> Glires [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3
DISTANT LINK BETWEEN ENSGT00530000064199 #331 AND ENSGT00940000160319 #329
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155041 #24
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30
> Rodentia [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
DISTANT LINK BETWEEN ENSGT00530000064199 #293 AND ENSGT00940000160319 #295
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> Rodentia_B [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155041 #24
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155041 #24
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30
> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> Golden Hamster [REFERENCESPECIES]
>> CHROMOSOME 640
SYNTENIC BLOCK FROM Orc2 (ENSMAUG00000019370) #0 TO Ctla4 (ENSMAUG00000017208) #30 [REVERSED]
> Chinese hamster chok1gshd [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM Orc2 (ENSCGRG00001016911) #0 TO Cflar (ENSCGRG00001016122) #3
ADJACENCY BETWEEN Cflar (ENSCGRG00001016122) #3 AND Casp8 (ENSCGRG00001020998) #6
SYNTENIC BLOCK FROM Casp8 (ENSCGRG00001020998) #6 TO Trak2 (ENSCGRG00001017078) #8
DISTANT LINK BETWEEN Trak2 (ENSCGRG00001017078) #1381 AND ENSCGRG00001018260 #1379
SYNTENIC BLOCK FROM ENSCGRG00001018260 #10 TO Nop58 (ENSCGRG00001017869) #18
DISTANT LINK BETWEEN Nop58 (ENSCGRG00001017869) #1391 AND Bmpr2 (ENSCGRG00001020694) #1389
SYNTENIC BLOCK FROM Bmpr2 (ENSCGRG00001020694) #19 TO Nbeal1 (ENSCGRG00001018313) #24
SYNTENIC BLOCK FROM Nbeal1 (ENSCGRG00001018313) #25 TO Ctla4 (ENSCGRG00001017244) #30
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155041 #24
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM Orc2 (ENSPEMG00000010035) #0 TO Ndufb3 (ENSPEMG00000018280) #2 [REVERSED]
DISTANT LINK BETWEEN Ndufb3 (ENSPEMG00000018280) #368 AND Cflar (ENSPEMG00000022446) #370
 [REVERSED]
ADJACENCY BETWEEN Cflar (ENSPEMG00000022446) #3 AND Casp8 (ENSPEMG00000021544) #6
SYNTENIC BLOCK FROM Casp8 (ENSPEMG00000021544) #6 TO Fam117b (ENSPEMG00000011700) #20 [REVERSED]
DISTANT LINK BETWEEN Fam117b (ENSPEMG00000011700) #351 AND Ica1l (ENSPEMG00000021278) #353
SYNTENIC BLOCK FROM Ica1l (ENSPEMG00000021278) #21 TO Carf (ENSPEMG00000020983) #23 [REVERSED]
DISTANT LINK BETWEEN Carf (ENSPEMG00000020983) #347 AND Nbeal1 (ENSPEMG00000029402) #349
 [REVERSED]
SYNTENIC BLOCK FROM Nbeal1 (ENSPEMG00000029402) #25 TO Ctla4 (ENSPEMG00000020722) #30 [REVERSED]
> Prairie vole [MODERNSPECIES]
>> CHROMOSOME 354


ADJACENCY BETWEEN Nbeal1 (ENSMOCG00000015319) #25 AND Abi2 (ENSMOCG00000013762) #27
SYNTENIC BLOCK FROM Abi2 (ENSMOCG00000013762) #27 TO Ctla4 (ENSMOCG00000018484) #30
>> CHROMOSOME 91
SYNTENIC BLOCK FROM Orc2 (ENSMOCG00000016158) #0 TO Hycc2 (ENSMOCG00000012367) #1 [REVERSED]
ADJACENCY BETWEEN Hycc2 (ENSMOCG00000012367) #1 AND ENSMOCG00000019249 #3
 [REVERSED]
ADJACENCY BETWEEN ENSMOCG00000019249 #3 AND Casp8 (ENSMOCG00000001017) #6
SYNTENIC BLOCK FROM Casp8 (ENSMOCG00000001017) #6 TO Gm973 (ENSMOCG00000001667) #16 [REVERSED]
DISTANT LINK BETWEEN Gm973 (ENSMOCG00000001667) #5 AND Nop58 (ENSMOCG00000007756) #7
SYNTENIC BLOCK FROM Nop58 (ENSMOCG00000007756) #18 TO Carf (ENSMOCG00000002732) #23 [REVERSED]
> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> Rat [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM Orc2 (ENSRNOG00000012558) #0 TO Cflar (ENSRNOG00000012473) #3
ADJACENCY BETWEEN Cflar (ENSRNOG00000012473) #3 AND Casp8 (ENSRNOG00000012331) #6
SYNTENIC BLOCK FROM Casp8 (ENSRNOG00000012331) #6 TO Mpp4 (ENSRNOG00000010486) #12
DISTANT LINK BETWEEN Mpp4 (ENSRNOG00000010486) #471 AND Als2 (ENSRNOG00000023280) #469

DISTANT LINK BETWEEN Als2 (ENSRNOG00000023280) #473 AND Cdk15 (ENSRNOG00000022899) #471
SYNTENIC BLOCK FROM Cdk15 (ENSRNOG00000022899) #14 TO Bmpr2 (ENSRNOG00000022196) #19
DISTANT LINK BETWEEN Bmpr2 (ENSRNOG00000022196) #481 AND Fam117b (ENSRNOG00000022066) #478
SYNTENIC BLOCK FROM Fam117b (ENSRNOG00000022066) #20 TO Ica1l (ENSRNOG00000017258) #21

SYNTENIC BLOCK FROM Wdr12 (ENSRNOG00000017340) #22 TO Nbeal1 (ENSRNOG00000021525) #24
SYNTENIC BLOCK FROM Nbeal1 (ENSRNOG00000021525) #25 TO Ctla4 (ENSRNOG00000054129) #30
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6

ADJACENCY BETWEEN ENSGT00940000160319 #6 AND ENSGT00940000158202 #8
SYNTENIC BLOCK FROM ENSGT00940000158202 #8 TO ENSGT00940000155041 #24
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM Orc2 (MGP_PahariEiJ_G0027404) #0 TO Cflar (MGP_PahariEiJ_G0027407) #3
ADJACENCY BETWEEN Cflar (MGP_PahariEiJ_G0027407) #3 AND Casp8 (MGP_PahariEiJ_G0027408) #6

ADJACENCY BETWEEN Casp8 (MGP_PahariEiJ_G0027408) #6 AND Trak2 (MGP_PahariEiJ_G0027409) #8
SYNTENIC BLOCK FROM Trak2 (MGP_PahariEiJ_G0027409) #8 TO MGP_PahariEiJ_G0027425 #24
SYNTENIC BLOCK FROM MGP_PahariEiJ_G0027425 #25 TO Ctla4 (MGP_PahariEiJ_G0027430) #30
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6

ADJACENCY BETWEEN ENSGT00940000160319 #6 AND ENSGT00940000158202 #8
SYNTENIC BLOCK FROM ENSGT00940000158202 #8 TO ENSGT00940000155041 #24
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30
> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM Orc2 (MGP_CAROLIEiJ_G0014166) #0 TO Cflar (MGP_CAROLIEiJ_G0014169) #3
ADJACENCY BETWEEN Cflar (MGP_CAROLIEiJ_G0014169) #3 AND Casp8 (MGP_CAROLIEiJ_G0014170) #6

ADJACENCY BETWEEN Casp8 (MGP_CAROLIEiJ_G0014170) #6 AND Trak2 (MGP_CAROLIEiJ_G0014171) #8
SYNTENIC BLOCK FROM Trak2 (MGP_CAROLIEiJ_G0014171) #8 TO MGP_CAROLIEiJ_G0014184 #21
DISTANT LINK BETWEEN MGP_CAROLIEiJ_G0014184 #265 AND Carf (MGP_CAROLIEiJ_G0014186) #263
SYNTENIC BLOCK FROM Carf (MGP_CAROLIEiJ_G0014186) #23 TO Nbeal1 (MGP_CAROLIEiJ_G0014187) #24
SYNTENIC BLOCK FROM Nbeal1 (MGP_CAROLIEiJ_G0014187) #25 TO Ctla4 (MGP_CAROLIEiJ_G0014192) #30
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6

ADJACENCY BETWEEN ENSGT00940000160319 #6 AND ENSGT00940000158202 #8
SYNTENIC BLOCK FROM ENSGT00940000158202 #8 TO ENSGT00940000155041 #24
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30
> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6
 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000160319 #6 AND ENSGT00940000158202 #8
SYNTENIC BLOCK FROM ENSGT00940000158202 #8 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> spretus [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM Orc2 (MGP_SPRETEiJ_G0014972) #0 TO Cflar (MGP_SPRETEiJ_G0014975) #3
ADJACENCY BETWEEN Cflar (MGP_SPRETEiJ_G0014975) #3 AND Casp8 (MGP_SPRETEiJ_G0014976) #6

ADJACENCY BETWEEN Casp8 (MGP_SPRETEiJ_G0014976) #6 AND Trak2 (MGP_SPRETEiJ_G0014978) #8
SYNTENIC BLOCK FROM Trak2 (MGP_SPRETEiJ_G0014978) #8 TO Bmpr2 (MGP_SPRETEiJ_G0014989) #19
DISTANT LINK BETWEEN Bmpr2 (MGP_SPRETEiJ_G0014989) #259 AND Ica1l (MGP_SPRETEiJ_G0014991) #257
SYNTENIC BLOCK FROM Ica1l (MGP_SPRETEiJ_G0014991) #21 TO Nbeal1 (MGP_SPRETEiJ_G0014994) #24
SYNTENIC BLOCK FROM Nbeal1 (MGP_SPRETEiJ_G0014994) #25 TO Ctla4 (MGP_SPRETEiJ_G0014999) #30
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 180

DISTANT LINK BETWEEN Cflar (ENSMSIG00000020491) #0 AND Casp8 (ENSMSIG00000020468) #2

>> CHROMOSOME 44
SYNTENIC BLOCK FROM Trak2 (ENSMSIG00000008206) #8 TO Carf (ENSMSIG00000010210) #23
DISTANT LINK BETWEEN Carf (ENSMSIG00000010210) #17 AND Nbeal1 (ENSMSIG00000010304) #15

SYNTENIC BLOCK FROM Nbeal1 (ENSMSIG00000010304) #25 TO Cd28 (ENSMSIG00000011356) #29
DISTANT LINK BETWEEN Cd28 (ENSMSIG00000011356) #23 AND Ctla4 (ENSMSIG00000011388) #21

>> CHROMOSOME 51
SYNTENIC BLOCK FROM Orc2 (ENSMSIG00000023700) #0 TO ENSMSIG00000023789 #2 [REVERSED]
> Mouse [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM Orc2 (ENSMUSG00000026037) #0 TO Ndufb3 (ENSMUSG00000026032) #2
DISTANT LINK BETWEEN Ndufb3 (ENSMUSG00000026032) #254 AND Cflar (ENSMUSG00000026031) #252

ADJACENCY BETWEEN Cflar (ENSMUSG00000026031) #3 AND Casp8 (ENSMUSG00000026029) #6


DISTANT LINK BETWEEN Flacc1 (ENSMUSG00000047528) #256 AND Trak2 (ENSMUSG00000026028) #253
SYNTENIC BLOCK FROM Trak2 (ENSMUSG00000026028) #8 TO Nbeal1 (ENSMUSG00000073664) #24
SYNTENIC BLOCK FROM Nbeal1 (ENSMUSG00000073664) #25 TO Ctla4 (ENSMUSG00000026011) #30
> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 1322
 [REVERSED]
SYNTENIC BLOCK FROM Nbeal1 (ENSNGAG00000020072) #25 TO Ctla4 (ENSNGAG00000019017) #30 [REVERSED]
>> CHROMOSOME 921
SYNTENIC BLOCK FROM Cdk15 (ENSNGAG00000014306) #14 TO Fzd7 (ENSNGAG00000012206) #15
DISTANT LINK BETWEEN Fzd7 (ENSNGAG00000012206) #3 AND Gm973 (ENSNGAG00000000576) #1
SYNTENIC BLOCK FROM Gm973 (ENSNGAG00000000576) #16 TO Carf (ENSNGAG00000022294) #23
>> CHROMOSOME 1045
SYNTENIC BLOCK FROM Hycc2 (ENSNGAG00000016307) #1 TO Cflar (ENSNGAG00000010943) #3
ADJACENCY BETWEEN Cflar (ENSNGAG00000010943) #3 AND Flacc1 (ENSNGAG00000000655) #7
SYNTENIC BLOCK FROM Flacc1 (ENSNGAG00000000655) #7 TO Stradb (ENSNGAG00000016359) #9
>> CHROMOSOME 362
 [REVERSED]
ADJACENCY BETWEEN Tmem237 (ENSNGAG00000012637) #11 AND Als2 (ENSNGAG00000014693) #13
 [REVERSED]
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 52
 [REVERSED]
DISTANT LINK BETWEEN Orc2 (ENSJJAG00000011615) #74 AND Hycc2 (ENSJJAG00000022468) #76
 [REVERSED]
ADJACENCY BETWEEN Hycc2 (ENSJJAG00000022468) #1 AND Cflar (ENSJJAG00000024196) #3
 [REVERSED]
ADJACENCY BETWEEN Cflar (ENSJJAG00000024196) #3 AND Casp8 (ENSJJAG00000014714) #6
SYNTENIC BLOCK FROM Casp8 (ENSJJAG00000014714) #6 TO Stradb (ENSJJAG00000021748) #9 [REVERSED]
ADJACENCY BETWEEN Stradb (ENSJJAG00000021748) #9 AND Tmem237 (ENSJJAG00000021833) #11
SYNTENIC BLOCK FROM Tmem237 (ENSJJAG00000021833) #11 TO Nbeal1 (ENSJJAG00000023210) #24 [REVERSED]
SYNTENIC BLOCK FROM Nbeal1 (ENSJJAG00000023210) #25 TO Ctla4 (ENSJJAG00000013112) #30 [REVERSED]
> Kangaroo rat [MODERNSPECIES]
>> CHROMOSOME 320
SYNTENIC BLOCK FROM Orc2 (ENSDORG00000007391) #0 TO Hycc2 (ENSDORG00000029531) #1
DISTANT LINK BETWEEN Hycc2 (ENSDORG00000029531) #151 AND Trak2 (ENSDORG00000001835) #148
SYNTENIC BLOCK FROM Trak2 (ENSDORG00000001835) #8 TO Stradb (ENSDORG00000001838) #9
ADJACENCY BETWEEN Stradb (ENSDORG00000001838) #9 AND Tmem237 (ENSDORG00000001840) #11
SYNTENIC BLOCK FROM Tmem237 (ENSDORG00000001840) #11 TO Fzd7 (ENSDORG00000014396) #15
DISTANT LINK BETWEEN Fzd7 (ENSDORG00000014396) #159 AND Bmpr2 (ENSDORG00000009209) #157
SYNTENIC BLOCK FROM Bmpr2 (ENSDORG00000009209) #19 TO Nbeal1 (ENSDORG00000015714) #24
SYNTENIC BLOCK FROM Nbeal1 (ENSDORG00000015714) #25 TO Cyp20a1 (ENSDORG00000015715) #26
DISTANT LINK BETWEEN Cyp20a1 (ENSDORG00000015715) #167 AND Abi2 (ENSDORG00000028252) #165
SYNTENIC BLOCK FROM Abi2 (ENSDORG00000028252) #27 TO Ctla4 (ENSDORG00000008556) #30
> Rodentia_A [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
DISTANT LINK BETWEEN ENSGT00530000064199 #291 AND ENSGT00940000160319 #293
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> Hystricomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
DISTANT LINK BETWEEN ENSGT00530000064199 #311 AND ENSGT00940000160319 #309
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155390 #9 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000155390 #9 AND ENSGT00390000005159 #11
SYNTENIC BLOCK FROM ENSGT00390000005159 #11 TO ENSGT00940000155861.C #13 [REVERSED]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM ENSGT00940000159606 #14 TO ENSGT00940000155041 #24
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30
> Hystricomorpha_a [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
DISTANT LINK BETWEEN ENSGT00530000064199 #304 AND ENSGT00940000160319 #302
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155390 #9 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000155390 #9 AND ENSGT00390000005159 #11
SYNTENIC BLOCK FROM ENSGT00390000005159 #11 TO ENSGT00940000155861.C #13 [REVERSED]
>> CHROMOSOME 67
SYNTENIC BLOCK FROM ENSGT00940000159606 #14 TO ENSGT00940000156449 #19 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000156449 #19 AND ENSGT00390000005530.a.a #21
SYNTENIC BLOCK FROM ENSGT00390000005530.a.a #21 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> Guinea pig [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM CDK15 (ENSCPOG00000003272) #14 TO FZD7 (ENSCPOG00000003276) #15
ADJACENCY BETWEEN FZD7 (ENSCPOG00000003276) #15 AND SUMO1 (ENSCPOG00000039864) #17
SYNTENIC BLOCK FROM SUMO1 (ENSCPOG00000039864) #17 TO BMPR2 (ENSCPOG00000009586) #19
ADJACENCY BETWEEN BMPR2 (ENSCPOG00000009586) #19 AND ICA1L (ENSCPOG00000009349) #21
SYNTENIC BLOCK FROM ICA1L (ENSCPOG00000009349) #21 TO NBEAL1 (ENSCPOG00000008009) #24
SYNTENIC BLOCK FROM NBEAL1 (ENSCPOG00000008009) #25 TO CTLA4 (ENSCPOG00000019534) #30
>> CHROMOSOME 104
SYNTENIC BLOCK FROM ORC2 (ENSCPOG00000004552) #0 TO CFLAR (ENSCPOG00000000098) #3
DISTANT LINK BETWEEN CFLAR (ENSCPOG00000000098) #6 AND CASP8 (ENSCPOG00000009618) #8
SYNTENIC BLOCK FROM CASP8 (ENSCPOG00000009618) #6 TO STRADB (ENSCPOG00000013028) #9
ADJACENCY BETWEEN STRADB (ENSCPOG00000013028) #9 AND TMEM237 (ENSCPOG00000040314) #11
SYNTENIC BLOCK FROM TMEM237 (ENSCPOG00000040314) #11 TO ALS2 (ENSCPOG00000014263) #13
> Hystricomorpha_b [ANCESTRALSPECIES]
>> CHROMOSOME 24
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
ADJACENCY BETWEEN ENSGT00530000064199 #3 AND ENSGT00940000160319 #6
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155390 #9 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000155390 #9 AND ENSGT00390000005159 #11
SYNTENIC BLOCK FROM ENSGT00390000005159 #11 TO ENSGT00940000155861.C #13 [REVERSED]
>> CHROMOSOME 52
SYNTENIC BLOCK FROM ENSGT00940000159606 #14 TO ENSGT00940000156449 #19 [REVERSED]
ADJACENCY BETWEEN ENSGT00940000156449 #19 AND ENSGT00390000005530.a.a #21
SYNTENIC BLOCK FROM ENSGT00390000005530.a.a #21 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> Degu [MODERNSPECIES]
>> CHROMOSOME 66

DISTANT LINK BETWEEN ORC2 (ENSODEG00000008853) #11 AND HYCC2 (ENSODEG00000008316) #13
SYNTENIC BLOCK FROM HYCC2 (ENSODEG00000008316) #1 TO CFLAR (ENSODEG00000009559) #3
ADJACENCY BETWEEN CFLAR (ENSODEG00000009559) #3 AND CASP8 (ENSODEG00000009065) #6

ADJACENCY BETWEEN CASP8 (ENSODEG00000009065) #6 AND TRAK2 (ENSODEG00000007402) #8
SYNTENIC BLOCK FROM TRAK2 (ENSODEG00000007402) #8 TO STRADB (ENSODEG00000010540) #9
ADJACENCY BETWEEN STRADB (ENSODEG00000010540) #9 AND TMEM237 (ENSODEG00000009685) #11
SYNTENIC BLOCK FROM TMEM237 (ENSODEG00000009685) #11 TO ALS2 (ENSODEG00000007275) #13
>> CHROMOSOME 57
SYNTENIC BLOCK FROM CDK15 (ENSODEG00000009574) #14 TO FZD7 (ENSODEG00000010108) #15 [REVERSED]
ADJACENCY BETWEEN FZD7 (ENSODEG00000010108) #15 AND ENSODEG00000012987 #17
SYNTENIC BLOCK FROM ENSODEG00000012987 #17 TO BMPR2 (ENSODEG00000011132) #19 [REVERSED]
DISTANT LINK BETWEEN BMPR2 (ENSODEG00000011132) #73 AND FAM117B (ENSODEG00000010132) #75
 [REVERSED]
DISTANT LINK BETWEEN FAM117B (ENSODEG00000010132) #71 AND ENSODEG00000010403 #73
 [REVERSED]
DISTANT LINK BETWEEN ENSODEG00000010403 #68 AND WDR12 (ENSODEG00000011602) #71
SYNTENIC BLOCK FROM WDR12 (ENSODEG00000011602) #22 TO NBEAL1 (ENSODEG00000010440) #24 [REVERSED]
SYNTENIC BLOCK FROM NBEAL1 (ENSODEG00000010440) #25 TO CYP20A1 (ENSODEG00000010253) #26 [REVERSED]
DISTANT LINK BETWEEN CYP20A1 (ENSODEG00000010253) #63 AND ABI2 (ENSODEG00000009457) #65
SYNTENIC BLOCK FROM ABI2 (ENSODEG00000009457) #27 TO ENSODEG00000013477 #28 [REVERSED]
ADJACENCY BETWEEN ENSODEG00000013477 #28 AND CTLA4 (ENSODEG00000009327) #30
 [REVERSED]
> Long-tailed chinchilla [MODERNSPECIES]
>> CHROMOSOME 164
SYNTENIC BLOCK FROM CDK15 (ENSCLAG00000003400) #14 TO BMPR2 (ENSCLAG00000006272) #19 [REVERSED]
ADJACENCY BETWEEN BMPR2 (ENSCLAG00000006272) #19 AND ICA1L (ENSCLAG00000005015) #21
SYNTENIC BLOCK FROM ICA1L (ENSCLAG00000005015) #21 TO CARF (ENSCLAG00000007915) #23 [REVERSED]
DISTANT LINK BETWEEN CARF (ENSCLAG00000007915) #52 AND NBEAL1 (ENSCLAG00000005102) #55
 [REVERSED]
SYNTENIC BLOCK FROM NBEAL1 (ENSCLAG00000005102) #25 TO CYP20A1 (ENSCLAG00000004163) #26 [REVERSED]
DISTANT LINK BETWEEN CYP20A1 (ENSCLAG00000004163) #48 AND ABI2 (ENSCLAG00000004021) #51
SYNTENIC BLOCK FROM ABI2 (ENSCLAG00000004021) #27 TO CTLA4 (ENSCLAG00000004042) #30 [REVERSED]
>> CHROMOSOME 110
SYNTENIC BLOCK FROM ORC2 (ENSCLAG00000013209) #0 TO CFLAR (ENSCLAG00000013322) #3
ADJACENCY BETWEEN CFLAR (ENSCLAG00000013322) #3 AND CASP8 (ENSCLAG00000012773) #6
SYNTENIC BLOCK FROM CASP8 (ENSCLAG00000012773) #6 TO STRADB (ENSCLAG00000012985) #9
ADJACENCY BETWEEN STRADB (ENSCLAG00000012985) #9 AND TMEM237 (ENSCLAG00000011765) #11
SYNTENIC BLOCK FROM TMEM237 (ENSCLAG00000011765) #11 TO ALS2 (ENSCLAG00000012306) #13
> Naked mole-rat female [MODERNSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSHGLG00000009970 #14 TO ENSHGLG00000011278 #18 [REVERSED]
DISTANT LINK BETWEEN ENSHGLG00000011278 #44 AND BMPR2 (ENSHGLG00000004325) #47
SYNTENIC BLOCK FROM BMPR2 (ENSHGLG00000004325) #19 TO FAM117B (ENSHGLG00000010337) #20 [REVERSED]
DISTANT LINK BETWEEN FAM117B (ENSHGLG00000010337) #40 AND ICA1L (ENSHGLG00000007772) #43
SYNTENIC BLOCK FROM ICA1L (ENSHGLG00000007772) #21 TO WDR12 (ENSHGLG00000004891) #22 [REVERSED]
DISTANT LINK BETWEEN WDR12 (ENSHGLG00000004891) #36 AND CARF (ENSHGLG00000007326) #39
 [REVERSED]
DISTANT LINK BETWEEN CARF (ENSHGLG00000007326) #34 AND NBEAL1 (ENSHGLG00000004471) #36
 [REVERSED]
SYNTENIC BLOCK FROM NBEAL1 (ENSHGLG00000004471) #25 TO CTLA4 (ENSHGLG00000009115) #30 [REVERSED]
>> CHROMOSOME 14


>> CHROMOSOME 22

DISTANT LINK BETWEEN ENSHGLG00000010323 #87 AND ENSHGLG00000000458 #231
 [REVERSED]
SYNTENIC BLOCK FROM ENSHGLG00000009432 #1 TO CFLAR (ENSHGLG00000042118) #3
SYNTENIC BLOCK FROM ENSHGLG00000040561 #6 TO FLACC1 (ENSHGLG00000007412) #7
DISTANT LINK BETWEEN FLACC1 (ENSHGLG00000007412) #269 AND ENSHGLG00000004915 #271
SYNTENIC BLOCK FROM ENSHGLG00000004915 #8 TO ENSHGLG00000004703 #9
DISTANT LINK BETWEEN ENSHGLG00000004703 #266 AND ENSHGLG00000003940 #268

ADJACENCY BETWEEN ENSHGLG00000003940 #11 AND ENSHGLG00000002790 #13

>> CHROMOSOME 6
 [REVERSED]
DISTANT LINK BETWEEN ENSHGLG00000044690 #547 AND ENSHGLG00000015648 #93

> Sciuridae [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
DISTANT LINK BETWEEN ENSGT00530000064199 #284 AND ENSGT00940000160319 #286
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> Eurasian red squirrel [MODERNSPECIES]
>> CHROMOSOME 12

DISTANT LINK BETWEEN ORC2 (ENSSVLG00005004127) #1568 AND HYCC2 (ENSSVLG00005004160) #1566
SYNTENIC BLOCK FROM HYCC2 (ENSSVLG00005004160) #1 TO CFLAR (ENSSVLG00005004210) #3
DISTANT LINK BETWEEN CFLAR (ENSSVLG00005004210) #1575 AND CASP8 (ENSSVLG00005004545) #1570

DISTANT LINK BETWEEN CASP8 (ENSSVLG00005004545) #1577 AND FLACC1 (ENSSVLG00005004644) #1575
SYNTENIC BLOCK FROM FLACC1 (ENSSVLG00005004644) #7 TO ENSSVLG00005000534 #20
DISTANT LINK BETWEEN ENSSVLG00005000534 #1592 AND ENSSVLG00005000579 #1590
SYNTENIC BLOCK FROM ENSSVLG00005000579 #21 TO ENSSVLG00005000686 #23
DISTANT LINK BETWEEN ENSSVLG00005000686 #1596 AND NBEAL1 (ENSSVLG00005000853) #1594

SYNTENIC BLOCK FROM NBEAL1 (ENSSVLG00005000853) #25 TO ABI2 (ENSSVLG00005001071) #27
ADJACENCY BETWEEN ABI2 (ENSSVLG00005001071) #27 AND CD28 (ENSSVLG00005001473) #29
SYNTENIC BLOCK FROM CD28 (ENSSVLG00005001473) #29 TO CTLA4 (ENSSVLG00005001529) #30
>> CHROMOSOME 13

DISTANT LINK BETWEEN ENSSVLG00005001160 #669 AND ENSSVLG00005003026 #895

>> CHROMOSOME 11

DISTANT LINK BETWEEN ENSSVLG00005000860 #499 AND ENSSVLG00005010384 #1284
 [REVERSED]
> Marmotini [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
DISTANT LINK BETWEEN ENSGT00530000064199 #283 AND ENSGT00940000160319 #285
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000156444 #12 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000156444 #275 AND ENSGT00940000155861.C #277
SYNTENIC BLOCK FROM ENSGT00940000155861.C #13 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> Alpin marmot [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ORC2 (ENSMMMG00000012136) #0 TO CFLAR (ENSMMMG00000012269) #3 [REVERSED]
DISTANT LINK BETWEEN CFLAR (ENSMMMG00000012269) #112 AND CASP8 (ENSMMMG00000012315) #110
SYNTENIC BLOCK FROM CASP8 (ENSMMMG00000012315) #6 TO MPP4 (ENSMMMG00000012482) #12 [REVERSED]
DISTANT LINK BETWEEN MPP4 (ENSMMMG00000012482) #120 AND ALS2 (ENSMMMG00000012683) #118
SYNTENIC BLOCK FROM ALS2 (ENSMMMG00000012683) #13 TO CDK15 (ENSMMMG00000012752) #14 [REVERSED]
ADJACENCY BETWEEN CDK15 (ENSMMMG00000012752) #14 AND KIAA2012 (ENSMMMG00000012837) #16
SYNTENIC BLOCK FROM KIAA2012 (ENSMMMG00000012837) #16 TO NOP58 (ENSMMMG00000012922) #18 [REVERSED]
DISTANT LINK BETWEEN NOP58 (ENSMMMG00000012922) #127 AND BMPR2 (ENSMMMG00000012999) #124
 [REVERSED]
DISTANT LINK BETWEEN BMPR2 (ENSMMMG00000012999) #129 AND ENSMMMG00000013051 #127
 [REVERSED]
SYNTENIC BLOCK FROM ENSMMMG00000013060 #20 TO NBEAL1 (ENSMMMG00000013229) #24 [REVERSED]
SYNTENIC BLOCK FROM NBEAL1 (ENSMMMG00000013229) #25 TO CTLA4 (ENSMMMG00000013609) #30 [REVERSED]
> Marmotini_b [ANCESTRALSPECIES]
>> CHROMOSOME 103
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
DISTANT LINK BETWEEN ENSGT00530000064199 #45 AND ENSGT00940000160319 #47
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00940000156444 #12 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000156444 #37 AND ENSGT00940000155861.C #39
SYNTENIC BLOCK FROM ENSGT00940000155861.C #13 TO ENSGT00940000155041 #24 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041 #25 TO ENSGT00530000063873.B #30 [REVERSED]
> Squirrel [MODERNSPECIES]
>> CHROMOSOME 326
SYNTENIC BLOCK FROM ORC2 (ENSSTOG00000019442) #0 TO CFLAR (ENSSTOG00000009642) #3
DISTANT LINK BETWEEN CFLAR (ENSSTOG00000009642) #11 AND CASP8 (ENSSTOG00000011342) #8
SYNTENIC BLOCK FROM CASP8 (ENSSTOG00000011342) #6 TO STRADB (ENSSTOG00000021132) #9
ADJACENCY BETWEEN STRADB (ENSSTOG00000021132) #9 AND TMEM237 (ENSSTOG00000025175) #11
SYNTENIC BLOCK FROM TMEM237 (ENSSTOG00000025175) #11 TO MPP4 (ENSSTOG00000025322) #12
DISTANT LINK BETWEEN MPP4 (ENSSTOG00000025322) #18 AND ALS2 (ENSSTOG00000016119) #16
SYNTENIC BLOCK FROM ALS2 (ENSSTOG00000016119) #13 TO FZD7 (ENSSTOG00000020705) #15
ADJACENCY BETWEEN FZD7 (ENSSTOG00000020705) #15 AND Sumo1 (ENSSTOG00000025405) #17
SYNTENIC BLOCK FROM Sumo1 (ENSSTOG00000025405) #17 TO ICA1L (ENSSTOG00000009931) #21
DISTANT LINK BETWEEN ICA1L (ENSSTOG00000009931) #27 AND WDR12 (ENSSTOG00000001578) #25


DISTANT LINK BETWEEN CARF (ENSSTOG00000001585) #28 AND NBEAL1 (ENSSTOG00000021783) #26

SYNTENIC BLOCK FROM NBEAL1 (ENSSTOG00000021783) #25 TO CYP20A1 (ENSSTOG00000013781) #26
>> CHROMOSOME 231
SYNTENIC BLOCK FROM ABI2 (ENSSTOG00000015888) #27 TO CTLA4 (ENSSTOG00000020540) #30 [REVERSED]
> Arctic ground squirrel [MODERNSPECIES]
>> CHROMOSOME 317
SYNTENIC BLOCK FROM ORC2 (ENSUPAG00010015014) #0 TO CFLAR (ENSUPAG00010014940) #3 [REVERSED]
DISTANT LINK BETWEEN CFLAR (ENSUPAG00010014940) #20 AND CASP8 (ENSUPAG00010014705) #22
SYNTENIC BLOCK FROM CASP8 (ENSUPAG00010014705) #6 TO NOP58 (ENSUPAG00010014015) #18 [REVERSED]
DISTANT LINK BETWEEN NOP58 (ENSUPAG00010014015) #5 AND BMPR2 (ENSUPAG00010013984) #8
SYNTENIC BLOCK FROM BMPR2 (ENSUPAG00010013984) #19 TO NBEAL1 (ENSUPAG00010013702) #24 [REVERSED]
 [REVERSED]
>> CHROMOSOME 141
SYNTENIC BLOCK FROM CYP20A1 (ENSUPAG00010007092) #26 TO RAPH1 (ENSUPAG00010007232) #28 [REVERSED]
DISTANT LINK BETWEEN RAPH1 (ENSUPAG00010007232) #4 AND CD28 (ENSUPAG00010007360) #2
SYNTENIC BLOCK FROM CD28 (ENSUPAG00010007360) #29 TO CTLA4 (ENSUPAG00010007371) #30 [REVERSED]
> Lagomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00390000015228 #0 TO ENSGT00530000064199 #3 [REVERSED]
DISTANT LINK BETWEEN ENSGT00530000064199 #183 AND ENSGT00940000160319 #185
SYNTENIC BLOCK FROM ENSGT00940000160319 #6 TO ENSGT00390000013916 #23 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000013916 #164 AND ENSGT00940000155041.nb #166
 [REVERSED]
SYNTENIC BLOCK FROM ENSGT00940000155041.ob #24 TO ENSGT00940000155041.nb #25 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000155041.ob #163 AND ENSGT00500000044939 #165
SYNTENIC BLOCK FROM ENSGT00500000044939 #26 TO ENSGT00530000063873.B #30 [REVERSED]
> Pika [MODERNSPECIES]
>> CHROMOSOME 572
SYNTENIC BLOCK FROM ENSOPRG00000005643 #27 TO ENSOPRG00000005675 #28 [REVERSED]
>> CHROMOSOME 1573
SYNTENIC BLOCK FROM FAM117B (ENSOPRG00000008352) #20 TO ENSOPRG00000008432 #24 [REVERSED]
 [REVERSED]
>> CHROMOSOME 4633
SYNTENIC BLOCK FROM ORC2 (ENSOPRG00000005718) #0 TO HYCC2 (ENSOPRG00000005742) #1 [REVERSED]
DISTANT LINK BETWEEN HYCC2 (ENSOPRG00000005742) #7 AND CFLAR (ENSOPRG00000005780) #5
 [REVERSED]
>> CHROMOSOME 1886
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 1890
SYNTENIC BLOCK FROM CASP8 (ENSOPRG00000015347) #6 TO CDK15 (ENSOPRG00000015579) #14 [REVERSED]
> Rabbit [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ORC2 (ENSOCUG00000010675) #0 TO HYCC2 (ENSOCUG00000010690) #1
DISTANT LINK BETWEEN HYCC2 (ENSOCUG00000010690) #666 AND NDUFB3 (ENSOCUG00000011069) #664
SYNTENIC BLOCK FROM NDUFB3 (ENSOCUG00000011069) #2 TO CFLAR (ENSOCUG00000011072) #3
DISTANT LINK BETWEEN CFLAR (ENSOCUG00000011072) #671 AND ENSOCUG00000036865 #667

SYNTENIC BLOCK FROM ENSOCUG00000007128 #6 TO ENSOCUG00000027085 #10
SYNTENIC BLOCK FROM ENSOCUG00000035542 #10 TO FZD7 (ENSOCUG00000011457) #15
DISTANT LINK BETWEEN FZD7 (ENSOCUG00000011457) #684 AND KIAA2012 (ENSOCUG00000003626) #682
SYNTENIC BLOCK FROM KIAA2012 (ENSOCUG00000003626) #16 TO ENSOCUG00000006347 #20
SYNTENIC BLOCK FROM ENSOCUG00000030693 #20 TO CARF (ENSOCUG00000005335) #23
DISTANT LINK BETWEEN CARF (ENSOCUG00000005335) #694 AND NBEAL1 (ENSOCUG00000008716) #692

SYNTENIC BLOCK FROM NBEAL1 (ENSOCUG00000008716) #25 TO CD28 (ENSOCUG00000016134) #29
DISTANT LINK BETWEEN CD28 (ENSOCUG00000016134) #700 AND CTLA4 (ENSOCUG00000017274) #698