> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 20





























> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 18





























> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 20
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00950000182904.a.a.b #0 TO ENSGT00530000063351.b #14 [REVERSED]
ADJACENCY BETWEEN ENSGT00530000063351.b #14 AND ENSGT00530000063351.a.a.y.a.a.a #16
SYNTENIC BLOCK FROM ENSGT00530000063351.a.a.y.a.a.a #16 TO ENSGT01100000263479.D.a.c.b.a.a #18 [REVERSED]
ADJACENCY BETWEEN ENSGT01100000263479.D.a.c.b.a.a #18 AND ENSGT00530000063351.a.b #20
SYNTENIC BLOCK FROM ENSGT00530000063351.a.b #20 TO ENSGT00940000160115 #30 [REVERSED]
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00950000182904.a.a.b #0 TO ENSGT00530000063351.b #14 [REVERSED]
ADJACENCY BETWEEN ENSGT00530000063351.b #14 AND ENSGT00530000063351.a.a.y.a.a.a #16
SYNTENIC BLOCK FROM ENSGT00530000063351.a.a.y.a.a.a #16 TO ENSGT01100000263479.D.a.c.b.a.a #18 [REVERSED]
ADJACENCY BETWEEN ENSGT01100000263479.D.a.c.b.a.a #18 AND ENSGT00530000063351.a.b #20
SYNTENIC BLOCK FROM ENSGT00530000063351.a.b #20 TO ENSGT00940000160115 #30 [REVERSED]
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM ENSGT00950000182904.a.a.b #0 TO ENSGT00530000063351.b #14 [REVERSED]
ADJACENCY BETWEEN ENSGT00530000063351.b #14 AND ENSGT00530000063351.a.a.y.a.a.a #16
SYNTENIC BLOCK FROM ENSGT00530000063351.a.a.y.a.a.a #16 TO ENSGT01100000263479.D.a.c.b.a.a #18 [REVERSED]
ADJACENCY BETWEEN ENSGT01100000263479.D.a.c.b.a.a #18 AND ENSGT00530000063351.a.b #20
SYNTENIC BLOCK FROM ENSGT00530000063351.a.b #20 TO ENSGT00940000160115 #30 [REVERSED]
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 89
SYNTENIC BLOCK FROM ENSGT00530000063351.a.a.z #17 TO ENSGT01100000263479.D.a.c.b.a.a #18
>> CHROMOSOME 0
SYNTENIC BLOCK FROM ENSGT00950000182904.a.a.b #0 TO ENSGT00530000063351.a.a.y.a.a.b #15 [REVERSED]
ADJACENCY BETWEEN ENSGT00530000063351.a.a.y.a.a.b #15 AND ENSGT00530000063351.a.b #20
SYNTENIC BLOCK FROM ENSGT00530000063351.a.b #20 TO ENSGT00940000160115 #30 [REVERSED]
> Mouse [REFERENCESPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM Kcnn4 (ENSMUSG00000054342) #0 TO Pou2f2 (ENSMUSG00000008496) #30
> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSGT00950000182904.a.a.b #0 TO ENSGT00390000006595 #5
ADJACENCY BETWEEN ENSGT00390000006595 #5 AND ENSGT00510000048991 #7
SYNTENIC BLOCK FROM ENSGT00510000048991 #7 TO ENSGT00530000063351.b #14
DISTANT LINK BETWEEN ENSGT00530000063351.b #306 AND ENSGT00530000063351.a.a.y.a.a.a #304


DISTANT LINK BETWEEN ENSGT00530000063351.a.a.z #308 AND ENSGT00530000063351.a.b #305
SYNTENIC BLOCK FROM ENSGT00530000063351.a.b #20 TO ENSGT00940000160115 #30
> spretus [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM Kcnn4 (MGP_SPRETEiJ_G0030426) #0 TO Zfp428 (MGP_SPRETEiJ_G0030431) #5
ADJACENCY BETWEEN Zfp428 (MGP_SPRETEiJ_G0030431) #5 AND Irgq (MGP_SPRETEiJ_G0030432) #7
SYNTENIC BLOCK FROM Irgq (MGP_SPRETEiJ_G0030432) #7 TO Tex101 (MGP_SPRETEiJ_G0030439) #14
DISTANT LINK BETWEEN Tex101 (MGP_SPRETEiJ_G0030439) #304 AND Lypd11 (MGP_SPRETEiJ_G0030441) #302
SYNTENIC BLOCK FROM Lypd11 (MGP_SPRETEiJ_G0030441) #16 TO Cd177 (MGP_SPRETEiJ_G0030442) #17
DISTANT LINK BETWEEN Cd177 (MGP_SPRETEiJ_G0030442) #307 AND Lypd4 (MGP_SPRETEiJ_G0030444) #305
SYNTENIC BLOCK FROM Lypd4 (MGP_SPRETEiJ_G0030444) #20 TO Arhgef1 (MGP_SPRETEiJ_G0030448) #24
ADJACENCY BETWEEN Arhgef1 (MGP_SPRETEiJ_G0030448) #24 AND Rabac1 (MGP_SPRETEiJ_G0030450) #26
SYNTENIC BLOCK FROM Rabac1 (MGP_SPRETEiJ_G0030450) #26 TO Pou2f2 (MGP_SPRETEiJ_G0030454) #30
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 2675


DISTANT LINK BETWEEN ENSMSIG00000009344 #4 AND Lypd4 (ENSMSIG00000009428) #1
SYNTENIC BLOCK FROM Lypd4 (ENSMSIG00000009428) #20 TO Grik5 (ENSMSIG00000010580) #28
DISTANT LINK BETWEEN Grik5 (ENSMSIG00000010580) #14 AND Zfp574 (ENSMSIG00000010639) #12
SYNTENIC BLOCK FROM Zfp574 (ENSMSIG00000010639) #29 TO Pou2f2 (ENSMSIG00000010661) #30
>> CHROMOSOME 2922
SYNTENIC BLOCK FROM Kcnn4 (ENSMSIG00000000335) #0 TO Irgc1 (ENSMSIG00000000162) #2 [REVERSED]
ADJACENCY BETWEEN Irgc1 (ENSMSIG00000000162) #2 AND Plaur (ENSMSIG00000000090) #3

SYNTENIC BLOCK FROM ENSMSIG00000023452 #4 TO Zfp428 (ENSMSIG00000023443) #5 [REVERSED]
ADJACENCY BETWEEN Zfp428 (ENSMSIG00000023443) #5 AND Irgq (ENSMSIG00000023429) #7
SYNTENIC BLOCK FROM Irgq (ENSMSIG00000023429) #7 TO Ethe1 (ENSMSIG00000023315) #11 [REVERSED]
DISTANT LINK BETWEEN Ethe1 (ENSMSIG00000023315) #3 AND ENSMSIG00000023286 #5
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN Phldb3 (ENSMSIG00000023295) #2 AND Lypd3 (ENSMSIG00000023271) #4
SYNTENIC BLOCK FROM Lypd3 (ENSMSIG00000023271) #13 TO Tex101 (ENSMSIG00000023253) #14 [REVERSED]
ADJACENCY BETWEEN Tex101 (ENSMSIG00000023253) #14 AND ENSMSIG00000023238 #16
 [REVERSED]
> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM Kcnn4 (MGP_CAROLIEiJ_G0029332) #0 TO Zfp428 (MGP_CAROLIEiJ_G0029337) #5
ADJACENCY BETWEEN Zfp428 (MGP_CAROLIEiJ_G0029337) #5 AND Irgq (MGP_CAROLIEiJ_G0029338) #7
SYNTENIC BLOCK FROM Irgq (MGP_CAROLIEiJ_G0029338) #7 TO Tex101 (MGP_CAROLIEiJ_G0029345) #14
ADJACENCY BETWEEN Tex101 (MGP_CAROLIEiJ_G0029345) #14 AND Ceacam10 (MGP_CAROLIEiJ_G0029346) #18

ADJACENCY BETWEEN Ceacam10 (MGP_CAROLIEiJ_G0029346) #18 AND Lypd4 (MGP_CAROLIEiJ_G0029347) #20
SYNTENIC BLOCK FROM Lypd4 (MGP_CAROLIEiJ_G0029347) #20 TO Arhgef1 (MGP_CAROLIEiJ_G0029351) #24
ADJACENCY BETWEEN Arhgef1 (MGP_CAROLIEiJ_G0029351) #24 AND Rabac1 (MGP_CAROLIEiJ_G0029353) #26
SYNTENIC BLOCK FROM Rabac1 (MGP_CAROLIEiJ_G0029353) #26 TO Pou2f2 (MGP_CAROLIEiJ_G0029357) #30
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM Kcnn4 (MGP_PahariEiJ_G0021183) #0 TO Zfp428 (MGP_PahariEiJ_G0021188) #5
ADJACENCY BETWEEN Zfp428 (MGP_PahariEiJ_G0021188) #5 AND Irgq (MGP_PahariEiJ_G0021189) #7
SYNTENIC BLOCK FROM Irgq (MGP_PahariEiJ_G0021189) #7 TO Tex101 (MGP_PahariEiJ_G0021196) #14
ADJACENCY BETWEEN Tex101 (MGP_PahariEiJ_G0021196) #14 AND Cd177 (MGP_PahariEiJ_G0021198) #17
SYNTENIC BLOCK FROM Cd177 (MGP_PahariEiJ_G0021198) #17 TO Ceacam10 (MGP_PahariEiJ_G0021199) #18
ADJACENCY BETWEEN Ceacam10 (MGP_PahariEiJ_G0021199) #18 AND Lypd4 (MGP_PahariEiJ_G0021200) #20
SYNTENIC BLOCK FROM Lypd4 (MGP_PahariEiJ_G0021200) #20 TO Dmrtc2 (MGP_PahariEiJ_G0021201) #21
DISTANT LINK BETWEEN Dmrtc2 (MGP_PahariEiJ_G0021201) #247 AND Cd79a (MGP_PahariEiJ_G0021203) #245
SYNTENIC BLOCK FROM Cd79a (MGP_PahariEiJ_G0021203) #23 TO Arhgef1 (MGP_PahariEiJ_G0021204) #24
ADJACENCY BETWEEN Arhgef1 (MGP_PahariEiJ_G0021204) #24 AND MGP_PahariEiJ_G0021206 #26
SYNTENIC BLOCK FROM MGP_PahariEiJ_G0021206 #26 TO Pou2f2 (MGP_PahariEiJ_G0021210) #30
> Rat [MODERNSPECIES]
>> CHROMOSOME 0
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN Ceacam1 (ENSRNOG00000020578) #834 AND Lypd4 (ENSRNOG00000020098) #858
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 29
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 26
 [REVERSED]

SYNTENIC BLOCK FROM ENSGT00530000063351.a.b #20 TO ENSGT00940000161904 #21 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000161904 #21 AND ENSGT00940000154363.A #23
SYNTENIC BLOCK FROM ENSGT00940000154363.A #23 TO ENSGT00940000160115 #30 [REVERSED]
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 41
SYNTENIC BLOCK FROM ENSGT00950000182904.a.a.b #0 TO ENSGT00390000006595 #5 [REVERSED]
ADJACENCY BETWEEN ENSGT00390000006595 #5 AND ENSGT00510000048991 #7
SYNTENIC BLOCK FROM ENSGT00510000048991 #7 TO ENSGT00530000063351.b #14 [REVERSED]
ADJACENCY BETWEEN ENSGT00530000063351.b #14 AND ENSGT00530000063351.a.a.z #17

 [REVERSED]
DISTANT LINK BETWEEN ENSGT01100000263479.D.a.c.b.a.a #0 AND ENSGT00530000063351.a.b #25
SYNTENIC BLOCK FROM ENSGT00530000063351.a.b #20 TO ENSGT00390000013102.f.p #22
DISTANT LINK BETWEEN ENSGT00390000013102.f.p #4 AND ENSGT00940000154363.A #2
SYNTENIC BLOCK FROM ENSGT00940000154363.A #23 TO ENSGT00940000160115 #30
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM Kcnn4 (ENSPEMG00000022131) #0 TO Zfp428 (ENSPEMG00000022485) #5 [REVERSED]
ADJACENCY BETWEEN Zfp428 (ENSPEMG00000022485) #5 AND Irgq (ENSPEMG00000030272) #7
SYNTENIC BLOCK FROM Irgq (ENSPEMG00000030272) #7 TO Tex101 (ENSPEMG00000021573) #14 [REVERSED]
ADJACENCY BETWEEN Tex101 (ENSPEMG00000021573) #14 AND Cd177 (ENSPEMG00000022001) #17

 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSPEMG00000012395 #431 AND Lypd4 (ENSPEMG00000007549) #455
SYNTENIC BLOCK FROM Lypd4 (ENSPEMG00000007549) #20 TO Dmrtc2 (ENSPEMG00000002536) #21
DISTANT LINK BETWEEN Dmrtc2 (ENSPEMG00000002536) #434 AND Cd79a (ENSPEMG00000015673) #432
SYNTENIC BLOCK FROM Cd79a (ENSPEMG00000015673) #23 TO Pou2f2 (ENSPEMG00000019227) #30
> Prairie vole [MODERNSPECIES]
>> CHROMOSOME 354
SYNTENIC BLOCK FROM Kcnn4 (ENSMOCG00000004304) #0 TO Irgc1 (ENSMOCG00000012592) #2
ADJACENCY BETWEEN Irgc1 (ENSMOCG00000012592) #2 AND Cadm4 (ENSMOCG00000016755) #4
SYNTENIC BLOCK FROM Cadm4 (ENSMOCG00000016755) #4 TO ENSMOCG00000012553 #5
ADJACENCY BETWEEN ENSMOCG00000012553 #5 AND Irgq (ENSMOCG00000013018) #7
SYNTENIC BLOCK FROM Irgq (ENSMOCG00000013018) #7 TO ENSMOCG00000015518 #12
DISTANT LINK BETWEEN ENSMOCG00000015518 #174 AND ENSMOCG00000002667 #151
 [REVERSED]
DISTANT LINK BETWEEN ENSMOCG00000002667 #152 AND Lypd4 (ENSMOCG00000008530) #174
SYNTENIC BLOCK FROM Lypd4 (ENSMOCG00000008530) #20 TO Rps19 (ENSMOCG00000022408) #22
ADJACENCY BETWEEN Rps19 (ENSMOCG00000022408) #22 AND Arhgef1 (ENSMOCG00000009746) #24

DISTANT LINK BETWEEN Arhgef1 (ENSMOCG00000009746) #157 AND Rabac1 (ENSMOCG00000002729) #155
SYNTENIC BLOCK FROM Rabac1 (ENSMOCG00000002729) #26 TO Pou2f2 (ENSMOCG00000015602) #30
> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 34

DISTANT LINK BETWEEN ENSGT00530000063351.a.a.z #136 AND ENSGT01100000263479.D.a.c.b.a.a #111
 [REVERSED]
DISTANT LINK BETWEEN ENSGT01100000263479.D.a.c.b.a.a #112 AND ENSGT00530000063351.a.b #136
SYNTENIC BLOCK FROM ENSGT00530000063351.a.b #20 TO ENSGT00940000161904 #21
DISTANT LINK BETWEEN ENSGT00940000161904 #115 AND ENSGT00940000154363.A #113
SYNTENIC BLOCK FROM ENSGT00940000154363.A #23 TO ENSGT00940000160115 #30
>> CHROMOSOME 42
















> Chinese hamster chok1gshd [MODERNSPECIES]
>> CHROMOSOME 295
SYNTENIC BLOCK FROM Lypd4 (ENSCGRG00001023965) #20 TO Dmrtc2 (ENSCGRG00001016626) #21
DISTANT LINK BETWEEN Dmrtc2 (ENSCGRG00001016626) #119 AND Cd79a (ENSCGRG00001018881) #117
SYNTENIC BLOCK FROM Cd79a (ENSCGRG00001018881) #23 TO Pou2f2 (ENSCGRG00001013142) #30
>> CHROMOSOME 328















> Golden Hamster [MODERNSPECIES]
>> CHROMOSOME 863

DISTANT LINK BETWEEN Cd177 (ENSMAUG00000013142) #22 AND ENSMAUG00000000868 #0
 [REVERSED]
DISTANT LINK BETWEEN ENSMAUG00000000868 #1 AND Lypd4 (ENSMAUG00000012812) #22
SYNTENIC BLOCK FROM Lypd4 (ENSMAUG00000012812) #20 TO Dmrtc2 (ENSMAUG00000016876) #21
DISTANT LINK BETWEEN Dmrtc2 (ENSMAUG00000016876) #4 AND Arhgef1 (ENSMAUG00000013887) #2
SYNTENIC BLOCK FROM Arhgef1 (ENSMAUG00000013887) #24 TO Erfl (ENSMAUG00000020529) #25
ADJACENCY BETWEEN Erfl (ENSMAUG00000020529) #25 AND Grik5 (ENSMAUG00000004340) #28
SYNTENIC BLOCK FROM Grik5 (ENSMAUG00000004340) #28 TO Pou2f2 (ENSMAUG00000010807) #30
>> CHROMOSOME 834

ADJACENCY BETWEEN Kcnn4 (ENSMAUG00000008460) #0 AND Irgc1 (ENSMAUG00000007910) #2

ADJACENCY BETWEEN Irgc1 (ENSMAUG00000007910) #2 AND Irgq (ENSMAUG00000017882) #7

ADJACENCY BETWEEN Irgq (ENSMAUG00000017882) #7 AND Xrcc1 (ENSMAUG00000020378) #9
SYNTENIC BLOCK FROM Xrcc1 (ENSMAUG00000020378) #9 TO Zfp575 (ENSMAUG00000021247) #10
ADJACENCY BETWEEN Zfp575 (ENSMAUG00000021247) #10 AND Phldb3 (ENSMAUG00000012335) #12
SYNTENIC BLOCK FROM Phldb3 (ENSMAUG00000012335) #12 TO Lypd3 (ENSMAUG00000011227) #13
> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 1616

















>> CHROMOSOME 1327
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN Dmrtc2 (ENSNGAG00000006066) #20 AND Cd79a (ENSNGAG00000016621) #24
SYNTENIC BLOCK FROM Cd79a (ENSNGAG00000016621) #23 TO Pou2f2 (ENSNGAG00000021598) #30 [REVERSED]
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 186
SYNTENIC BLOCK FROM ENSJJAG00000023906 #0 TO Smg9 (ENSJJAG00000023462) #1 [REVERSED]
ADJACENCY BETWEEN Smg9 (ENSJJAG00000023462) #1 AND Cadm4 (ENSJJAG00000022693) #4
SYNTENIC BLOCK FROM Cadm4 (ENSJJAG00000022693) #4 TO Zfp428 (ENSJJAG00000022431) #5 [REVERSED]
ADJACENCY BETWEEN Zfp428 (ENSJJAG00000022431) #5 AND Irgq (ENSJJAG00000022079) #7
SYNTENIC BLOCK FROM Irgq (ENSJJAG00000022079) #7 TO Xrcc1 (ENSJJAG00000019927) #9 [REVERSED]
SYNTENIC BLOCK FROM Ethe1 (ENSJJAG00000013800) #11 TO Lypd3 (ENSJJAG00000012768) #13 [REVERSED]
DISTANT LINK BETWEEN Lypd3 (ENSJJAG00000012768) #48 AND Lypd4 (ENSJJAG00000015698) #71
SYNTENIC BLOCK FROM Lypd4 (ENSJJAG00000015698) #20 TO Erfl (ENSJJAG00000003327) #25
ADJACENCY BETWEEN Erfl (ENSJJAG00000003327) #25 AND Atp1a3 (ENSJJAG00000012190) #27
SYNTENIC BLOCK FROM Atp1a3 (ENSJJAG00000012190) #27 TO Pou2f2 (ENSJJAG00000022155) #30