> Murinae [ANCESTRALSPECIES] >> CHROMOSOME 12 DISTANT LINK BETWEEN ENSGT00550000074956 #36 AND ENSGT00950000183152.A #34 DISTANT LINK BETWEEN ENSGT00390000012029 #37 AND ENSGT00940000155345 #35 ADJACENCY BETWEEN ENSGT00940000155345 #4 AND ENSGT00940000153899.b.b #6 SYNTENIC BLOCK FROM ENSGT00940000153899.b.b #6 TO ENSGT00940000156841 #21 ADJACENCY BETWEEN ENSGT00940000156841 #21 AND ENSGT00940000156327 #23 SYNTENIC BLOCK FROM ENSGT00940000156327 #23 TO ENSGT00390000015405 #25 DISTANT LINK BETWEEN ENSGT00390000015405 #58 AND ENSGT00390000018052.s #56 DISTANT LINK BETWEEN ENSGT00950000183091.A.b #59 AND ENSGT00940000156530.c #57 SYNTENIC BLOCK FROM ENSGT00940000156530.c #28 TO ENSGT00940000157885 #30 > Mus [ANCESTRALSPECIES] >> CHROMOSOME 14 DISTANT LINK BETWEEN ENSGT00550000074956 #38 AND ENSGT00950000183152.A #36 DISTANT LINK BETWEEN ENSGT00390000012029 #39 AND ENSGT00940000155345 #37 ADJACENCY BETWEEN ENSGT00940000155345 #4 AND ENSGT00940000153899.b.b #6 SYNTENIC BLOCK FROM ENSGT00940000153899.b.b #6 TO ENSGT00940000156841 #21 ADJACENCY BETWEEN ENSGT00940000156841 #21 AND ENSGT00940000156327 #23 SYNTENIC BLOCK FROM ENSGT00940000156327 #23 TO ENSGT00390000015405 #25 DISTANT LINK BETWEEN ENSGT00390000015405 #60 AND ENSGT00390000018052.s #58 DISTANT LINK BETWEEN ENSGT00950000183091.A.b #61 AND ENSGT00940000156530.c #59 SYNTENIC BLOCK FROM ENSGT00940000156530.c #28 TO ENSGT00940000157885 #30 > Mus_A [ANCESTRALSPECIES] >> CHROMOSOME 2 DISTANT LINK BETWEEN ENSGT00550000074956 #1455 AND ENSGT00950000183152.A #1453 DISTANT LINK BETWEEN ENSGT00390000012029 #1456 AND ENSGT00940000155345 #1454 ADJACENCY BETWEEN ENSGT00940000155345 #4 AND ENSGT00940000153899.b.b #6 SYNTENIC BLOCK FROM ENSGT00940000153899.b.b #6 TO ENSGT00940000156841 #21 ADJACENCY BETWEEN ENSGT00940000156841 #21 AND ENSGT00940000156327 #23 SYNTENIC BLOCK FROM ENSGT00940000156327 #23 TO ENSGT00390000015405 #25 DISTANT LINK BETWEEN ENSGT00390000015405 #1477 AND ENSGT00390000018052.s #1475 DISTANT LINK BETWEEN ENSGT00950000183091.A.b #1478 AND ENSGT00940000156530.c #1476 SYNTENIC BLOCK FROM ENSGT00940000156530.c #28 TO ENSGT00940000157885 #30 > Mus_B [ANCESTRALSPECIES] >> CHROMOSOME 2 [REVERSED] DISTANT LINK BETWEEN ENSGT00550000074956 #130 AND ENSGT00950000183152.A #132 [REVERSED] [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSGT00390000012029 #129 AND ENSGT00940000155345 #131 [REVERSED] ADJACENCY BETWEEN ENSGT00940000155345 #4 AND ENSGT00940000153899.b.b #6 SYNTENIC BLOCK FROM ENSGT00940000153899.b.b #6 TO ENSGT00940000156841 #21 [REVERSED] ADJACENCY BETWEEN ENSGT00940000156841 #21 AND ENSGT00940000156327 #23 SYNTENIC BLOCK FROM ENSGT00940000156327 #23 TO ENSGT00390000015405 #25 [REVERSED] DISTANT LINK BETWEEN ENSGT00390000015405 #108 AND ENSGT00390000018052.s #110 [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSGT00950000183091.A.b #107 AND ENSGT00940000156530.c #109 SYNTENIC BLOCK FROM ENSGT00940000156530.c #28 TO ENSGT00940000157885 #30 [REVERSED] > Mus_C [ANCESTRALSPECIES] >> CHROMOSOME 3 [REVERSED] DISTANT LINK BETWEEN ENSGT00550000074956 #130 AND ENSGT00950000183152.A #132 [REVERSED] [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSGT00390000012029 #129 AND ENSGT00940000155345 #131 [REVERSED] ADJACENCY BETWEEN ENSGT00940000155345 #4 AND ENSGT00940000153899.b.b #6 SYNTENIC BLOCK FROM ENSGT00940000153899.b.b #6 TO ENSGT00940000156841 #21 [REVERSED] ADJACENCY BETWEEN ENSGT00940000156841 #21 AND ENSGT00940000156327 #23 SYNTENIC BLOCK FROM ENSGT00940000156327 #23 TO ENSGT00390000015405 #25 [REVERSED] DISTANT LINK BETWEEN ENSGT00390000015405 #108 AND ENSGT00390000018052.s #110 [REVERSED] [REVERSED] DISTANT LINK BETWEEN ENSGT00950000183091.A.b #107 AND ENSGT00940000156530.c #109 SYNTENIC BLOCK FROM ENSGT00940000156530.c #28 TO ENSGT00940000157885 #30 [REVERSED] > spretus [REFERENCESPECIES] >> CHROMOSOME 2 SYNTENIC BLOCK FROM Cct4 (MGP_SPRETEiJ_G0016977) #0 TO Plek (MGP_SPRETEiJ_G0016947) #30 [REVERSED] > Steppe mouse [MODERNSPECIES] >> CHROMOSOME 2568 DISTANT LINK BETWEEN Ugp2 (ENSMSIG00000014630) #3 AND Vps54 (ENSMSIG00000014517) #5 DISTANT LINK BETWEEN Vps54 (ENSMSIG00000014517) #1 AND Peli1 (ENSMSIG00000014472) #3 SYNTENIC BLOCK FROM Peli1 (ENSMSIG00000014472) #13 TO Lgalsl (ENSMSIG00000014448) #14 >> CHROMOSOME 2972 SYNTENIC BLOCK FROM Etaa1 (ENSMSIG00000000849) #24 TO C1d (ENSMSIG00000000910) #25 [REVERSED] ADJACENCY BETWEEN C1d (ENSMSIG00000000910) #25 AND Dnaaf10 (ENSMSIG00000000934) #27 [REVERSED] DISTANT LINK BETWEEN Dnaaf10 (ENSMSIG00000000934) #5 AND ENSMSIG00000000988 #3 SYNTENIC BLOCK FROM ENSMSIG00000000988 #28 TO Plek (ENSMSIG00000001053) #30 [REVERSED] >> CHROMOSOME 3178 SYNTENIC BLOCK FROM Aftph (ENSMSIG00000013440) #15 TO Sertad2 (ENSMSIG00000013434) #16 [REVERSED] DISTANT LINK BETWEEN Sertad2 (ENSMSIG00000013434) #7 AND Slc1a4 (ENSMSIG00000013384) #9 SYNTENIC BLOCK FROM Slc1a4 (ENSMSIG00000013384) #17 TO Spred2 (ENSMSIG00000013142) #21 [REVERSED] DISTANT LINK BETWEEN Spred2 (ENSMSIG00000013142) #0 AND Meis1 (ENSMSIG00000012755) #3 [REVERSED] >> CHROMOSOME 3019 [REVERSED] DISTANT LINK BETWEEN Cct4 (ENSMSIG00000031863) #6 AND ENSMSIG00000031867 #3 [REVERSED] [REVERSED] [REVERSED] DISTANT LINK BETWEEN Commd1 (ENSMSIG00000031866) #7 AND B3gnt2 (ENSMSIG00000031870) #5 [REVERSED] DISTANT LINK BETWEEN B3gnt2 (ENSMSIG00000031870) #10 AND Tmem17 (ENSMSIG00000031873) #7 SYNTENIC BLOCK FROM Tmem17 (ENSMSIG00000031873) #6 TO Mdh1 (ENSMSIG00000031877) #10 [REVERSED] > Mouse [MODERNSPECIES] >> CHROMOSOME 2 [REVERSED] ADJACENCY BETWEEN Cct4 (ENSMUSG00000007739) #0 AND Commd1 (ENSMUSG00000051355) #2 [REVERSED] [REVERSED] DISTANT LINK BETWEEN Commd1 (ENSMUSG00000051355) #128 AND B3gnt2 (ENSMUSG00000051650) #130 [REVERSED] ADJACENCY BETWEEN B3gnt2 (ENSMUSG00000051650) #4 AND Tmem17 (ENSMUSG00000049904) #6 SYNTENIC BLOCK FROM Tmem17 (ENSMUSG00000049904) #6 TO Spred2 (ENSMUSG00000045671) #21 [REVERSED] ADJACENCY BETWEEN Spred2 (ENSMUSG00000045671) #21 AND Meis1 (ENSMUSG00000020160) #23 SYNTENIC BLOCK FROM Meis1 (ENSMUSG00000020160) #23 TO Plek (ENSMUSG00000020120) #30 [REVERSED] > Ryukyu mouse [MODERNSPECIES] >> CHROMOSOME 2 SYNTENIC BLOCK FROM Cct4 (MGP_CAROLIEiJ_G0016134) #0 TO MGP_CAROLIEiJ_G0016133 #1 [REVERSED] DISTANT LINK BETWEEN MGP_CAROLIEiJ_G0016133 #125 AND MGP_CAROLIEiJ_G0016130 #128 [REVERSED] [REVERSED] DISTANT LINK BETWEEN MGP_CAROLIEiJ_G0016132 #125 AND MGP_CAROLIEiJ_G0016130 #127 [REVERSED] SYNTENIC BLOCK FROM MGP_CAROLIEiJ_G0016132 #3 TO B3gnt2 (MGP_CAROLIEiJ_G0016131) #4 [REVERSED] DISTANT LINK BETWEEN B3gnt2 (MGP_CAROLIEiJ_G0016131) #124 AND MGP_CAROLIEiJ_G0016129 #126 SYNTENIC BLOCK FROM MGP_CAROLIEiJ_G0016129 #5 TO Spred2 (MGP_CAROLIEiJ_G0016113) #21 [REVERSED] ADJACENCY BETWEEN Spred2 (MGP_CAROLIEiJ_G0016113) #21 AND Meis1 (MGP_CAROLIEiJ_G0016112) #23 SYNTENIC BLOCK FROM Meis1 (MGP_CAROLIEiJ_G0016112) #23 TO Plek (MGP_CAROLIEiJ_G0016105) #30 [REVERSED] > Shrew mouse [MODERNSPECIES] >> CHROMOSOME 4 DISTANT LINK BETWEEN Cct4 (MGP_PahariEiJ_G0016756) #38 AND MGP_PahariEiJ_G0016759 #35 DISTANT LINK BETWEEN MGP_PahariEiJ_G0016758 #39 AND B3gnt2 (MGP_PahariEiJ_G0016760) #37 SYNTENIC BLOCK FROM B3gnt2 (MGP_PahariEiJ_G0016760) #4 TO MGP_PahariEiJ_G0016770 #14 SYNTENIC BLOCK FROM Lgalsl (MGP_PahariEiJ_G0016771) #14 TO Spred2 (MGP_PahariEiJ_G0016778) #21 ADJACENCY BETWEEN Spred2 (MGP_PahariEiJ_G0016778) #21 AND Meis1 (MGP_PahariEiJ_G0016779) #23 SYNTENIC BLOCK FROM Meis1 (MGP_PahariEiJ_G0016779) #23 TO C1d (MGP_PahariEiJ_G0016781) #25 DISTANT LINK BETWEEN C1d (MGP_PahariEiJ_G0016781) #62 AND Pno1 (MGP_PahariEiJ_G0016783) #60 DISTANT LINK BETWEEN Dnaaf10 (MGP_PahariEiJ_G0016782) #63 AND Ppp3r1 (MGP_PahariEiJ_G0016784) #61 SYNTENIC BLOCK FROM Ppp3r1 (MGP_PahariEiJ_G0016784) #28 TO Plek (MGP_PahariEiJ_G0016786) #30 > Rat [MODERNSPECIES] >> CHROMOSOME 5 SYNTENIC BLOCK FROM Cct4 (ENSRNOG00000009642) #0 TO Commd1 (ENSRNOG00000009281) #2 [REVERSED] SYNTENIC BLOCK FROM Commd1 (ENSRNOG00000009281) #3 TO B3gnt2 (ENSRNOG00000009267) #4 [REVERSED] DISTANT LINK BETWEEN B3gnt2 (ENSRNOG00000009267) #682 AND Tmem17 (ENSRNOG00000009220) #685 SYNTENIC BLOCK FROM Tmem17 (ENSRNOG00000009220) #6 TO Otx1 (ENSRNOG00000065081) #8 [REVERSED] DISTANT LINK BETWEEN Otx1 (ENSRNOG00000065081) #678 AND Wdpcp (ENSRNOG00000054331) #680 SYNTENIC BLOCK FROM Wdpcp (ENSRNOG00000054331) #9 TO Peli1 (ENSRNOG00000006329) #13 [REVERSED] DISTANT LINK BETWEEN Peli1 (ENSRNOG00000006329) #672 AND Lgalsl (ENSRNOG00000005464) #674 [REVERSED] DISTANT LINK BETWEEN Lgalsl (ENSRNOG00000005464) #670 AND Aftph (ENSRNOG00000005411) #672 SYNTENIC BLOCK FROM Aftph (ENSRNOG00000005411) #15 TO Rab1a (ENSRNOG00000004992) #19 [REVERSED] DISTANT LINK BETWEEN Rab1a (ENSRNOG00000004992) #392 AND ENSRNOG00000065472 #666 [REVERSED] SYNTENIC BLOCK FROM Actr2 (ENSRNOG00000004959) #20 TO Spred2 (ENSRNOG00000004888) #21 [REVERSED] ADJACENCY BETWEEN Spred2 (ENSRNOG00000004888) #21 AND Meis1 (ENSRNOG00000004606) #23 SYNTENIC BLOCK FROM Meis1 (ENSRNOG00000004606) #23 TO Etaa1l1 (ENSRNOG00000006185) #24 [REVERSED] DISTANT LINK BETWEEN Etaa1l1 (ENSRNOG00000006185) #657 AND C1d (ENSRNOG00000005982) #659 SYNTENIC BLOCK FROM C1d (ENSRNOG00000005982) #25 TO Pno1 (ENSRNOG00000005524) #26 [REVERSED] ADJACENCY BETWEEN Pno1 (ENSRNOG00000005524) #26 AND Cnrip1 (ENSRNOG00000005326) #29 SYNTENIC BLOCK FROM Cnrip1 (ENSRNOG00000005326) #29 TO Plek (ENSRNOG00000005214) #30 [REVERSED] >> CHROMOSOME 0 [REVERSED] [REVERSED]