> Fungi/Metazoa group [ANCESTRALSPECIES]
> Bilateria [ANCESTRALSPECIES]
> Chordata [ANCESTRALSPECIES]
> Vertebrata [ANCESTRALSPECIES]
> Gnathostomata [ANCESTRALSPECIES]
>> CHROMOSOME 109
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Euteleostomi [ANCESTRALSPECIES]
>> CHROMOSOME 226
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Sarcopterygii [ANCESTRALSPECIES]
>> CHROMOSOME 122
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Tetrapoda [ANCESTRALSPECIES]
>> CHROMOSOME 49
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Amniota [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Mammalia [ANCESTRALSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Theria [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Eutheria [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Boreoeutheria [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Euarchontoglires [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Primates [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Haplorrhini [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Simiiformes [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Catarrhini [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Cercopithecidae [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Rhinopithecus [ANCESTRALSPECIES]
>> CHROMOSOME 176
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Black snub-nosed monkey [REFERENCESPECIES]
>> CHROMOSOME 2601
SYNTENIC BLOCK FROM PAX1 (ENSRBIG00000042214) #14 TO ENSRBIG00000014103 #16
> Golden snub-nosed monkey [MODERNSPECIES]
>> CHROMOSOME 1446
SYNTENIC BLOCK FROM PAX1 (ENSRROG00000038854) #14 TO NKX2-2 (ENSRROG00000041150) #15
> Cercopithecinae [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Cercopithecinae_a [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Cercopithecinae_b [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Olive baboon [MODERNSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM PAX1 (ENSPANG00000008282) #14 TO ENSPANG00000043988 #15
> Cercopithecinae_d [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Drill [MODERNSPECIES]
>> CHROMOSOME 1539
SYNTENIC BLOCK FROM PAX1 (ENSMLEG00000040057) #14 TO NKX2-2 (ENSMLEG00000016379) #15
> Sooty mangabey [MODERNSPECIES]
>> CHROMOSOME 602
SYNTENIC BLOCK FROM PAX1 (ENSCATG00000029185) #14 TO NKX2-2 (ENSCATG00000041599) #15
> Macaca [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Pig-tailed macaque [MODERNSPECIES]
>> CHROMOSOME 130
SYNTENIC BLOCK FROM PAX1 (ENSMNEG00000040896) #14 TO NKX2-2 (ENSMNEG00000045238) #15
> Macaca_a [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Crab-eating macaque [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM PAX1 (ENSMFAG00000044435) #14 TO NKX2-2 (ENSMFAG00000044462) #15
> Rhesus [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM PAX1 (ENSMMUG00000019409) #14 TO ENSMMUG00000056728 #15
> Vervet Monkey [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM PAX1 (ENSCSAG00000011068) #14 TO NKX2-2 (ENSCSAG00000011072) #15 [REVERSED]
> Hominoidea [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Hominidae [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Orangutan [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM PAX1 (ENSPPYG00000010758) #14 TO NKX2-2 (ENSPPYG00000010757) #15 [REVERSED]
> Homo/Pan/Gorilla group [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
DISTANT LINK BETWEEN ENSGT00940000159727 #422 AND ENSGT00910000148254 #420

> Gorilla [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM PAX1 (ENSGGOG00000016075) #14 TO NKX2-2 (ENSGGOG00000008080) #15 [REVERSED]
DISTANT LINK BETWEEN NKX2-2 (ENSGGOG00000008080) #162 AND ENSGGOG00000038958 #164
 [REVERSED]
> Homo/Pan group [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
DISTANT LINK BETWEEN ENSGT00940000159727 #422 AND ENSGT00910000148254 #420

> Pan [ANCESTRALSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
DISTANT LINK BETWEEN ENSGT00940000159727 #420 AND ENSGT00910000148254 #418

> Chimpanzee [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM PAX1 (ENSPTRG00000013311) #14 TO NKX2-2 (ENSPTRG00000013310) #15 [REVERSED]
DISTANT LINK BETWEEN NKX2-2 (ENSPTRG00000013310) #159 AND ENSPTRG00000047508 #161
 [REVERSED]
> Bonobo [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM PAX1 (ENSPPAG00000035911) #14 TO ENSPPAG00000037349 #16 [REVERSED]
> Human [MODERNSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM PAX1 (ENSG00000125813) #14 TO NKX2-2 (ENSG00000125820) #15 [REVERSED]
> Gibbon [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM PAX1 (ENSNLEG00000010049) #14 TO NKX2-2 (ENSNLEG00000010048) #15
> Platyrrhini [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Cebidae [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Marmoset [MODERNSPECIES]
>> CHROMOSOME 17
 [REVERSED]
DISTANT LINK BETWEEN PAX1 (ENSCJAG00000005773) #262 AND ENSCJAG00000051781 #265
 [REVERSED]
> Cebidae_a [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Bolivian squirrel monkey [MODERNSPECIES]
>> CHROMOSOME 96
SYNTENIC BLOCK FROM PAX1 (ENSSBOG00000032573) #14 TO NKX2-2 (ENSSBOG00000032080) #15
> Capuchin [MODERNSPECIES]
>> CHROMOSOME 134
SYNTENIC BLOCK FROM PAX1 (ENSCCAG00000025569) #14 TO NKX2-2 (ENSCCAG00000035862) #15
> Mas night monkey [MODERNSPECIES]
>> CHROMOSOME 720
SYNTENIC BLOCK FROM PAX1 (ENSANAG00000031911) #14 TO NKX2-2 (ENSANAG00000031496) #15
> Tarsier [MODERNSPECIES]
> Strepsirrhini [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Bushbaby [MODERNSPECIES]
>> CHROMOSOME 251
SYNTENIC BLOCK FROM PAX1 (ENSOGAG00000033162) #14 TO NKX2-2 (ENSOGAG00000029474) #15 [REVERSED]
> Lemuriformes [ANCESTRALSPECIES]
>> CHROMOSOME 44
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Mouse lemur [MODERNSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM PAX1 (ENSMICG00000016968) #14 TO NKX2-2 (ENSMICG00000045009) #15
> Lemuriformes_a [ANCESTRALSPECIES]
>> CHROMOSOME 137
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Coquerels sifaka [MODERNSPECIES]
>> CHROMOSOME 560
SYNTENIC BLOCK FROM PAX1 (ENSPCOG00000027636) #14 TO NKX2-2 (ENSPCOG00000016151) #15
> Greater bamboo lemur [MODERNSPECIES]
>> CHROMOSOME 878
SYNTENIC BLOCK FROM PAX1 (ENSPSMG00000008610) #14 TO NKX2-2 (ENSPSMG00000008596) #15 [REVERSED]
> Euarchontoglires_A [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Tree shrew [MODERNSPECIES]
> Glires [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Lagomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 57
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Pika [MODERNSPECIES]
> Rabbit [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM PAX1 (ENSOCUG00000003276) #14 TO NKX2-2 (ENSOCUG00000007166) #15
> Rodentia [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Rodentia_A [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Hystricomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Hystricomorpha_a [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Guinea pig [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM PAX1 (ENSCPOG00000002886) #14 TO NKX2-2 (ENSCPOG00000000408) #15
> Hystricomorpha_b [ANCESTRALSPECIES]
>> CHROMOSOME 31
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Degu [MODERNSPECIES]
>> CHROMOSOME 114

DISTANT LINK BETWEEN PAX1 (ENSODEG00000012427) #92 AND NKX2-2 (ENSODEG00000012371) #89

> Long-tailed chinchilla [MODERNSPECIES]
>> CHROMOSOME 122
SYNTENIC BLOCK FROM PAX1 (ENSCLAG00000016362) #14 TO NKX2-2 (ENSCLAG00000016430) #15 [REVERSED]
> Naked mole-rat female [MODERNSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM PAX1 (ENSHGLG00000015866) #14 TO NKX2-2 (ENSHGLG00000048629) #15 [REVERSED]
> Sciuridae [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Eurasian red squirrel [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM PAX1 (ENSSVLG00005000421) #14 TO NKX2-2 (ENSSVLG00005000441) #15
> Marmotini [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Alpin marmot [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM PAX1 (ENSMMMG00000004326) #14 TO NKX2-2 (ENSMMMG00000004284) #15 [REVERSED]
> Marmotini_b [ANCESTRALSPECIES]
>> CHROMOSOME 140
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Squirrel [MODERNSPECIES]
>> CHROMOSOME 220
SYNTENIC BLOCK FROM PAX1 (ENSSTOG00000003000) #14 TO NKX2-2 (ENSSTOG00000021450) #15
> Arctic ground squirrel [MODERNSPECIES]
>> CHROMOSOME 114
SYNTENIC BLOCK FROM PAX1 (ENSUPAG00010009718) #14 TO NKX2-2 (ENSUPAG00010009710) #15 [REVERSED]
> Rodentia_B [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 450
SYNTENIC BLOCK FROM Pax1 (ENSNGAG00000011690) #14 TO Nkx2-2 (ENSNGAG00000015181) #15
> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Rat [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM Pax1 (ENSRNOG00000024882) #14 TO Nkx2-2 (ENSRNOG00000012728) #15 [REVERSED]
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM Pax1 (MGP_PahariEiJ_G0025846) #14 TO Nkx2-2 (MGP_PahariEiJ_G0025845) #15 [REVERSED]
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM Pax1 (MGP_CAROLIEiJ_G0024403) #14 TO Nkx2-2 (MGP_CAROLIEiJ_G0024402) #15 [REVERSED]
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> spretus [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM Pax1 (MGP_SPRETEiJ_G0025321) #14 TO Nkx2-2 (MGP_SPRETEiJ_G0025320) #15 [REVERSED]
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 17
 [REVERSED]
DISTANT LINK BETWEEN Pax1 (ENSMSIG00000015104) #12 AND ENSMSIG00000015060 #14
 [REVERSED]
> Mouse [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM Pax1 (ENSMUSG00000037034) #14 TO Nkx2-2 (ENSMUSG00000027434) #15 [REVERSED]
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM Pax1 (ENSPEMG00000013032) #14 TO Nkx2-2 (ENSPEMG00000031205) #15 [REVERSED]
> Prairie vole [MODERNSPECIES]
>> CHROMOSOME 86
SYNTENIC BLOCK FROM Pax1 (ENSMOCG00000000474) #14 TO Nkx2-2 (ENSMOCG00000016851) #15
> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Chinese hamster chok1gshd [MODERNSPECIES]
>> CHROMOSOME 188
SYNTENIC BLOCK FROM Pax1 (ENSCGRG00001009223) #14 TO Nkx2-2 (ENSCGRG00001013924) #15
> Golden Hamster [MODERNSPECIES]
>> CHROMOSOME 650
SYNTENIC BLOCK FROM Pax1 (ENSMAUG00000019674) #14 TO Nkx2-2 (ENSMAUG00000004347) #15
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 159
SYNTENIC BLOCK FROM Pax1 (ENSJJAG00000023177) #14 TO Nkx2-2 (ENSJJAG00000022426) #15 [REVERSED]
> Kangaroo rat [MODERNSPECIES]
>> CHROMOSOME 418
SYNTENIC BLOCK FROM Pax1 (ENSDORG00000016051) #14 TO Nkx2-2 (ENSDORG00000007972) #15
> Laurasiatheria [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Eulipotyphla [ANCESTRALSPECIES]
> Common shrew [MODERNSPECIES]
> Hedgehog [MODERNSPECIES]
> Laurasiatheria_a [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Artiodactyla [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Suina [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Pig [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM PAX1 (ENSSSCG00000007112) #14 TO NKX2-2 (ENSSSCG00000040017) #15 [REVERSED]
> Chacoan peccary [MODERNSPECIES]
>> CHROMOSOME 801
SYNTENIC BLOCK FROM PAX1 (ENSCWAG00000008052) #14 TO NKX2-2 (ENSCWAG00000008122) #15
> Artiodactyla_a [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Camelidae [ANCESTRALSPECIES]
>> CHROMOSOME 49
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Arabian camel [MODERNSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM PAX1 (ENSCDRG00005019717) #14 TO NKX2-2 (ENSCDRG00005019726) #15
> Alpaca [MODERNSPECIES]
> Artiodactyla_b [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Cetacea [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Odontoceti [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Odontoceti_a [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Dolphin [MODERNSPECIES]
> Odontoceti_b [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Vaquita [MODERNSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM PAX1 (ENSPSNG00000004773) #14 TO NKX2-2 (ENSPSNG00000004832) #15
> Monodontidae [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Narwhal [MODERNSPECIES]
>> CHROMOSOME 299
SYNTENIC BLOCK FROM PAX1 (ENSMMNG00015013924) #14 TO NKX2-2 (ENSMMNG00015013937) #15
> Beluga whale [MODERNSPECIES]
>> CHROMOSOME 48
SYNTENIC BLOCK FROM PAX1 (ENSDLEG00000005123) #14 TO NKX2-2 (ENSDLEG00000005132) #15
> Sperm whale [MODERNSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM PAX1 (ENSPCTG00005009858) #14 TO NKX2-2 (ENSPCTG00005009931) #15
> Blue whale [MODERNSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM PAX1 (ENSBMSG00010013891) #14 TO NKX2-2 (ENSBMSG00010013921) #15
> Pecora [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Yarkand deer [MODERNSPECIES]
>> CHROMOSOME 15
 [REVERSED]
DISTANT LINK BETWEEN PAX1 (ENSCHYG00000023364) #201 AND NKX2-2 (ENSCHYG00000023304) #203
 [REVERSED]
> Percora_a [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Siberian musk deer [MODERNSPECIES]
>> CHROMOSOME 1194
SYNTENIC BLOCK FROM PAX1 (ENSMMSG00000018943) #14 TO NKX2-2 (ENSMMSG00000018973) #15
> Bovidae [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Bovinae [ANCESTRALSPECIES]
>> CHROMOSOME 20

DISTANT LINK BETWEEN ENSGT00940000159137 #254 AND ENSGT00940000159727 #252

> American bison [MODERNSPECIES]
>> CHROMOSOME 2997
 [REVERSED]
DISTANT LINK BETWEEN PAX1 (ENSBBBG00000022763) #17 AND ENSBBBG00000022786 #19
 [REVERSED]
> Bos [ANCESTRALSPECIES]
>> CHROMOSOME 22

DISTANT LINK BETWEEN ENSGT00940000159137.d #256 AND ENSGT00940000159727 #254

> Bos_b [ANCESTRALSPECIES]
>> CHROMOSOME 4

DISTANT LINK BETWEEN ENSGT00940000159137.d #257 AND ENSGT00940000159727 #255

> Hybrid Bos Indicus [MODERNSPECIES]
> Cow [MODERNSPECIES]
>> CHROMOSOME 4
 [REVERSED]
DISTANT LINK BETWEEN PAX1 (ENSBTAG00000006742) #203 AND NKX2-2 (ENSBTAG00000010277) #205
 [REVERSED]
> Bos_a [ANCESTRALSPECIES]
>> CHROMOSOME 7

DISTANT LINK BETWEEN ENSGT00940000159137.d #532 AND ENSGT00940000159727 #530

> Wild yak [MODERNSPECIES]
>> CHROMOSOME 194

DISTANT LINK BETWEEN PAX1 (ENSBMUG00000003140) #5 AND NKX2-2 (ENSBMUG00000003181) #3

> Domestic yak [MODERNSPECIES]
>> CHROMOSOME 3
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN PAX1 (ENSBGRG00000006855) #98 AND NKX2-2 (ENSBGRG00000006790) #101
 [REVERSED]
> Caprinae [ANCESTRALSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Goat [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM PAX1 (ENSCHIG00000025250) #14 TO NKX2-2 (ENSCHIG00000025252) #15 [REVERSED]
> Rambouillet Sheep [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM PAX1 (ENSOARG00020004579) #14 TO NKX2-2 (ENSOARG00020004554) #15 [REVERSED]
> Laurasiatheria_b [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Carnivora [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Caniformia [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Caniformia_b [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Mustelinae [ANCESTRALSPECIES]
>> CHROMOSOME 43
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Ferret [MODERNSPECIES]
>> CHROMOSOME 204
SYNTENIC BLOCK FROM PAX1 (ENSMPUG00000001187) #14 TO NKX2-2 (ENSMPUG00000001196) #15
> American mink [MODERNSPECIES]
>> CHROMOSOME 460
SYNTENIC BLOCK FROM PAX1 (ENSNVIG00000024342) #14 TO NKX2-2 (ENSNVIG00000024347) #15
> Ursidae [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Giant Panda [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM PAX1 (ENSAMEG00000012642) #14 TO NKX2-2 (ENSAMEG00000029802) #15 [REVERSED]
> Ursus [ANCESTRALSPECIES]
>> CHROMOSOME 191
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Polar bear [MODERNSPECIES]
>> CHROMOSOME 300
SYNTENIC BLOCK FROM PAX1 (ENSUMAG00000004035) #14 TO ENSUMAG00000004026 #15 [REVERSED]
> American black bear [MODERNSPECIES]
> Canidae [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Red fox [MODERNSPECIES]
>> CHROMOSOME 40
SYNTENIC BLOCK FROM PAX1 (ENSVVUG00000012146) #14 TO NKX2-2 (ENSVVUG00000012163) #15
> Canis_lupus [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Dog [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM PAX1 (ENSCAFG00845027290) #14 TO NKX2-2 (ENSCAFG00845027437) #15
> Dingo [MODERNSPECIES]
>> CHROMOSOME 343
SYNTENIC BLOCK FROM PAX1 (ENSCAFG00020027475) #14 TO NKX2-2 (ENSCAFG00020027477) #15
> Felidae [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Panthera [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Tiger [MODERNSPECIES]
>> CHROMOSOME 535
SYNTENIC BLOCK FROM PAX1 (ENSPTIG00000017141) #14 TO NKX2-2 (ENSPTIG00000016807) #15 [REVERSED]
> Panthera_a [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> leopard [MODERNSPECIES]
>> CHROMOSOME 39
SYNTENIC BLOCK FROM PAX1 (ENSPPRG00000009070) #14 TO NKX2-2 (ENSPPRG00000008916) #15
> lion [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM PAX1 (ENSPLOG00000000971) #14 TO NKX2-2 (ENSPLOG00000000985) #15
> Cat [MODERNSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM PAX1 (ENSFCAG00000004293) #14 TO NKX2-2 (ENSFCAG00000008740) #15 [REVERSED]
> Laurasiatheria_c [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Chiroptera [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Microchiroptera [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Microbat [MODERNSPECIES]
>> CHROMOSOME 1142
SYNTENIC BLOCK FROM PAX1 (ENSMLUG00000014710) #14 TO NKX2-2 (ENSMLUG00000009371) #15 [REVERSED]
> Greater horseshoe bat [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM PAX1 (ENSRFEG00010010205) #14 TO NKX2-2 (ENSRFEG00010010185) #15 [REVERSED]
> Megabat [MODERNSPECIES]
> Equus [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Horse [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM PAX1 (ENSECAG00000016945) #14 TO NKX2-2 (ENSECAG00000018977) #15
> Donkey [MODERNSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM PAX1 (ENSEASG00005002521) #14 TO NKX2-2 (ENSEASG00005038540) #15
> Atlantogenata [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Afrotheria [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Afrotheria_a [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Elephant [MODERNSPECIES]
>> CHROMOSOME 180
SYNTENIC BLOCK FROM PAX1 (ENSLAFG00000008908) #14 TO NKX2-2 (ENSLAFG00000002379) #15
> Hyrax [MODERNSPECIES]
> Tenrec [MODERNSPECIES]
> Xenarthra [ANCESTRALSPECIES]
>> CHROMOSOME 347
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Armadillo [MODERNSPECIES]
>> CHROMOSOME 425
SYNTENIC BLOCK FROM PAX1 (ENSDNOG00000033546) #14 TO NKX2-2 (ENSDNOG00000038407) #15 [REVERSED]
> Sloth [MODERNSPECIES]
> Marsupialia [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Marsupialia_b [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Diprotodontia [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Wallaby [MODERNSPECIES]
> Diprotodontia_a [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Common wonbat [MODERNSPECIES]
>> CHROMOSOME 1073
SYNTENIC BLOCK FROM PAX1 (ENSVURG00010005488) #14 TO NKX2-2 (ENSVURG00010005501) #15
> koala [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM PAX1 (ENSPCIG00000031385) #14 TO NKX2-2 (ENSPCIG00000034162) #15 [REVERSED]
> Tasmanian devil [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM PAX1 (ENSSHAG00000017556) #14 TO NKX2-2 (ENSSHAG00000004915) #15
> Opossum [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM PAX1 (ENSMODG00000006198) #14 TO NKX2-2 (ENSMODG00000006177) #15
> Platypus [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM PAX1 (ENSOANG00000002008) #14 TO ENSOANG00000047729 #15
> Sauria [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Archelosauria [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Cryptodira [ANCESTRALSPECIES]
>> CHROMOSOME 44
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Chinese turtle [MODERNSPECIES]
> Testudinoidea [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Emydidae [ANCESTRALSPECIES]
>> CHROMOSOME 41
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> painted turtle [MODERNSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM PAX1 (ENSCPBG00000023543) #14 TO NKX2-2 (ENSCPBG00000023541) #15 [REVERSED]
> Three-toed box turtle [MODERNSPECIES]
>> CHROMOSOME 62
SYNTENIC BLOCK FROM PAX1 (ENSTMTG00000013220) #14 TO NKX2-2 (ENSTMTG00000013238) #15
> Testudinidae [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Goode s thornscrub tortoise [MODERNSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM PAX1 (ENSGEVG00005017194) #14 TO NKX2-2 (ENSGEVG00005017179) #15 [REVERSED]
> Abingdon island giant tortoise [MODERNSPECIES]
>> CHROMOSOME 1558
SYNTENIC BLOCK FROM PAX1 (ENSCABG00000020492) #14 TO NKX2-2 (ENSCABG00000020493) #15
> Archosauria [ANCESTRALSPECIES]
>> CHROMOSOME 45
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Australian saltwater crocodile [MODERNSPECIES]
>> CHROMOSOME 49
SYNTENIC BLOCK FROM PAX1 (ENSCPRG00005011002) #14 TO NKX2-2 (ENSCPRG00005010983) #15 [REVERSED]
> Aves [ANCESTRALSPECIES]
>> CHROMOSOME 56
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> African ostrich [MODERNSPECIES]
> Neognathae [ANCESTRALSPECIES]
>> CHROMOSOME 32
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Galloanserae [ANCESTRALSPECIES]
>> CHROMOSOME 29
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Phasianidae [ANCESTRALSPECIES]
>> CHROMOSOME 29
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Phasianidae_b [ANCESTRALSPECIES]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Chicken [MODERNSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM PAX1 (ENSGALG00010018083) #14 TO NKX2-2 (ENSGALG00010018111) #15
> Turkey [MODERNSPECIES]
> Japanese quail [MODERNSPECIES]
> Anatidae [ANCESTRALSPECIES]
>> CHROMOSOME 45
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Duck [MODERNSPECIES]
> Pink-footed goose [MODERNSPECIES]
>> CHROMOSOME 117
SYNTENIC BLOCK FROM PAX1 (ENSABRG00000011485) #14 TO NKX2-2 (ENSABRG00000011480) #15 [REVERSED]
> Neognathae_b [ANCESTRALSPECIES]
>> CHROMOSOME 32
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Neognathae_c [ANCESTRALSPECIES]
>> CHROMOSOME 35
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Golden eagle [MODERNSPECIES]
>> CHROMOSOME 24
SYNTENIC BLOCK FROM PAX1 (ENSACCG00020006045) #14 TO NKX2-2 (ENSACCG00020006058) #15
> Kakapo [MODERNSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM PAX1 (ENSSHBG00005004267) #14 TO NKX2-2 (ENSSHBG00005004272) #15
> Passeriformes [ANCESTRALSPECIES]
>> CHROMOSOME 31
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Great tit [MODERNSPECIES]
> Passeriformes_d [ANCESTRALSPECIES]
>> CHROMOSOME 32
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Flycatcher [MODERNSPECIES]
> Passeriformes_g [ANCESTRALSPECIES]
>> CHROMOSOME 37
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Medium ground finch [MODERNSPECIES]
> Passeroidea [ANCESTRALSPECIES]
>> CHROMOSOME 34
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Common canary [MODERNSPECIES]
> Zebra finch [MODERNSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM PAX1 (ENSTGUG00000007526) #14 TO NKX2-2 (ENSTGUG00000007528) #15 [REVERSED]
> Lepidosauria [ANCESTRALSPECIES]
>> CHROMOSOME 123
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Episquamata [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Toxicofera [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Elapidae [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Indian cobra [MODERNSPECIES]
>> CHROMOSOME 2
 [REVERSED]
DISTANT LINK BETWEEN PAX1 (ENSNNAG00000012128) #1266 AND NKX2-2 (ENSNNAG00000012093) #1268
 [REVERSED]
> Elapidae_a [ANCESTRALSPECIES]
>> CHROMOSOME 35
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Blue-lipped sea krait [MODERNSPECIES]
> Acanthophiinae [ANCESTRALSPECIES]
>> CHROMOSOME 35
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15 [REVERSED]
> Mainland tiger snake [MODERNSPECIES]
>> CHROMOSOME 45
SYNTENIC BLOCK FROM PAX1 (ENSNSUG00000010743) #14 TO NKX2-2 (ENSNSUG00000010747) #15
> Eastern brown snake [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM PAX1 (ENSPTXG00000003840) #14 TO NKX2-2 (ENSPTXG00000003839) #15 [REVERSED]
> Lizard [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM PAX1 (ENSACAG00000010563) #14 TO NKX2-2 (ENSACAG00000005697) #15 [REVERSED]
> Laterata [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Common wall lizard [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM PAX1 (ENSPMRG00000020057) #14 TO NKX2-2 (ENSPMRG00000020050) #15 [REVERSED]
> Argentine black and white tegu [MODERNSPECIES]
>> CHROMOSOME 36
SYNTENIC BLOCK FROM PAX1 (ENSSMRG00000016215) #14 TO NKX2-2 (ENSSMRG00000016217) #15
> tuatara [MODERNSPECIES]
>> CHROMOSOME 1774
SYNTENIC BLOCK FROM PAX1 (ENSSPUG00000005561) #14 TO NKX2-2 (ENSSPUG00000005539) #15 [REVERSED]
> Anura [ANCESTRALSPECIES]
>> CHROMOSOME 116
SYNTENIC BLOCK FROM ENSGT00940000159137 #14 TO ENSGT00940000159727 #15
> Leishan spiny toad [MODERNSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM PAX1 (ENSLLEG00000016501) #14 TO ENSLLEG00000016343 #15 [REVERSED]
> Frog [MODERNSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM pax1 (ENSXETG00000023497) #14 TO nkx2-2 (ENSXETG00000023499) #15
> Coelacanth [MODERNSPECIES]
> Actinopterygii [ANCESTRALSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM ENSGT00940000159137.b #14 TO ENSGT00940000159727 #15 [REVERSED]
> Reedfish [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM pax1a (ENSECRG00000003390) #14 TO nkx2.2a (ENSECRG00000003378) #15 [REVERSED]
> Neopterygii [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Spotted gar [MODERNSPECIES]
>> CHROMOSOME 647
SYNTENIC BLOCK FROM pax1a (ENSLOCG00000016871) #14 TO nkx2.2a (ENSLOCG00000016872) #15
> Osteoglossocephalai [ANCESTRALSPECIES]
>> CHROMOSOME 245
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Clupeocephala [ANCESTRALSPECIES]
>> CHROMOSOME 217
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Otomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 77
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b #14 TO ENSGT00940000159727 #15 [REVERSED]
> Clupeiformes [ANCESTRALSPECIES]
>> CHROMOSOME 61
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727.h.b #15
>> CHROMOSOME 125
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b #14 TO ENSGT00940000159727.h.a #15 [REVERSED]
> Atlantic herring [MODERNSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM pax1a (ENSCHAG00000012504) #14 TO nkx2.2a (ENSCHAG00000012578) #15
>> CHROMOSOME 6
SYNTENIC BLOCK FROM PAX1 (ENSCHAG00000012216) #14 TO nkx2.2b (ENSCHAG00000012230) #15
> Denticle herring [MODERNSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM PAX1 (ENSDCDG00000004276) #14 TO nkx2.2b (ENSDCDG00000004279) #15
>> CHROMOSOME 0
SYNTENIC BLOCK FROM pax1a (ENSDCDG00000026722) #14 TO NKX2-2 (ENSDCDG00000026732) #15
> Otophysi [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b #14 TO ENSGT00940000159727 #15 [REVERSED]
> Characiphysae [ANCESTRALSPECIES]
>> CHROMOSOME 47
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b #14 TO ENSGT00940000159727.a #15
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727.b #15
> Characiphysae_b [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727.b #15
>> CHROMOSOME 40
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b #14 TO ENSGT00940000159727.a #15
> Electric eel [MODERNSPECIES]
>> CHROMOSOME 83
SYNTENIC BLOCK FROM pax1a (ENSEEEG00000022400) #14 TO nkx2.2a (ENSEEEG00000022398) #15 [REVERSED]
>> CHROMOSOME 45
SYNTENIC BLOCK FROM PAX1 (ENSEEEG00000009617) #14 TO nkx2.2b (ENSEEEG00000009615) #15 [REVERSED]
> Characoidei [ANCESTRALSPECIES]
>> CHROMOSOME 48
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b #14 TO ENSGT00940000159727.a.a #15 [REVERSED]
>> CHROMOSOME 32
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727.b #15
> Mexicana tetra [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM PAX1 (ENSAMXG00000018287) #14 TO NKX2-2 (ENSAMXG00000041974) #15 [REVERSED]
> Red-bellied piranha [MODERNSPECIES]
>> CHROMOSOME 192
SYNTENIC BLOCK FROM pax1a (ENSPNAG00000015602) #14 TO nkx2.2a (ENSPNAG00000015582) #15
>> CHROMOSOME 40
SYNTENIC BLOCK FROM PAX1 (ENSPNAG00000010858) #14 TO ENSPNAG00000010874 #15 [REVERSED]
> Channel catfish [MODERNSPECIES]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM pax1 (ENSIPUG00000024359) #14 TO nkx2.2a (ENSIPUG00000024361) #15
> Cyprinoidei [ANCESTRALSPECIES]
>> CHROMOSOME 118
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Cyprininae [ANCESTRALSPECIES]
>> CHROMOSOME 457
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.g.a #14 TO ENSGT00940000159727.d.a.b #15 [REVERSED]
>> CHROMOSOME 722
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.g.b #14 TO ENSGT00940000159727.d.a.a #15
>> CHROMOSOME 517
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000159137.b.b.a.b #8 AND ENSGT00940000159727.c #20
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 766
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.a.a #14 TO ENSGT00940000159727.d.b.a #15
> Cyprininae_a [ANCESTRALSPECIES]
>> CHROMOSOME 609
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.h #14 TO ENSGT00940000159727.c #15
>> CHROMOSOME 472
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.g.a #14 TO ENSGT00940000159727.d.a.b #15 [REVERSED]
>> CHROMOSOME 289
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.a.a #14 TO ENSGT00940000159727.d.b.a #15
>> CHROMOSOME 675
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.g.b #14 TO ENSGT00940000159727.d.a.a #15
>> CHROMOSOME 142
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.a.b #14 TO ENSGT00940000159727.d.b.b #15
> Golden-line barbel [MODERNSPECIES]
>> CHROMOSOME 672
SYNTENIC BLOCK FROM PAX1 (ENSSGRG00000001737) #14 TO nkx2.2b (ENSSGRG00000001735) #15 [REVERSED]
>> CHROMOSOME 640
SYNTENIC BLOCK FROM pax1a (ENSSGRG00000031185) #14 TO nkx2.2a (ENSSGRG00000031184) #15 [REVERSED]
>> CHROMOSOME 644
SYNTENIC BLOCK FROM pax1a (ENSSGRG00000044210) #14 TO nkx2.2a (ENSSGRG00000044205) #15 [REVERSED]
>> CHROMOSOME 346
SYNTENIC BLOCK FROM PAX1 (ENSSGRG00000027793) #14 TO nkx2.2b (ENSSGRG00000027794) #15
> Common carp reference [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM pax1a (ENSCCRG00000005066) #14 TO nkx2.2a (ENSCCRG00000005090) #15
>> CHROMOSOME 34
SYNTENIC BLOCK FROM PAX1 (ENSCCRG00000034722) #14 TO nkx2.2b (ENSCCRG00000012145) #15 [REVERSED]
>> CHROMOSOME 30
SYNTENIC BLOCK FROM pax1a (ENSCCRG00000069776) #14 TO nkx2.2a (ENSCCRG00000006430) #15 [REVERSED]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM PAX1 (ENSCCRG00000041349) #14 TO nkx2.2b (ENSCCRG00000041579) #15
> Goldfish [MODERNSPECIES]
>> CHROMOSOME 36
 [REVERSED]
DISTANT LINK BETWEEN pax1a (ENSCARG00000069613) #30 AND nkx2.2a (ENSCARG00000069607) #32
 [REVERSED]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM PAX1 (ENSCARG00000052815) #14 TO nkx2.2b (ENSCARG00000052799) #15 [REVERSED]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM pax1a (ENSCARG00000038198) #14 TO nkx2.2a (ENSCARG00000038237) #15
>> CHROMOSOME 2903
SYNTENIC BLOCK FROM PAX1 (ENSCARG00000048527) #14 TO nkx2.2b (ENSCARG00000048534) #15
> Zebrafish [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM pax1a (ENSDARG00000008203) #14 TO nkx2.2a (ENSDARG00000053298) #15 [REVERSED]
>> CHROMOSOME 12

DISTANT LINK BETWEEN PAX1 (ENSDARG00000073814) #886 AND nkx2.2b (ENSDARG00000101549) #884

> Euteleosteomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 34
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Acanthomorphata [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Cod [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM pax1a (ENSGMOG00000018913) #14 TO nkx2.2a (ENSGMOG00000034299) #15
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGMOG00000033928 #14 TO nkx2.2b (ENSGMOG00000028363) #15 [REVERSED]
> Euacanthomorphacea [ANCESTRALSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Pinecone sodierfish [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSMMDG00005011249 #14 TO nkx2.2b (ENSMMDG00005011246) #15 [REVERSED]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM pax1a (ENSMMDG00005021815) #14 TO nkx2.2a (ENSMMDG00005021812) #15 [REVERSED]
> Percomorphaceae [ANCESTRALSPECIES]
>> CHROMOSOME 26
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Tiger tail seahorse [MODERNSPECIES]
>> CHROMOSOME 34
SYNTENIC BLOCK FROM pax1a (ENSHCOG00000015849) #14 TO nkx2.2a (ENSHCOG00000015830) #15
> Percomorphaceae_B [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Ovalentaria [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Atherinomorphae [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Cyprinodontiformes [ANCESTRALSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Cyprinodontoidei [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> NAME_4 [ANCESTRALSPECIES]
>> CHROMOSOME 56
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Mummichog [MODERNSPECIES]
>> CHROMOSOME 2192
SYNTENIC BLOCK FROM pax1a (ENSFHEG00000008122) #14 TO nkx2.2a (ENSFHEG00000008113) #15
> Sheepshead minnow [MODERNSPECIES]
>> CHROMOSOME 139
SYNTENIC BLOCK FROM pax1a (ENSCVAG00000008970) #14 TO nkx2.2a (ENSCVAG00000008954) #15
> Poeciliinae [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Platyfish [MODERNSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM pax1a (ENSXMAG00000019114) #14 TO nkx2.2a (ENSXMAG00000019112) #15
> Poecilia [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> NAME_6 [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Sailfin molly [MODERNSPECIES]
>> CHROMOSOME 311
SYNTENIC BLOCK FROM pax1a (ENSPLAG00000018609) #14 TO nkx2.2a (ENSPLAG00000018622) #15 [REVERSED]
> Amazon molly [MODERNSPECIES]
>> CHROMOSOME 282
SYNTENIC BLOCK FROM pax1a (ENSPFOG00000003208) #14 TO nkx2.2a (ENSPFOG00000003195) #15 [REVERSED]
> Guppy [MODERNSPECIES]
>> CHROMOSOME 453
SYNTENIC BLOCK FROM pax1a (ENSPREG00000000940) #14 TO nkx2.2a (ENSPREG00000000967) #15
> Aplocheiloidei [ANCESTRALSPECIES]
>> CHROMOSOME 61
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Turquoise killifish [MODERNSPECIES]
>> CHROMOSOME 1625
SYNTENIC BLOCK FROM pax1a (ENSNFUG00015022542) #14 TO nkx2.2a (ENSNFUG00015022541) #15 [REVERSED]
> Mangrove rivulus [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM pax1a (ENSKMAG00000013005) #14 TO nkx2.2a (ENSKMAG00000013035) #15
> Oryzias [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Oryzias_a [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Chinese medaka [MODERNSPECIES]
>> CHROMOSOME 1014
SYNTENIC BLOCK FROM pax1a (ENSOSIG00000006863) #14 TO nkx2.2a (ENSOSIG00000006865) #15
> Japanese Medaka HdrR [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM pax1a (ENSORLG00000017412) #14 TO nkx2.2a (ENSORLG00000030199) #15
> Oryzias_b [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Javanese ricefish [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM pax1a (ENSOJAG00000022096) #14 TO nkx2.2a (ENSOJAG00000022089) #15 [REVERSED]
> Indian medaka [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM pax1a (ENSOMEG00000015166) #14 TO nkx2.2a (ENSOMEG00000015121) #15
> Ovalentaria_B [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Cichlidae [ANCESTRALSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Pseudocrenilabrinae [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Pseudocrenilabrinae_A [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Haplochromini [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Haplochromini_A [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Haplochromini_B [ANCESTRALSPECIES]
>> CHROMOSOME 37
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Zebra mbuna [MODERNSPECIES]
>> CHROMOSOME 3
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 1101
SYNTENIC BLOCK FROM pax1a (ENSMZEG00005005848) #14 TO nkx2.2a (ENSMZEG00005005857) #15
> Eastern happy [MODERNSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM pax1a (ENSACLG00000019122) #14 TO nkx2.2a (ENSACLG00000019131) #15
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSACLG00000010450 #14 TO nkx2.2b (ENSACLG00000010492) #15
> P. nyererei [MODERNSPECIES]
>> CHROMOSOME 383
SYNTENIC BLOCK FROM pax1a (ENSPNYG00000007017) #14 TO nkx2.2a (ENSPNYG00000006989) #15 [REVERSED]
>> CHROMOSOME 343
SYNTENIC BLOCK FROM ENSPNYG00000001573 #14 TO nkx2.2b (ENSPNYG00000001616) #15
> Burton s mouthbrooder [MODERNSPECIES]
>> CHROMOSOME 381
SYNTENIC BLOCK FROM ENSHBUG00000004973 #14 TO nkx2.2b (ENSHBUG00000004988) #15 [REVERSED]
>> CHROMOSOME 317
SYNTENIC BLOCK FROM pax1a (ENSHBUG00000019749) #14 TO nkx2.2a (ENSHBUG00000000588) #15 [REVERSED]
> Lyretail cichlid [MODERNSPECIES]
>> CHROMOSOME 363
SYNTENIC BLOCK FROM pax1a (ENSNBRG00000009280) #14 TO nkx2.2a (ENSNBRG00000009305) #15
> Nile tilapia [MODERNSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSONIG00000018717 #14 TO nkx2.2b (ENSONIG00000018719) #15
>> CHROMOSOME 10
SYNTENIC BLOCK FROM pax1a (ENSONIG00000008137) #14 TO nkx2.2a (ENSONIG00000008139) #15 [REVERSED]
> Midas cichlid [MODERNSPECIES]
>> CHROMOSOME 275
SYNTENIC BLOCK FROM ENSACIG00000014922 #14 TO nkx2.2b (ENSACIG00000014940) #15
>> CHROMOSOME 612
SYNTENIC BLOCK FROM pax1a (ENSACIG00000014691) #14 TO nkx2.2a (ENSACIG00000014702) #15
> Pomacentridae [ANCESTRALSPECIES]
>> CHROMOSOME 104
SYNTENIC BLOCK FROM ENSGT00940000159137.a #14 TO ENSGT00940000159727 #15
> Pomacentridae_A [ANCESTRALSPECIES]
>> CHROMOSOME 102
SYNTENIC BLOCK FROM ENSGT00940000159137.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Amphiprion [ANCESTRALSPECIES]
>> CHROMOSOME 202
SYNTENIC BLOCK FROM ENSGT00940000159137.a #14 TO ENSGT00940000159727 #15
> Orange clownfish [MODERNSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM pax1a (ENSAPEG00000019868) #14 TO nkx2.2a (ENSAPEG00000019829) #15 [REVERSED]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSAPEG00000014701 #14 TO nkx2.2b (ENSAPEG00000014723) #15
> Clown anemonefish [MODERNSPECIES]
>> CHROMOSOME 2231
SYNTENIC BLOCK FROM ENSAOCG00000001689 #14 TO nkx2.2b (ENSAOCG00000023580) #15 [REVERSED]
> Spiny chromis [MODERNSPECIES]
>> CHROMOSOME 202
SYNTENIC BLOCK FROM ENSAPOG00000009922 #14 TO nkx2.2b (ENSAPOG00000009832) #15
>> CHROMOSOME 132
SYNTENIC BLOCK FROM pax1a (ENSAPOG00000001148) #14 TO nkx2.2a (ENSAPOG00000001149) #15 [REVERSED]
> Bicolor damselfish [MODERNSPECIES]
>> CHROMOSOME 1001
SYNTENIC BLOCK FROM ENSSPAG00000015903 #14 TO nkx2.2b (ENSSPAG00000015916) #15
>> CHROMOSOME 587
SYNTENIC BLOCK FROM pax1a (ENSSPAG00000008863) #14 TO nkx2.2a (ENSSPAG00000008873) #15
> Percomorphaceae_C [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Percomorphaceae_D [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Carangaria [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Pleuronectoidei [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Tongue sole [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM pax1a (ENSCSEG00000000059) #14 TO nkx2.2a (ENSCSEG00000000058) #15 [REVERSED]
> Turbot [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM pax1a (ENSSMAG00000008529) #14 TO nkx2.2a (ENSSMAG00000008547) #15
> Carangaria_A [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Barramundi perch [MODERNSPECIES]
>> CHROMOSOME 446
SYNTENIC BLOCK FROM ENSLCAG00010025010 #14 TO nkx2.2b (ENSLCAG00010025013) #15
>> CHROMOSOME 129
SYNTENIC BLOCK FROM pax1a (ENSLCAG00010014046) #14 TO nkx2.2a (ENSLCAG00010014040) #15 [REVERSED]
> Seriola [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Greater amberjack [MODERNSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSSDUG00000012999 #14 TO nkx2.2b (ENSSDUG00000012989) #15 [REVERSED]
>> CHROMOSOME 62
SYNTENIC BLOCK FROM pax1a (ENSSDUG00000012243) #14 TO nkx2.2a (ENSSDUG00000012256) #15
> Yellowtail amberjack [MODERNSPECIES]
>> CHROMOSOME 2829
SYNTENIC BLOCK FROM pax1a (ENSSLDG00000011035) #14 TO nkx2.2a (ENSSLDG00000011018) #15 [REVERSED]
>> CHROMOSOME 3234
SYNTENIC BLOCK FROM ENSSLDG00000021238 #14 TO nkx2.2b (ENSSLDG00000021256) #15
> Anabantaria [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Zig-zag eel [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM pax1a (ENSMAMG00000009767) #14 TO nkx2.2a (ENSMAMG00000009772) #15
> Anabantoidei [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Climbing perch [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM pax1a (ENSATEG00000007213) #14 TO nkx2.2a (ENSATEG00000029056) #15
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSATEG00000001430 #14 TO nkx2.2b (ENSATEG00000001390) #15 [REVERSED]
> Siamese fighting fish [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSBSLG00000011001 #14 TO nkx2.2b (ENSBSLG00000010992) #15 [REVERSED]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM pax1a (ENSBSLG00000026207) #14 TO nkx2.2a (ENSBSLG00000026218) #15
> Eupercaria [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Tetraodontidae [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Tetraodon [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM pax1a (ENSTNIG00000016891) #14 TO nkx2.2a (ENSTNIG00000016892) #15
> Fugu [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM pax1a (ENSTRUG00000008079) #14 TO nkx2.2a (ENSTRUG00000007981) #15
> Eupecaria_A [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Ballan wrasse [MODERNSPECIES]
>> CHROMOSOME 230
SYNTENIC BLOCK FROM pax1a (ENSLBEG00000012753) #14 TO nkx2.2a (ENSLBEG00000012780) #15
>> CHROMOSOME 639
SYNTENIC BLOCK FROM ENSLBEG00000023356 #14 TO nkx2.2b (ENSLBEG00000023321) #15 [REVERSED]
> Eupecaria_B [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Eupecaria_C [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Eupercaria_incertae_sedis [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> European seabass [MODERNSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM pax1a (ENSDLAG00005001148) #14 TO nkx2.2a (ENSDLAG00005001143) #15 [REVERSED]
> Large yellow croaker [MODERNSPECIES]
>> CHROMOSOME 495
SYNTENIC BLOCK FROM pax1a (ENSLCRG00005022710) #14 TO nkx2.2a (ENSLCRG00005022711) #15
> Gilthead seabream [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSSAUG00010018493 #14 TO nkx2.2b (ENSSAUG00010018492) #15 [REVERSED]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM pax1a (ENSSAUG00010025120) #14 TO nkx2.2a (ENSSAUG00010025123) #15
> Perciformes [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Cottioidei [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Lumpfish [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM pax1a (ENSCLMG00005009310) #14 TO nkx2.2a (ENSCLMG00005009309) #15 [REVERSED]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSCLMG00005011754 #14 TO nkx2.2b (ENSCLMG00005011755) #15
> Stickleback [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM pax1a (ENSGACG00000006987) #14 TO nkx2.2a (ENSGACG00000006996) #15
> Perciformes_a [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Pike perch [MODERNSPECIES]
>> CHROMOSOME 79
SYNTENIC BLOCK FROM pax1a (ENSSLUG00000023923) #14 TO nkx2.2a (ENSSLUG00000023930) #15
>> CHROMOSOME 95

DISTANT LINK BETWEEN ENSSLUG00000015842 #10 AND nkx2.2b (ENSSLUG00000015864) #8

> Channel bull blenny [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM pax1a (ENSCGOG00000008126) #14 TO nkx2.2a (ENSCGOG00000008133) #15
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSCGOG00000018651 #14 TO nkx2.2b (ENSCGOG00000018649) #15 [REVERSED]
> Protacanthopterygii [ANCESTRALSPECIES]
>> CHROMOSOME 35
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15
> Salmoninae [ANCESTRALSPECIES]
>> CHROMOSOME 402
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.d #14 TO ENSGT00940000159727.k.b #15 [REVERSED]
>> CHROMOSOME 152
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.c #14 TO ENSGT00940000159727.k.a #15 [REVERSED]
>> CHROMOSOME 162
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.f #14 TO ENSGT00940000159727.l #15
> Salmoninae_a [ANCESTRALSPECIES]
>> CHROMOSOME 36
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.e #14 TO ENSGT00940000159727.l.a.a #15 [REVERSED]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.c #14 TO ENSGT00940000159727.k.a #15 [REVERSED]
>> CHROMOSOME 42
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.d #14 TO ENSGT00940000159727.k.b #15
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.f #14 TO ENSGT00940000159727.l.b.b #15
> Oncorhynchus [ANCESTRALSPECIES]
>> CHROMOSOME 25
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.c #14 TO ENSGT00940000159727.k.a #15
>> CHROMOSOME 36
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.e #14 TO ENSGT00940000159727.l.a.a #15
>> CHROMOSOME 35
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.d #14 TO ENSGT00940000159727.k.b #15
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.f #14 TO ENSGT00940000159727.l.b.b #15 [REVERSED]
> Rainbow trout [MODERNSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM pax1a (ENSOMYG00000038906) #14 TO nkx2.2a (ENSOMYG00000038942) #15
>> CHROMOSOME 29
SYNTENIC BLOCK FROM PAX1 (ENSOMYG00000043833) #14 TO nkx2.2b (ENSOMYG00000043836) #15
>> CHROMOSOME 10
SYNTENIC BLOCK FROM pax1a (ENSOMYG00000033650) #14 TO nkx2.2a (ENSOMYG00000033637) #15 [REVERSED]
>> CHROMOSOME 25
SYNTENIC BLOCK FROM PAX1 (ENSOMYG00000011229) #14 TO nkx2.2b (ENSOMYG00000011245) #15
> Oncorhynchus_a [ANCESTRALSPECIES]
>> CHROMOSOME 33
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.e #14 TO ENSGT00940000159727.l.a.a #15 [REVERSED]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.f #14 TO ENSGT00940000159727.l.b.b #15
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.c #14 TO ENSGT00940000159727.k.a #15
>> CHROMOSOME 53
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.d #14 TO ENSGT00940000159727.k.b #15
> Chinook salmon [MODERNSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM PAX1 (ENSOTSG00005016931) #14 TO nkx2.2b (ENSOTSG00005016932) #15
>> CHROMOSOME 32
SYNTENIC BLOCK FROM pax1a (ENSOTSG00005017607) #14 TO nkx2.2a (ENSOTSG00005017608) #15
>> CHROMOSOME 2
SYNTENIC BLOCK FROM pax1a (ENSOTSG00005000943) #14 TO NKX2-2 (ENSOTSG00005000937) #15 [REVERSED]
>> CHROMOSOME 29
SYNTENIC BLOCK FROM PAX1 (ENSOTSG00005040309) #14 TO nkx2.2b (ENSOTSG00005040312) #15
> Coho salmon [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM PAX1 (ENSOKIG00005003462) #14 TO nkx2.2b (ENSOKIG00005003473) #15
>> CHROMOSOME 13
SYNTENIC BLOCK FROM PAX1 (ENSOKIG00005042225) #14 TO nkx2.2b (ENSOKIG00005042283) #15
>> CHROMOSOME 5
SYNTENIC BLOCK FROM pax1a (ENSOKIG00005037755) #14 TO nkx2.2a (ENSOKIG00005037708) #15 [REVERSED]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM pax1a (ENSOKIG00005033872) #14 TO NKX2-2 (ENSOKIG00005033837) #15 [REVERSED]
> Salmo [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.e #14 TO ENSGT00940000159727.l.b.a #15
>> CHROMOSOME 26
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.d #14 TO ENSGT00940000159727.k.b #15
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a.f #14 TO ENSGT00940000159727.l.b.b #15
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00940000159137.b.b.c #14 TO ENSGT00940000159727.k.a #15
> River trout [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM PAX1 (ENSSTUG00000026174) #14 TO nkx2.2b (ENSSTUG00000026165) #15 [REVERSED]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM pax1a (ENSSTUG00000050005) #14 TO nkx2.2a (ENSSTUG00000049999) #15 [REVERSED]
>> CHROMOSOME 26
SYNTENIC BLOCK FROM pax1a (ENSSTUG00000027380) #14 TO nkx2.2a (ENSSTUG00000027367) #15 [REVERSED]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM PAX1 (ENSSTUG00000034048) #14 TO nkx2.2b (ENSSTUG00000034037) #15 [REVERSED]
> Atlantic salmon [MODERNSPECIES]
>> CHROMOSOME 25
SYNTENIC BLOCK FROM PAX1 (ENSSSAG00000109984) #14 TO nkx2.2b (ENSSSAG00000116039) #15
>> CHROMOSOME 6
SYNTENIC BLOCK FROM PAX1 (ENSSSAG00000101257) #14 TO nkx2.2b (ENSSSAG00000089576) #15
>> CHROMOSOME 28
SYNTENIC BLOCK FROM pax1a (ENSSSAG00000043378) #14 TO nkx2-2 (ENSSSAG00000043447) #15
>> CHROMOSOME 0
SYNTENIC BLOCK FROM pax1a (ENSSSAG00000000114) #14 TO nx22a (ENSSSAG00000000142) #15
> Huchen [MODERNSPECIES]
>> CHROMOSOME 999
SYNTENIC BLOCK FROM PAX1 (ENSHHUG00000046766) #14 TO nkx2.2b (ENSHHUG00000046770) #15
>> CHROMOSOME 293
SYNTENIC BLOCK FROM pax1a (ENSHHUG00000007815) #14 TO NKX2-2 (ENSHHUG00000007835) #15
>> CHROMOSOME 50
SYNTENIC BLOCK FROM PAX1 (ENSHHUG00000024814) #14 TO nkx2.2b (ENSHHUG00000024821) #15
>> CHROMOSOME 1671
SYNTENIC BLOCK FROM pax1a (ENSHHUG00000048887) #14 TO nkx2.2a (ENSHHUG00000048910) #15
> Northern pike [MODERNSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM PAX1 (ENSELUG00000000549) #14 TO nkx2.2b (ENSELUG00000015194) #15
>> CHROMOSOME 14
SYNTENIC BLOCK FROM pax1a (ENSELUG00000002926) #14 TO nkx2.2a (ENSELUG00000002941) #15
> Osteoglossiformes [ANCESTRALSPECIES]
>> CHROMOSOME 161
SYNTENIC BLOCK FROM ENSGT00940000159137.b.a #14 TO ENSGT00940000159727 #15 [REVERSED]
> Asian bonytongue [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM pax1a (ENSSFOG00015001264) #14 TO nkx2.2b (ENSSFOG00015025712) #15
>> CHROMOSOME 6
SYNTENIC BLOCK FROM pax1a (ENSSFOG00015009264) #14 TO nkx2.2a (ENSSFOG00015027933) #15 [REVERSED]
> P. kingsleyae [MODERNSPECIES]
>> CHROMOSOME 373
SYNTENIC BLOCK FROM PAX1 (ENSPKIG00000016833) #14 TO nkx2.2a (ENSPKIG00000016859) #15
>> CHROMOSOME 120
SYNTENIC BLOCK FROM pax1a (ENSPKIG00000021462) #14 TO nkx2.2a (ENSPKIG00000021491) #15
> Elephant shark [MODERNSPECIES]
>> CHROMOSOME 1546
SYNTENIC BLOCK FROM pax1a (ENSCMIG00000018735) #14 TO nkx2.2a (ENSCMIG00000018730) #15 [REVERSED]
> Cyclostomata [ANCESTRALSPECIES]
> Lamprey [MODERNSPECIES]
> Hagfish [MODERNSPECIES]
>> CHROMOSOME 1162

DISTANT LINK BETWEEN pax1a (ENSEBUG00000007079) #3 AND NKX2-2 (ENSEBUG00000005448) #1

> Ciona [ANCESTRALSPECIES]
> Ciona intestinalis [MODERNSPECIES]
> Ciona savignyi [MODERNSPECIES]
> Ecdysozoa [ANCESTRALSPECIES]
> Caenorhabditis elegans [MODERNSPECIES]
> Fruitfly [MODERNSPECIES]
> Yeast [MODERNSPECIES]