> Bilateria [ANCESTRALSPECIES]
> Chordata [ANCESTRALSPECIES]
> Vertebrata [ANCESTRALSPECIES]
> Gnathostomata [ANCESTRALSPECIES]
>> CHROMOSOME 271
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000158648 #16
> Euteleostomi [ANCESTRALSPECIES]
>> CHROMOSOME 61
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Sarcopterygii [ANCESTRALSPECIES]
>> CHROMOSOME 88
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Tetrapoda [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Amniota [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Mammalia [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Theria [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Eutheria [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Boreoeutheria [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Euarchontoglires [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Euarchontoglires_A [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Tree shrew [REFERENCESPECIES]
>> CHROMOSOME 2866
SYNTENIC BLOCK FROM JAK1 (ENSTBEG00000001100) #15 TO CACHD1 (ENSTBEG00000008024) #17 [REVERSED]
> Glires [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Lagomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Pika [MODERNSPECIES]
>> CHROMOSOME 2673
SYNTENIC BLOCK FROM JAK1 (ENSOPRG00000017004) #15 TO ENSOPRG00000016988 #16 [REVERSED]
> Rabbit [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM JAK1 (ENSOCUG00000006227) #15 TO CACHD1 (ENSOCUG00000015532) #17
> Rodentia [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Rodentia_A [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Hystricomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 44
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Hystricomorpha_a [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Guinea pig [MODERNSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM JAK1 (ENSCPOG00000005991) #15 TO CACHD1 (ENSCPOG00000011700) #17
> Hystricomorpha_b [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Degu [MODERNSPECIES]
>> CHROMOSOME 98
SYNTENIC BLOCK FROM JAK1 (ENSODEG00000004472) #15 TO CACHD1 (ENSODEG00000004991) #17 [REVERSED]
> Long-tailed chinchilla [MODERNSPECIES]
>> CHROMOSOME 130
SYNTENIC BLOCK FROM JAK1 (ENSCLAG00000006227) #15 TO CACHD1 (ENSCLAG00000007901) #17
> Naked mole-rat female [MODERNSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM JAK1 (ENSHGLG00000018566) #15 TO RAVER2 (ENSHGLG00000018409) #16
DISTANT LINK BETWEEN RAVER2 (ENSHGLG00000018409) #640 AND CACHD1 (ENSHGLG00000018425) #638

> Sciuridae [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Eurasian red squirrel [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSSVLG00005010529) #15 TO CACHD1 (ENSSVLG00005008345) #17 [REVERSED]
> Marmotini [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Alpin marmot [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM JAK1 (ENSMMMG00000013495) #15 TO CACHD1 (ENSMMMG00000013619) #17
> Marmotini_b [ANCESTRALSPECIES]
>> CHROMOSOME 206
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Squirrel [MODERNSPECIES]
>> CHROMOSOME 292
SYNTENIC BLOCK FROM JAK1 (ENSSTOG00000012422) #15 TO CACHD1 (ENSSTOG00000009821) #17 [REVERSED]
> Arctic ground squirrel [MODERNSPECIES]
>> CHROMOSOME 477
SYNTENIC BLOCK FROM JAK1 (ENSUPAG00010008239) #15 TO CACHD1 (ENSUPAG00010008160) #17 [REVERSED]
> Rodentia_B [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 55
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 746
SYNTENIC BLOCK FROM Jak1 (ENSNGAG00000008128) #15 TO Cachd1 (ENSNGAG00000018544) #17
> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Rat [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM Jak1 (ENSRNOG00000011157) #15 TO Cachd1 (ENSRNOG00000010514) #17 [REVERSED]
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000158648 #16 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158648 #487 AND ENSGT00940000157568 #489
 [REVERSED]
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM Jak1 (MGP_PahariEiJ_G0028540) #15 TO Raver2 (MGP_PahariEiJ_G0028539) #16 [REVERSED]
DISTANT LINK BETWEEN Raver2 (MGP_PahariEiJ_G0028539) #227 AND Cachd1 (MGP_PahariEiJ_G0028537) #229
 [REVERSED]
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000158648 #16
DISTANT LINK BETWEEN ENSGT00940000158648 #754 AND ENSGT00940000157568 #752

> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM Jak1 (MGP_CAROLIEiJ_G0026203) #15 TO Raver2 (MGP_CAROLIEiJ_G0026202) #16 [REVERSED]
DISTANT LINK BETWEEN Raver2 (MGP_CAROLIEiJ_G0026202) #420 AND Cachd1 (MGP_CAROLIEiJ_G0026200) #422
 [REVERSED]
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000158648 #16
DISTANT LINK BETWEEN ENSGT00940000158648 #756 AND ENSGT00940000157568 #754

> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000158648 #16
DISTANT LINK BETWEEN ENSGT00940000158648 #751 AND ENSGT00940000157568 #749

> spretus [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM Jak1 (MGP_SPRETEiJ_G0027172) #15 TO Raver2 (MGP_SPRETEiJ_G0027171) #16 [REVERSED]
DISTANT LINK BETWEEN Raver2 (MGP_SPRETEiJ_G0027171) #437 AND Cachd1 (MGP_SPRETEiJ_G0027169) #439
 [REVERSED]
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 2743
SYNTENIC BLOCK FROM Jak1 (ENSMSIG00000032175) #15 TO Raver2 (ENSMSIG00000032177) #16
DISTANT LINK BETWEEN Raver2 (ENSMSIG00000032177) #3 AND Cachd1 (ENSMSIG00000032180) #1

> Mouse [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM Jak1 (ENSMUSG00000028530) #15 TO Cachd1 (ENSMUSG00000028532) #17 [REVERSED]
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM Jak1 (ENSPEMG00000004628) #15 TO Cachd1 (ENSPEMG00000018442) #17 [REVERSED]
> Prairie vole [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM Jak1 (ENSMOCG00000011865) #15 TO Cachd1 (ENSMOCG00000020004) #17 [REVERSED]
> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Chinese hamster chok1gshd [MODERNSPECIES]
>> CHROMOSOME 111
SYNTENIC BLOCK FROM Jak1 (ENSCGRG00001008727) #15 TO Cachd1 (ENSCGRG00001024125) #17
> Golden Hamster [MODERNSPECIES]
>> CHROMOSOME 849
SYNTENIC BLOCK FROM Jak1 (ENSMAUG00000010024) #15 TO Cachd1 (ENSMAUG00000000758) #17 [REVERSED]
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 98
SYNTENIC BLOCK FROM Jak1 (ENSJJAG00000022247) #15 TO Raver2 (ENSJJAG00000000374) #16
DISTANT LINK BETWEEN Raver2 (ENSJJAG00000000374) #4 AND Cachd1 (ENSJJAG00000007547) #2

> Kangaroo rat [MODERNSPECIES]
>> CHROMOSOME 370
SYNTENIC BLOCK FROM Jak1 (ENSDORG00000013462) #15 TO Cachd1 (ENSDORG00000011104) #17 [REVERSED]
> Primates [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Haplorrhini [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Simiiformes [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Catarrhini [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cercopithecidae [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cercopithecinae [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cercopithecinae_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cercopithecinae_b [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Olive baboon [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSPANG00000001284) #15 TO CACHD1 (ENSPANG00000010808) #17 [REVERSED]
> Cercopithecinae_d [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Drill [MODERNSPECIES]
>> CHROMOSOME 923
SYNTENIC BLOCK FROM JAK1 (ENSMLEG00000038239) #15 TO CACHD1 (ENSMLEG00000041842) #17 [REVERSED]
> Sooty mangabey [MODERNSPECIES]
>> CHROMOSOME 238
SYNTENIC BLOCK FROM JAK1 (ENSCATG00000041174) #15 TO RAVER2 (ENSCATG00000040658) #16
DISTANT LINK BETWEEN RAVER2 (ENSCATG00000040658) #75 AND CACHD1 (ENSCATG00000036728) #73

> Macaca [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Pig-tailed macaque [MODERNSPECIES]
>> CHROMOSOME 266
SYNTENIC BLOCK FROM JAK1 (ENSMNEG00000008188) #15 TO CACHD1 (ENSMNEG00000030755) #17
> Macaca_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Crab-eating macaque [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSMFAG00000003493) #15 TO CACHD1 (ENSMFAG00000037670) #17
> Rhesus [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSMMUG00000018566) #15 TO RAVER2 (ENSMMUG00000018565) #16
DISTANT LINK BETWEEN RAVER2 (ENSMMUG00000018565) #1338 AND CACHD1 (ENSMMUG00000007577) #1336

> Vervet Monkey [MODERNSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM JAK1 (ENSCSAG00000001351) #15 TO CACHD1 (ENSCSAG00000001349) #17
> Rhinopithecus [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Black snub-nosed monkey [MODERNSPECIES]
>> CHROMOSOME 569
SYNTENIC BLOCK FROM JAK1 (ENSRBIG00000010792) #15 TO CACHD1 (ENSRBIG00000044274) #17
> Golden snub-nosed monkey [MODERNSPECIES]
>> CHROMOSOME 1530
SYNTENIC BLOCK FROM JAK1 (ENSRROG00000043516) #15 TO CACHD1 (ENSRROG00000045428) #17 [REVERSED]
> Hominoidea [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Hominidae [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Orangutan [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSPPYG00000001270) #15 TO CACHD1 (ENSPPYG00000001272) #17
> Homo/Pan/Gorilla group [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Gorilla [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSGGOG00000016456) #15 TO CACHD1 (ENSGGOG00000007691) #17 [REVERSED]
> Homo/Pan group [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Pan [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Chimpanzee [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSPTRG00000000825) #15 TO CACHD1 (ENSPTRG00000000823) #17 [REVERSED]
> Bonobo [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSPPAG00000015344) #15 TO CACHD1 (ENSPPAG00000012742) #17 [REVERSED]
> Human [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSG00000162434) #15 TO CACHD1 (ENSG00000158966) #17 [REVERSED]
> Gibbon [MODERNSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM JAK1 (ENSNLEG00000015149) #15 TO CACHD1 (ENSNLEG00000015119) #17 [REVERSED]
> Platyrrhini [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cebidae [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Marmoset [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM JAK1 (ENSCJAG00000016743) #15 TO CACHD1 (ENSCJAG00000016656) #17 [REVERSED]
> Cebidae_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Bolivian squirrel monkey [MODERNSPECIES]
>> CHROMOSOME 45
SYNTENIC BLOCK FROM JAK1 (ENSSBOG00000024631) #15 TO CACHD1 (ENSSBOG00000028299) #17
> Capuchin [MODERNSPECIES]
>> CHROMOSOME 135
SYNTENIC BLOCK FROM JAK1 (ENSCCAG00000021638) #15 TO CACHD1 (ENSCCAG00000023418) #17
> Mas night monkey [MODERNSPECIES]
>> CHROMOSOME 1222
 [REVERSED]
DISTANT LINK BETWEEN JAK1 (ENSANAG00000036647) #71 AND RAVER2 (ENSANAG00000025857) #73
SYNTENIC BLOCK FROM RAVER2 (ENSANAG00000025857) #16 TO CACHD1 (ENSANAG00000033660) #17 [REVERSED]
> Tarsier [MODERNSPECIES]
>> CHROMOSOME 4856
 [REVERSED]
DISTANT LINK BETWEEN JAK1 (ENSTSYG00000006932) #8 AND RAVER2 (ENSTSYG00000006019) #10
SYNTENIC BLOCK FROM RAVER2 (ENSTSYG00000006019) #16 TO CACHD1 (ENSTSYG00000014674) #17 [REVERSED]
> Strepsirrhini [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Bushbaby [MODERNSPECIES]
>> CHROMOSOME 125
SYNTENIC BLOCK FROM JAK1 (ENSOGAG00000011160) #15 TO CACHD1 (ENSOGAG00000011152) #17
> Lemuriformes [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Mouse lemur [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM JAK1 (ENSMICG00000013750) #15 TO CACHD1 (ENSMICG00000013692) #17 [REVERSED]
> Lemuriformes_a [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Coquerels sifaka [MODERNSPECIES]
>> CHROMOSOME 162
SYNTENIC BLOCK FROM JAK1 (ENSPCOG00000018189) #15 TO CACHD1 (ENSPCOG00000018645) #17
> Greater bamboo lemur [MODERNSPECIES]
>> CHROMOSOME 647
SYNTENIC BLOCK FROM JAK1 (ENSPSMG00000006700) #15 TO CACHD1 (ENSPSMG00000006786) #17
> Laurasiatheria [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Eulipotyphla [ANCESTRALSPECIES]
> Common shrew [MODERNSPECIES]
> Hedgehog [MODERNSPECIES]
> Laurasiatheria_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Artiodactyla [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Suina [ANCESTRALSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Pig [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM JAK1 (ENSSSCG00000003809) #15 TO CACHD1 (ENSSSCG00000004829) #17
> Chacoan peccary [MODERNSPECIES]
>> CHROMOSOME 54
SYNTENIC BLOCK FROM JAK1 (ENSCWAG00000010234) #15 TO CACHD1 (ENSCWAG00000010433) #17
> Artiodactyla_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Camelidae [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Arabian camel [MODERNSPECIES]
>> CHROMOSOME 4
 [REVERSED]
DISTANT LINK BETWEEN JAK1 (ENSCDRG00005004601) #704 AND RAVER2 (ENSCDRG00005004547) #706
SYNTENIC BLOCK FROM RAVER2 (ENSCDRG00005004547) #16 TO CACHD1 (ENSCDRG00005004143) #17 [REVERSED]
> Alpaca [MODERNSPECIES]
>> CHROMOSOME 1360
SYNTENIC BLOCK FROM JAK1 (ENSVPAG00000006184) #15 TO CACHD1 (ENSVPAG00000006179) #17 [REVERSED]
> Artiodactyla_b [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cetacea [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Odontoceti [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Odontoceti_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Dolphin [MODERNSPECIES]
>> CHROMOSOME 1293
SYNTENIC BLOCK FROM JAK1 (ENSTTRG00000009715) #15 TO CACHD1 (ENSTTRG00000009607) #17 [REVERSED]
> Odontoceti_b [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Vaquita [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSPSNG00000003215) #15 TO CACHD1 (ENSPSNG00000003080) #17 [REVERSED]
> Monodontidae [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Narwhal [MODERNSPECIES]
>> CHROMOSOME 304
SYNTENIC BLOCK FROM JAK1 (ENSMMNG00015022067) #15 TO CACHD1 (ENSMMNG00015022069) #17
> Beluga whale [MODERNSPECIES]
>> CHROMOSOME 74
SYNTENIC BLOCK FROM JAK1 (ENSDLEG00000021291) #15 TO CACHD1 (ENSDLEG00000021280) #17 [REVERSED]
> Sperm whale [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM JAK1 (ENSPCTG00005022651) #15 TO CACHD1 (ENSPCTG00005022667) #17
> Blue whale [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSBMSG00010002874) #15 TO CACHD1 (ENSBMSG00010002730) #17 [REVERSED]
> Pecora [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Yarkand deer [MODERNSPECIES]
>> CHROMOSOME 12






> Percora_a [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Siberian musk deer [MODERNSPECIES]
>> CHROMOSOME 339
SYNTENIC BLOCK FROM JAK1 (ENSMMSG00000008290) #15 TO CACHD1 (ENSMMSG00000008645) #17
> Bovidae [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Bovinae [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> American bison [MODERNSPECIES]
>> CHROMOSOME 1735
SYNTENIC BLOCK FROM JAK1 (ENSBBBG00000008822) #15 TO CACHD1 (ENSBBBG00000024020) #17
> Bos [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Bos_b [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Hybrid Bos Indicus [MODERNSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM JAK1 (ENSBIXG00005021985) #15 TO RAVER2 (ENSBIXG00005003691) #16
DISTANT LINK BETWEEN RAVER2 (ENSBIXG00005003691) #792 AND CACHD1 (ENSBIXG00005021823) #790

> Cow [MODERNSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM JAK1 (ENSBTAG00000003147) #15 TO CACHD1 (ENSBTAG00000016455) #17
> Bos_a [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Wild yak [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM JAK1 (ENSBMUG00000002390) #15 TO CACHD1 (ENSBMUG00000002292) #17 [REVERSED]
> Domestic yak [MODERNSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM JAK1 (ENSBGRG00000014206) #15 TO CACHD1 (ENSBGRG00000014987) #17
> Caprinae [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Goat [MODERNSPECIES]
>> CHROMOSOME 22
 [REVERSED]
DISTANT LINK BETWEEN JAK1 (ENSCHIG00000012708) #423 AND RAVER2 (ENSCHIG00000005514) #425
SYNTENIC BLOCK FROM RAVER2 (ENSCHIG00000005514) #16 TO CACHD1 (ENSCHIG00000012365) #17 [REVERSED]
> Rambouillet Sheep [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM JAK1 (ENSOARG00020025959) #15 TO CACHD1 (ENSOARG00020025918) #17 [REVERSED]
> Laurasiatheria_b [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Carnivora [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Caniformia [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Caniformia_b [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Mustelinae [ANCESTRALSPECIES]
>> CHROMOSOME 39
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Ferret [MODERNSPECIES]
>> CHROMOSOME 254
SYNTENIC BLOCK FROM JAK1 (ENSMPUG00000000719) #15 TO CACHD1 (ENSMPUG00000000715) #17 [REVERSED]
> American mink [MODERNSPECIES]
>> CHROMOSOME 57
SYNTENIC BLOCK FROM JAK1 (ENSNVIG00000010400) #15 TO CACHD1 (ENSNVIG00000010295) #17 [REVERSED]
> Ursidae [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Giant Panda [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM JAK1 (ENSAMEG00000014980) #15 TO CACHD1 (ENSAMEG00000015187) #17 [REVERSED]
> Ursus [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Polar bear [MODERNSPECIES]
>> CHROMOSOME 170
SYNTENIC BLOCK FROM JAK1 (ENSUMAG00000008476) #15 TO CACHD1 (ENSUMAG00000008533) #17
> American black bear [MODERNSPECIES]
> Canidae [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Red fox [MODERNSPECIES]
>> CHROMOSOME 179
SYNTENIC BLOCK FROM JAK1 (ENSVVUG00000013996) #15 TO CACHD1 (ENSVVUG00000013980) #17 [REVERSED]
> Canis_lupus [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Dog [MODERNSPECIES]
>> CHROMOSOME 33
SYNTENIC BLOCK FROM JAK1 (ENSCAFG00845004547) #15 TO RAVER2 (ENSCAFG00845004615) #16
DISTANT LINK BETWEEN RAVER2 (ENSCAFG00845004615) #577 AND CACHD1 (ENSCAFG00845004709) #575

> Dingo [MODERNSPECIES]
>> CHROMOSOME 373
SYNTENIC BLOCK FROM JAK1 (ENSCAFG00020018270) #15 TO CACHD1 (ENSCAFG00020018033) #17 [REVERSED]
> Felidae [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Panthera [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Tiger [MODERNSPECIES]
>> CHROMOSOME 311
SYNTENIC BLOCK FROM JAK1 (ENSPTIG00000003605) #15 TO CACHD1 (ENSPTIG00000012920) #17
> Panthera_a [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> leopard [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM JAK1 (ENSPPRG00000022662) #15 TO CACHD1 (ENSPPRG00000023686) #17
> lion [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM JAK1 (ENSPLOG00000007282) #15 TO RAVER2 (ENSPLOG00000007347) #16
DISTANT LINK BETWEEN RAVER2 (ENSPLOG00000007347) #1040 AND CACHD1 (ENSPLOG00000007467) #1038

> Cat [MODERNSPECIES]
>> CHROMOSOME 239
SYNTENIC BLOCK FROM JAK1 (ENSFCAG00000001953) #15 TO CACHD1 (ENSFCAG00000010902) #17 [REVERSED]
> Laurasiatheria_c [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Chiroptera [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Microchiroptera [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Microbat [MODERNSPECIES]
>> CHROMOSOME 1000
SYNTENIC BLOCK FROM JAK1 (ENSMLUG00000007723) #15 TO RAVER2 (ENSMLUG00000007699) #16 [REVERSED]
DISTANT LINK BETWEEN RAVER2 (ENSMLUG00000007699) #18 AND CACHD1 (ENSMLUG00000007663) #20
 [REVERSED]
> Greater horseshoe bat [MODERNSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM JAK1 (ENSRFEG00010003864) #15 TO CACHD1 (ENSRFEG00010003774) #17 [REVERSED]
> Megabat [MODERNSPECIES]
>> CHROMOSOME 1632
SYNTENIC BLOCK FROM JAK1 (ENSPVAG00000007173) #15 TO CACHD1 (ENSPVAG00000007170) #17 [REVERSED]
> Equus [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Horse [MODERNSPECIES]
>> CHROMOSOME 26
SYNTENIC BLOCK FROM JAK1 (ENSECAG00000018673) #15 TO CACHD1 (ENSECAG00000022152) #17
> Donkey [MODERNSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM JAK1 (ENSEASG00005008150) #15 TO CACHD1 (ENSEASG00005008161) #17
> Atlantogenata [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Afrotheria [ANCESTRALSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Afrotheria_a [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Elephant [MODERNSPECIES]
>> CHROMOSOME 145
SYNTENIC BLOCK FROM JAK1 (ENSLAFG00000003730) #15 TO CACHD1 (ENSLAFG00000009161) #17
> Hyrax [MODERNSPECIES]
>> CHROMOSOME 4471
SYNTENIC BLOCK FROM JAK1 (ENSPCAG00000000021) #15 TO RAVER2 (ENSPCAG00000000017) #16 [REVERSED]
> Tenrec [MODERNSPECIES]
> Xenarthra [ANCESTRALSPECIES]
>> CHROMOSOME 39
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Armadillo [MODERNSPECIES]
>> CHROMOSOME 4628
SYNTENIC BLOCK FROM JAK1 (ENSDNOG00000012151) #15 TO CACHD1 (ENSDNOG00000012097) #17 [REVERSED]
> Sloth [MODERNSPECIES]
>> CHROMOSOME 4842
SYNTENIC BLOCK FROM JAK1 (ENSCHOG00000007686) #15 TO RAVER2 (ENSCHOG00000007668) #16 [REVERSED]
> Marsupialia [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Marsupialia_b [ANCESTRALSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Diprotodontia [ANCESTRALSPECIES]
>> CHROMOSOME 39
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Wallaby [MODERNSPECIES]
>> CHROMOSOME 6616
SYNTENIC BLOCK FROM JAK1 (ENSMEUG00000012769) #15 TO RAVER2 (ENSMEUG00000012740) #16 [REVERSED]
> Diprotodontia_a [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Common wonbat [MODERNSPECIES]
> koala [MODERNSPECIES]
>> CHROMOSOME 49
SYNTENIC BLOCK FROM JAK1 (ENSPCIG00000020331) #15 TO CACHD1 (ENSPCIG00000020340) #17
> Tasmanian devil [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM JAK1 (ENSSHAG00000014365) #15 TO CACHD1 (ENSSHAG00000015047) #17
> Opossum [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSMODG00000001226 #15 TO CACHD1 (ENSMODG00000001285) #17
> Platypus [MODERNSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM JAK1 (ENSOANG00000042832) #15 TO CACHD1 (ENSOANG00000008330) #17
> Sauria [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Archelosauria [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Cryptodira [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Chinese turtle [MODERNSPECIES]
>> CHROMOSOME 1207
SYNTENIC BLOCK FROM JAK1 (ENSPSIG00000009400) #15 TO CACHD1 (ENSPSIG00000010083) #17
> Testudinoidea [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Emydidae [ANCESTRALSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> painted turtle [MODERNSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM JAK1 (ENSCPBG00000001053) #15 TO CACHD1 (ENSCPBG00000000916) #17 [REVERSED]
> Three-toed box turtle [MODERNSPECIES]
>> CHROMOSOME 97
SYNTENIC BLOCK FROM ENSTMTG00000021386 #15 TO ENSTMTG00000021422 #17
>> CHROMOSOME 98
SYNTENIC BLOCK FROM ENSTMTG00000016096 #15 TO ENSTMTG00000016205 #17
> Testudinidae [ANCESTRALSPECIES]
>> CHROMOSOME 33
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Goode s thornscrub tortoise [MODERNSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM JAK1 (ENSGEVG00005011508) #15 TO CACHD1 (ENSGEVG00005011807) #17
> Abingdon island giant tortoise [MODERNSPECIES]
>> CHROMOSOME 682
SYNTENIC BLOCK FROM JAK1 (ENSCABG00000021120) #15 TO RAVER2 (ENSCABG00000021122) #16
> Archosauria [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Australian saltwater crocodile [MODERNSPECIES]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM JAK1 (ENSCPRG00005011063) #15 TO CACHD1 (ENSCPRG00005011034) #17 [REVERSED]
> Aves [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> African ostrich [MODERNSPECIES]
>> CHROMOSOME 220
SYNTENIC BLOCK FROM JAK1 (ENSSCUG00000004212) #15 TO CACHD1 (ENSSCUG00000004203) #17 [REVERSED]
> Neognathae [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Galloanserae [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Phasianidae [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000157092.e #15 TO ENSGT00940000157568 #17 [REVERSED]
> Phasianidae_b [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000157092.e #15 TO ENSGT00940000157568 #17 [REVERSED]
> Chicken [MODERNSPECIES]
>> CHROMOSOME 37
SYNTENIC BLOCK FROM JAK1 (ENSGALG00010024493) #15 TO CACHD1 (ENSGALG00010024449) #17 [REVERSED]
> Turkey [MODERNSPECIES]
>> CHROMOSOME 1
 [REVERSED]
SYNTENIC BLOCK FROM ENSMGAG00000011807 #15 TO ENSMGAG00000011806 #16 [REVERSED]
 [REVERSED]
> Japanese quail [MODERNSPECIES]
>> CHROMOSOME 26
SYNTENIC BLOCK FROM JAK1 (ENSCJPG00005014496) #15 TO CACHD1 (ENSCJPG00005014494) #17 [REVERSED]
> Anatidae [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Duck [MODERNSPECIES]
>> CHROMOSOME 26
SYNTENIC BLOCK FROM JAK1 (ENSAPLG00000012047) #15 TO CACHD1 (ENSAPLG00000013355) #17 [REVERSED]
> Pink-footed goose [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM JAK1 (ENSABRG00000018398) #15 TO CACHD1 (ENSABRG00000018462) #17
> Neognathae_b [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Neognathae_c [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Golden eagle [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM JAK1 (ENSACCG00020017045) #15 TO CACHD1 (ENSACCG00020017043) #17 [REVERSED]
> Kakapo [MODERNSPECIES]
>> CHROMOSOME 25
SYNTENIC BLOCK FROM JAK1 (ENSSHBG00005012461) #15 TO CACHD1 (ENSSHBG00005012051) #17 [REVERSED]
> Passeriformes [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Great tit [MODERNSPECIES]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM JAK1 (ENSPMJG00000012343) #15 TO CACHD1 (ENSPMJG00000012341) #17 [REVERSED]
> Passeriformes_d [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Flycatcher [MODERNSPECIES]
>> CHROMOSOME 27
 [REVERSED]
DISTANT LINK BETWEEN JAK1 (ENSFALG00000012645) #470 AND ENSFALG00000026307 #472
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSFALG00000024415 #469 AND CACHD1 (ENSFALG00000012622) #471
 [REVERSED]
> Passeriformes_g [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000157092.g #15 TO ENSGT00940000157568 #17
> Medium ground finch [MODERNSPECIES]
>> CHROMOSOME 48
SYNTENIC BLOCK FROM JAK1 (ENSGFOG00000013489) #15 TO CACHD1 (ENSGFOG00000013471) #17 [REVERSED]
> Passeroidea [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000157092.g #15 TO ENSGT00940000157568 #17 [REVERSED]
> Common canary [MODERNSPECIES]
>> CHROMOSOME 9
 [REVERSED]
SYNTENIC BLOCK FROM ENSSCAG00000006966 #15 TO CACHD1 (ENSSCAG00000006858) #17 [REVERSED]
> Zebra finch [MODERNSPECIES]
>> CHROMOSOME 30






> Lepidosauria [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Episquamata [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Toxicofera [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Elapidae [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Indian cobra [MODERNSPECIES]
>> CHROMOSOME 2
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSNNAG00000016668 #830 AND RAVER2 (ENSNNAG00000016550) #832
SYNTENIC BLOCK FROM RAVER2 (ENSNNAG00000016550) #16 TO CACHD1 (ENSNNAG00000016329) #17 [REVERSED]
> Elapidae_a [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Blue-lipped sea krait [MODERNSPECIES]
> Acanthophiinae [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Mainland tiger snake [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM JAK1 (ENSNSUG00000001845) #15 TO CACHD1 (ENSNSUG00000001826) #17 [REVERSED]
> Eastern brown snake [MODERNSPECIES]
>> CHROMOSOME 109
SYNTENIC BLOCK FROM ENSPTXG00000012489 #15 TO ENSPTXG00000012470 #17 [REVERSED]
>> CHROMOSOME 107
SYNTENIC BLOCK FROM ENSPTXG00000018843 #15 TO ENSPTXG00000018838 #17 [REVERSED]
> Lizard [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM JAK1 (ENSACAG00000008478) #15 TO CACHD1 (ENSACAG00000008354) #17
> Laterata [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Common wall lizard [MODERNSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM JAK1 (ENSPMRG00000011088) #15 TO RAVER2 (ENSPMRG00000011111) #16
DISTANT LINK BETWEEN RAVER2 (ENSPMRG00000011111) #424 AND CACHD1 (ENSPMRG00000011156) #422

> Argentine black and white tegu [MODERNSPECIES]
>> CHROMOSOME 31
SYNTENIC BLOCK FROM JAK1 (ENSSMRG00000018281) #15 TO CACHD1 (ENSSMRG00000018279) #17 [REVERSED]
> tuatara [MODERNSPECIES]
>> CHROMOSOME 1725
SYNTENIC BLOCK FROM JAK1 (ENSSPUG00000016469) #15 TO CACHD1 (ENSSPUG00000016415) #17 [REVERSED]
> Anura [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Leishan spiny toad [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM JAK1 (ENSLLEG00000018907) #15 TO RAVER2 (ENSLLEG00000018414) #16 [REVERSED]
DISTANT LINK BETWEEN RAVER2 (ENSLLEG00000018414) #223 AND CACHD1 (ENSLLEG00000017578) #225
 [REVERSED]
> Frog [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM jak1 (ENSXETG00000020396) #15 TO cachd1 (ENSXETG00000020410) #17
> Coelacanth [MODERNSPECIES]
>> CHROMOSOME 2686
SYNTENIC BLOCK FROM JAK1 (ENSLACG00000006843) #15 TO CACHD1 (ENSLACG00000001136) #17 [REVERSED]
> Actinopterygii [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Reedfish [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM jak1 (ENSECRG00000009148) #15 TO CACHD1 (ENSECRG00000009038) #17 [REVERSED]
> Neopterygii [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Spotted gar [MODERNSPECIES]
>> CHROMOSOME 648
SYNTENIC BLOCK FROM jak1 (ENSLOCG00000006806) #15 TO CACHD1 (ENSLOCG00000006750) #17 [REVERSED]
> Osteoglossocephalai [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Clupeocephala [ANCESTRALSPECIES]
>> CHROMOSOME 108
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Otomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 281
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Clupeiformes [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Atlantic herring [MODERNSPECIES]
>> CHROMOSOME 1
 [REVERSED]
DISTANT LINK BETWEEN jak1 (ENSCHAG00000001469) #73 AND CACHD1 (ENSCHAG00000025608) #75
 [REVERSED]
> Denticle herring [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM jak1 (ENSDCDG00000033348) #15 TO CACHD1 (ENSDCDG00000033270) #17 [REVERSED]
> Otophysi [ANCESTRALSPECIES]
>> CHROMOSOME 32
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Characiphysae [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Characiphysae_b [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Electric eel [MODERNSPECIES]
>> CHROMOSOME 994
SYNTENIC BLOCK FROM jak1 (ENSEEEG00000006170) #15 TO CACHD1 (ENSEEEG00000006142) #17 [REVERSED]
> Characoidei [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Mexicana tetra [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM jak1 (ENSAMXG00000010587) #15 TO CACHD1 (ENSAMXG00000010564) #17 [REVERSED]
> Red-bellied piranha [MODERNSPECIES]
>> CHROMOSOME 957
SYNTENIC BLOCK FROM jak1 (ENSPNAG00000008445) #15 TO RAVER2 (ENSPNAG00000000962) #16
> Channel catfish [MODERNSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM jak1 (ENSIPUG00000007138) #15 TO CACHD1 (ENSIPUG00000006905) #17 [REVERSED]
> Cyprinoidei [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Cyprininae [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00940000157092.y.a #15 TO ENSGT00940000157568.f #17
>> CHROMOSOME 41
SYNTENIC BLOCK FROM ENSGT00940000157092.y.b #15 TO ENSGT00940000157568.e #17 [REVERSED]
> Cyprininae_a [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000157092.y.b #15 TO ENSGT00940000157568.e #17 [REVERSED]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM ENSGT00940000157092.y.a #15 TO ENSGT00940000157568.f #17 [REVERSED]
> Golden-line barbel [MODERNSPECIES]
>> CHROMOSOME 137
SYNTENIC BLOCK FROM jak1 (ENSSGRG00000018024) #15 TO CACHD1 (ENSSGRG00000022754) #17
>> CHROMOSOME 571
SYNTENIC BLOCK FROM jak1 (ENSSGRG00000010133) #15 TO CACHD1 (ENSSGRG00000013937) #17
> Common carp reference [MODERNSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM jak1 (ENSCCRG00000021967) #15 TO CACHD1 (ENSCCRG00000060884) #17 [REVERSED]
>> CHROMOSOME 16

DISTANT LINK BETWEEN jak1 (ENSCCRG00000033813) #476 AND RAVER2 (ENSCCRG00000045941) #474
SYNTENIC BLOCK FROM RAVER2 (ENSCCRG00000045941) #16 TO CACHD1 (ENSCCRG00000017861) #17
> Goldfish [MODERNSPECIES]
>> CHROMOSOME 46
SYNTENIC BLOCK FROM jak1 (ENSCARG00000003433) #15 TO CACHD1 (ENSCARG00000003587) #17
>> CHROMOSOME 24
SYNTENIC BLOCK FROM jak1 (ENSCARG00000051008) #15 TO CACHD1 (ENSCARG00000050340) #17 [REVERSED]
> Zebrafish [MODERNSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM jak1 (ENSDARG00000020625) #15 TO CACHD1 (ENSDARG00000061590) #17
> Euteleosteomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 70
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Acanthomorphata [ANCESTRALSPECIES]
>> CHROMOSOME 164
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Cod [MODERNSPECIES]
>> CHROMOSOME 3

DISTANT LINK BETWEEN jak1 (ENSGMOG00000003132) #72 AND RAVER2 (ENSGMOG00000013535) #70

DISTANT LINK BETWEEN RAVER2 (ENSGMOG00000013535) #75 AND CACHD1 (ENSGMOG00000013506) #72

> Euacanthomorphacea [ANCESTRALSPECIES]
>> CHROMOSOME 31
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Pinecone sodierfish [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM jak1 (ENSMMDG00005017951) #15 TO CACHD1 (ENSMMDG00005021338) #17
> Percomorphaceae [ANCESTRALSPECIES]
>> CHROMOSOME 32
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Tiger tail seahorse [MODERNSPECIES]
>> CHROMOSOME 242
SYNTENIC BLOCK FROM jak1 (ENSHCOG00000005975) #15 TO CACHD1 (ENSHCOG00000005915) #17
> Percomorphaceae_B [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Ovalentaria [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Atherinomorphae [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Cyprinodontiformes [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Cyprinodontoidei [ANCESTRALSPECIES]
>> CHROMOSOME 29
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> NAME_4 [ANCESTRALSPECIES]
>> CHROMOSOME 62
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Mummichog [MODERNSPECIES]
>> CHROMOSOME 2395
SYNTENIC BLOCK FROM jak1 (ENSFHEG00000001301) #15 TO CACHD1 (ENSFHEG00000001343) #17 [REVERSED]
> Sheepshead minnow [MODERNSPECIES]
>> CHROMOSOME 288
SYNTENIC BLOCK FROM jak1 (ENSCVAG00000002739) #15 TO CACHD1 (ENSCVAG00000002667) #17
> Poeciliinae [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Platyfish [MODERNSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM jak1 (ENSXMAG00000002212) #15 TO CACHD1 (ENSXMAG00000002196) #17 [REVERSED]
> Poecilia [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> NAME_6 [ANCESTRALSPECIES]
>> CHROMOSOME 59
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Sailfin molly [MODERNSPECIES]
>> CHROMOSOME 437
SYNTENIC BLOCK FROM jak1 (ENSPLAG00000000109) #15 TO CACHD1 (ENSPLAG00000005755) #17 [REVERSED]
> Amazon molly [MODERNSPECIES]
>> CHROMOSOME 290
SYNTENIC BLOCK FROM jak1 (ENSPFOG00000009493) #15 TO CACHD1 (ENSPFOG00000008959) #17 [REVERSED]
> Guppy [MODERNSPECIES]
>> CHROMOSOME 456
SYNTENIC BLOCK FROM jak1 (ENSPREG00000020413) #15 TO CACHD1 (ENSPREG00000020549) #17
> Aplocheiloidei [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Turquoise killifish [MODERNSPECIES]
>> CHROMOSOME 1626
SYNTENIC BLOCK FROM JAK1 (ENSNFUG00015025398) #15 TO RAVER2 (ENSNFUG00015025397) #16 [REVERSED]
DISTANT LINK BETWEEN RAVER2 (ENSNFUG00015025397) #166 AND CACHD1 (ENSNFUG00015025394) #169
 [REVERSED]
> Mangrove rivulus [MODERNSPECIES]
>> CHROMOSOME 53
SYNTENIC BLOCK FROM jak1 (ENSKMAG00000011718) #15 TO CACHD1 (ENSKMAG00000011523) #17 [REVERSED]
> Oryzias [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Oryzias_a [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Chinese medaka [MODERNSPECIES]
>> CHROMOSOME 41
SYNTENIC BLOCK FROM jak1 (ENSOSIG00000019729) #15 TO ENSOSIG00000021595 #16
SYNTENIC BLOCK FROM ENSOSIG00000021599 #16 TO CACHD1 (ENSOSIG00000021622) #17
> Japanese Medaka HdrR [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM jak1 (ENSORLG00000010063) #15 TO CACHD1 (ENSORLG00000010145) #17
> Oryzias_b [ANCESTRALSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Javanese ricefish [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM jak1 (ENSOJAG00000003942) #15 TO CACHD1 (ENSOJAG00000004436) #17
> Indian medaka [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM jak1 (ENSOMEG00000007715) #15 TO CACHD1 (ENSOMEG00000007958) #17 [REVERSED]
> Ovalentaria_B [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Cichlidae [ANCESTRALSPECIES]
>> CHROMOSOME 43
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Pseudocrenilabrinae [ANCESTRALSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Pseudocrenilabrinae_A [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Haplochromini [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Haplochromini_A [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Haplochromini_B [ANCESTRALSPECIES]
>> CHROMOSOME 32
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Zebra mbuna [MODERNSPECIES]
>> CHROMOSOME 1099
SYNTENIC BLOCK FROM jak1 (ENSMZEG00005014405) #15 TO CACHD1 (ENSMZEG00005014345) #17 [REVERSED]
> Eastern happy [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM jak1 (ENSACLG00000001880) #15 TO CACHD1 (ENSACLG00000001723) #17 [REVERSED]
> P. nyererei [MODERNSPECIES]
>> CHROMOSOME 425
 [REVERSED]
DISTANT LINK BETWEEN jak1 (ENSPNYG00000013970) #1 AND ENSPNYG00000013943 #3
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSPNYG00000013951 #0 AND CACHD1 (ENSPNYG00000013908) #2
 [REVERSED]
> Burton s mouthbrooder [MODERNSPECIES]
>> CHROMOSOME 709
SYNTENIC BLOCK FROM jak1 (ENSHBUG00000023087) #15 TO CACHD1 (ENSHBUG00000022964) #17
> Lyretail cichlid [MODERNSPECIES]
>> CHROMOSOME 504
 [REVERSED]
DISTANT LINK BETWEEN jak1 (ENSNBRG00000014392) #3 AND ENSNBRG00000014345 #5
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSNBRG00000014366 #2 AND CACHD1 (ENSNBRG00000014295) #4
 [REVERSED]
> Nile tilapia [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM jak1 (ENSONIG00000008800) #15 TO RAVER2 (ENSONIG00000008808) #16 [REVERSED]
DISTANT LINK BETWEEN RAVER2 (ENSONIG00000008808) #835 AND CACHD1 (ENSONIG00000008810) #837
 [REVERSED]
> Midas cichlid [MODERNSPECIES]
>> CHROMOSOME 314
 [REVERSED]
DISTANT LINK BETWEEN jak1 (ENSACIG00000012257) #42 AND ENSACIG00000012229 #44
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSACIG00000012240 #41 AND CACHD1 (ENSACIG00000012163) #43
 [REVERSED]
> Pomacentridae [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Pomacentridae_A [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Amphiprion [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Orange clownfish [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM jak1 (ENSAPEG00000010718) #15 TO ENSAPEG00000010823 #16
SYNTENIC BLOCK FROM ENSAPEG00000010843 #16 TO CACHD1 (ENSAPEG00000010866) #17
> Clown anemonefish [MODERNSPECIES]
>> CHROMOSOME 2180
 [REVERSED]
SYNTENIC BLOCK FROM ENSAOCG00000010129 #16 TO CACHD1 (ENSAOCG00000010108) #17 [REVERSED]
> Spiny chromis [MODERNSPECIES]
>> CHROMOSOME 585
SYNTENIC BLOCK FROM jak1 (ENSAPOG00000002744) #15 TO CACHD1 (ENSAPOG00000002859) #17 [REVERSED]
> Bicolor damselfish [MODERNSPECIES]
>> CHROMOSOME 688
SYNTENIC BLOCK FROM RAVER2 (ENSSPAG00000004134) #16 TO CACHD1 (ENSSPAG00000004014) #17
> Percomorphaceae_C [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Percomorphaceae_D [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Carangaria [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Pleuronectoidei [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Tongue sole [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM jak1 (ENSCSEG00000017797) #15 TO CACHD1 (ENSCSEG00000017866) #17
> Turbot [MODERNSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM jak1 (ENSSMAG00000020659) #15 TO CACHD1 (ENSSMAG00000020646) #17 [REVERSED]
> Carangaria_A [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Barramundi perch [MODERNSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM jak1 (ENSLCAG00010009784) #15 TO CACHD1 (ENSLCAG00010010274) #17
> Seriola [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Greater amberjack [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM jak1 (ENSSDUG00000013009) #15 TO CACHD1 (ENSSDUG00000013103) #17
> Yellowtail amberjack [MODERNSPECIES]
>> CHROMOSOME 3236
SYNTENIC BLOCK FROM jak1 (ENSSLDG00000002783) #15 TO CACHD1 (ENSSLDG00000002572) #17 [REVERSED]
> Anabantaria [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Zig-zag eel [MODERNSPECIES]
>> CHROMOSOME 18
 [REVERSED]
DISTANT LINK BETWEEN jak1 (ENSMAMG00000009020) #207 AND ENSMAMG00000026466 #210
 [REVERSED]
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSMAMG00000027617 #206 AND CACHD1 (ENSMAMG00000009078) #209
 [REVERSED]
> Anabantoidei [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Climbing perch [MODERNSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM jak1 (ENSATEG00000019610) #15 TO CACHD1 (ENSATEG00000019771) #17
> Siamese fighting fish [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM jak1 (ENSBSLG00000019279) #15 TO CACHD1 (ENSBSLG00000018891) #17 [REVERSED]
> Eupercaria [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Tetraodontidae [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Tetraodon [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM jak1 (ENSTNIG00000018107) #15 TO RAVER2 (ENSTNIG00000018106) #16
> Fugu [MODERNSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM jak1 (ENSTRUG00000018544) #15 TO CACHD1 (ENSTRUG00000018536) #17
> Eupecaria_A [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Ballan wrasse [MODERNSPECIES]
>> CHROMOSOME 596
SYNTENIC BLOCK FROM ENSLBEG00000003778 #16 TO CACHD1 (ENSLBEG00000003838) #17 [REVERSED]
> Eupecaria_B [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Eupecaria_C [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Eupercaria_incertae_sedis [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> European seabass [MODERNSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM jak1 (ENSDLAG00005025117) #15 TO CACHD1 (ENSDLAG00005025014) #17 [REVERSED]
> Large yellow croaker [MODERNSPECIES]
>> CHROMOSOME 489
SYNTENIC BLOCK FROM jak1 (ENSLCRG00005005113) #15 TO CACHD1 (ENSLCRG00005005618) #17
> Gilthead seabream [MODERNSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM jak1 (ENSSAUG00010010552) #15 TO CACHD1 (ENSSAUG00010013527) #17
> Perciformes [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Cottioidei [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17
> Lumpfish [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM jak1 (ENSCLMG00005015131) #15 TO CACHD1 (ENSCLMG00005014999) #17 [REVERSED]
> Stickleback [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM jak1 (ENSGACG00000007145) #15 TO CACHD1 (ENSGACG00000007086) #17 [REVERSED]
> Perciformes_a [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Pike perch [MODERNSPECIES]
>> CHROMOSOME 61
SYNTENIC BLOCK FROM jak1 (ENSSLUG00000013395) #15 TO ENSSLUG00000018425 #16
SYNTENIC BLOCK FROM ENSSLUG00000018432 #16 TO CACHD1 (ENSSLUG00000018445) #17
> Channel bull blenny [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM jak1 (ENSCGOG00000021992) #15 TO CACHD1 (ENSCGOG00000021855) #17 [REVERSED]
> Protacanthopterygii [ANCESTRALSPECIES]
>> CHROMOSOME 30
SYNTENIC BLOCK FROM ENSGT00940000157092 #15 TO ENSGT00940000157568 #17 [REVERSED]
> Salmoninae [ANCESTRALSPECIES]
>> CHROMOSOME 104
SYNTENIC BLOCK FROM ENSGT00940000157092.v.a.a #15 TO ENSGT00940000157568.g.b #17
>> CHROMOSOME 36
SYNTENIC BLOCK FROM ENSGT00940000158648.h #16 TO ENSGT00940000157568.g.a #17
> Salmoninae_a [ANCESTRALSPECIES]
>> CHROMOSOME 103
SYNTENIC BLOCK FROM ENSGT00940000157092.v.a.a #15 TO ENSGT00940000157568.g.b #17
>> CHROMOSOME 46
SYNTENIC BLOCK FROM ENSGT00940000157092.v.a.b #15 TO ENSGT00940000157568.g.a #17 [REVERSED]
> Oncorhynchus [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092.v.a.a #15 TO ENSGT00940000158648.g #16 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158648.g #119 AND ENSGT00940000157568.g.b #121
 [REVERSED]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000157092.v.a.b #15 TO ENSGT00940000157568.g.a #17 [REVERSED]
> Rainbow trout [MODERNSPECIES]
>> CHROMOSOME 26

DISTANT LINK BETWEEN jak1 (ENSOMYG00000008777) #1903 AND RAVER2 (ENSOMYG00000009510) #1901

DISTANT LINK BETWEEN RAVER2 (ENSOMYG00000009510) #1905 AND CACHD1 (ENSOMYG00000009801) #1903

>> CHROMOSOME 22
SYNTENIC BLOCK FROM jak1 (ENSOMYG00000000773) #15 TO RAVER2 (ENSOMYG00000053323) #16
DISTANT LINK BETWEEN RAVER2 (ENSOMYG00000053323) #758 AND CACHD1 (ENSOMYG00000000850) #756

> Oncorhynchus_a [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00940000157092.v.a.b.a #15 TO ENSGT00940000157568.g.a #17 [REVERSED]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00940000157092.v.a.a #15 TO ENSGT00940000158648.g #16 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000158648.g #117 AND ENSGT00940000157568.g.b #119
 [REVERSED]
> Chinook salmon [MODERNSPECIES]
>> CHROMOSOME 29
SYNTENIC BLOCK FROM ENSOTSG00005021437 #16 TO CACHD1 (ENSOTSG00005021441) #17 [REVERSED]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM jak1 (ENSOTSG00005008868) #15 TO RAVER2 (ENSOTSG00005011249) #16
> Coho salmon [MODERNSPECIES]
>> CHROMOSOME 4




>> CHROMOSOME 1

DISTANT LINK BETWEEN jak1 (ENSOKIG00005030483) #709 AND RAVER2 (ENSOKIG00005001907) #707

DISTANT LINK BETWEEN RAVER2 (ENSOKIG00005001907) #711 AND CACHD1 (ENSOKIG00005002042) #709

> Salmo [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00940000157092.v.a.b #15 TO ENSGT00940000157568.g.a #17
>> CHROMOSOME 64
SYNTENIC BLOCK FROM ENSGT00940000157092.v.a.a #15 TO ENSGT00940000157568.g.b #17
> River trout [MODERNSPECIES]
>> CHROMOSOME 33
SYNTENIC BLOCK FROM jak1 (ENSSTUG00000014197) #15 TO CACHD1 (ENSSTUG00000014041) #17 [REVERSED]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM jak1 (ENSSTUG00000040336) #15 TO CACHD1 (ENSSTUG00000040572) #17
> Atlantic salmon [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM jak1 (ENSSSAG00000038503) #15 TO RAVER2 (ENSSSAG00000103493) #16
DISTANT LINK BETWEEN RAVER2 (ENSSSAG00000103493) #754 AND cachd1 (ENSSSAG00000040599) #752

>> CHROMOSOME 15
SYNTENIC BLOCK FROM jak1 (ENSSSAG00000081097) #15 TO CACHD1 (ENSSSAG00000081067) #17 [REVERSED]
> Huchen [MODERNSPECIES]
>> CHROMOSOME 2713
SYNTENIC BLOCK FROM ENSHHUG00000047929 #16 TO ENSHHUG00000047930 #17 [REVERSED]
>> CHROMOSOME 1060
SYNTENIC BLOCK FROM jak1 (ENSHHUG00000050871) #15 TO CACHD1 (ENSHHUG00000050936) #17
> Northern pike [MODERNSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM jak1 (ENSELUG00000022457) #15 TO CACHD1 (ENSELUG00000022312) #17
> Osteoglossiformes [ANCESTRALSPECIES]
>> CHROMOSOME 51
SYNTENIC BLOCK FROM ENSGT00940000157092.r #15 TO ENSGT00940000157568.d #17
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00940000157092.q #15 TO ENSGT00940000157568.c #17
> Asian bonytongue [MODERNSPECIES]
>> CHROMOSOME 24
SYNTENIC BLOCK FROM jak1 (ENSSFOG00015001377) #15 TO CACHD1 (ENSSFOG00015001180) #17 [REVERSED]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM jak1 (ENSSFOG00015012910) #15 TO CACHD1 (ENSSFOG00015013065) #17 [REVERSED]
> P. kingsleyae [MODERNSPECIES]
>> CHROMOSOME 81
SYNTENIC BLOCK FROM jak1 (ENSPKIG00000019281) #15 TO CACHD1 (ENSPKIG00000019410) #17
>> CHROMOSOME 5
SYNTENIC BLOCK FROM jak1 (ENSPKIG00000013954) #15 TO RAVER2 (ENSPKIG00000013925) #16 [REVERSED]
DISTANT LINK BETWEEN RAVER2 (ENSPKIG00000013925) #144 AND CACHD1 (ENSPKIG00000013830) #146
 [REVERSED]
> Elephant shark [MODERNSPECIES]
>> CHROMOSOME 1768
 [REVERSED]
DISTANT LINK BETWEEN jak1 (ENSCMIG00000015076) #0 AND ENSCMIG00000015017 #3
 [REVERSED]
 [REVERSED]
> Cyclostomata [ANCESTRALSPECIES]
> Lamprey [MODERNSPECIES]
> Hagfish [MODERNSPECIES]
> Ciona [ANCESTRALSPECIES]
> Ciona intestinalis [MODERNSPECIES]
> Ciona savignyi [MODERNSPECIES]
> Ecdysozoa [ANCESTRALSPECIES]
> Caenorhabditis elegans [MODERNSPECIES]
> Fruitfly [MODERNSPECIES]