG00000015962 #101 AND GBGT1 (ENSODEG00000015844) #103 [REVERSED] > Long-tailed chinchilla [MODERNSPECIES] >> CHROMOSOME 220 SYNTENIC BLOCK FROM PRRC2B (ENSCLAG00000006317) #0 TO GBGT1 (ENSCLAG00000005202) #19 > Naked mole-rat female [MODERNSPECIES] >> CHROMOSOME 3 [REVERSED] DISTANT LINK BETWEEN PRRC2B (ENSHGLG00000010565) #112 AND POMT1 (ENSHGLG00000016861) #114 SYNTENIC BLOCK FROM POMT1 (ENSHGLG00000016861) #1 TO UCK1 (ENSHGLG00000014736) #2 [REVERSED] DISTANT LINK BETWEEN UCK1 (ENSHGLG00000014736) #109 AND RAPGEF1 (ENSHGLG00000012902) #111 SYNTENIC BLOCK FROM RAPGEF1 (ENSHGLG00000012902) #3 TO GTF3C5 (ENSHGLG00000011110) #16 [REVERSED] DISTANT LINK BETWEEN GTF3C5 (ENSHGLG00000011110) #94 AND ENSHGLG00000014091 #96 [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSHGLG00000042543 #93 AND ENSHGLG00000012657 #95 [REVERSED] > Rodentia_B [ANCESTRALSPECIES] >> CHROMOSOME 6 SYNTENIC BLOCK FROM ENSGT00950000183161.a.b #0 TO ENSGT01020000230412.A.c.a #2 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #554 AND ENSGT00940000156235 #552 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Myomorpha [ANCESTRALSPECIES] >> CHROMOSOME 1 SYNTENIC BLOCK FROM ENSGT00950000183161.a.b #0 TO ENSGT01020000230412.A.c.a #2 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #874 AND ENSGT00940000156235 #872 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Muroidea [ANCESTRALSPECIES] >> CHROMOSOME 1 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #881 AND ENSGT00940000156235 #823 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Upper Galilee mountains blind mole rat [MODERNSPECIES] >> CHROMOSOME 513 SYNTENIC BLOCK FROM Prrc2b (ENSNGAG00000000491) #0 TO Uck1 (ENSNGAG00000016330) #2 [REVERSED] >> CHROMOSOME 1249 SYNTENIC BLOCK FROM Rapgef1 (ENSNGAG00000015271) #3 TO Ntng2 (ENSNGAG00000000374) #5 [REVERSED] DISTANT LINK BETWEEN Ntng2 (ENSNGAG00000000374) #34 AND Cfap77 (ENSNGAG00000012081) #36 SYNTENIC BLOCK FROM Cfap77 (ENSNGAG00000012081) #8 TO Ralgds (ENSNGAG00000019107) #18 [REVERSED] > Muroidea_A [ANCESTRALSPECIES] >> CHROMOSOME 2 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #162 AND ENSGT00940000156235 #104 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Murinae [ANCESTRALSPECIES] >> CHROMOSOME 1 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #1453 AND ENSGT00940000156235 #1395 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Rat [MODERNSPECIES] >> CHROMOSOME 13 [REVERSED] [REVERSED] [REVERSED] DISTANT LINK BETWEEN Uck1 (ENSRNOG00000011467) #172 AND Rapgef1 (ENSRNOG00000014316) #230 SYNTENIC BLOCK FROM Rapgef1 (ENSRNOG00000014316) #3 TO Ralgds (ENSRNOG00000010219) #18 [REVERSED] > Mus [ANCESTRALSPECIES] >> CHROMOSOME 1 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #1473 AND ENSGT00940000156235 #1413 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Shrew mouse [MODERNSPECIES] >> CHROMOSOME 16 [REVERSED] [REVERSED] [REVERSED] DISTANT LINK BETWEEN Uck1 (MGP_PahariEiJ_G0024883) #185 AND Rapgef1 (MGP_PahariEiJ_G0024824) #244 SYNTENIC BLOCK FROM Rapgef1 (MGP_PahariEiJ_G0024824) #3 TO Gbgt1 (MGP_PahariEiJ_G0024808) #19 [REVERSED] > Mus_A [ANCESTRALSPECIES] >> CHROMOSOME 0 [REVERSED] [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #242 AND ENSGT00940000156235 #302 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 [REVERSED] > Ryukyu mouse [MODERNSPECIES] >> CHROMOSOME 11 [REVERSED] [REVERSED] [REVERSED] DISTANT LINK BETWEEN Uck1 (MGP_CAROLIEiJ_G0023426) #236 AND Rapgef1 (MGP_CAROLIEiJ_G0023367) #295 SYNTENIC BLOCK FROM Rapgef1 (MGP_CAROLIEiJ_G0023367) #3 TO Gbgt1 (MGP_CAROLIEiJ_G0023351) #19 [REVERSED] > Mus_B [ANCESTRALSPECIES] >> CHROMOSOME 1 [REVERSED] [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #241 AND ENSGT00940000156235 #300 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 [REVERSED] > Mus_C [ANCESTRALSPECIES] >> CHROMOSOME 0 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #1348 AND ENSGT00940000156235 #1289 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > spretus [MODERNSPECIES] >> CHROMOSOME 11 [REVERSED] [REVERSED] [REVERSED] DISTANT LINK BETWEEN Uck1 (MGP_SPRETEiJ_G0024343) #234 AND Rapgef1 (MGP_SPRETEiJ_G0024284) #293 SYNTENIC BLOCK FROM Rapgef1 (MGP_SPRETEiJ_G0024284) #3 TO Gbgt1 (MGP_SPRETEiJ_G0024268) #19 [REVERSED] > Steppe mouse [MODERNSPECIES] >> CHROMOSOME 2944 SYNTENIC BLOCK FROM Rapgef1 (ENSMSIG00000009443) #3 TO Cfap77 (ENSMSIG00000010110) #8 >> CHROMOSOME 3038 SYNTENIC BLOCK FROM ENSMSIG00000020831 #9 TO Gbgt1 (ENSMSIG00000020208) #19 [REVERSED] >> CHROMOSOME 2816 SYNTENIC BLOCK FROM Prrc2b (ENSMSIG00000012975) #0 TO Uck1 (ENSMSIG00000012898) #2 [REVERSED] > Mouse [MODERNSPECIES] >> CHROMOSOME 11 [REVERSED] [REVERSED] [REVERSED] DISTANT LINK BETWEEN Uck1 (ENSMUSG00000002550) #239 AND Rapgef1 (ENSMUSG00000039844) #297 SYNTENIC BLOCK FROM Rapgef1 (ENSMUSG00000039844) #3 TO Gbgt1 (ENSMUSG00000026829) #19 [REVERSED] > Cricetidae [ANCESTRALSPECIES] >> CHROMOSOME 12 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #162 AND ENSGT00940000156235 #104 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Cricetidae_B [ANCESTRALSPECIES] >> CHROMOSOME 7 DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #160 AND ENSGT00940000156235 #102 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 > Northern American deer mouse [MODERNSPECIES] >> CHROMOSOME 17 DISTANT LINK BETWEEN Uck1 (ENSPEMG00000008608) #162 AND Rapgef1 (ENSPEMG00000016265) #102 SYNTENIC BLOCK FROM Rapgef1 (ENSPEMG00000016265) #3 TO Cfap77 (ENSPEMG00000013789) #8 DISTANT LINK BETWEEN Cfap77 (ENSPEMG00000013789) #169 AND Barhl1 (ENSPEMG00000026128) #167 SYNTENIC BLOCK FROM Barhl1 (ENSPEMG00000026128) #9 TO Gbgt1 (ENSPEMG00000009964) #19 > Prairie vole [MODERNSPECIES] >> CHROMOSOME 12 DISTANT LINK BETWEEN Uck1 (ENSMOCG00000021975) #539 AND Rapgef1 (ENSMOCG00000003434) #480 DISTANT LINK BETWEEN Rapgef1 (ENSMOCG00000003434) #541 AND Med27 (ENSMOCG00000001125) #539 SYNTENIC BLOCK FROM Med27 (ENSMOCG00000001125) #4 TO Gbgt1 (ENSMOCG00000014087) #19 > Cricetinae [ANCESTRALSPECIES] >> CHROMOSOME 1 [REVERSED] [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSGT01020000230412.A.c.a #1378 AND ENSGT00940000156235 #1435 SYNTENIC BLOCK FROM ENSGT00940000156235 #3 TO ENSGT00950000182858.A.b.b #19 [REVERSED] > Chinese hamster chok1gshd [MODERNSPECIES] >> CHROMOSOME 188 [REVERSED] [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSCGRG00001004922 #1199 AND Rapgef1 (ENSCGRG00001020836) #1259 SYNTENIC BLOCK FROM Rapgef1 (ENSCGRG00001020836) #3 TO Gtf3c4 (ENSCGRG00001012779) #11 [REVERSED] DISTANT LINK BETWEEN Gtf3c4 (ENSCGRG00001012779) #1189 AND Ak8 (ENSCGRG00001016050) #1191 SYNTENIC BLOCK FROM Ak8 (ENSCGRG00001016050) #12 TO Gbgt1 (ENSCGRG00001024653) #19 [REVERSED] > Golden Hamster [MODERNSPECIES] >> CHROMOSOME 809 SYNTENIC BLOCK FROM Rapgef1 (ENSMAUG00000012266) #3 TO ENSMAUG00000015488 #4 [REVERSED] >> CHROMOSOME 807 SYNTENIC BLOCK FROM Ntng2 (ENSMAUG00000020166) #5 TO Gbgt1 (ENSMAUG00000011657) #19 [REVERSED] >> CHROMOSOME 906 SYNTENIC BLOCK FROM Prrc2b (ENSMAUG00000010542) #0 TO Uck1 (ENSMAUG00000005913) #2 > Lesser Egyptian jerboa [MODERNSPECIES] >> CHROMOSOME 53 SYNTENIC BLOCK FROM ENSJJAG00000009295 #0 TO Uck1 (ENSJJAG00000020985) #2 DISTANT LINK BETWEEN Uck1 (ENSJJAG00000020985) #100 AND Rapgef1 (ENSJJAG00000017691) #98 SYNTENIC BLOCK FROM Rapgef1 (ENSJJAG00000017691) #3 TO Ntng2 (ENSJJAG00000018991) #5 DISTANT LINK BETWEEN Ntng2 (ENSJJAG00000018991) #104 AND ENSJJAG00000018182 #102 DISTANT LINK BETWEEN ENSJJAG00000018182 #106 AND Cfap77 (ENSJJAG00000012589) #104 SYNTENIC BLOCK FROM Cfap77 (ENSJJAG00000012589) #8 TO Gbgt1 (ENSJJAG00000023443) #19 > Kangaroo rat [MODERNSPECIES] >> CHROMOSOME 374 SYNTENIC BLOCK FROM Prrc2b (ENSDORG00000005945) #0 TO Ntng2 (ENSDORG00000015371) #5 DISTANT LINK BETWEEN Ntng2 (ENSDORG00000015371) #121 AND Cfap77 (ENSDORG00000008723) #119 SYNTENIC BLOCK FROM Cfap77 (ENSDORG00000008723) #8 TO Gbgt1 (ENSDORG00000011384) #19