> Euarchontoglires [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Euarchontoglires_A [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Glires [ANCESTRALSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Lagomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Pika [REFERENCESPECIES]
>> CHROMOSOME 971
SYNTENIC BLOCK FROM PRTG (ENSOPRG00000014340) #15 TO PYGO1 (ENSOPRG00000014331) #16 [REVERSED]
> Rabbit [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSOCUG00000027152 #15 TO PYGO1 (ENSOCUG00000011752) #16
> Rodentia [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Rodentia_A [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Hystricomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Hystricomorpha_a [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Guinea pig [MODERNSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM PRTG (ENSCPOG00000001715) #15 TO PYGO1 (ENSCPOG00000031441) #16 [REVERSED]
> Hystricomorpha_b [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Degu [MODERNSPECIES]
>> CHROMOSOME 146

DISTANT LINK BETWEEN PRTG (ENSODEG00000006148) #6 AND PYGO1 (ENSODEG00000005615) #4

> Long-tailed chinchilla [MODERNSPECIES]
>> CHROMOSOME 116
SYNTENIC BLOCK FROM PRTG (ENSCLAG00000009566) #15 TO PYGO1 (ENSCLAG00000010540) #16
> Naked mole-rat female [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM PRTG (ENSHGLG00000009677) #15 TO PYGO1 (ENSHGLG00000034526) #16 [REVERSED]
> Sciuridae [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Eurasian red squirrel [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM PRTG (ENSSVLG00005009076) #15 TO PYGO1 (ENSSVLG00005009006) #16 [REVERSED]
> Marmotini [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Alpin marmot [MODERNSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM PRTG (ENSMMMG00000015217) #15 TO PYGO1 (ENSMMMG00000015245) #16
> Marmotini_b [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Squirrel [MODERNSPECIES]
>> CHROMOSOME 71
SYNTENIC BLOCK FROM PRTG (ENSSTOG00000009243) #15 TO PYGO1 (ENSSTOG00000009236) #16 [REVERSED]
> Arctic ground squirrel [MODERNSPECIES]
>> CHROMOSOME 578
SYNTENIC BLOCK FROM PRTG (ENSUPAG00010003066) #15 TO PYGO1 (ENSUPAG00010003094) #16
> Rodentia_B [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 25
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 479
SYNTENIC BLOCK FROM Prtg (ENSNGAG00000016273) #15 TO Pygo1 (ENSNGAG00000013925) #16
> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Rat [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM Prtg (ENSRNOG00000055251) #15 TO Pygo1 (ENSRNOG00000066086) #16
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM Prtg (MGP_PahariEiJ_G0015285) #15 TO Pygo1 (MGP_PahariEiJ_G0015286) #16
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM Prtg (MGP_CAROLIEiJ_G0032421) #15 TO Pygo1 (MGP_CAROLIEiJ_G0032422) #16
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> spretus [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM Prtg (MGP_SPRETEiJ_G0033559) #15 TO Pygo1 (MGP_SPRETEiJ_G0033560) #16
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 3354
SYNTENIC BLOCK FROM Prtg (ENSMSIG00000030011) #15 TO Pygo1 (ENSMSIG00000030007) #16 [REVERSED]
> Mouse [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM Prtg (ENSMUSG00000036030) #15 TO Pygo1 (ENSMUSG00000034910) #16
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 24
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM Prtg (ENSPEMG00000021228) #15 TO Pygo1 (ENSPEMG00000005028) #16
> Prairie vole [MODERNSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM Prtg (ENSMOCG00000021980) #15 TO Pygo1 (ENSMOCG00000012375) #16 [REVERSED]
> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Chinese hamster chok1gshd [MODERNSPECIES]
>> CHROMOSOME 284
SYNTENIC BLOCK FROM Prtg (ENSCGRG00001019030) #15 TO Pygo1 (ENSCGRG00001005599) #16 [REVERSED]
> Golden Hamster [MODERNSPECIES]
>> CHROMOSOME 658
SYNTENIC BLOCK FROM Prtg (ENSMAUG00000021146) #15 TO Pygo1 (ENSMAUG00000007751) #16 [REVERSED]
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 92
SYNTENIC BLOCK FROM Prtg (ENSJJAG00000011718) #15 TO Pygo1 (ENSJJAG00000012455) #16 [REVERSED]
> Kangaroo rat [MODERNSPECIES]
>> CHROMOSOME 330
SYNTENIC BLOCK FROM Prtg (ENSDORG00000012398) #15 TO Pygo1 (ENSDORG00000028210) #16
> Tree shrew [MODERNSPECIES]
>> CHROMOSOME 3768
SYNTENIC BLOCK FROM PRTG (ENSTBEG00000010820) #15 TO PYGO1 (ENSTBEG00000010814) #16 [REVERSED]
> Primates [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Haplorrhini [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Simiiformes [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Catarrhini [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Cercopithecidae [ANCESTRALSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Cercopithecinae [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Cercopithecinae_a [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Cercopithecinae_b [ANCESTRALSPECIES]
>> CHROMOSOME 31
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Olive baboon [MODERNSPECIES]
> Cercopithecinae_d [ANCESTRALSPECIES]
>> CHROMOSOME 37
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Drill [MODERNSPECIES]
>> CHROMOSOME 142
SYNTENIC BLOCK FROM PRTG (ENSMLEG00000039567) #15 TO PYGO1 (ENSMLEG00000031763) #16 [REVERSED]
> Sooty mangabey [MODERNSPECIES]
>> CHROMOSOME 336
SYNTENIC BLOCK FROM PRTG (ENSCATG00000035941) #15 TO PYGO1 (ENSCATG00000044728) #16
> Macaca [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Pig-tailed macaque [MODERNSPECIES]
>> CHROMOSOME 77
SYNTENIC BLOCK FROM PRTG (ENSMNEG00000043514) #15 TO PYGO1 (ENSMNEG00000021769) #16
> Macaca_a [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Crab-eating macaque [MODERNSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM PRTG (ENSMFAG00000038722) #15 TO PYGO1 (ENSMFAG00000033302) #16 [REVERSED]
> Rhesus [MODERNSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM PRTG (ENSMMUG00000003653) #15 TO PYGO1 (ENSMMUG00000052322) #16 [REVERSED]
> Vervet Monkey [MODERNSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM PRTG (ENSCSAG00000011752) #15 TO PYGO1 (ENSCSAG00000011684) #16
> Rhinopithecus [ANCESTRALSPECIES]
>> CHROMOSOME 491
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Black snub-nosed monkey [MODERNSPECIES]
>> CHROMOSOME 80
SYNTENIC BLOCK FROM PRTG (ENSRBIG00000016104) #15 TO PYGO1 (ENSRBIG00000033116) #16
> Golden snub-nosed monkey [MODERNSPECIES]
>> CHROMOSOME 1685
SYNTENIC BLOCK FROM PRTG (ENSRROG00000027887) #15 TO PYGO1 (ENSRROG00000043649) #16
> Hominoidea [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Hominidae [ANCESTRALSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Orangutan [MODERNSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM PRTG (ENSPPYG00000006500) #15 TO PYGO1 (ENSPPYG00000006499) #16 [REVERSED]
> Homo/Pan/Gorilla group [ANCESTRALSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Gorilla [MODERNSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM PRTG (ENSGGOG00000026231) #15 TO PYGO1 (ENSGGOG00000043463) #16 [REVERSED]
> Homo/Pan group [ANCESTRALSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Pan [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Chimpanzee [MODERNSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM PRTG (ENSPTRG00000007101) #15 TO PYGO1 (ENSPTRG00000042720) #16 [REVERSED]
> Bonobo [MODERNSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM PRTG (ENSPPAG00000034279) #15 TO PYGO1 (ENSPPAG00000031145) #16 [REVERSED]
> Human [MODERNSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM PRTG (ENSG00000166450) #15 TO PYGO1 (ENSG00000171016) #16 [REVERSED]
> Gibbon [MODERNSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM PRTG (ENSNLEG00000006624) #15 TO PYGO1 (ENSNLEG00000006621) #16
> Platyrrhini [ANCESTRALSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Cebidae [ANCESTRALSPECIES]
>> CHROMOSOME 29
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Marmoset [MODERNSPECIES]
>> CHROMOSOME 1
 [REVERSED]
DISTANT LINK BETWEEN PRTG (ENSCJAG00000002222) #351 AND PYGO1 (ENSCJAG00000002242) #353
 [REVERSED]
> Cebidae_a [ANCESTRALSPECIES]
>> CHROMOSOME 39
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16 [REVERSED]
> Bolivian squirrel monkey [MODERNSPECIES]
>> CHROMOSOME 117
SYNTENIC BLOCK FROM PRTG (ENSSBOG00000023518) #15 TO PYGO1 (ENSSBOG00000019371) #16 [REVERSED]
> Capuchin [MODERNSPECIES]
>> CHROMOSOME 154
SYNTENIC BLOCK FROM PRTG (ENSCCAG00000023400) #15 TO PYGO1 (ENSCCAG00000022604) #16 [REVERSED]
> Mas night monkey [MODERNSPECIES]
>> CHROMOSOME 749
SYNTENIC BLOCK FROM PRTG (ENSANAG00000026849) #15 TO PYGO1 (ENSANAG00000037462) #16
> Tarsier [MODERNSPECIES]
> Strepsirrhini [ANCESTRALSPECIES]
>> CHROMOSOME 2
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Bushbaby [MODERNSPECIES]
>> CHROMOSOME 126
SYNTENIC BLOCK FROM PRTG (ENSOGAG00000005449) #15 TO PYGO1 (ENSOGAG00000002974) #16 [REVERSED]
> Lemuriformes [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Mouse lemur [MODERNSPECIES]
>> CHROMOSOME 22



> Lemuriformes_a [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00940000155943.a #15 TO ENSGT00530000063948.b #16
> Coquerels sifaka [MODERNSPECIES]
>> CHROMOSOME 729
SYNTENIC BLOCK FROM PRTG (ENSPCOG00000019280) #15 TO PYGO1 (ENSPCOG00000008297) #16 [REVERSED]
> Greater bamboo lemur [MODERNSPECIES]
>> CHROMOSOME 1024
SYNTENIC BLOCK FROM PRTG (ENSPSMG00000014622) #15 TO PYGO1 (ENSPSMG00000014598) #16 [REVERSED]