> Euarchontoglires_A [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00940000154761 #2 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000154761 #186 AND ENSGT00940000163007 #188
SYNTENIC BLOCK FROM ENSGT00940000163007 #3 TO ENSGT00390000017613 #7 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00950000182995.e.a.a.a #181 AND ENSGT00390000009488 #586
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30 [REVERSED]
> Glires [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00940000154761 #2
DISTANT LINK BETWEEN ENSGT00940000154761 #435 AND ENSGT00940000163007 #433
SYNTENIC BLOCK FROM ENSGT00940000163007 #3 TO ENSGT00390000017613 #7

DISTANT LINK BETWEEN ENSGT00950000182995.e.a.a.a #440 AND ENSGT00390000009488 #35
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Rodentia [ANCESTRALSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7

DISTANT LINK BETWEEN ENSGT00950000182995.e.a.a.a #438 AND ENSGT00390000009488 #35
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Rodentia_B [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7

DISTANT LINK BETWEEN ENSGT00950000182995.e.a.a.a #423 AND ENSGT00390000009488 #35
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 37
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 38
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 3
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7 [REVERSED]
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30 [REVERSED]
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7 [REVERSED]
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30 [REVERSED]
> Prairie vole [REFERENCESPECIES]
>> CHROMOSOME 83
SYNTENIC BLOCK FROM ENSMOCG00000004435 #0 TO Chmp3 (ENSMOCG00000022847) #30
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM Suclg1 (ENSPEMG00000010810) #1 TO ENSPEMG00000030958 #3 [REVERSED]
DISTANT LINK BETWEEN ENSPEMG00000030958 #660 AND Kcmf1 (ENSPEMG00000029405) #662
SYNTENIC BLOCK FROM Kcmf1 (ENSPEMG00000029405) #4 TO Retsat (ENSPEMG00000011191) #7 [REVERSED]
ADJACENCY BETWEEN Retsat (ENSPEMG00000011191) #7 AND Elmod3 (ENSPEMG00000010510) #10
SYNTENIC BLOCK FROM Elmod3 (ENSPEMG00000010510) #10 TO St3gal5 (ENSPEMG00000022543) #23 [REVERSED]
DISTANT LINK BETWEEN St3gal5 (ENSPEMG00000022543) #641 AND Polr1a (ENSPEMG00000022224) #643
SYNTENIC BLOCK FROM Polr1a (ENSPEMG00000022224) #24 TO Chmp3 (ENSPEMG00000020892) #30 [REVERSED]
> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 0

DISTANT LINK BETWEEN ENSGT00390000015009 #1609 AND ENSGT00950000182995.e.a.a.a.g #311
 [REVERSED]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7 [REVERSED]
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30 [REVERSED]
> Chinese hamster chok1gshd [MODERNSPECIES]
>> CHROMOSOME 242
SYNTENIC BLOCK FROM Suclg1 (ENSCGRG00001007965) #1 TO Dnah6 (ENSCGRG00001001087) #2
DISTANT LINK BETWEEN Dnah6 (ENSCGRG00001001087) #44 AND Tmsb10b (ENSCGRG00001017927) #42
SYNTENIC BLOCK FROM Tmsb10b (ENSCGRG00001017927) #3 TO Retsat (ENSCGRG00001023894) #7
ADJACENCY BETWEEN Retsat (ENSCGRG00001023894) #7 AND Elmod3 (ENSCGRG00001000477) #10
SYNTENIC BLOCK FROM Elmod3 (ENSCGRG00001000477) #10 TO Vamp5 (ENSCGRG00001015261) #16
ADJACENCY BETWEEN Vamp5 (ENSCGRG00001015261) #16 AND Tmem150a (ENSCGRG00001016577) #18

DISTANT LINK BETWEEN Tmem150a (ENSCGRG00001016577) #58 AND 0610030E20Rik (ENSCGRG00001019313) #56
SYNTENIC BLOCK FROM 0610030E20Rik (ENSCGRG00001019313) #19 TO St3gal5 (ENSCGRG00001002527) #23
DISTANT LINK BETWEEN St3gal5 (ENSCGRG00001002527) #64 AND Polr1a (ENSCGRG00001006651) #62
SYNTENIC BLOCK FROM Polr1a (ENSCGRG00001006651) #24 TO Chmp3 (ENSCGRG00001021521) #30
> Golden Hamster [MODERNSPECIES]
>> CHROMOSOME 698
SYNTENIC BLOCK FROM Suclg1 (ENSMAUG00000020136) #1 TO Retsat (ENSMAUG00000005648) #7 [REVERSED]
ADJACENCY BETWEEN Retsat (ENSMAUG00000005648) #7 AND Elmod3 (ENSMAUG00000009226) #10
SYNTENIC BLOCK FROM Elmod3 (ENSMAUG00000009226) #10 TO Capg (ENSMAUG00000001858) #11 [REVERSED]
>> CHROMOSOME 652
 [REVERSED]
DISTANT LINK BETWEEN ENSMAUG00000008159 #21 AND ENSMAUG00000013912 #90
 [REVERSED]
>> CHROMOSOME 675
SYNTENIC BLOCK FROM Sh2d6 (ENSMAUG00000000137) #12 TO Chmp3 (ENSMAUG00000009081) #30 [REVERSED]
> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00940000154761 #2
DISTANT LINK BETWEEN ENSGT00940000154761 #569 AND ENSGT00940000163007 #567
SYNTENIC BLOCK FROM ENSGT00940000163007 #3 TO ENSGT00390000017613 #7
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Rat [MODERNSPECIES]
>> CHROMOSOME 1

DISTANT LINK BETWEEN Tmsb10-ps6 (ENSRNOG00000036921) #1458 AND Ccdc43 (ENSRNOG00000002748) #1171

>> CHROMOSOME 14
SYNTENIC BLOCK FROM Suclg1 (ENSRNOG00000005587) #1 TO Dnah6 (ENSRNOG00000015581) #2 [REVERSED]
DISTANT LINK BETWEEN Dnah6 (ENSRNOG00000015581) #808 AND Kcmf1 (ENSRNOG00000015097) #810
SYNTENIC BLOCK FROM Kcmf1 (ENSRNOG00000015097) #4 TO Retsat (ENSRNOG00000014090) #7 [REVERSED]
ADJACENCY BETWEEN Retsat (ENSRNOG00000014090) #7 AND Elmod3 (ENSRNOG00000038102) #10
SYNTENIC BLOCK FROM Elmod3 (ENSRNOG00000038102) #10 TO Atoh8 (ENSRNOG00000010716) #22 [REVERSED]
DISTANT LINK BETWEEN Atoh8 (ENSRNOG00000010716) #790 AND St3gal5 (ENSRNOG00000010284) #792
SYNTENIC BLOCK FROM St3gal5 (ENSRNOG00000010284) #23 TO Chmp3 (ENSRNOG00000007356) #30 [REVERSED]
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00940000154761 #2
DISTANT LINK BETWEEN ENSGT00940000154761 #583 AND ENSGT00940000163007 #581
SYNTENIC BLOCK FROM ENSGT00940000163007 #3 TO ENSGT00390000017613 #7
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM Suclg1 (MGP_PahariEiJ_G0022250) #1 TO Dnah6 (MGP_PahariEiJ_G0022249) #2 [REVERSED]
DISTANT LINK BETWEEN Dnah6 (MGP_PahariEiJ_G0022249) #591 AND Kcmf1 (MGP_PahariEiJ_G0022247) #593
SYNTENIC BLOCK FROM Kcmf1 (MGP_PahariEiJ_G0022247) #4 TO Retsat (MGP_PahariEiJ_G0022244) #7 [REVERSED]
ADJACENCY BETWEEN Retsat (MGP_PahariEiJ_G0022244) #7 AND Elmod3 (MGP_PahariEiJ_G0022243) #10
SYNTENIC BLOCK FROM Elmod3 (MGP_PahariEiJ_G0022243) #10 TO Vamp8 (MGP_PahariEiJ_G0022238) #15 [REVERSED]
DISTANT LINK BETWEEN Vamp8 (MGP_PahariEiJ_G0022238) #580 AND Tmem150a (MGP_PahariEiJ_G0022236) #582
SYNTENIC BLOCK FROM Tmem150a (MGP_PahariEiJ_G0022236) #18 TO Chmp3 (MGP_PahariEiJ_G0022224) #30 [REVERSED]
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00940000154761 #2
DISTANT LINK BETWEEN ENSGT00940000154761 #585 AND ENSGT00940000163007 #583
SYNTENIC BLOCK FROM ENSGT00940000163007 #3 TO ENSGT00390000017613 #7
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM Suclg1 (MGP_CAROLIEiJ_G0028515) #1 TO Dnah6 (MGP_CAROLIEiJ_G0028514) #2 [REVERSED]
DISTANT LINK BETWEEN Dnah6 (MGP_CAROLIEiJ_G0028514) #504 AND Kcmf1 (MGP_CAROLIEiJ_G0028512) #506
SYNTENIC BLOCK FROM Kcmf1 (MGP_CAROLIEiJ_G0028512) #4 TO Retsat (MGP_CAROLIEiJ_G0028509) #7 [REVERSED]
ADJACENCY BETWEEN Retsat (MGP_CAROLIEiJ_G0028509) #7 AND Elmod3 (MGP_CAROLIEiJ_G0028508) #10
SYNTENIC BLOCK FROM Elmod3 (MGP_CAROLIEiJ_G0028508) #10 TO Chmp3 (MGP_CAROLIEiJ_G0028488) #30 [REVERSED]
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> spretus [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM Suclg1 (MGP_SPRETEiJ_G0029520) #1 TO Dnah6 (MGP_SPRETEiJ_G0029519) #2 [REVERSED]
DISTANT LINK BETWEEN Dnah6 (MGP_SPRETEiJ_G0029519) #534 AND Kcmf1 (MGP_SPRETEiJ_G0029517) #536
SYNTENIC BLOCK FROM Kcmf1 (MGP_SPRETEiJ_G0029517) #4 TO Retsat (MGP_SPRETEiJ_G0029514) #7 [REVERSED]
ADJACENCY BETWEEN Retsat (MGP_SPRETEiJ_G0029514) #7 AND Elmod3 (MGP_SPRETEiJ_G0029513) #10
SYNTENIC BLOCK FROM Elmod3 (MGP_SPRETEiJ_G0029513) #10 TO Vamp5 (MGP_SPRETEiJ_G0029507) #16 [REVERSED]
DISTANT LINK BETWEEN Vamp5 (MGP_SPRETEiJ_G0029507) #522 AND Tmem150a (MGP_SPRETEiJ_G0029505) #524
SYNTENIC BLOCK FROM Tmem150a (MGP_SPRETEiJ_G0029505) #18 TO Chmp3 (MGP_SPRETEiJ_G0029493) #30 [REVERSED]
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 3287

DISTANT LINK BETWEEN Suclg1 (ENSMSIG00000007008) #9 AND Dnah6 (ENSMSIG00000007091) #6
SYNTENIC BLOCK FROM Dnah6 (ENSMSIG00000007091) #2 TO Retsat (ENSMSIG00000007552) #7
ADJACENCY BETWEEN Retsat (ENSMSIG00000007552) #7 AND Elmod3 (ENSMSIG00000007675) #10
SYNTENIC BLOCK FROM Elmod3 (ENSMSIG00000007675) #10 TO St3gal5 (ENSMSIG00000008306) #23
DISTANT LINK BETWEEN St3gal5 (ENSMSIG00000008306) #30 AND Polr1a (ENSMSIG00000008358) #28
SYNTENIC BLOCK FROM Polr1a (ENSMSIG00000008358) #24 TO Chmp3 (ENSMSIG00000009624) #30
> Mouse [MODERNSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM Suclg1 (ENSMUSG00000052738) #1 TO Dnah6 (ENSMUSG00000052861) #2 [REVERSED]
DISTANT LINK BETWEEN Dnah6 (ENSMUSG00000052861) #613 AND Kcmf1 (ENSMUSG00000055239) #615
SYNTENIC BLOCK FROM Kcmf1 (ENSMUSG00000055239) #4 TO Retsat (ENSMUSG00000056666) #7 [REVERSED]
ADJACENCY BETWEEN Retsat (ENSMUSG00000056666) #7 AND Elmod3 (ENSMUSG00000056698) #10
SYNTENIC BLOCK FROM Elmod3 (ENSMUSG00000056698) #10 TO Vamp5 (ENSMUSG00000073002) #16 [REVERSED]
DISTANT LINK BETWEEN Vamp5 (ENSMUSG00000073002) #601 AND Tmem150a (ENSMUSG00000055912) #603
SYNTENIC BLOCK FROM Tmem150a (ENSMUSG00000055912) #18 TO Chmp3 (ENSMUSG00000053119) #30 [REVERSED]
> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 1096

DISTANT LINK BETWEEN Suclg1 (ENSNGAG00000015283) #5 AND Dnah6 (ENSNGAG00000013760) #3
SYNTENIC BLOCK FROM Dnah6 (ENSNGAG00000013760) #2 TO Tcf7l1 (ENSNGAG00000020122) #5
ADJACENCY BETWEEN Tcf7l1 (ENSNGAG00000020122) #5 AND Retsat (ENSNGAG00000007772) #7

ADJACENCY BETWEEN Retsat (ENSNGAG00000007772) #7 AND Elmod3 (ENSNGAG00000017699) #10
SYNTENIC BLOCK FROM Elmod3 (ENSNGAG00000017699) #10 TO Atoh8 (ENSNGAG00000017424) #22
DISTANT LINK BETWEEN Atoh8 (ENSNGAG00000017424) #24 AND St3gal5 (ENSNGAG00000020246) #22

>> CHROMOSOME 965
SYNTENIC BLOCK FROM Polr1a (ENSNGAG00000017907) #24 TO Kdm3a (ENSNGAG00000014242) #29 [REVERSED]
DISTANT LINK BETWEEN Kdm3a (ENSNGAG00000014242) #7 AND Chmp3 (ENSNGAG00000001448) #9
 [REVERSED]
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 77
 [REVERSED]
DISTANT LINK BETWEEN Suclg1 (ENSJJAG00000023782) #40 AND Dnah6 (ENSJJAG00000013999) #42
SYNTENIC BLOCK FROM Dnah6 (ENSJJAG00000013999) #2 TO ENSJJAG00000009987 #3 [REVERSED]
DISTANT LINK BETWEEN ENSJJAG00000009987 #37 AND Kcmf1 (ENSJJAG00000020771) #39
 [REVERSED]
DISTANT LINK BETWEEN Kcmf1 (ENSJJAG00000020771) #35 AND Tcf7l1 (ENSJJAG00000023485) #37
 [REVERSED]
DISTANT LINK BETWEEN Tcf7l1 (ENSJJAG00000023485) #33 AND Retsat (ENSJJAG00000018206) #35
 [REVERSED]
ADJACENCY BETWEEN Retsat (ENSJJAG00000018206) #7 AND Elmod3 (ENSJJAG00000015903) #10
SYNTENIC BLOCK FROM Elmod3 (ENSJJAG00000015903) #10 TO Tmem150a (ENSJJAG00000015485) #18 [REVERSED]
ADJACENCY BETWEEN Tmem150a (ENSJJAG00000015485) #18 AND Sftpb (ENSJJAG00000020339) #21
SYNTENIC BLOCK FROM Sftpb (ENSJJAG00000020339) #21 TO Immt (ENSJJAG00000015348) #26 [REVERSED]
ADJACENCY BETWEEN Immt (ENSJJAG00000015348) #26 AND Reep1 (ENSJJAG00000021695) #28
SYNTENIC BLOCK FROM Reep1 (ENSJJAG00000021695) #28 TO ENSJJAG00000016934 #30 [REVERSED]
> Kangaroo rat [MODERNSPECIES]
>> CHROMOSOME 530
SYNTENIC BLOCK FROM ENSDORG00000025978 #26 TO Chmp3 (ENSDORG00000002851) #30 [REVERSED]
>> CHROMOSOME 528
SYNTENIC BLOCK FROM Suclg1 (ENSDORG00000010991) #1 TO Tcf7l1 (ENSDORG00000013753) #5
ADJACENCY BETWEEN Tcf7l1 (ENSDORG00000013753) #5 AND Retsat (ENSDORG00000009720) #7

ADJACENCY BETWEEN Retsat (ENSDORG00000009720) #7 AND Elmod3 (ENSDORG00000009721) #10
SYNTENIC BLOCK FROM Elmod3 (ENSDORG00000009721) #10 TO ENSDORG00000001073 #26
> Rodentia_A [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7

DISTANT LINK BETWEEN ENSGT00950000182995.e.a.a.a #434 AND ENSGT00390000009488 #36
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Hystricomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Hystricomorpha_a [ANCESTRALSPECIES]
>> CHROMOSOME 35
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00390000017613 #7
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Guinea pig [MODERNSPECIES]
>> CHROMOSOME 37
SYNTENIC BLOCK FROM SUCLG1 (ENSCPOG00000003017) #1 TO DNAH6 (ENSCPOG00000015041) #2 [REVERSED]
ADJACENCY BETWEEN DNAH6 (ENSCPOG00000015041) #2 AND KCMF1 (ENSCPOG00000023050) #4
SYNTENIC BLOCK FROM KCMF1 (ENSCPOG00000023050) #4 TO RETSAT (ENSCPOG00000022640) #7 [REVERSED]
ADJACENCY BETWEEN RETSAT (ENSCPOG00000022640) #7 AND ELMOD3 (ENSCPOG00000007973) #10
SYNTENIC BLOCK FROM ELMOD3 (ENSCPOG00000007973) #10 TO CHMP3 (ENSCPOG00000001723) #30 [REVERSED]
> Hystricomorpha_b [ANCESTRALSPECIES]
>> CHROMOSOME 33
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00940000157038 #5
ADJACENCY BETWEEN ENSGT00940000157038 #5 AND ENSGT00390000017613 #7

ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Degu [MODERNSPECIES]
>> CHROMOSOME 203
SYNTENIC BLOCK FROM SUCLG1 (ENSODEG00000002195) #1 TO TCF7L1 (ENSODEG00000003559) #5 [REVERSED]
ADJACENCY BETWEEN TCF7L1 (ENSODEG00000003559) #5 AND RETSAT (ENSODEG00000003469) #7
 [REVERSED]
ADJACENCY BETWEEN RETSAT (ENSODEG00000003469) #7 AND ELMOD3 (ENSODEG00000003393) #10
SYNTENIC BLOCK FROM ELMOD3 (ENSODEG00000003393) #10 TO CAPG (ENSODEG00000003321) #11 [REVERSED]
DISTANT LINK BETWEEN CAPG (ENSODEG00000003321) #37 AND SH2D6 (ENSODEG00000003239) #39
SYNTENIC BLOCK FROM SH2D6 (ENSODEG00000003239) #12 TO ST3GAL5 (ENSODEG00000003647) #23 [REVERSED]
DISTANT LINK BETWEEN ST3GAL5 (ENSODEG00000003647) #24 AND POLR1A (ENSODEG00000003542) #26
SYNTENIC BLOCK FROM POLR1A (ENSODEG00000003542) #24 TO ENSODEG00000003034 #30 [REVERSED]
> Long-tailed chinchilla [MODERNSPECIES]
>> CHROMOSOME 131
SYNTENIC BLOCK FROM SUCLG1 (ENSCLAG00000008580) #1 TO TCF7L1 (ENSCLAG00000007414) #5 [REVERSED]
ADJACENCY BETWEEN TCF7L1 (ENSCLAG00000007414) #5 AND RETSAT (ENSCLAG00000008939) #7
 [REVERSED]
ADJACENCY BETWEEN RETSAT (ENSCLAG00000008939) #7 AND ELMOD3 (ENSCLAG00000009003) #10
SYNTENIC BLOCK FROM ELMOD3 (ENSCLAG00000009003) #10 TO CHMP3 (ENSCLAG00000009289) #30 [REVERSED]
> Naked mole-rat female [MODERNSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM SUCLG1 (ENSHGLG00000047475) #1 TO ENSHGLG00000036565 #4
DISTANT LINK BETWEEN ENSHGLG00000036565 #899 AND TCF7L1 (ENSHGLG00000044140) #897
SYNTENIC BLOCK FROM TCF7L1 (ENSHGLG00000044140) #5 TO RETSAT (ENSHGLG00000009788) #7
ADJACENCY BETWEEN RETSAT (ENSHGLG00000009788) #7 AND ENSHGLG00000005816 #10

DISTANT LINK BETWEEN ENSHGLG00000005816 #904 AND CAPG (ENSHGLG00000004995) #902
SYNTENIC BLOCK FROM CAPG (ENSHGLG00000004995) #11 TO SFTPB (ENSHGLG00000016430) #21
DISTANT LINK BETWEEN SFTPB (ENSHGLG00000016430) #916 AND ATOH8 (ENSHGLG00000013394) #914
SYNTENIC BLOCK FROM ATOH8 (ENSHGLG00000013394) #22 TO ST3GAL5 (ENSHGLG00000015817) #23
DISTANT LINK BETWEEN ST3GAL5 (ENSHGLG00000015817) #919 AND ENSHGLG00000006334 #917
SYNTENIC BLOCK FROM ENSHGLG00000006334 #24 TO IMMT (ENSHGLG00000004647) #26
DISTANT LINK BETWEEN IMMT (ENSHGLG00000004647) #923 AND MRPL35 (ENSHGLG00000042289) #921
SYNTENIC BLOCK FROM MRPL35 (ENSHGLG00000042289) #27 TO REEP1 (ENSHGLG00000033995) #28
DISTANT LINK BETWEEN REEP1 (ENSHGLG00000033995) #926 AND KDM3A (ENSHGLG00000008133) #924
SYNTENIC BLOCK FROM KDM3A (ENSHGLG00000008133) #29 TO CHMP3 (ENSHGLG00000007476) #30
> Sciuridae [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00940000154761 #2
DISTANT LINK BETWEEN ENSGT00940000154761 #432 AND ENSGT00940000163007 #430



 [REVERSED]
>> CHROMOSOME 53
SYNTENIC BLOCK FROM ENSGT00940000157038 #5 TO ENSGT00390000017613 #7 [REVERSED]
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30 [REVERSED]
> Eurasian red squirrel [MODERNSPECIES]
>> CHROMOSOME 156
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 2
 [REVERSED]

>> CHROMOSOME 5
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSSVLG00005021194 #44 AND TCF7L1 (ENSSVLG00005017741) #422
SYNTENIC BLOCK FROM TCF7L1 (ENSSVLG00005017741) #5 TO RETSAT (ENSSVLG00005017559) #7 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSSVLG00005019056 #41 AND ELMOD3 (ENSSVLG00005017414) #747
SYNTENIC BLOCK FROM ELMOD3 (ENSSVLG00005017414) #10 TO CAPG (ENSSVLG00005017210) #11 [REVERSED]
DISTANT LINK BETWEEN CAPG (ENSSVLG00005017210) #38 AND SH2D6 (ENSSVLG00005016979) #40
SYNTENIC BLOCK FROM SH2D6 (ENSSVLG00005016979) #12 TO MAT2A (ENSSVLG00005016926) #13 [REVERSED]
DISTANT LINK BETWEEN MAT2A (ENSSVLG00005016926) #35 AND GGCX (ENSSVLG00005016698) #37
SYNTENIC BLOCK FROM GGCX (ENSSVLG00005016698) #14 TO CHMP3 (ENSSVLG00005016280) #30 [REVERSED]
> Marmotini [ANCESTRALSPECIES]
>> CHROMOSOME 79
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00940000154761 #2
DISTANT LINK BETWEEN ENSGT00940000154761 #44 AND ENSGT00940000163007 #42



>> CHROMOSOME 86
SYNTENIC BLOCK FROM ENSGT00940000157038 #5 TO ENSGT00390000017613 #7
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00950000182832.C #30
> Alpin marmot [MODERNSPECIES]
>> CHROMOSOME 64
SYNTENIC BLOCK FROM SUCLG1 (ENSMMMG00000005730) #1 TO DNAH6 (ENSMMMG00000005746) #2
ADJACENCY BETWEEN DNAH6 (ENSMMMG00000005746) #2 AND ENSMMMG00000006063 #4

>> CHROMOSOME 118
SYNTENIC BLOCK FROM TCF7L1 (ENSMMMG00000007633) #5 TO RETSAT (ENSMMMG00000007689) #7
ADJACENCY BETWEEN RETSAT (ENSMMMG00000007689) #7 AND ENSMMMG00000007785 #10
SYNTENIC BLOCK FROM ENSMMMG00000007785 #10 TO TMEM150A (ENSMMMG00000008189) #18
DISTANT LINK BETWEEN TMEM150A (ENSMMMG00000008189) #23 AND ENSMMMG00000008853 #21


DISTANT LINK BETWEEN USP39 (ENSMMMG00000008203) #24 AND SFTPB (ENSMMMG00000008881) #22

ADJACENCY BETWEEN SFTPB (ENSMMMG00000008881) #21 AND ST3GAL5 (ENSMMMG00000008911) #23
SYNTENIC BLOCK FROM ST3GAL5 (ENSMMMG00000008911) #23 TO CHMP3 (ENSMMMG00000009359) #30
> Marmotini_b [ANCESTRALSPECIES]
>> CHROMOSOME 303
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00510000047171.n #4
>> CHROMOSOME 128
SYNTENIC BLOCK FROM ENSGT00940000157038 #5 TO ENSGT00390000017613 #7
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00940000161711 #21
DISTANT LINK BETWEEN ENSGT00940000161711 #19 AND ENSGT00940000161151 #17
SYNTENIC BLOCK FROM ENSGT00940000161151 #22 TO ENSGT00950000182832.C #30
> Squirrel [MODERNSPECIES]
>> CHROMOSOME 312
SYNTENIC BLOCK FROM TCF7L1 (ENSSTOG00000021988) #5 TO RETSAT (ENSSTOG00000026131) #7 [REVERSED]
ADJACENCY BETWEEN RETSAT (ENSSTOG00000026131) #7 AND ELMOD3 (ENSSTOG00000009420) #10
SYNTENIC BLOCK FROM ELMOD3 (ENSSTOG00000009420) #10 TO SFTPB (ENSSTOG00000026197) #21 [REVERSED]
DISTANT LINK BETWEEN SFTPB (ENSSTOG00000026197) #22 AND ATOH8 (ENSSTOG00000006538) #24
SYNTENIC BLOCK FROM ATOH8 (ENSSTOG00000006538) #22 TO ST3GAL5 (ENSSTOG00000024816) #23 [REVERSED]
DISTANT LINK BETWEEN ST3GAL5 (ENSSTOG00000024816) #19 AND POLR1A (ENSSTOG00000012580) #21
SYNTENIC BLOCK FROM POLR1A (ENSSTOG00000012580) #24 TO CHMP3 (ENSSTOG00000025099) #30 [REVERSED]
>> CHROMOSOME 250
SYNTENIC BLOCK FROM SUCLG1 (ENSSTOG00000016550) #1 TO DNAH6 (ENSSTOG00000028220) #2
DISTANT LINK BETWEEN DNAH6 (ENSSTOG00000028220) #19 AND KCMF1 (ENSSTOG00000003527) #16

> Arctic ground squirrel [MODERNSPECIES]
>> CHROMOSOME 609
SYNTENIC BLOCK FROM TCF7L1 (ENSUPAG00010018088) #5 TO RETSAT (ENSUPAG00010018105) #7
ADJACENCY BETWEEN RETSAT (ENSUPAG00010018105) #7 AND ELMOD3 (ENSUPAG00010018158) #10
SYNTENIC BLOCK FROM ELMOD3 (ENSUPAG00010018158) #10 TO ENSUPAG00010000192 #16
DISTANT LINK BETWEEN ENSUPAG00010000192 #14 AND RNF181 (ENSUPAG00010000242) #12


DISTANT LINK BETWEEN TMEM150A (ENSUPAG00010000226) #15 AND ENSUPAG00010000260 #13
SYNTENIC BLOCK FROM ENSUPAG00010000260 #19 TO SFTPB (ENSUPAG00010000319) #21
>> CHROMOSOME 596
SYNTENIC BLOCK FROM SUCLG1 (ENSUPAG00010011371) #1 TO DNAH6 (ENSUPAG00010011186) #2 [REVERSED]
DISTANT LINK BETWEEN DNAH6 (ENSUPAG00010011186) #1 AND TMSB10 (ENSUPAG00010011173) #3
SYNTENIC BLOCK FROM TMSB10 (ENSUPAG00010011173) #3 TO KCMF1 (ENSUPAG00010011161) #4 [REVERSED]
>> CHROMOSOME 424
SYNTENIC BLOCK FROM ATOH8 (ENSUPAG00010022897) #22 TO ST3GAL5 (ENSUPAG00010022898) #23
DISTANT LINK BETWEEN ST3GAL5 (ENSUPAG00010022898) #3 AND POLR1A (ENSUPAG00010022904) #1
SYNTENIC BLOCK FROM POLR1A (ENSUPAG00010022904) #24 TO CHMP3 (ENSUPAG00010022957) #30
> Lagomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 47
SYNTENIC BLOCK FROM ENSGT00940000156351 #1 TO ENSGT00940000154761 #2 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000154761 #37 AND ENSGT00940000163007 #39
SYNTENIC BLOCK FROM ENSGT00940000163007 #3 TO ENSGT00390000017613 #7 [REVERSED]
ADJACENCY BETWEEN ENSGT00390000017613 #7 AND ENSGT00390000009488 #10
SYNTENIC BLOCK FROM ENSGT00390000009488 #10 TO ENSGT00940000159305 #11 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000159305 #29 AND ENSGT00950000183185.c.a.a #31
SYNTENIC BLOCK FROM ENSGT00950000183185.c.a.a #13 TO ENSGT00950000182832.C #30 [REVERSED]
> Pika [MODERNSPECIES]
>> CHROMOSOME 2775

ADJACENCY BETWEEN TCF7L1 (ENSOPRG00000014672) #5 AND RETSAT (ENSOPRG00000014695) #7

ADJACENCY BETWEEN RETSAT (ENSOPRG00000014695) #7 AND ELMOD3 (ENSOPRG00000014718) #10
SYNTENIC BLOCK FROM ELMOD3 (ENSOPRG00000014718) #10 TO CAPG (ENSOPRG00000014744) #11
>> CHROMOSOME 2590
SYNTENIC BLOCK FROM POLR1A (ENSOPRG00000008269) #24 TO ENSOPRG00000008381 #26
>> CHROMOSOME 417
SYNTENIC BLOCK FROM KDM3A (ENSOPRG00000002126) #29 TO CHMP3 (ENSOPRG00000002191) #30
>> CHROMOSOME 3193
SYNTENIC BLOCK FROM MAT2A (ENSOPRG00000001898) #13 TO VAMP8 (ENSOPRG00000001958) #15
DISTANT LINK BETWEEN VAMP8 (ENSOPRG00000001958) #4 AND RNF181 (ENSOPRG00000001980) #2
SYNTENIC BLOCK FROM RNF181 (ENSOPRG00000001980) #17 TO SFTPB (ENSOPRG00000002060) #21
ADJACENCY BETWEEN SFTPB (ENSOPRG00000002060) #21 AND ST3GAL5 (ENSOPRG00000002085) #23

>> CHROMOSOME 1145
SYNTENIC BLOCK FROM MRPL35 (ENSOPRG00000016834) #27 TO REEP1 (ENSOPRG00000016839) #28
>> CHROMOSOME 2774
SYNTENIC BLOCK FROM SUCLG1 (ENSOPRG00000008862) #1 TO ENSOPRG00000008869 #2


DISTANT LINK BETWEEN ENSOPRG00000008938 #6 AND KCMF1 (ENSOPRG00000009018) #3

> Rabbit [MODERNSPECIES]
>> CHROMOSOME 11
 [REVERSED]
DISTANT LINK BETWEEN SUCLG1 (ENSOCUG00000003780) #569 AND DNAH6 (ENSOCUG00000010057) #572
SYNTENIC BLOCK FROM DNAH6 (ENSOCUG00000010057) #2 TO TMSB10 (ENSOCUG00000017506) #3 [REVERSED]
DISTANT LINK BETWEEN TMSB10 (ENSOCUG00000017506) #565 AND ENSOCUG00000002533 #568
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSOCUG00000035044 #564 AND TCF7L1 (ENSOCUG00000008749) #566
SYNTENIC BLOCK FROM TCF7L1 (ENSOCUG00000008749) #5 TO RETSAT (ENSOCUG00000026865) #7 [REVERSED]
ADJACENCY BETWEEN RETSAT (ENSOCUG00000026865) #7 AND ELMOD3 (ENSOCUG00000002332) #10
SYNTENIC BLOCK FROM ELMOD3 (ENSOCUG00000002332) #10 TO CAPG (ENSOCUG00000002341) #11 [REVERSED]
DISTANT LINK BETWEEN CAPG (ENSOCUG00000002341) #558 AND MAT2A (ENSOCUG00000002361) #560
SYNTENIC BLOCK FROM MAT2A (ENSOCUG00000002361) #13 TO ENSOCUG00000007951 #17 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSOCUG00000023783 #553 AND TMEM150A (ENSOCUG00000007956) #573
SYNTENIC BLOCK FROM TMEM150A (ENSOCUG00000007956) #18 TO IMMT (ENSOCUG00000010178) #26 [REVERSED]
DISTANT LINK BETWEEN IMMT (ENSOCUG00000010178) #543 AND MRPL35 (ENSOCUG00000010193) #545
SYNTENIC BLOCK FROM MRPL35 (ENSOCUG00000010193) #27 TO REEP1 (ENSOCUG00000010196) #28 [REVERSED]
DISTANT LINK BETWEEN REEP1 (ENSOCUG00000010196) #540 AND KDM3A (ENSOCUG00000010324) #542
 [REVERSED]
> Tree shrew [MODERNSPECIES]
>> CHROMOSOME 1424
SYNTENIC BLOCK FROM IMMT (ENSTBEG00000015335) #26 TO CHMP3 (ENSTBEG00000015796) #30
>> CHROMOSOME 7527
 [REVERSED]
ADJACENCY BETWEEN RETSAT (ENSTBEG00000000745) #7 AND ELMOD3 (ENSTBEG00000009063) #10
 [REVERSED]
>> CHROMOSOME 3594
SYNTENIC BLOCK FROM ATOH8 (ENSTBEG00000008003) #22 TO ST3GAL5 (ENSTBEG00000008348) #23
>> CHROMOSOME 3101
SYNTENIC BLOCK FROM SUCLG1 (ENSTBEG00000008403) #1 TO ENSTBEG00000008803 #2

>> CHROMOSOME 3596
SYNTENIC BLOCK FROM MAT2A (ENSTBEG00000008919) #13 TO GGCX (ENSTBEG00000009183) #14
DISTANT LINK BETWEEN GGCX (ENSTBEG00000009183) #3 AND VAMP5 (ENSTBEG00000001360) #1

ADJACENCY BETWEEN VAMP5 (ENSTBEG00000001360) #16 AND TMEM150A (ENSTBEG00000001709) #18
SYNTENIC BLOCK FROM TMEM150A (ENSTBEG00000001709) #18 TO USP39 (ENSTBEG00000003652) #20
>> CHROMOSOME 3200
SYNTENIC BLOCK FROM POLR1A (ENSTBEG00000008646) #24 TO PTCD3 (ENSTBEG00000002542) #25