> Boreoeutheria [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Euarchontoglires [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Euarchontoglires_A [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Tree shrew [REFERENCESPECIES]
>> CHROMOSOME 2866
SYNTENIC BLOCK FROM JAK1 (ENSTBEG00000001100) #15 TO CACHD1 (ENSTBEG00000008024) #17 [REVERSED]
> Glires [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Lagomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Pika [MODERNSPECIES]
>> CHROMOSOME 2673
SYNTENIC BLOCK FROM JAK1 (ENSOPRG00000017004) #15 TO ENSOPRG00000016988 #16 [REVERSED]
> Rabbit [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM JAK1 (ENSOCUG00000006227) #15 TO CACHD1 (ENSOCUG00000015532) #17
> Rodentia [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Rodentia_A [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Hystricomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 44
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Hystricomorpha_a [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Guinea pig [MODERNSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM JAK1 (ENSCPOG00000005991) #15 TO CACHD1 (ENSCPOG00000011700) #17
> Hystricomorpha_b [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Degu [MODERNSPECIES]
>> CHROMOSOME 98
SYNTENIC BLOCK FROM JAK1 (ENSODEG00000004472) #15 TO CACHD1 (ENSODEG00000004991) #17 [REVERSED]
> Long-tailed chinchilla [MODERNSPECIES]
>> CHROMOSOME 130
SYNTENIC BLOCK FROM JAK1 (ENSCLAG00000006227) #15 TO CACHD1 (ENSCLAG00000007901) #17
> Naked mole-rat female [MODERNSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM JAK1 (ENSHGLG00000018566) #15 TO RAVER2 (ENSHGLG00000018409) #16
DISTANT LINK BETWEEN RAVER2 (ENSHGLG00000018409) #640 AND CACHD1 (ENSHGLG00000018425) #638

> Sciuridae [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Eurasian red squirrel [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSSVLG00005010529) #15 TO CACHD1 (ENSSVLG00005008345) #17 [REVERSED]
> Marmotini [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Alpin marmot [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM JAK1 (ENSMMMG00000013495) #15 TO CACHD1 (ENSMMMG00000013619) #17
> Marmotini_b [ANCESTRALSPECIES]
>> CHROMOSOME 206
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Squirrel [MODERNSPECIES]
>> CHROMOSOME 292
SYNTENIC BLOCK FROM JAK1 (ENSSTOG00000012422) #15 TO CACHD1 (ENSSTOG00000009821) #17 [REVERSED]
> Arctic ground squirrel [MODERNSPECIES]
>> CHROMOSOME 477
SYNTENIC BLOCK FROM JAK1 (ENSUPAG00010008239) #15 TO CACHD1 (ENSUPAG00010008160) #17 [REVERSED]
> Rodentia_B [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 55
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 746
SYNTENIC BLOCK FROM Jak1 (ENSNGAG00000008128) #15 TO Cachd1 (ENSNGAG00000018544) #17
> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Rat [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM Jak1 (ENSRNOG00000011157) #15 TO Cachd1 (ENSRNOG00000010514) #17 [REVERSED]
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000158648 #16 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158648 #487 AND ENSGT00940000157568 #489
 [REVERSED]
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM Jak1 (MGP_PahariEiJ_G0028540) #15 TO Raver2 (MGP_PahariEiJ_G0028539) #16 [REVERSED]
DISTANT LINK BETWEEN Raver2 (MGP_PahariEiJ_G0028539) #227 AND Cachd1 (MGP_PahariEiJ_G0028537) #229
 [REVERSED]
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000158648 #16
DISTANT LINK BETWEEN ENSGT00940000158648 #754 AND ENSGT00940000157568 #752

> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM Jak1 (MGP_CAROLIEiJ_G0026203) #15 TO Raver2 (MGP_CAROLIEiJ_G0026202) #16 [REVERSED]
DISTANT LINK BETWEEN Raver2 (MGP_CAROLIEiJ_G0026202) #420 AND Cachd1 (MGP_CAROLIEiJ_G0026200) #422
 [REVERSED]
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000158648 #16
DISTANT LINK BETWEEN ENSGT00940000158648 #756 AND ENSGT00940000157568 #754

> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000158648 #16
DISTANT LINK BETWEEN ENSGT00940000158648 #751 AND ENSGT00940000157568 #749

> spretus [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM Jak1 (MGP_SPRETEiJ_G0027172) #15 TO Raver2 (MGP_SPRETEiJ_G0027171) #16 [REVERSED]
DISTANT LINK BETWEEN Raver2 (MGP_SPRETEiJ_G0027171) #437 AND Cachd1 (MGP_SPRETEiJ_G0027169) #439
 [REVERSED]
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 2743
SYNTENIC BLOCK FROM Jak1 (ENSMSIG00000032175) #15 TO Raver2 (ENSMSIG00000032177) #16
DISTANT LINK BETWEEN Raver2 (ENSMSIG00000032177) #3 AND Cachd1 (ENSMSIG00000032180) #1

> Mouse [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM Jak1 (ENSMUSG00000028530) #15 TO Cachd1 (ENSMUSG00000028532) #17 [REVERSED]
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM Jak1 (ENSPEMG00000004628) #15 TO Cachd1 (ENSPEMG00000018442) #17 [REVERSED]
> Prairie vole [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM Jak1 (ENSMOCG00000011865) #15 TO Cachd1 (ENSMOCG00000020004) #17 [REVERSED]
> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Chinese hamster chok1gshd [MODERNSPECIES]
>> CHROMOSOME 111
SYNTENIC BLOCK FROM Jak1 (ENSCGRG00001008727) #15 TO Cachd1 (ENSCGRG00001024125) #17
> Golden Hamster [MODERNSPECIES]
>> CHROMOSOME 849
SYNTENIC BLOCK FROM Jak1 (ENSMAUG00000010024) #15 TO Cachd1 (ENSMAUG00000000758) #17 [REVERSED]
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 98
SYNTENIC BLOCK FROM Jak1 (ENSJJAG00000022247) #15 TO Raver2 (ENSJJAG00000000374) #16
DISTANT LINK BETWEEN Raver2 (ENSJJAG00000000374) #4 AND Cachd1 (ENSJJAG00000007547) #2

> Kangaroo rat [MODERNSPECIES]
>> CHROMOSOME 370
SYNTENIC BLOCK FROM Jak1 (ENSDORG00000013462) #15 TO Cachd1 (ENSDORG00000011104) #17 [REVERSED]
> Primates [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Haplorrhini [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Simiiformes [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Catarrhini [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cercopithecidae [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cercopithecinae [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cercopithecinae_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cercopithecinae_b [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Olive baboon [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSPANG00000001284) #15 TO CACHD1 (ENSPANG00000010808) #17 [REVERSED]
> Cercopithecinae_d [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Drill [MODERNSPECIES]
>> CHROMOSOME 923
SYNTENIC BLOCK FROM JAK1 (ENSMLEG00000038239) #15 TO CACHD1 (ENSMLEG00000041842) #17 [REVERSED]
> Sooty mangabey [MODERNSPECIES]
>> CHROMOSOME 238
SYNTENIC BLOCK FROM JAK1 (ENSCATG00000041174) #15 TO RAVER2 (ENSCATG00000040658) #16
DISTANT LINK BETWEEN RAVER2 (ENSCATG00000040658) #75 AND CACHD1 (ENSCATG00000036728) #73

> Macaca [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Pig-tailed macaque [MODERNSPECIES]
>> CHROMOSOME 266
SYNTENIC BLOCK FROM JAK1 (ENSMNEG00000008188) #15 TO CACHD1 (ENSMNEG00000030755) #17
> Macaca_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Crab-eating macaque [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSMFAG00000003493) #15 TO CACHD1 (ENSMFAG00000037670) #17
> Rhesus [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSMMUG00000018566) #15 TO RAVER2 (ENSMMUG00000018565) #16
DISTANT LINK BETWEEN RAVER2 (ENSMMUG00000018565) #1338 AND CACHD1 (ENSMMUG00000007577) #1336

> Vervet Monkey [MODERNSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM JAK1 (ENSCSAG00000001351) #15 TO CACHD1 (ENSCSAG00000001349) #17
> Rhinopithecus [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Black snub-nosed monkey [MODERNSPECIES]
>> CHROMOSOME 569
SYNTENIC BLOCK FROM JAK1 (ENSRBIG00000010792) #15 TO CACHD1 (ENSRBIG00000044274) #17
> Golden snub-nosed monkey [MODERNSPECIES]
>> CHROMOSOME 1530
SYNTENIC BLOCK FROM JAK1 (ENSRROG00000043516) #15 TO CACHD1 (ENSRROG00000045428) #17 [REVERSED]
> Hominoidea [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Hominidae [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Orangutan [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSPPYG00000001270) #15 TO CACHD1 (ENSPPYG00000001272) #17
> Homo/Pan/Gorilla group [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Gorilla [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSGGOG00000016456) #15 TO CACHD1 (ENSGGOG00000007691) #17 [REVERSED]
> Homo/Pan group [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Pan [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Chimpanzee [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSPTRG00000000825) #15 TO CACHD1 (ENSPTRG00000000823) #17 [REVERSED]
> Bonobo [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSPPAG00000015344) #15 TO CACHD1 (ENSPPAG00000012742) #17 [REVERSED]
> Human [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSG00000162434) #15 TO CACHD1 (ENSG00000158966) #17 [REVERSED]
> Gibbon [MODERNSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM JAK1 (ENSNLEG00000015149) #15 TO CACHD1 (ENSNLEG00000015119) #17 [REVERSED]
> Platyrrhini [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cebidae [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Marmoset [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM JAK1 (ENSCJAG00000016743) #15 TO CACHD1 (ENSCJAG00000016656) #17 [REVERSED]
> Cebidae_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Bolivian squirrel monkey [MODERNSPECIES]
>> CHROMOSOME 45
SYNTENIC BLOCK FROM JAK1 (ENSSBOG00000024631) #15 TO CACHD1 (ENSSBOG00000028299) #17
> Capuchin [MODERNSPECIES]
>> CHROMOSOME 135
SYNTENIC BLOCK FROM JAK1 (ENSCCAG00000021638) #15 TO CACHD1 (ENSCCAG00000023418) #17
> Mas night monkey [MODERNSPECIES]
>> CHROMOSOME 1222
 [REVERSED]
DISTANT LINK BETWEEN JAK1 (ENSANAG00000036647) #71 AND RAVER2 (ENSANAG00000025857) #73
SYNTENIC BLOCK FROM RAVER2 (ENSANAG00000025857) #16 TO CACHD1 (ENSANAG00000033660) #17 [REVERSED]
> Tarsier [MODERNSPECIES]
>> CHROMOSOME 4856
 [REVERSED]
DISTANT LINK BETWEEN JAK1 (ENSTSYG00000006932) #8 AND RAVER2 (ENSTSYG00000006019) #10
SYNTENIC BLOCK FROM RAVER2 (ENSTSYG00000006019) #16 TO CACHD1 (ENSTSYG00000014674) #17 [REVERSED]
> Strepsirrhini [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Bushbaby [MODERNSPECIES]
>> CHROMOSOME 125
SYNTENIC BLOCK FROM JAK1 (ENSOGAG00000011160) #15 TO CACHD1 (ENSOGAG00000011152) #17
> Lemuriformes [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Mouse lemur [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM JAK1 (ENSMICG00000013750) #15 TO CACHD1 (ENSMICG00000013692) #17 [REVERSED]
> Lemuriformes_a [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Coquerels sifaka [MODERNSPECIES]
>> CHROMOSOME 162
SYNTENIC BLOCK FROM JAK1 (ENSPCOG00000018189) #15 TO CACHD1 (ENSPCOG00000018645) #17
> Greater bamboo lemur [MODERNSPECIES]
>> CHROMOSOME 647
SYNTENIC BLOCK FROM JAK1 (ENSPSMG00000006700) #15 TO CACHD1 (ENSPSMG00000006786) #17
> Laurasiatheria [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Eulipotyphla [ANCESTRALSPECIES]
> Common shrew [MODERNSPECIES]
> Hedgehog [MODERNSPECIES]
> Laurasiatheria_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Artiodactyla [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Suina [ANCESTRALSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Pig [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM JAK1 (ENSSSCG00000003809) #15 TO CACHD1 (ENSSSCG00000004829) #17
> Chacoan peccary [MODERNSPECIES]
>> CHROMOSOME 54
SYNTENIC BLOCK FROM JAK1 (ENSCWAG00000010234) #15 TO CACHD1 (ENSCWAG00000010433) #17
> Artiodactyla_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Camelidae [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Arabian camel [MODERNSPECIES]
>> CHROMOSOME 4
 [REVERSED]
DISTANT LINK BETWEEN JAK1 (ENSCDRG00005004601) #704 AND RAVER2 (ENSCDRG00005004547) #706
SYNTENIC BLOCK FROM RAVER2 (ENSCDRG00005004547) #16 TO CACHD1 (ENSCDRG00005004143) #17 [REVERSED]
> Alpaca [MODERNSPECIES]
>> CHROMOSOME 1360
SYNTENIC BLOCK FROM JAK1 (ENSVPAG00000006184) #15 TO CACHD1 (ENSVPAG00000006179) #17 [REVERSED]
> Artiodactyla_b [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cetacea [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Odontoceti [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Odontoceti_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Dolphin [MODERNSPECIES]
>> CHROMOSOME 1293
SYNTENIC BLOCK FROM JAK1 (ENSTTRG00000009715) #15 TO CACHD1 (ENSTTRG00000009607) #17 [REVERSED]
> Odontoceti_b [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Vaquita [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSPSNG00000003215) #15 TO CACHD1 (ENSPSNG00000003080) #17 [REVERSED]
> Monodontidae [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Narwhal [MODERNSPECIES]
>> CHROMOSOME 304
SYNTENIC BLOCK FROM JAK1 (ENSMMNG00015022067) #15 TO CACHD1 (ENSMMNG00015022069) #17
> Beluga whale [MODERNSPECIES]
>> CHROMOSOME 74
SYNTENIC BLOCK FROM JAK1 (ENSDLEG00000021291) #15 TO CACHD1 (ENSDLEG00000021280) #17 [REVERSED]
> Sperm whale [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM JAK1 (ENSPCTG00005022651) #15 TO CACHD1 (ENSPCTG00005022667) #17
> Blue whale [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSBMSG00010002874) #15 TO CACHD1 (ENSBMSG00010002730) #17 [REVERSED]
> Pecora [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Yarkand deer [MODERNSPECIES]
>> CHROMOSOME 12






> Percora_a [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Siberian musk deer [MODERNSPECIES]
>> CHROMOSOME 339
SYNTENIC BLOCK FROM JAK1 (ENSMMSG00000008290) #15 TO CACHD1 (ENSMMSG00000008645) #17
> Bovidae [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Bovinae [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> American bison [MODERNSPECIES]
>> CHROMOSOME 1735
SYNTENIC BLOCK FROM JAK1 (ENSBBBG00000008822) #15 TO CACHD1 (ENSBBBG00000024020) #17
> Bos [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Bos_b [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Hybrid Bos Indicus [MODERNSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM JAK1 (ENSBIXG00005021985) #15 TO RAVER2 (ENSBIXG00005003691) #16
DISTANT LINK BETWEEN RAVER2 (ENSBIXG00005003691) #792 AND CACHD1 (ENSBIXG00005021823) #790

> Cow [MODERNSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM JAK1 (ENSBTAG00000003147) #15 TO CACHD1 (ENSBTAG00000016455) #17
> Bos_a [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Wild yak [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM JAK1 (ENSBMUG00000002390) #15 TO CACHD1 (ENSBMUG00000002292) #17 [REVERSED]
> Domestic yak [MODERNSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM JAK1 (ENSBGRG00000014206) #15 TO CACHD1 (ENSBGRG00000014987) #17
> Caprinae [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Goat [MODERNSPECIES]
>> CHROMOSOME 22
 [REVERSED]
DISTANT LINK BETWEEN JAK1 (ENSCHIG00000012708) #423 AND RAVER2 (ENSCHIG00000005514) #425
SYNTENIC BLOCK FROM RAVER2 (ENSCHIG00000005514) #16 TO CACHD1 (ENSCHIG00000012365) #17 [REVERSED]
> Rambouillet Sheep [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSOARG00020025959) #15 TO CACHD1 (ENSOARG00020025918) #17 [REVERSED]
> Laurasiatheria_b [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Carnivora [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Caniformia [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Caniformia_b [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Mustelinae [ANCESTRALSPECIES]
>> CHROMOSOME 39
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Ferret [MODERNSPECIES]
>> CHROMOSOME 254
SYNTENIC BLOCK FROM JAK1 (ENSMPUG00000000719) #15 TO CACHD1 (ENSMPUG00000000715) #17 [REVERSED]
> American mink [MODERNSPECIES]
>> CHROMOSOME 57
SYNTENIC BLOCK FROM JAK1 (ENSNVIG00000010400) #15 TO CACHD1 (ENSNVIG00000010295) #17 [REVERSED]
> Ursidae [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Giant Panda [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM JAK1 (ENSAMEG00000014980) #15 TO CACHD1 (ENSAMEG00000015187) #17 [REVERSED]
> Ursus [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Polar bear [MODERNSPECIES]
>> CHROMOSOME 170
SYNTENIC BLOCK FROM JAK1 (ENSUMAG00000008476) #15 TO CACHD1 (ENSUMAG00000008533) #17
> American black bear [MODERNSPECIES]
> Canidae [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Red fox [MODERNSPECIES]
>> CHROMOSOME 179
SYNTENIC BLOCK FROM JAK1 (ENSVVUG00000013996) #15 TO CACHD1 (ENSVVUG00000013980) #17 [REVERSED]
> Canis_lupus [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Dog [MODERNSPECIES]
>> CHROMOSOME 33
SYNTENIC BLOCK FROM JAK1 (ENSCAFG00845004547) #15 TO RAVER2 (ENSCAFG00845004615) #16
DISTANT LINK BETWEEN RAVER2 (ENSCAFG00845004615) #577 AND CACHD1 (ENSCAFG00845004709) #575

> Dingo [MODERNSPECIES]
>> CHROMOSOME 373
SYNTENIC BLOCK FROM JAK1 (ENSCAFG00020018270) #15 TO CACHD1 (ENSCAFG00020018033) #17 [REVERSED]
> Felidae [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Panthera [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Tiger [MODERNSPECIES]
>> CHROMOSOME 311
SYNTENIC BLOCK FROM JAK1 (ENSPTIG00000003605) #15 TO CACHD1 (ENSPTIG00000012920) #17
> Panthera_a [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> leopard [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM JAK1 (ENSPPRG00000022662) #15 TO CACHD1 (ENSPPRG00000023686) #17
> lion [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM JAK1 (ENSPLOG00000007282) #15 TO RAVER2 (ENSPLOG00000007347) #16
DISTANT LINK BETWEEN RAVER2 (ENSPLOG00000007347) #1040 AND CACHD1 (ENSPLOG00000007467) #1038

> Cat [MODERNSPECIES]
>> CHROMOSOME 239
SYNTENIC BLOCK FROM JAK1 (ENSFCAG00000001953) #15 TO CACHD1 (ENSFCAG00000010902) #17 [REVERSED]
> Laurasiatheria_c [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Chiroptera [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Microchiroptera [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Microbat [MODERNSPECIES]
>> CHROMOSOME 1000
SYNTENIC BLOCK FROM JAK1 (ENSMLUG00000007723) #15 TO RAVER2 (ENSMLUG00000007699) #16 [REVERSED]
DISTANT LINK BETWEEN RAVER2 (ENSMLUG00000007699) #18 AND CACHD1 (ENSMLUG00000007663) #20
 [REVERSED]
> Greater horseshoe bat [MODERNSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM JAK1 (ENSRFEG00010003864) #15 TO CACHD1 (ENSRFEG00010003774) #17 [REVERSED]
> Megabat [MODERNSPECIES]
>> CHROMOSOME 1632
SYNTENIC BLOCK FROM JAK1 (ENSPVAG00000007173) #15 TO CACHD1 (ENSPVAG00000007170) #17 [REVERSED]
> Equus [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Horse [MODERNSPECIES]
>> CHROMOSOME 26
SYNTENIC BLOCK FROM JAK1 (ENSECAG00000018673) #15 TO CACHD1 (ENSECAG00000022152) #17
> Donkey [MODERNSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM JAK1 (ENSEASG00005008150) #15 TO CACHD1 (ENSEASG00005008161) #17