> Rodentia_A [ANCESTRALSPECIES] >> CHROMOSOME 18 ADJACENCY BETWEEN ENSGT01090000260093.a #0 AND ENSGT00950000182978.A.a.b.a #2 ADJACENCY BETWEEN ENSGT00950000182978.A.a.b.a #2 AND ENSGT00940000160438 #4 SYNTENIC BLOCK FROM ENSGT00940000160438 #4 TO ENSGT00940000161902.a.a #6 ADJACENCY BETWEEN ENSGT00940000161902.a.a #6 AND ENSGT00940000155268 #8 SYNTENIC BLOCK FROM ENSGT00940000155268 #8 TO ENSGT00390000008325.b.b #9 DISTANT LINK BETWEEN ENSGT00390000008325.b.b #89 AND ENSGT00950000182878.b.a.c.a.b #87 SYNTENIC BLOCK FROM ENSGT00950000182878.b.a.c.a.b #10 TO ENSGT00940000157063 #11 DISTANT LINK BETWEEN ENSGT00940000157063 #92 AND ENSGT00940000154977 #90 DISTANT LINK BETWEEN ENSGT00940000154977 #94 AND ENSGT00940000156908 #92 SYNTENIC BLOCK FROM ENSGT00940000156908 #13 TO ENSGT00940000156473 #20 ADJACENCY BETWEEN ENSGT00940000156473 #20 AND ENSGT00940000158224 #24 ADJACENCY BETWEEN ENSGT00940000158224 #24 AND ENSGT00940000159542 #26 DISTANT LINK BETWEEN ENSGT00940000159542 #105 AND ENSGT00390000001846 #103 > Hystricomorpha [ANCESTRALSPECIES] >> CHROMOSOME 12 ADJACENCY BETWEEN ENSGT01090000260093.a #0 AND ENSGT00950000182978.A.a.b.a #2 ADJACENCY BETWEEN ENSGT00950000182978.A.a.b.a #2 AND ENSGT00940000160438 #4 SYNTENIC BLOCK FROM ENSGT00940000160438 #4 TO ENSGT00940000161902.a.a #6 ADJACENCY BETWEEN ENSGT00940000161902.a.a #6 AND ENSGT00940000155268 #8 SYNTENIC BLOCK FROM ENSGT00940000155268 #8 TO ENSGT00390000008325.b.b #9 DISTANT LINK BETWEEN ENSGT00390000008325.b.b #266 AND ENSGT00950000182878.b.a.c.a.b #264 SYNTENIC BLOCK FROM ENSGT00950000182878.b.a.c.a.b #10 TO ENSGT00940000156473 #20 ADJACENCY BETWEEN ENSGT00940000156473 #20 AND ENSGT00940000158224 #24 ADJACENCY BETWEEN ENSGT00940000158224 #24 AND ENSGT00940000159542 #26 ADJACENCY BETWEEN ENSGT00940000159542 #26 AND ENSGT00390000001846 #28 > Naked mole-rat female [REFERENCESPECIES] >> CHROMOSOME 13 SYNTENIC BLOCK FROM XKR9 (ENSHGLG00000033679) #0 TO ENSHGLG00000009819 #30 > Hystricomorpha_a [ANCESTRALSPECIES] >> CHROMOSOME 9 [REVERSED] ADJACENCY BETWEEN ENSGT01090000260093.a #0 AND ENSGT00950000182978.A.a.b.a #2 [REVERSED] ADJACENCY BETWEEN ENSGT00950000182978.A.a.b.a #2 AND ENSGT00940000160438 #4 SYNTENIC BLOCK FROM ENSGT00940000160438 #4 TO ENSGT00940000161902.a.a #6 [REVERSED] ADJACENCY BETWEEN ENSGT00940000161902.a.a #6 AND ENSGT00940000155268 #8 SYNTENIC BLOCK FROM ENSGT00940000155268 #8 TO ENSGT00390000008325.b.b #9 [REVERSED] DISTANT LINK BETWEEN ENSGT00390000008325.b.b #164 AND ENSGT00950000182878.b.a.c.a.b.n #166 SYNTENIC BLOCK FROM ENSGT00950000182878.b.a.c.a.b.n #10 TO ENSGT00940000156473 #20 [REVERSED] ADJACENCY BETWEEN ENSGT00940000156473 #20 AND ENSGT00940000158224 #24 [REVERSED] ADJACENCY BETWEEN ENSGT00940000158224 #24 AND ENSGT00940000159542 #26 [REVERSED] ADJACENCY BETWEEN ENSGT00940000159542 #26 AND ENSGT00390000001846 #28 [REVERSED] > Guinea pig [MODERNSPECIES] >> CHROMOSOME 0 [REVERSED] ADJACENCY BETWEEN EYA1 (ENSCPOG00000000714) #2 AND MSC (ENSCPOG00000038612) #4 SYNTENIC BLOCK FROM MSC (ENSCPOG00000038612) #4 TO KCNB2 (ENSCPOG00000000689) #6 [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSCPOG00000020230 #165 AND TERF1 (ENSCPOG00000009638) #311 SYNTENIC BLOCK FROM TERF1 (ENSCPOG00000009638) #8 TO SBSPON (ENSCPOG00000010933) #9 [REVERSED] DISTANT LINK BETWEEN SBSPON (ENSCPOG00000010933) #162 AND RPL7 (ENSCPOG00000004140) #164 SYNTENIC BLOCK FROM RPL7 (ENSCPOG00000004140) #10 TO CRISPLD1 (ENSCPOG00000002867) #20 [REVERSED] ADJACENCY BETWEEN CRISPLD1 (ENSCPOG00000002867) #20 AND HNF4G (ENSCPOG00000011625) #24 [REVERSED] ADJACENCY BETWEEN HNF4G (ENSCPOG00000011625) #24 AND ZFHX4 (ENSCPOG00000012693) #26 [REVERSED] ADJACENCY BETWEEN ZFHX4 (ENSCPOG00000012693) #26 AND PEX2 (ENSCPOG00000034224) #28 [REVERSED] > Hystricomorpha_b [ANCESTRALSPECIES] >> CHROMOSOME 25 [REVERSED] ADJACENCY BETWEEN ENSGT01090000260093.a #0 AND ENSGT00950000182978.A.a.b.a #2 [REVERSED] ADJACENCY BETWEEN ENSGT00950000182978.A.a.b.a #2 AND ENSGT00940000160438 #4 SYNTENIC BLOCK FROM ENSGT00940000160438 #4 TO ENSGT00940000156118 #5 [REVERSED] DISTANT LINK BETWEEN ENSGT00940000156118 #166 AND ENSGT00940000161902.a.a #168 [REVERSED] ADJACENCY BETWEEN ENSGT00940000161902.a.a #6 AND ENSGT00940000155268 #8 SYNTENIC BLOCK FROM ENSGT00940000155268 #8 TO ENSGT00390000008325.b.b #9 [REVERSED] DISTANT LINK BETWEEN ENSGT00390000008325.b.b #162 AND ENSGT00950000182878.b.a.c.a.b.n #164 SYNTENIC BLOCK FROM ENSGT00950000182878.b.a.c.a.b.n #10 TO ENSGT00940000156473 #20 [REVERSED] ADJACENCY BETWEEN ENSGT00940000156473 #20 AND ENSGT00940000158224 #24 [REVERSED] ADJACENCY BETWEEN ENSGT00940000158224 #24 AND ENSGT00940000159542 #26 [REVERSED] ADJACENCY BETWEEN ENSGT00940000159542 #26 AND ENSGT00390000001846 #28 [REVERSED] > Degu [MODERNSPECIES] >> CHROMOSOME 132 DISTANT LINK BETWEEN XKR9 (ENSODEG00000003655) #41 AND EYA1 (ENSODEG00000003994) #37 ADJACENCY BETWEEN EYA1 (ENSODEG00000003994) #2 AND MSC (ENSODEG00000004396) #4 SYNTENIC BLOCK FROM MSC (ENSODEG00000004396) #4 TO KCNB2 (ENSODEG00000004106) #6 DISTANT LINK BETWEEN KCNB2 (ENSODEG00000004106) #46 AND ENSODEG00000004166 #44 DISTANT LINK BETWEEN ENSODEG00000004166 #48 AND SBSPON (ENSODEG00000004392) #46 DISTANT LINK BETWEEN SBSPON (ENSODEG00000004392) #50 AND ENSODEG00000004457 #48 SYNTENIC BLOCK FROM ENSODEG00000004457 #10 TO GDAP1 (ENSODEG00000003006) #18 DISTANT LINK BETWEEN GDAP1 (ENSODEG00000003006) #60 AND PI15 (ENSODEG00000003073) #58 SYNTENIC BLOCK FROM PI15 (ENSODEG00000003073) #19 TO CRISPLD1 (ENSODEG00000003148) #20 >> CHROMOSOME 49 [REVERSED] DISTANT LINK BETWEEN ENSODEG00000018283 #97 AND THUMPD3 (ENSODEG00000018242) #241 [REVERSED] >> CHROMOSOME 73 [REVERSED] >> CHROMOSOME 293 [REVERSED] ADJACENCY BETWEEN HNF4G (ENSODEG00000001340) #24 AND ZFHX4 (ENSODEG00000001283) #26 [REVERSED] ADJACENCY BETWEEN ZFHX4 (ENSODEG00000001283) #26 AND PEX2 (ENSODEG00000001213) #28 [REVERSED] > Long-tailed chinchilla [MODERNSPECIES] >> CHROMOSOME 151 [REVERSED] ADJACENCY BETWEEN XKR9 (ENSCLAG00000004198) #0 AND EYA1 (ENSCLAG00000003062) #2 [REVERSED] ADJACENCY BETWEEN EYA1 (ENSCLAG00000003062) #2 AND MSC (ENSCLAG00000002927) #4 SYNTENIC BLOCK FROM MSC (ENSCLAG00000002927) #4 TO TRPA1 (ENSCLAG00000002418) #5 [REVERSED] DISTANT LINK BETWEEN TRPA1 (ENSCLAG00000002418) #32 AND TERF1 (ENSCLAG00000002076) #34 SYNTENIC BLOCK FROM TERF1 (ENSCLAG00000002076) #8 TO SBSPON (ENSCLAG00000002049) #9 [REVERSED] DISTANT LINK BETWEEN SBSPON (ENSCLAG00000002049) #29 AND ENSCLAG00000002143 #31 SYNTENIC BLOCK FROM ENSCLAG00000002143 #10 TO CRISPLD1 (ENSCLAG00000002069) #20 [REVERSED] ADJACENCY BETWEEN CRISPLD1 (ENSCLAG00000002069) #20 AND HNF4G (ENSCLAG00000013756) #24 [REVERSED] ADJACENCY BETWEEN HNF4G (ENSCLAG00000013756) #24 AND ZFHX4 (ENSCLAG00000011659) #26 [REVERSED] ADJACENCY BETWEEN ZFHX4 (ENSCLAG00000011659) #26 AND PEX2 (ENSCLAG00000010766) #28 [REVERSED] > Sciuridae [ANCESTRALSPECIES] >> CHROMOSOME 17 [REVERSED] ADJACENCY BETWEEN ENSGT01090000260093.a #0 AND ENSGT00950000182978.A.a.b.a #2 [REVERSED] ADJACENCY BETWEEN ENSGT00950000182978.A.a.b.a #2 AND ENSGT00940000160438 #4 SYNTENIC BLOCK FROM ENSGT00940000160438 #4 TO ENSGT00940000161902.a.a #6 [REVERSED] ADJACENCY BETWEEN ENSGT00940000161902.a.a #6 AND ENSGT00940000155268 #8 SYNTENIC BLOCK FROM ENSGT00940000155268 #8 TO ENSGT00390000008325.b.b #9 [REVERSED] DISTANT LINK BETWEEN ENSGT00390000008325.b.b #325 AND ENSGT00950000182878.b.a.c.a.b.o.a #327 SYNTENIC BLOCK FROM ENSGT00950000182878.b.a.c.a.b.o.a #10 TO ENSGT00940000157063 #11 [REVERSED] DISTANT LINK BETWEEN ENSGT00940000157063 #322 AND ENSGT00940000154977 #324 [REVERSED] DISTANT LINK BETWEEN ENSGT00940000154977 #320 AND ENSGT00940000156908 #322 SYNTENIC BLOCK FROM ENSGT00940000156908 #13 TO ENSGT00940000156473 #20 [REVERSED] ADJACENCY BETWEEN ENSGT00940000156473 #20 AND ENSGT00940000158224 #24 [REVERSED] ADJACENCY BETWEEN ENSGT00940000158224 #24 AND ENSGT00940000159542 #26 [REVERSED] DISTANT LINK BETWEEN ENSGT00940000159542 #309 AND ENSGT00390000001846 #311 [REVERSED] > Eurasian red squirrel [MODERNSPECIES] >> CHROMOSOME 5 [REVERSED] DISTANT LINK BETWEEN ENSSVLG00005022466 #441 AND CCT4 (ENSSVLG00005022942) #688 [REVERSED] >> CHROMOSOME 12 DISTANT LINK BETWEEN ENSSVLG00005021268 #1502 AND ENSSVLG00005000178 #1063 >> CHROMOSOME 0 ADJACENCY BETWEEN XKR9 (ENSSVLG00005001398) #0 AND EYA1 (ENSSVLG00005001545) #2 ADJACENCY BETWEEN EYA1 (ENSSVLG00005001545) #2 AND MSC (ENSSVLG00005001842) #4 SYNTENIC BLOCK FROM MSC (ENSSVLG00005001842) #4 TO KCNB2 (ENSSVLG00005001924) #6 ADJACENCY BETWEEN KCNB2 (ENSSVLG00005001924) #6 AND TERF1 (ENSSVLG00005001939) #8 SYNTENIC BLOCK FROM TERF1 (ENSSVLG00005001939) #8 TO SBSPON (ENSSVLG00005001957) #9 DISTANT LINK BETWEEN SBSPON (ENSSVLG00005001957) #1668 AND ENSSVLG00005001995 #1665 SYNTENIC BLOCK FROM ENSSVLG00005001995 #10 TO RDH10 (ENSSVLG00005002017) #11 DISTANT LINK BETWEEN RDH10 (ENSSVLG00005002017) #1671 AND STAU2 (ENSSVLG00005002079) #1669 DISTANT LINK BETWEEN STAU2 (ENSSVLG00005002079) #1673 AND UBE2W (ENSSVLG00005002205) #1671 SYNTENIC BLOCK FROM UBE2W (ENSSVLG00005002205) #13 TO ENSSVLG00005002231 #14 SYNTENIC BLOCK FROM ENSSVLG00005002242 #15 TO LY96 (ENSSVLG00005002267) #16 DISTANT LINK BETWEEN LY96 (ENSSVLG00005002267) #1678 AND JPH1 (ENSSVLG00005002301) #1676 SYNTENIC BLOCK FROM JPH1 (ENSSVLG00005002301) #17 TO CRISPLD1 (ENSSVLG00005002386) #20 DISTANT LINK BETWEEN UBE2Q1 (ENSSVLG00005014507) #1682 AND HNF4G (ENSSVLG00005002470) #1344 ADJACENCY BETWEEN HNF4G (ENSSVLG00005002470) #24 AND ZFHX4 (ENSSVLG00005002527) #26 DISTANT LINK BETWEEN ZFHX4 (ENSSVLG00005002527) #1685 AND PEX2 (ENSSVLG00005002571) #1683 > Marmotini [ANCESTRALSPECIES] >> CHROMOSOME 10 [REVERSED] ADJACENCY BETWEEN ENSGT01090000260093.a #0 AND ENSGT00950000182978.A.a.b.a #2 [REVERSED] ADJACENCY BETWEEN ENSGT00950000182978.A.a.b.a #2 AND ENSGT00940000160438 #4 SYNTENIC BLOCK FROM ENSGT00940000160438 #4 TO ENSGT00940000161902.a.a #6 [REVERSED] ADJACENCY BETWEEN ENSGT00940000161902.a.a #6 AND ENSGT00940000155268.m #8 SYNTENIC BLOCK FROM ENSGT00940000155268.m #8 TO ENSGT00390000008325.b.b #9 [REVERSED] DISTANT LINK BETWEEN ENSGT00390000008325.b.b #323 AND ENSGT00950000182878.b.a.c.a.b.o.a #325 SYNTENIC BLOCK FROM ENSGT00950000182878.b.a.c.a.b.o.a #10 TO ENSGT00940000157063 #11 [REVERSED] DISTANT LINK BETWEEN ENSGT00940000157063 #320 AND ENSGT00940000154977 #322 SYNTENIC BLOCK FROM ENSGT00940000154977 #12 TO ENSGT00940000156473 #20 [REVERSED] DISTANT LINK BETWEEN ENSGT00940000156473 #310 AND ENSGT00940000158224 #312 [REVERSED] ADJACENCY BETWEEN ENSGT00940000158224 #24 AND ENSGT00940000159542 #26 [REVERSED] DISTANT LINK BETWEEN ENSGT00940000159542 #307 AND ENSGT00390000001846 #309 [REVERSED] > Alpin marmot [MODERNSPECIES] >> CHROMOSOME 16 ADJACENCY BETWEEN XKR9 (ENSMMMG00000004758) #0 AND EYA1 (ENSMMMG00000004783) #2 ADJACENCY BETWEEN EYA1 (ENSMMMG00000004783) #2 AND MSC (ENSMMMG00000004901) #4 SYNTENIC BLOCK FROM MSC (ENSMMMG00000004901) #4 TO KCNB2 (ENSMMMG00000005040) #6 ADJACENCY BETWEEN KCNB2 (ENSMMMG00000005040) #6 AND ENSMMMG00000005060 #8 SYNTENIC BLOCK FROM ENSMMMG00000005060 #8 TO SBSPON (ENSMMMG00000005085) #9 DISTANT LINK BETWEEN SBSPON (ENSMMMG00000005085) #103 AND RPL7 (ENSMMMG00000005128) #101 SYNTENIC BLOCK FROM RPL7 (ENSMMMG00000005128) #10 TO RDH10 (ENSMMMG00000005136) #11 DISTANT LINK BETWEEN RDH10 (ENSMMMG00000005136) #106 AND STAU2 (ENSMMMG00000005198) #104 SYNTENIC BLOCK FROM STAU2 (ENSMMMG00000005198) #12 TO CRISPLD1 (ENSMMMG00000005425) #20 DISTANT LINK BETWEEN CRISPLD1 (ENSMMMG00000005425) #116 AND HNF4G (ENSMMMG00000005503) #114 DISTANT LINK BETWEEN HNF4G (ENSMMMG00000005503) #118 AND ZFHX4 (ENSMMMG00000005581) #116 DISTANT LINK BETWEEN ZFHX4 (ENSMMMG00000005581) #120 AND PEX2 (ENSMMMG00000005624) #118 > Marmotini_b [ANCESTRALSPECIES] >> CHROMOSOME 52 [REVERSED] ADJACENCY BETWEEN ENSGT01090000260093.a #0 AND ENSGT00950000182978.A.a.b.a #2 [REVERSED] ADJACENCY BETWEEN ENSGT00950000182978.A.a.b.a #2 AND ENSGT00940000160438 #4 SYNTENIC BLOCK FROM ENSGT00940000160438 #4 TO ENSGT00940000161902.a.a #6 [REVERSED] ADJACENCY BETWEEN ENSGT00940000161902.a.a #6 AND ENSGT00940000155268.m #8 SYNTENIC BLOCK FROM ENSGT00940000155268.m #8 TO ENSGT00390000008325.b.b #9 [REVERSED] DISTANT LINK BETWEEN ENSGT00390000008325.b.b #10 AND ENSGT00950000182878.b.a.c.a.b.o.a #12 SYNTENIC BLOCK FROM ENSGT00950000182878.b.a.c.a.b.o.a #10 TO ENSGT00390000000742 #16 [REVERSED] ADJACENCY BETWEEN ENSGT00390000000742 #16 AND ENSGT00940000159124 #18 SYNTENIC BLOCK FROM ENSGT00940000159124 #18 TO ENSGT00940000158635 #19 [REVERSED] DISTANT LINK BETWEEN ENSGT00940000158635 #0 AND ENSGT00940000158224 #2 [REVERSED] >> CHROMOSOME 6 ADJACENCY BETWEEN ENSGT00940000159542 #26 AND ENSGT00390000001846 #28 > Squirrel [MODERNSPECIES] >> CHROMOSOME 248 ADJACENCY BETWEEN XKR9 (ENSSTOG00000027746) #0 AND EYA1 (ENSSTOG00000005218) #2 ADJACENCY BETWEEN EYA1 (ENSSTOG00000005218) #2 AND MSC (ENSSTOG00000024832) #4 SYNTENIC BLOCK FROM MSC (ENSSTOG00000024832) #4 TO TRPA1 (ENSSTOG00000005024) #5 DISTANT LINK BETWEEN TRPA1 (ENSSTOG00000005024) #5 AND SBSPON (ENSSTOG00000027846) #3 DISTANT LINK BETWEEN SBSPON (ENSSTOG00000027846) #8 AND RDH10 (ENSSTOG00000004602) #5 SYNTENIC BLOCK FROM RDH10 (ENSSTOG00000004602) #11 TO ELOC (ENSSTOG00000020823) #14 ADJACENCY BETWEEN ELOC (ENSSTOG00000020823) #14 AND GDAP1 (ENSSTOG00000004103) #18 SYNTENIC BLOCK FROM GDAP1 (ENSSTOG00000004103) #18 TO PI15 (ENSSTOG00000013212) #19 ADJACENCY BETWEEN PI15 (ENSSTOG00000013212) #19 AND HNF4G (ENSSTOG00000007181) #24 > Arctic ground squirrel [MODERNSPECIES] >> CHROMOSOME 1 [REVERSED] ADJACENCY BETWEEN ZFHX4 (ENSUPAG00010016734) #26 AND PEX2 (ENSUPAG00010016725) #28 [REVERSED] >> CHROMOSOME 721 SYNTENIC BLOCK FROM GDAP1 (ENSUPAG00010011521) #18 TO PI15 (ENSUPAG00010011507) #19 [REVERSED] >> CHROMOSOME 183 ADJACENCY BETWEEN XKR9 (ENSUPAG00010010873) #0 AND EYA1 (ENSUPAG00010010877) #2 ADJACENCY BETWEEN EYA1 (ENSUPAG00010010877) #2 AND MSC (ENSUPAG00010010953) #4 SYNTENIC BLOCK FROM MSC (ENSUPAG00010010953) #4 TO KCNB2 (ENSUPAG00010011054) #6 ADJACENCY BETWEEN KCNB2 (ENSUPAG00010011054) #6 AND TERF1 (ENSUPAG00010011060) #8 SYNTENIC BLOCK FROM TERF1 (ENSUPAG00010011060) #8 TO SBSPON (ENSUPAG00010011134) #9 DISTANT LINK BETWEEN SBSPON (ENSUPAG00010011134) #14 AND ENSUPAG00010011144 #12 SYNTENIC BLOCK FROM ENSUPAG00010011144 #10 TO LY96 (ENSUPAG00010011295) #16