> Glires [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15
DISTANT LINK BETWEEN ENSGT00940000158997 #947 AND ENSGT00940000158694 #945
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17
> Lagomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158997 #160 AND ENSGT00940000158694 #162
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17 [REVERSED]
> Pika [REFERENCESPECIES]
>> CHROMOSOME 4230
SYNTENIC BLOCK FROM EAF2 (ENSOPRG00000006122) #12 TO ENSOPRG00000006016 #17 [REVERSED]
> Rabbit [MODERNSPECIES]
>> CHROMOSOME 5

DISTANT LINK BETWEEN EAF2 (ENSOCUG00000007081) #521 AND IQCB1 (ENSOCUG00000009145) #519
SYNTENIC BLOCK FROM IQCB1 (ENSOCUG00000009145) #13 TO HCLS1 (ENSOCUG00000012449) #15
DISTANT LINK BETWEEN HCLS1 (ENSOCUG00000012449) #525 AND POLQ (ENSOCUG00000008077) #523
SYNTENIC BLOCK FROM POLQ (ENSOCUG00000008077) #16 TO STXBP5L (ENSOCUG00000005835) #17
> Rodentia [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158997 #327 AND ENSGT00940000158694 #329
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17 [REVERSED]
> Rodentia_A [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15
DISTANT LINK BETWEEN ENSGT00940000158997 #618 AND ENSGT00940000158694 #616
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17
> Hystricomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15
DISTANT LINK BETWEEN ENSGT00940000158997 #87 AND ENSGT00940000158694 #85
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17
> Hystricomorpha_a [ANCESTRALSPECIES]
>> CHROMOSOME 36
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158997 #105 AND ENSGT00940000158694 #107
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17 [REVERSED]
> Guinea pig [MODERNSPECIES]
>> CHROMOSOME 35
SYNTENIC BLOCK FROM EAF2 (ENSCPOG00000006427) #12 TO HCLS1 (ENSCPOG00000006399) #15 [REVERSED]
DISTANT LINK BETWEEN HCLS1 (ENSCPOG00000006399) #100 AND STXBP5L (ENSCPOG00000008283) #103
 [REVERSED]
> Hystricomorpha_b [ANCESTRALSPECIES]
>> CHROMOSOME 32
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158997 #103 AND ENSGT00940000158694 #105
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17 [REVERSED]
> Degu [MODERNSPECIES]
>> CHROMOSOME 188
SYNTENIC BLOCK FROM EAF2 (ENSODEG00000007603) #12 TO HCLS1 (ENSODEG00000009049) #15
DISTANT LINK BETWEEN HCLS1 (ENSODEG00000009049) #68 AND POLQ (ENSODEG00000007851) #65
SYNTENIC BLOCK FROM POLQ (ENSODEG00000007851) #16 TO STXBP5L (ENSODEG00000007458) #17
> Long-tailed chinchilla [MODERNSPECIES]
>> CHROMOSOME 134
SYNTENIC BLOCK FROM EAF2 (ENSCLAG00000014487) #12 TO HCLS1 (ENSCLAG00000013865) #15 [REVERSED]
DISTANT LINK BETWEEN HCLS1 (ENSCLAG00000013865) #105 AND POLQ (ENSCLAG00000008388) #107
SYNTENIC BLOCK FROM POLQ (ENSCLAG00000008388) #16 TO STXBP5L (ENSCLAG00000008959) #17 [REVERSED]
> Naked mole-rat female [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM EAF2 (ENSHGLG00000019361) #12 TO HCLS1 (ENSHGLG00000019092) #15
DISTANT LINK BETWEEN HCLS1 (ENSHGLG00000019092) #751 AND ENSHGLG00000012935 #749

DISTANT LINK BETWEEN ENSHGLG00000012935 #753 AND STXBP5L (ENSHGLG00000016821) #751

> Sciuridae [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158997 #316 AND ENSGT00940000158694 #318
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17 [REVERSED]
> Eurasian red squirrel [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM EAF2 (ENSSVLG00005005767) #12 TO HCLS1 (ENSSVLG00005005312) #15 [REVERSED]
DISTANT LINK BETWEEN HCLS1 (ENSSVLG00005005312) #368 AND POLQ (ENSSVLG00005005121) #372
SYNTENIC BLOCK FROM POLQ (ENSSVLG00005005121) #16 TO STXBP5L (ENSSVLG00005004686) #17 [REVERSED]
> Marmotini [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15
DISTANT LINK BETWEEN ENSGT00940000158997 #72 AND ENSGT00940000158694 #70
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17
> Alpin marmot [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM IQCB1 (ENSMMMG00000013895) #13 TO HCLS1 (ENSMMMG00000013942) #15
DISTANT LINK BETWEEN HCLS1 (ENSMMMG00000013942) #90 AND POLQ (ENSMMMG00000013983) #88
SYNTENIC BLOCK FROM POLQ (ENSMMMG00000013983) #16 TO STXBP5L (ENSMMMG00000014091) #17
> Marmotini_b [ANCESTRALSPECIES]
>> CHROMOSOME 36
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158997 #77 AND ENSGT00940000158694 #79
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17 [REVERSED]
> Squirrel [MODERNSPECIES]
>> CHROMOSOME 136
SYNTENIC BLOCK FROM EAF2 (ENSSTOG00000019911) #12 TO HCLS1 (ENSSTOG00000010016) #15 [REVERSED]
DISTANT LINK BETWEEN HCLS1 (ENSSTOG00000010016) #48 AND POLQ (ENSSTOG00000009954) #50
SYNTENIC BLOCK FROM POLQ (ENSSTOG00000009954) #16 TO STXBP5L (ENSSTOG00000009925) #17 [REVERSED]
> Arctic ground squirrel [MODERNSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM EAF2 (ENSUPAG00010020354) #12 TO HCLS1 (ENSUPAG00010020307) #15 [REVERSED]
DISTANT LINK BETWEEN HCLS1 (ENSUPAG00010020307) #74 AND POLQ (ENSUPAG00010020281) #76
SYNTENIC BLOCK FROM POLQ (ENSUPAG00010020281) #16 TO STXBP5L (ENSUPAG00010020087) #17 [REVERSED]
> Rodentia_B [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158997 #321 AND ENSGT00940000158694 #323
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17 [REVERSED]
> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15
DISTANT LINK BETWEEN ENSGT00940000158997 #157 AND ENSGT00940000158694 #155
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17
> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158997 #323 AND ENSGT00940000158694 #325
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17 [REVERSED]
> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 1215
SYNTENIC BLOCK FROM Eaf2 (ENSNGAG00000018733) #12 TO Hcls1 (ENSNGAG00000022704) #15 [REVERSED]
DISTANT LINK BETWEEN Hcls1 (ENSNGAG00000022704) #38 AND Polq (ENSNGAG00000024216) #40
SYNTENIC BLOCK FROM Polq (ENSNGAG00000024216) #16 TO Stxbp5l (ENSNGAG00000015316) #17 [REVERSED]
> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15
DISTANT LINK BETWEEN ENSGT00940000158997 #230 AND ENSGT00940000158694 #228
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17
> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15
DISTANT LINK BETWEEN ENSGT00940000158997 #243 AND ENSGT00940000158694 #241
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17
> Rat [MODERNSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM Eaf2 (ENSRNOG00000002350) #12 TO Hcls1 (ENSRNOG00000038881) #15 [REVERSED]
DISTANT LINK BETWEEN Hcls1 (ENSRNOG00000038881) #332 AND Polq (ENSRNOG00000002471) #335
SYNTENIC BLOCK FROM Polq (ENSRNOG00000002471) #16 TO Stxbp5l (ENSRNOG00000002496) #17 [REVERSED]
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158997 #290 AND ENSGT00940000158694 #292
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17 [REVERSED]
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM Eaf2 (MGP_PahariEiJ_G0016421) #12 TO Hcls1 (MGP_PahariEiJ_G0016424) #15
DISTANT LINK BETWEEN Hcls1 (MGP_PahariEiJ_G0016424) #336 AND Polq (MGP_PahariEiJ_G0016426) #334
SYNTENIC BLOCK FROM Polq (MGP_PahariEiJ_G0016426) #16 TO Stxbp5l (MGP_PahariEiJ_G0016427) #17
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158997 #296 AND ENSGT00940000158694 #298
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17 [REVERSED]
> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM Eaf2 (MGP_CAROLIEiJ_G0020720) #12 TO Hcls1 (MGP_CAROLIEiJ_G0020723) #15
DISTANT LINK BETWEEN Hcls1 (MGP_CAROLIEiJ_G0020723) #343 AND Polq (MGP_CAROLIEiJ_G0020725) #341
SYNTENIC BLOCK FROM Polq (MGP_CAROLIEiJ_G0020725) #16 TO MGP_CAROLIEiJ_G0020726 #17
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158997 #299 AND ENSGT00940000158694 #301
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17 [REVERSED]
> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15
DISTANT LINK BETWEEN ENSGT00940000158997 #340 AND ENSGT00940000158694 #338
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17
> spretus [MODERNSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM Eaf2 (MGP_SPRETEiJ_G0021620) #12 TO Hcls1 (MGP_SPRETEiJ_G0021623) #15
DISTANT LINK BETWEEN Hcls1 (MGP_SPRETEiJ_G0021623) #351 AND Polq (MGP_SPRETEiJ_G0021625) #349
SYNTENIC BLOCK FROM Polq (MGP_SPRETEiJ_G0021625) #16 TO Stxbp5l (MGP_SPRETEiJ_G0021626) #17
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM Eaf2 (ENSMSIG00000017229) #12 TO Hcls1 (ENSMSIG00000017414) #15
DISTANT LINK BETWEEN Hcls1 (ENSMSIG00000017414) #11 AND Polq (ENSMSIG00000017530) #9

DISTANT LINK BETWEEN Polq (ENSMSIG00000017530) #13 AND Stxbp5l (ENSMSIG00000017754) #11

> Mouse [MODERNSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM Eaf2 (ENSMUSG00000022838) #12 TO Hcls1 (ENSMUSG00000022831) #15
DISTANT LINK BETWEEN Hcls1 (ENSMUSG00000022831) #358 AND Polq (ENSMUSG00000034206) #356
SYNTENIC BLOCK FROM Polq (ENSMUSG00000034206) #16 TO Stxbp5l (ENSMUSG00000022829) #17
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158997 #270 AND ENSGT00940000158694 #272
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17 [REVERSED]
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15
DISTANT LINK BETWEEN ENSGT00940000158997 #234 AND ENSGT00940000158694 #232
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM Eaf2 (ENSPEMG00000023833) #12 TO Hcls1 (ENSPEMG00000000520) #15
DISTANT LINK BETWEEN Hcls1 (ENSPEMG00000000520) #268 AND Polq (ENSPEMG00000017429) #266
SYNTENIC BLOCK FROM Polq (ENSPEMG00000017429) #16 TO Stxbp5l (ENSPEMG00000004327) #17
> Prairie vole [MODERNSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM Eaf2 (ENSMOCG00000015355) #12 TO Golgb1 (ENSMOCG00000009516) #14

DISTANT LINK BETWEEN ENSMOCG00000022104 #503 AND Polq (ENSMOCG00000016969) #501
SYNTENIC BLOCK FROM Polq (ENSMOCG00000016969) #16 TO Stxbp5l (ENSMOCG00000000855) #17
> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00390000017724.a.b #12 TO ENSGT00940000158997 #15
DISTANT LINK BETWEEN ENSGT00940000158997 #213 AND ENSGT00940000158694 #211
SYNTENIC BLOCK FROM ENSGT00940000158694 #16 TO ENSGT00950000182906.b.b #17
> Chinese hamster chok1gshd [MODERNSPECIES]
>> CHROMOSOME 382
SYNTENIC BLOCK FROM Eaf2 (ENSCGRG00001001162) #12 TO Hcls1 (ENSCGRG00001024176) #15
DISTANT LINK BETWEEN Hcls1 (ENSCGRG00001024176) #236 AND Polq (ENSCGRG00001013184) #234
SYNTENIC BLOCK FROM Polq (ENSCGRG00001013184) #16 TO Stxbp5l (ENSCGRG00001011397) #17
> Golden Hamster [MODERNSPECIES]
>> CHROMOSOME 645
SYNTENIC BLOCK FROM Eaf2 (ENSMAUG00000019901) #12 TO Stxbp5l (ENSMAUG00000001984) #17 [REVERSED]
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 137
SYNTENIC BLOCK FROM Iqcb1 (ENSJJAG00000015154) #13 TO Hcls1 (ENSJJAG00000015789) #15
DISTANT LINK BETWEEN Hcls1 (ENSJJAG00000015789) #16 AND Stxbp5l (ENSJJAG00000019547) #14

> Kangaroo rat [MODERNSPECIES]
>> CHROMOSOME 364
SYNTENIC BLOCK FROM Eaf2 (ENSDORG00000001115) #12 TO Hcls1 (ENSDORG00000002422) #15
DISTANT LINK BETWEEN Hcls1 (ENSDORG00000002422) #94 AND Polq (ENSDORG00000002416) #92
SYNTENIC BLOCK FROM Polq (ENSDORG00000002416) #16 TO Stxbp5l (ENSDORG00000007287) #17