> Glires [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000161059 #12
DISTANT LINK BETWEEN ENSGT00940000161059 #99 AND ENSGT00940000154857 #97
SYNTENIC BLOCK FROM ENSGT00940000154857 #13 TO ENSGT00940000158813 #29
> Rodentia [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29 [REVERSED]
> Rodentia_A [ANCESTRALSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29 [REVERSED]
> Sciuridae [ANCESTRALSPECIES]
>> CHROMOSOME 41
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29
> Marmotini [ANCESTRALSPECIES]
>> CHROMOSOME 49
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29
> Marmotini_b [ANCESTRALSPECIES]
>> CHROMOSOME 62
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29 [REVERSED]
> Squirrel [REFERENCESPECIES]
>> CHROMOSOME 202
SYNTENIC BLOCK FROM IRAK2 (ENSSTOG00000013972) #0 TO ENSSTOG00000029032 #30
> Arctic ground squirrel [MODERNSPECIES]
>> CHROMOSOME 23
 [REVERSED]
ADJACENCY BETWEEN IRAK2 (ENSUPAG00010022988) #0 AND BRK1 (ENSUPAG00010022984) #2
SYNTENIC BLOCK FROM BRK1 (ENSUPAG00010022984) #2 TO CAMK1 (ENSUPAG00010022925) #16 [REVERSED]
ADJACENCY BETWEEN CAMK1 (ENSUPAG00010022925) #16 AND BRPF1 (ENSUPAG00010022889) #18
SYNTENIC BLOCK FROM BRPF1 (ENSUPAG00010022889) #18 TO LMCD1 (ENSUPAG00010022849) #29 [REVERSED]
> Alpin marmot [MODERNSPECIES]
>> CHROMOSOME 40
SYNTENIC BLOCK FROM IRAK2 (ENSMMMG00000009442) #0 TO IL17RC (ENSMMMG00000009153) #8 [REVERSED]
DISTANT LINK BETWEEN IL17RC (ENSMMMG00000009153) #57 AND ENSMMMG00000009135 #59
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSMMMG00000009145 #56 AND JAGN1 (ENSMMMG00000009124) #58
SYNTENIC BLOCK FROM JAGN1 (ENSMMMG00000009124) #10 TO RPUSD3 (ENSMMMG00000009104) #12 [REVERSED]
DISTANT LINK BETWEEN RPUSD3 (ENSMMMG00000009104) #52 AND ENSMMMG00000009087 #54
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSMMMG00000009096 #51 AND ARPC4 (ENSMMMG00000009043) #53
SYNTENIC BLOCK FROM ARPC4 (ENSMMMG00000009043) #14 TO LMCD1 (ENSMMMG00000008370) #29 [REVERSED]
> Eurasian red squirrel [MODERNSPECIES]
>> CHROMOSOME 16


DISTANT LINK BETWEEN ENSSVLG00005010009 #475 AND ENSSVLG00005007543 #291
 [REVERSED]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM IRAK2 (ENSSVLG00005024086) #0 TO LMCD1 (ENSSVLG00005025633) #29
> Hystricomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29
> Hystricomorpha_a [ANCESTRALSPECIES]
>> CHROMOSOME 36
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29 [REVERSED]
> Guinea pig [MODERNSPECIES]
>> CHROMOSOME 87
SYNTENIC BLOCK FROM IRAK2 (ENSCPOG00000001184) #0 TO LMCD1 (ENSCPOG00000032663) #29
> Hystricomorpha_b [ANCESTRALSPECIES]
>> CHROMOSOME 32
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29 [REVERSED]
> Degu [MODERNSPECIES]
>> CHROMOSOME 49
SYNTENIC BLOCK FROM IRAK2 (ENSODEG00000018213) #0 TO MTMR14 (ENSODEG00000018300) #20
DISTANT LINK BETWEEN MTMR14 (ENSODEG00000018300) #94 AND LHFPL4 (ENSODEG00000018130) #92

DISTANT LINK BETWEEN LHFPL4 (ENSODEG00000018130) #96 AND SETD5 (ENSODEG00000018265) #94
SYNTENIC BLOCK FROM SETD5 (ENSODEG00000018265) #22 TO RAD18 (ENSODEG00000018158) #25
DISTANT LINK BETWEEN RAD18 (ENSODEG00000018158) #101 AND OXTR (ENSODEG00000018131) #99
SYNTENIC BLOCK FROM OXTR (ENSODEG00000018131) #26 TO CAV3 (ENSODEG00000018263) #27
>> CHROMOSOME 188
SYNTENIC BLOCK FROM SSUH2 (ENSODEG00000005982) #28 TO LMCD1 (ENSODEG00000005248) #29
> Long-tailed chinchilla [MODERNSPECIES]
>> CHROMOSOME 268
SYNTENIC BLOCK FROM IRAK2 (ENSCLAG00000001248) #0 TO MTMR14 (ENSCLAG00000000926) #20 [REVERSED]
DISTANT LINK BETWEEN MTMR14 (ENSCLAG00000000926) #8 AND LHFPL4 (ENSCLAG00000001079) #11
SYNTENIC BLOCK FROM LHFPL4 (ENSCLAG00000001079) #21 TO LMCD1 (ENSCLAG00000001274) #29 [REVERSED]
> Naked mole-rat female [MODERNSPECIES]
>> CHROMOSOME 11


DISTANT LINK BETWEEN ENSHGLG00000039395 #656 AND ENSHGLG00000035278 #649
SYNTENIC BLOCK FROM ENSHGLG00000035278 #2 TO IL17RE (ENSHGLG00000013446) #9
ADJACENCY BETWEEN IL17RE (ENSHGLG00000013446) #9 AND CIDEC (ENSHGLG00000013573) #11
SYNTENIC BLOCK FROM CIDEC (ENSHGLG00000013573) #11 TO MTMR14 (ENSHGLG00000017947) #20
DISTANT LINK BETWEEN MTMR14 (ENSHGLG00000017947) #675 AND LHFPL4 (ENSHGLG00000043991) #673

DISTANT LINK BETWEEN LHFPL4 (ENSHGLG00000043991) #677 AND SETD5 (ENSHGLG00000016297) #675
SYNTENIC BLOCK FROM SETD5 (ENSHGLG00000016297) #22 TO ENSHGLG00000006418 #29
> Rodentia_B [ANCESTRALSPECIES]
>> CHROMOSOME 26
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29 [REVERSED]
> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 36
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29 [REVERSED]
> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 37
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29 [REVERSED]
> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 1707
SYNTENIC BLOCK FROM Irak2 (ENSNGAG00000011088) #0 TO Fancd2os (ENSNGAG00000024230) #3 [REVERSED]
DISTANT LINK BETWEEN Fancd2os (ENSNGAG00000024230) #27 AND Fancd2 (ENSNGAG00000021685) #29
SYNTENIC BLOCK FROM Fancd2 (ENSNGAG00000021685) #4 TO Lmcd1 (ENSNGAG00000005048) #29 [REVERSED]
> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29
> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29
> Rat [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM Irak2 (ENSRNOG00000021817) #0 TO Lmcd1 (ENSRNOG00000005690) #29 [REVERSED]
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM Irak2 (MGP_PahariEiJ_G0022488) #0 TO Fancd2os (MGP_PahariEiJ_G0022485) #3 [REVERSED]
DISTANT LINK BETWEEN Fancd2os (MGP_PahariEiJ_G0022485) #827 AND Emc3 (MGP_PahariEiJ_G0022483) #829
SYNTENIC BLOCK FROM Emc3 (MGP_PahariEiJ_G0022483) #5 TO Lmcd1 (MGP_PahariEiJ_G0022459) #29 [REVERSED]
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29
> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM Irak2 (MGP_CAROLIEiJ_G0028737) #0 TO Lmcd1 (MGP_CAROLIEiJ_G0028708) #29 [REVERSED]
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29
> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29
> spretus [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM Irak2 (MGP_SPRETEiJ_G0029765) #0 TO Lmcd1 (MGP_SPRETEiJ_G0029736) #29 [REVERSED]
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 3169
SYNTENIC BLOCK FROM Irak2 (ENSMSIG00000025877) #0 TO Cidec (ENSMSIG00000026617) #11
DISTANT LINK BETWEEN Cidec (ENSMSIG00000026617) #20 AND ENSMSIG00000026760 #18


DISTANT LINK BETWEEN Ttll3 (ENSMSIG00000026655) #21 AND Arpc4 (ENSMSIG00000026788) #19
SYNTENIC BLOCK FROM Arpc4 (ENSMSIG00000026788) #14 TO Thumpd3 (ENSMSIG00000027513) #23
DISTANT LINK BETWEEN Thumpd3 (ENSMSIG00000027513) #32 AND Srgap3 (ENSMSIG00000027543) #30
SYNTENIC BLOCK FROM Srgap3 (ENSMSIG00000027543) #24 TO Cav3 (ENSMSIG00000027763) #27
DISTANT LINK BETWEEN Cav3 (ENSMSIG00000027763) #37 AND Ssu2 (ENSMSIG00000027771) #35
SYNTENIC BLOCK FROM Ssu2 (ENSMSIG00000027771) #28 TO Lmcd1 (ENSMSIG00000027786) #29
> Mouse [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM Irak2 (ENSMUSG00000060477) #0 TO Lmcd1 (ENSMUSG00000057604) #29 [REVERSED]
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29 [REVERSED]
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29 [REVERSED]
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM Irak2 (ENSPEMG00000012267) #0 TO Fancd2os (ENSPEMG00000025831) #3 [REVERSED]
DISTANT LINK BETWEEN Fancd2os (ENSPEMG00000025831) #902 AND Fancd2 (ENSPEMG00000009172) #904
SYNTENIC BLOCK FROM Fancd2 (ENSPEMG00000009172) #4 TO Il17re (ENSPEMG00000011109) #9 [REVERSED]
DISTANT LINK BETWEEN Il17re (ENSPEMG00000011109) #895 AND Cidec (ENSPEMG00000014459) #897
SYNTENIC BLOCK FROM Cidec (ENSPEMG00000014459) #11 TO Lmcd1 (ENSPEMG00000013048) #29 [REVERSED]
> Prairie vole [MODERNSPECIES]
>> CHROMOSOME 84
SYNTENIC BLOCK FROM Irak2 (ENSMOCG00000002120) #0 TO Arpc4 (ENSMOCG00000020537) #14 [REVERSED]
DISTANT LINK BETWEEN Arpc4 (ENSMOCG00000020537) #147 AND ENSMOCG00000017039 #149
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSMOCG00000021227 #146 AND Camk1 (ENSMOCG00000013180) #148
SYNTENIC BLOCK FROM Camk1 (ENSMOCG00000013180) #16 TO Cpne9 (ENSMOCG00000002818) #19 [REVERSED]
DISTANT LINK BETWEEN Cpne9 (ENSMOCG00000002818) #141 AND ENSMOCG00000010990 #143
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSMOCG00000018949 #140 AND Lhfpl4 (ENSMOCG00000002060) #142
SYNTENIC BLOCK FROM Lhfpl4 (ENSMOCG00000002060) #21 TO Lmcd1 (ENSMOCG00000013328) #29 [REVERSED]
> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000158813 #29 [REVERSED]
> Chinese hamster chok1gshd [MODERNSPECIES]
>> CHROMOSOME 2
 [REVERSED]
DISTANT LINK BETWEEN ENSCGRG00001024022 #265 AND ENSCGRG00001016705 #629
 [REVERSED]
>> CHROMOSOME 144
SYNTENIC BLOCK FROM Irak2 (ENSCGRG00001011625) #0 TO ENSCGRG00001012137 #10 [REVERSED]
DISTANT LINK BETWEEN ENSCGRG00001012137 #104 AND Cidec (ENSCGRG00001011026) #106
SYNTENIC BLOCK FROM Cidec (ENSCGRG00001011026) #11 TO Srgap3 (ENSCGRG00001010935) #24 [REVERSED]
DISTANT LINK BETWEEN Srgap3 (ENSCGRG00001010935) #89 AND ENSCGRG00001018154 #91
 [REVERSED]
DISTANT LINK BETWEEN ENSCGRG00001018154 #87 AND Oxtr (ENSCGRG00001014988) #89
SYNTENIC BLOCK FROM Oxtr (ENSCGRG00001014988) #26 TO Lmcd1 (ENSCGRG00001009463) #29 [REVERSED]
>> CHROMOSOME 188
 [REVERSED]
 [REVERSED]
> Golden Hamster [MODERNSPECIES]
>> CHROMOSOME 622
SYNTENIC BLOCK FROM ENSMAUG00000020829 #0 TO ENSMAUG00000010376 #7
ADJACENCY BETWEEN ENSMAUG00000010376 #7 AND Il17re (ENSMAUG00000001338) #9
SYNTENIC BLOCK FROM Il17re (ENSMAUG00000001338) #9 TO Camk1 (ENSMAUG00000007551) #16
ADJACENCY BETWEEN Camk1 (ENSMAUG00000007551) #16 AND Brpf1 (ENSMAUG00000020760) #18
SYNTENIC BLOCK FROM Brpf1 (ENSMAUG00000020760) #18 TO ENSMAUG00000018826 #20
SYNTENIC BLOCK FROM ENSMAUG00000018733 #20 TO Lmcd1 (ENSMAUG00000014020) #29
>> CHROMOSOME 187
SYNTENIC BLOCK FROM ENSMAUG00000000834 #7 TO ENSMAUG00000011029 #8 [REVERSED]
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 45

DISTANT LINK BETWEEN Irak2 (ENSJJAG00000019987) #2 AND Vhl (ENSJJAG00000012548) #0
SYNTENIC BLOCK FROM Vhl (ENSJJAG00000012548) #1 TO ENSJJAG00000010617 #13
SYNTENIC BLOCK FROM ENSJJAG00000023744 #13 TO Thumpd3 (ENSJJAG00000017751) #23
DISTANT LINK BETWEEN Thumpd3 (ENSJJAG00000017751) #28 AND Srgap3 (ENSJJAG00000011741) #25

DISTANT LINK BETWEEN Srgap3 (ENSJJAG00000011741) #30 AND Rad18 (ENSJJAG00000001484) #28

DISTANT LINK BETWEEN Rad18 (ENSJJAG00000001484) #32 AND Oxtr (ENSJJAG00000016459) #30
SYNTENIC BLOCK FROM Oxtr (ENSJJAG00000016459) #26 TO Lmcd1 (ENSJJAG00000016825) #29
> Kangaroo rat [MODERNSPECIES]
>> CHROMOSOME 331
SYNTENIC BLOCK FROM Irak2 (ENSDORG00000012277) #0 TO Emc3 (ENSDORG00000007771) #5
ADJACENCY BETWEEN Emc3 (ENSDORG00000007771) #5 AND ENSDORG00000026089 #7

SYNTENIC BLOCK FROM ENSDORG00000009566 #7 TO Il17rc (ENSDORG00000009559) #8
ADJACENCY BETWEEN Il17rc (ENSDORG00000009559) #8 AND Jagn1 (ENSDORG00000029815) #10
SYNTENIC BLOCK FROM Jagn1 (ENSDORG00000029815) #10 TO Cidec (ENSDORG00000006927) #11
DISTANT LINK BETWEEN Cidec (ENSDORG00000006927) #58 AND Rpusd3 (ENSDORG00000026827) #56
SYNTENIC BLOCK FROM Rpusd3 (ENSDORG00000026827) #12 TO ENSDORG00000011019 #15
SYNTENIC BLOCK FROM ENSDORG00000024872 #15 TO Rad18 (ENSDORG00000001099) #25
DISTANT LINK BETWEEN Rad18 (ENSDORG00000001099) #74 AND Oxtr (ENSDORG00000007711) #72
SYNTENIC BLOCK FROM Oxtr (ENSDORG00000007711) #26 TO Lmcd1 (ENSDORG00000003932) #29
> Lagomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 124
SYNTENIC BLOCK FROM ENSGT00940000159835 #0 TO ENSGT00940000161059 #12 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000161059 #12 AND ENSGT00940000154857 #14
SYNTENIC BLOCK FROM ENSGT00940000154857 #13 TO ENSGT00390000011230 #25 [REVERSED]
>> CHROMOSOME 169
SYNTENIC BLOCK FROM ENSGT01050000244882.a.a.b #26 TO ENSGT00940000158813 #29
> Pika [MODERNSPECIES]
>> CHROMOSOME 2978
SYNTENIC BLOCK FROM OXTR (ENSOPRG00000003503) #26 TO LMCD1 (ENSOPRG00000003445) #29 [REVERSED]
>> CHROMOSOME 2796
SYNTENIC BLOCK FROM FANCD2OS (ENSOPRG00000000107) #3 TO ENSOPRG00000000099 #7 [REVERSED]
>> CHROMOSOME 1241
SYNTENIC BLOCK FROM IL17RC (ENSOPRG00000002371) #8 TO RPUSD3 (ENSOPRG00000002300) #12 [REVERSED]
DISTANT LINK BETWEEN RPUSD3 (ENSOPRG00000002300) #8 AND TTLL3 (ENSOPRG00000018218) #10
 [REVERSED]
ADJACENCY BETWEEN TTLL3 (ENSOPRG00000018218) #13 AND CAMK1 (ENSOPRG00000002265) #16
SYNTENIC BLOCK FROM CAMK1 (ENSOPRG00000002265) #16 TO THUMPD3 (ENSOPRG00000002020) #23 [REVERSED]
>> CHROMOSOME 1240
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 2967
SYNTENIC BLOCK FROM SRGAP3 (ENSOPRG00000013883) #24 TO RAD18 (ENSOPRG00000013856) #25 [REVERSED]
> Rabbit [MODERNSPECIES]
>> CHROMOSOME 535
SYNTENIC BLOCK FROM IRAK2 (ENSOCUG00000002819) #0 TO ENSOCUG00000002802 #4
SYNTENIC BLOCK FROM ENSOCUG00000035995 #4 TO ENSOCUG00000017170 #24
>> CHROMOSOME 436

ADJACENCY BETWEEN RAD18 (ENSOCUG00000000013) #25 AND CAV3 (ENSOCUG00000005950) #27
SYNTENIC BLOCK FROM CAV3 (ENSOCUG00000005950) #27 TO LMCD1 (ENSOCUG00000010136) #29