> Fungi/Metazoa group [ANCESTRALSPECIES]
> Bilateria [ANCESTRALSPECIES]
> Chordata [ANCESTRALSPECIES]
> Vertebrata [ANCESTRALSPECIES]
> Gnathostomata [ANCESTRALSPECIES]
> Euteleostomi [ANCESTRALSPECIES]
> Sarcopterygii [ANCESTRALSPECIES]
>> CHROMOSOME 357

DISTANT LINK BETWEEN ENSGT00390000008631.b #2 AND ENSGT00940000157503 #0
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17
> Tetrapoda [ANCESTRALSPECIES]
>> CHROMOSOME 166
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657 #14 [REVERSED]
>> CHROMOSOME 5

DISTANT LINK BETWEEN ENSGT00390000008631.b #257 AND ENSGT00940000157503 #255
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17
> Amniota [ANCESTRALSPECIES]
>> CHROMOSOME 5
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #434 AND ENSGT00940000157503 #432
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17
> Mammalia [ANCESTRALSPECIES]
>> CHROMOSOME 46
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #38 AND ENSGT00940000157503 #40
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17 [REVERSED]
> Theria [ANCESTRALSPECIES]
>> CHROMOSOME 50
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #10 AND ENSGT00940000157503 #12
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Eutheria [ANCESTRALSPECIES]
>> CHROMOSOME 36
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #12 AND ENSGT00940000157503 #14
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Boreoeutheria [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #232 AND ENSGT00940000157503 #234
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Laurasiatheria [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #234 AND ENSGT00940000157503 #236
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Laurasiatheria_a [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #236 AND ENSGT00940000157503 #238
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Laurasiatheria_b [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #536 AND ENSGT00940000157503 #534
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Carnivora [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #229 AND ENSGT00940000157503 #231
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Caniformia [ANCESTRALSPECIES]
>> CHROMOSOME 26
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #236 AND ENSGT00940000157503 #238
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Caniformia_b [ANCESTRALSPECIES]
>> CHROMOSOME 24
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #234 AND ENSGT00940000157503 #236
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Ursidae [ANCESTRALSPECIES]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #234 AND ENSGT00940000157503 #236
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Ursus [ANCESTRALSPECIES]
>> CHROMOSOME 122
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000162057 #18
> American black bear [REFERENCESPECIES]
>> CHROMOSOME 1097
SYNTENIC BLOCK FROM GPKOW (ENSUAMG00000026502) #13 TO KCND1 (ENSUAMG00000026553) #18
> Polar bear [MODERNSPECIES]
>> CHROMOSOME 91
SYNTENIC BLOCK FROM GPKOW (ENSUMAG00000007072) #13 TO ENSUMAG00000007076 #14
ADJACENCY BETWEEN ENSUMAG00000007076 #14 AND TFE3 (ENSUMAG00000007096) #16
SYNTENIC BLOCK FROM TFE3 (ENSUMAG00000007096) #16 TO ENSUMAG00000007168 #17
> Giant Panda [MODERNSPECIES]
>> CHROMOSOME 2288
 [REVERSED]
DISTANT LINK BETWEEN GPKOW (ENSAMEG00000012303) #240 AND WDR45 (ENSAMEG00000012317) #242
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSAMEG00000025959) #238 AND TFE3 (ENSAMEG00000012353) #241
SYNTENIC BLOCK FROM TFE3 (ENSAMEG00000012353) #16 TO KCND1 (ENSAMEG00000012403) #18 [REVERSED]
> Mustelinae [ANCESTRALSPECIES]
>> CHROMOSOME 62
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657 #14 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000155657 #79 AND ENSGT00940000157503 #81
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Ferret [MODERNSPECIES]
>> CHROMOSOME 209
SYNTENIC BLOCK FROM GPKOW (ENSMPUG00000013808) #13 TO WDR45 (ENSMPUG00000013804) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSMPUG00000013804) #94 AND TFE3 (ENSMPUG00000013794) #96
SYNTENIC BLOCK FROM TFE3 (ENSMPUG00000013794) #16 TO KCND1 (ENSMPUG00000013750) #18 [REVERSED]
> American mink [MODERNSPECIES]
>> CHROMOSOME 349
SYNTENIC BLOCK FROM GPKOW (ENSNVIG00000007543) #13 TO WDR45 (ENSNVIG00000007299) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSNVIG00000007299) #25 AND TFE3 (ENSNVIG00000007224) #27
SYNTENIC BLOCK FROM TFE3 (ENSNVIG00000007224) #16 TO KCND1 (ENSNVIG00000006987) #18 [REVERSED]
> Canidae [ANCESTRALSPECIES]
>> CHROMOSOME 26
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #235 AND ENSGT00940000157503 #237
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Red fox [MODERNSPECIES]
>> CHROMOSOME 171
SYNTENIC BLOCK FROM GPKOW (ENSVVUG00000017815) #13 TO PRAF2 (ENSVVUG00000017804) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSVVUG00000017804) #48 AND TFE3 (ENSVVUG00000017798) #50
SYNTENIC BLOCK FROM TFE3 (ENSVVUG00000017798) #16 TO KCND1 (ENSVVUG00000017790) #18 [REVERSED]
> Canis_lupus [ANCESTRALSPECIES]
>> CHROMOSOME 26
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #247 AND ENSGT00940000157503 #249
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Dog [MODERNSPECIES]
>> CHROMOSOME 144
SYNTENIC BLOCK FROM PRAF2 (ENSCAFG00845031037) #14 TO PRAF2 (ENSCAFG00845031034) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSCAFG00845031034) #245 AND TFE3 (ENSCAFG00845031022) #247
SYNTENIC BLOCK FROM TFE3 (ENSCAFG00845031022) #16 TO KCND1 (ENSCAFG00845031009) #18 [REVERSED]
> Dingo [MODERNSPECIES]
>> CHROMOSOME 247
SYNTENIC BLOCK FROM GPKOW (ENSCAFG00020020258) #13 TO PRAF2 (ENSCAFG00020020266) #15
DISTANT LINK BETWEEN PRAF2 (ENSCAFG00020020266) #67 AND TFE3 (ENSCAFG00020020278) #65
SYNTENIC BLOCK FROM TFE3 (ENSCAFG00020020278) #16 TO KCND1 (ENSCAFG00020020294) #18
> Felidae [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #234 AND ENSGT00940000157503 #236
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Panthera [ANCESTRALSPECIES]
>> CHROMOSOME 39
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #20 AND ENSGT00940000157503 #18
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Tiger [MODERNSPECIES]
>> CHROMOSOME 213
SYNTENIC BLOCK FROM GPKOW (ENSPTIG00000008398) #13 TO ENSPTIG00000016518 #18
> Panthera_a [ANCESTRALSPECIES]
>> CHROMOSOME 39
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #20 AND ENSGT00940000157503 #18
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> leopard [MODERNSPECIES]
>> CHROMOSOME 69
SYNTENIC BLOCK FROM GPKOW (ENSPPRG00000016972) #13 TO PRAF2 (ENSPPRG00000022973) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSPPRG00000022973) #82 AND TFE3 (ENSPPRG00000001116) #84
SYNTENIC BLOCK FROM TFE3 (ENSPPRG00000001116) #16 TO KCND1 (ENSPPRG00000003846) #18 [REVERSED]
> lion [MODERNSPECIES]
>> CHROMOSOME 88
 [REVERSED]
DISTANT LINK BETWEEN GPKOW (ENSPLOG00000017787) #497 AND WDR45 (ENSPLOG00000017571) #499
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSPLOG00000017750) #495 AND TFE3 (ENSPLOG00000017261) #498
SYNTENIC BLOCK FROM TFE3 (ENSPLOG00000017261) #16 TO KCND1 (ENSPLOG00000016999) #18 [REVERSED]
> Cat [MODERNSPECIES]
>> CHROMOSOME 252
SYNTENIC BLOCK FROM GPKOW (ENSFCAG00000003818) #13 TO WDR45 (ENSFCAG00000002577) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSFCAG00000002577) #243 AND TFE3 (ENSFCAG00000002574) #245
SYNTENIC BLOCK FROM TFE3 (ENSFCAG00000002574) #16 TO KCND1 (ENSFCAG00000002579) #18 [REVERSED]
> Laurasiatheria_c [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #506 AND ENSGT00940000157503 #504
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Chiroptera [ANCESTRALSPECIES]
>> CHROMOSOME 25
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #207 AND ENSGT00940000157503 #209
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Microchiroptera [ANCESTRALSPECIES]
>> CHROMOSOME 25
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #204 AND ENSGT00940000157503 #206
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Microbat [MODERNSPECIES]
>> CHROMOSOME 1133
SYNTENIC BLOCK FROM ENSMLUG00000030743 #14 TO PRAF2 (ENSMLUG00000029904) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSMLUG00000029904) #39 AND TFE3 (ENSMLUG00000030217) #41
SYNTENIC BLOCK FROM TFE3 (ENSMLUG00000030217) #16 TO KCND1 (ENSMLUG00000009225) #18 [REVERSED]
> Greater horseshoe bat [MODERNSPECIES]
>> CHROMOSOME 0
SYNTENIC BLOCK FROM GPKOW (ENSRFEG00010000184) #13 TO PRAF2 (ENSRFEG00010000329) #15
DISTANT LINK BETWEEN PRAF2 (ENSRFEG00010000329) #642 AND TFE3 (ENSRFEG00010000384) #640
SYNTENIC BLOCK FROM TFE3 (ENSRFEG00010000384) #16 TO KCND1 (ENSRFEG00010000496) #18
> Megabat [MODERNSPECIES]
>> CHROMOSOME 3735
SYNTENIC BLOCK FROM GRIPAP1 (ENSPVAG00000007653) #17 TO KCND1 (ENSPVAG00000007650) #18 [REVERSED]
>> CHROMOSOME 4890
SYNTENIC BLOCK FROM WDR45 (ENSPVAG00000003196) #14 TO PRAF2 (ENSPVAG00000003194) #15 [REVERSED]
> Equus [ANCESTRALSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #85 AND ENSGT00940000157503 #87
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Horse [MODERNSPECIES]
>> CHROMOSOME 480
SYNTENIC BLOCK FROM GPKOW (ENSECAG00000018251) #13 TO PRAF2 (ENSECAG00000046475) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSECAG00000046475) #257 AND TFE3 (ENSECAG00000020642) #259
SYNTENIC BLOCK FROM TFE3 (ENSECAG00000020642) #16 TO KCND1 (ENSECAG00000014802) #18 [REVERSED]
> Donkey [MODERNSPECIES]
>> CHROMOSOME 36
SYNTENIC BLOCK FROM GPKOW (ENSEASG00005019852) #13 TO PRAF2 (ENSEASG00005032624) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSEASG00005032624) #223 AND TFE3 (ENSEASG00005014881) #225
SYNTENIC BLOCK FROM TFE3 (ENSEASG00005014881) #16 TO KCND1 (ENSEASG00005019201) #18 [REVERSED]
> Artiodactyla [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #536 AND ENSGT00940000157503 #534
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Suina [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657 #14
DISTANT LINK BETWEEN ENSGT00940000155657 #491 AND ENSGT00940000157503 #489
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Pig [MODERNSPECIES]
>> CHROMOSOME 300
SYNTENIC BLOCK FROM GPKOW (ENSSSCG00000012291) #13 TO WDR45 (ENSSSCG00000012290) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSSSCG00000012290) #270 AND TFE3 (ENSSSCG00000012287) #272
SYNTENIC BLOCK FROM TFE3 (ENSSSCG00000012287) #16 TO KCND1 (ENSSSCG00000028284) #18 [REVERSED]
> Chacoan peccary [MODERNSPECIES]
>> CHROMOSOME 107
SYNTENIC BLOCK FROM GPKOW (ENSCWAG00000009496) #13 TO WDR45 (ENSCWAG00000009600) #14
DISTANT LINK BETWEEN WDR45 (ENSCWAG00000009600) #22 AND TFE3 (ENSCWAG00000010121) #20
SYNTENIC BLOCK FROM TFE3 (ENSCWAG00000010121) #16 TO KCND1 (ENSCWAG00000010930) #18
> Artiodactyla_a [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #221 AND ENSGT00940000157503 #223
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Camelidae [ANCESTRALSPECIES]
>> CHROMOSOME 45
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #77 AND ENSGT00940000157503 #79
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Arabian camel [MODERNSPECIES]
>> CHROMOSOME 204
SYNTENIC BLOCK FROM GPKOW (ENSCDRG00005018640) #13 TO PRAF2 (ENSCDRG00005018493) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSCDRG00005018493) #229 AND TFE3 (ENSCDRG00005018293) #231
SYNTENIC BLOCK FROM TFE3 (ENSCDRG00005018293) #16 TO KCND1 (ENSCDRG00005017937) #18 [REVERSED]
> Alpaca [MODERNSPECIES]
> Artiodactyla_b [ANCESTRALSPECIES]
>> CHROMOSOME 24
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #71 AND ENSGT00940000157503 #69
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Cetacea [ANCESTRALSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #69 AND ENSGT00940000157503 #67
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Odontoceti [ANCESTRALSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #73 AND ENSGT00940000157503 #71
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Odontoceti_a [ANCESTRALSPECIES]
>> CHROMOSOME 20
SYNTENIC BLOCK FROM ENSGT00390000015154.e #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #222 AND ENSGT00940000157503 #224
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Dolphin [MODERNSPECIES]
>> CHROMOSOME 3164
SYNTENIC BLOCK FROM GRIPAP1 (ENSTTRG00000013654) #17 TO KCND1 (ENSTTRG00000013649) #18 [REVERSED]
>> CHROMOSOME 1357
SYNTENIC BLOCK FROM WDR45 (ENSTTRG00000009131) #14 TO PRAF2 (ENSTTRG00000009121) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSTTRG00000009121) #0 AND TFE3 (ENSTTRG00000009064) #2
 [REVERSED]
> Odontoceti_b [ANCESTRALSPECIES]
>> CHROMOSOME 22
SYNTENIC BLOCK FROM ENSGT00390000015154.e #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #228 AND ENSGT00940000157503 #230
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Vaquita [MODERNSPECIES]
>> CHROMOSOME 34
 [REVERSED]
DISTANT LINK BETWEEN ENSPSNG00000022263 #260 AND WDR45 (ENSPSNG00000022244) #262
SYNTENIC BLOCK FROM WDR45 (ENSPSNG00000022244) #14 TO PRAF2 (ENSPSNG00000022219) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSPSNG00000022219) #257 AND TFE3 (ENSPSNG00000022162) #259
SYNTENIC BLOCK FROM TFE3 (ENSPSNG00000022162) #16 TO KCND1 (ENSPSNG00000022071) #18 [REVERSED]
> Monodontidae [ANCESTRALSPECIES]
>> CHROMOSOME 25
SYNTENIC BLOCK FROM ENSGT00390000015154.e #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #101 AND ENSGT00940000157503 #103
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Narwhal [MODERNSPECIES]
>> CHROMOSOME 309
 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSMMNG00015014008) #241 AND TFE3 (ENSMMNG00015013885) #243
SYNTENIC BLOCK FROM TFE3 (ENSMMNG00015013885) #16 TO KCND1 (ENSMMNG00015013766) #18 [REVERSED]
> Beluga whale [MODERNSPECIES]
>> CHROMOSOME 58
SYNTENIC BLOCK FROM GPKOW (ENSDLEG00000015449) #13 TO PRAF2 (ENSDLEG00000015413) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSDLEG00000015413) #86 AND TFE3 (ENSDLEG00000015379) #88
SYNTENIC BLOCK FROM TFE3 (ENSDLEG00000015379) #16 TO KCND1 (ENSDLEG00000015277) #18 [REVERSED]
> Sperm whale [MODERNSPECIES]
>> CHROMOSOME 13

DISTANT LINK BETWEEN GPKOW (ENSPCTG00005005740) #151 AND WDR45 (ENSPCTG00005005819) #149
SYNTENIC BLOCK FROM WDR45 (ENSPCTG00005005819) #14 TO PRAF2 (ENSPCTG00005005914) #15
DISTANT LINK BETWEEN PRAF2 (ENSPCTG00005005914) #154 AND TFE3 (ENSPCTG00005006092) #152
SYNTENIC BLOCK FROM TFE3 (ENSPCTG00005006092) #16 TO KCND1 (ENSPCTG00005006272) #18
> Blue whale [MODERNSPECIES]
>> CHROMOSOME 40
 [REVERSED]
DISTANT LINK BETWEEN GPKOW (ENSBMSG00010015358) #259 AND WDR45 (ENSBMSG00010015179) #261
 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSBMSG00010015179) #257 AND TFE3 (ENSBMSG00010014969) #259
SYNTENIC BLOCK FROM TFE3 (ENSBMSG00010014969) #16 TO KCND1 (ENSBMSG00010014802) #18 [REVERSED]
> Pecora [ANCESTRALSPECIES]
>> CHROMOSOME 27
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #189 AND ENSGT00940000155657 #191
SYNTENIC BLOCK FROM ENSGT00940000155657 #14 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #186 AND ENSGT00940000157503 #188
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Yarkand deer [MODERNSPECIES]
>> CHROMOSOME 1323

DISTANT LINK BETWEEN GPKOW (ENSCHYG00000008726) #552 AND WDR45 (ENSCHYG00000008790) #550
SYNTENIC BLOCK FROM WDR45 (ENSCHYG00000008790) #14 TO PRAF2 (ENSCHYG00000009137) #15
DISTANT LINK BETWEEN PRAF2 (ENSCHYG00000009137) #555 AND TFE3 (ENSCHYG00000009588) #553
SYNTENIC BLOCK FROM TFE3 (ENSCHYG00000009588) #16 TO KCND1 (ENSCHYG00000010050) #18
> Percora_a [ANCESTRALSPECIES]
>> CHROMOSOME 22
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #186 AND ENSGT00940000155657 #188
SYNTENIC BLOCK FROM ENSGT00940000155657 #14 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #183 AND ENSGT00940000157503 #185
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Siberian musk deer [MODERNSPECIES]
>> CHROMOSOME 140
 [REVERSED]
DISTANT LINK BETWEEN GPKOW (ENSMMSG00000015597) #34 AND WDR45 (ENSMMSG00000015407) #36
SYNTENIC BLOCK FROM WDR45 (ENSMMSG00000015407) #14 TO PRAF2 (ENSMMSG00000015369) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSMMSG00000015369) #31 AND TFE3 (ENSMMSG00000015192) #33
SYNTENIC BLOCK FROM TFE3 (ENSMMSG00000015192) #16 TO KCND1 (ENSMMSG00000014993) #18 [REVERSED]
> Bovidae [ANCESTRALSPECIES]
>> CHROMOSOME 23
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #145 AND ENSGT00940000155657 #147
SYNTENIC BLOCK FROM ENSGT00940000155657 #14 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #142 AND ENSGT00940000157503 #144
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Bovinae [ANCESTRALSPECIES]
>> CHROMOSOME 38
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #145 AND ENSGT00940000155657 #147
SYNTENIC BLOCK FROM ENSGT00940000155657 #14 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #142 AND ENSGT00940000157503 #144
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> American bison [MODERNSPECIES]
>> CHROMOSOME 2566
SYNTENIC BLOCK FROM WDR45 (ENSBBBG00000007866) #14 TO PRAF2 (ENSBBBG00000006683) #15
> Bos [ANCESTRALSPECIES]
>> CHROMOSOME 30
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #221 AND ENSGT00940000155657 #223
SYNTENIC BLOCK FROM ENSGT00940000155657 #14 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #218 AND ENSGT00940000157503 #220
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Bos_b [ANCESTRALSPECIES]
>> CHROMOSOME 12
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #460 AND ENSGT00940000155657 #462
SYNTENIC BLOCK FROM ENSGT00940000155657 #14 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #457 AND ENSGT00940000157503 #459
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Hybrid Bos Indicus [MODERNSPECIES]
>> CHROMOSOME 315

DISTANT LINK BETWEEN GPKOW (ENSBIXG00005007520) #349 AND WDR45 (ENSBIXG00005010398) #347

DISTANT LINK BETWEEN WDR45 (ENSBIXG00005010398) #351 AND TFE3 (ENSBIXG00005010183) #349
SYNTENIC BLOCK FROM TFE3 (ENSBIXG00005010183) #16 TO KCND1 (ENSBIXG00005009897) #18
> Cow [MODERNSPECIES]
>> CHROMOSOME 177
 [REVERSED]
DISTANT LINK BETWEEN GPKOW (ENSBTAG00000002568) #557 AND WDR45 (ENSBTAG00000002563) #559
SYNTENIC BLOCK FROM WDR45 (ENSBTAG00000002563) #14 TO PRAF2 (ENSBTAG00000002562) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSBTAG00000002562) #554 AND TFE3 (ENSBTAG00000008523) #556
SYNTENIC BLOCK FROM TFE3 (ENSBTAG00000008523) #16 TO KCND1 (ENSBTAG00000009024) #18 [REVERSED]
> Bos_a [ANCESTRALSPECIES]
>> CHROMOSOME 26

DISTANT LINK BETWEEN ENSGT00390000015154 #214 AND ENSGT00940000155657 #212
SYNTENIC BLOCK FROM ENSGT00940000155657 #14 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #217 AND ENSGT00940000157503 #215
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Wild yak [MODERNSPECIES]
>> CHROMOSOME 100

DISTANT LINK BETWEEN GPKOW (ENSBMUG00000004443) #16 AND WDR45 (ENSBMUG00000004596) #14

DISTANT LINK BETWEEN WDR45 (ENSBMUG00000004596) #18 AND TFE3 (ENSBMUG00000004711) #16
SYNTENIC BLOCK FROM TFE3 (ENSBMUG00000004711) #16 TO KCND1 (ENSBMUG00000004963) #18
> Domestic yak [MODERNSPECIES]
>> CHROMOSOME 69
 [REVERSED]
DISTANT LINK BETWEEN GPKOW (ENSBGRG00000020742) #536 AND WDR45 (ENSBGRG00000020477) #538
SYNTENIC BLOCK FROM WDR45 (ENSBGRG00000020477) #14 TO PRAF2 (ENSBGRG00000020422) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSBGRG00000020422) #533 AND TFE3 (ENSBGRG00000019914) #535
SYNTENIC BLOCK FROM TFE3 (ENSBGRG00000019914) #16 TO KCND1 (ENSBGRG00000018827) #18 [REVERSED]
> Caprinae [ANCESTRALSPECIES]
>> CHROMOSOME 40
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #53 AND ENSGT00940000155657 #55
SYNTENIC BLOCK FROM ENSGT00940000155657 #14 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #50 AND ENSGT00940000157503 #52
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Goat [MODERNSPECIES]
>> CHROMOSOME 89

DISTANT LINK BETWEEN GPKOW (ENSCHIG00000013277) #2 AND WDR45 (ENSCHIG00000014300) #0
SYNTENIC BLOCK FROM WDR45 (ENSCHIG00000014300) #14 TO PRAF2 (ENSCHIG00000024416) #15
DISTANT LINK BETWEEN PRAF2 (ENSCHIG00000024416) #5 AND TFE3 (ENSCHIG00000025202) #3
SYNTENIC BLOCK FROM TFE3 (ENSCHIG00000025202) #16 TO GRIPAP1 (ENSCHIG00000026013) #17
> Rambouillet Sheep [MODERNSPECIES]
>> CHROMOSOME 205

DISTANT LINK BETWEEN GPKOW (ENSOARG00020016283) #286 AND WDR45 (ENSOARG00020016450) #284
SYNTENIC BLOCK FROM WDR45 (ENSOARG00020016450) #14 TO PRAF2 (ENSOARG00020016835) #15
DISTANT LINK BETWEEN PRAF2 (ENSOARG00020016835) #289 AND TFE3 (ENSOARG00020017512) #287
SYNTENIC BLOCK FROM TFE3 (ENSOARG00020017512) #16 TO KCND1 (ENSOARG00020018421) #18
> Eulipotyphla [ANCESTRALSPECIES]
> Common shrew [MODERNSPECIES]
> Hedgehog [MODERNSPECIES]
> Euarchontoglires [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #528 AND ENSGT00940000157503 #526
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Primates [ANCESTRALSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #230 AND ENSGT00940000157503 #232
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Haplorrhini [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #216 AND ENSGT00940000157503 #218
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Simiiformes [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #528 AND ENSGT00940000157503 #526
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Catarrhini [ANCESTRALSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #260 AND ENSGT00940000157503 #262
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Cercopithecidae [ANCESTRALSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #33 AND ENSGT00940000157503 #31
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Cercopithecinae [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #557 AND ENSGT00940000157503 #555
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Cercopithecinae_a [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #260 AND ENSGT00940000157503 #262
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Cercopithecinae_b [ANCESTRALSPECIES]
>> CHROMOSOME 44
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #30 AND ENSGT00940000157503 #28
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Olive baboon [MODERNSPECIES]
>> CHROMOSOME 792
SYNTENIC BLOCK FROM GPKOW (ENSPANG00000013477) #13 TO PRAF2 (ENSPANG00000040259) #15
DISTANT LINK BETWEEN PRAF2 (ENSPANG00000040259) #654 AND TFE3 (ENSPANG00000013676) #652
SYNTENIC BLOCK FROM TFE3 (ENSPANG00000013676) #16 TO KCND1 (ENSPANG00000003598) #18
> Cercopithecinae_d [ANCESTRALSPECIES]
>> CHROMOSOME 76
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657.db.a.a #14
DISTANT LINK BETWEEN ENSGT00940000155657.db.a.a #26 AND ENSGT00940000157503 #24
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Drill [MODERNSPECIES]
>> CHROMOSOME 1065
SYNTENIC BLOCK FROM GPKOW (ENSMLEG00000033293) #13 TO WDR45 (ENSMLEG00000042347) #14
DISTANT LINK BETWEEN WDR45 (ENSMLEG00000042347) #23 AND TFE3 (ENSMLEG00000037046) #20
SYNTENIC BLOCK FROM TFE3 (ENSMLEG00000037046) #16 TO KCND1 (ENSMLEG00000043942) #18
> Sooty mangabey [MODERNSPECIES]
>> CHROMOSOME 404
SYNTENIC BLOCK FROM GPKOW (ENSCATG00000041433) #13 TO WDR45 (ENSCATG00000006794) #14
DISTANT LINK BETWEEN WDR45 (ENSCATG00000006794) #13 AND TFE3 (ENSCATG00000029548) #11
SYNTENIC BLOCK FROM TFE3 (ENSCATG00000029548) #16 TO KCND1 (ENSCATG00000011996) #18
> Macaca [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #610 AND ENSGT00940000157503 #608
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Pig-tailed macaque [MODERNSPECIES]
>> CHROMOSOME 207
SYNTENIC BLOCK FROM GPKOW (ENSMNEG00000004803) #13 TO WDR45 (ENSMNEG00000034464) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSMNEG00000034464) #31 AND TFE3 (ENSMNEG00000034885) #33
SYNTENIC BLOCK FROM TFE3 (ENSMNEG00000034885) #16 TO KCND1 (ENSMNEG00000044552) #18 [REVERSED]
> Macaca_a [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #548 AND ENSGT00940000157503 #546
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Crab-eating macaque [MODERNSPECIES]
>> CHROMOSOME 175
SYNTENIC BLOCK FROM GPKOW (ENSMFAG00000035346) #13 TO TFE3 (ENSMFAG00000000673) #16 [REVERSED]
DISTANT LINK BETWEEN TFE3 (ENSMFAG00000000673) #300 AND GRIPAP1 (ENSMFAG00000002305) #302
SYNTENIC BLOCK FROM GRIPAP1 (ENSMFAG00000002305) #17 TO ENSMFAG00000032065 #18 [REVERSED]
> Rhesus [MODERNSPECIES]
>> CHROMOSOME 327
 [REVERSED]
DISTANT LINK BETWEEN GPKOW (ENSMMUG00000020557) #275 AND WDR45 (ENSMMUG00000010620) #277
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSMMUG00000055688) #273 AND TFE3 (ENSMMUG00000023494) #276
SYNTENIC BLOCK FROM TFE3 (ENSMMUG00000023494) #16 TO KCND1 (ENSMMUG00000004559) #18 [REVERSED]
> Vervet Monkey [MODERNSPECIES]
>> CHROMOSOME 203
SYNTENIC BLOCK FROM GPKOW (ENSCSAG00000012926) #13 TO PRAF2 (ENSCSAG00000012978) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSCSAG00000012978) #209 AND TFE3 (ENSCSAG00000013021) #211
SYNTENIC BLOCK FROM TFE3 (ENSCSAG00000013021) #16 TO KCND1 (ENSCSAG00000013138) #18 [REVERSED]
> Rhinopithecus [ANCESTRALSPECIES]
>> CHROMOSOME 250
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #7 AND ENSGT00940000157503 #9
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Black snub-nosed monkey [MODERNSPECIES]
>> CHROMOSOME 908
SYNTENIC BLOCK FROM WDR45 (ENSRBIG00000036165) #14 TO PRAF2 (ENSRBIG00000034849) #15
DISTANT LINK BETWEEN PRAF2 (ENSRBIG00000034849) #3 AND TFE3 (ENSRBIG00000036898) #1
SYNTENIC BLOCK FROM TFE3 (ENSRBIG00000036898) #16 TO KCND1 (ENSRBIG00000034428) #18
> Golden snub-nosed monkey [MODERNSPECIES]
>> CHROMOSOME 1030
SYNTENIC BLOCK FROM GPKOW (ENSRROG00000037604) #13 TO WDR45 (ENSRROG00000033808) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSRROG00000033808) #7 AND TFE3 (ENSRROG00000031147) #9
SYNTENIC BLOCK FROM TFE3 (ENSRROG00000031147) #16 TO KCND1 (ENSRROG00000044167) #18 [REVERSED]
> Hominoidea [ANCESTRALSPECIES]
>> CHROMOSOME 16
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #421 AND ENSGT00940000157503 #419
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Hominidae [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #257 AND ENSGT00940000157503 #259
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Orangutan [MODERNSPECIES]
>> CHROMOSOME 242
SYNTENIC BLOCK FROM GPKOW (ENSPPYG00000020334) #13 TO PRAF2 (ENSPPYG00000020332) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSPPYG00000020332) #224 AND TFE3 (ENSPPYG00000029376) #226
SYNTENIC BLOCK FROM TFE3 (ENSPPYG00000029376) #16 TO KCND1 (ENSPPYG00000020328) #18 [REVERSED]
> Homo/Pan/Gorilla group [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #263 AND ENSGT00940000157503 #265
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Gorilla [MODERNSPECIES]
>> CHROMOSOME 523
SYNTENIC BLOCK FROM GPKOW (ENSGGOG00000013685) #13 TO WDR45 (ENSGGOG00000000589) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSGGOG00000000589) #268 AND TFE3 (ENSGGOG00000014023) #270
SYNTENIC BLOCK FROM TFE3 (ENSGGOG00000014023) #16 TO ENSGGOG00000002727 #18 [REVERSED]
> Homo/Pan group [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #608 AND ENSGT00940000157503 #606
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Pan [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657.db.a.a #14 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000155657.db.a.a #273 AND ENSGT00940000157503 #275
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Chimpanzee [MODERNSPECIES]
>> CHROMOSOME 972
SYNTENIC BLOCK FROM GPKOW (ENSPTRG00000047603) #13 TO WDR45 (ENSPTRG00000021882) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSPTRG00000021882) #270 AND TFE3 (ENSPTRG00000021879) #272
SYNTENIC BLOCK FROM TFE3 (ENSPTRG00000021879) #16 TO KCND1 (ENSPTRG00000021877) #18 [REVERSED]
> Bonobo [MODERNSPECIES]
>> CHROMOSOME 369
SYNTENIC BLOCK FROM GPKOW (ENSPPAG00000040116) #13 TO WDR45 (ENSPPAG00000042027) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSPPAG00000042027) #269 AND TFE3 (ENSPPAG00000028832) #271
SYNTENIC BLOCK FROM TFE3 (ENSPPAG00000028832) #16 TO KCND1 (ENSPPAG00000035010) #18 [REVERSED]
> Human [MODERNSPECIES]
>> CHROMOSOME 1827
SYNTENIC BLOCK FROM GPKOW (ENSG00000068394) #13 TO WDR45 (ENSG00000196998) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSG00000196998) #238 AND PRAF2 (ENSG00000243279) #240
 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSG00000243279) #236 AND TFE3 (ENSG00000068323) #238
SYNTENIC BLOCK FROM TFE3 (ENSG00000068323) #16 TO KCND1 (ENSG00000102057) #18 [REVERSED]
> Gibbon [MODERNSPECIES]
>> CHROMOSOME 449
SYNTENIC BLOCK FROM GPKOW (ENSNLEG00000007998) #13 TO ENSNLEG00000007994 #14
DISTANT LINK BETWEEN ENSNLEG00000007994 #200 AND TFE3 (ENSNLEG00000007963) #198
SYNTENIC BLOCK FROM TFE3 (ENSNLEG00000007963) #16 TO KCND1 (ENSNLEG00000007958) #18
> Platyrrhini [ANCESTRALSPECIES]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM ENSGT00390000015154.g #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #222 AND ENSGT00940000157503 #224
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Cebidae [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00390000015154.g #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #219 AND ENSGT00940000157503 #221
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Marmoset [MODERNSPECIES]
>> CHROMOSOME 78
SYNTENIC BLOCK FROM GPKOW (ENSCJAG00000002656) #13 TO PRAF2 (ENSCJAG00000078035) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSCJAG00000078035) #258 AND GRIPAP1 (ENSCJAG00000002531) #261
SYNTENIC BLOCK FROM GRIPAP1 (ENSCJAG00000002531) #17 TO KCND1 (ENSCJAG00000002523) #18 [REVERSED]
> Cebidae_a [ANCESTRALSPECIES]
>> CHROMOSOME 64
SYNTENIC BLOCK FROM ENSGT00390000015154.g #13 TO ENSGT00940000155657 #14 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000155657 #58 AND ENSGT00940000157503 #60
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Bolivian squirrel monkey [MODERNSPECIES]
>> CHROMOSOME 157
SYNTENIC BLOCK FROM ENSSBOG00000032042 #13 TO WDR45 (ENSSBOG00000020972) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSSBOG00000020972) #63 AND TFE3 (ENSSBOG00000035668) #65
SYNTENIC BLOCK FROM TFE3 (ENSSBOG00000035668) #16 TO KCND1 (ENSSBOG00000026039) #18 [REVERSED]
> Capuchin [MODERNSPECIES]
>> CHROMOSOME 30
SYNTENIC BLOCK FROM GRIPAP1 (ENSCCAG00000003776) #17 TO KCND1 (ENSCCAG00000037150) #18 [REVERSED]
>> CHROMOSOME 909
 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSCCAG00000026589) #0 AND TFE3 (ENSCCAG00000025855) #2
 [REVERSED]
> Mas night monkey [MODERNSPECIES]
>> CHROMOSOME 1206
SYNTENIC BLOCK FROM ENSANAG00000030473 #13 TO WDR45 (ENSANAG00000036620) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSANAG00000036620) #20 AND TFE3 (ENSANAG00000037525) #22
SYNTENIC BLOCK FROM TFE3 (ENSANAG00000037525) #16 TO KCND1 (ENSANAG00000027103) #18 [REVERSED]
> Tarsier [MODERNSPECIES]
>> CHROMOSOME 5874
SYNTENIC BLOCK FROM TFE3 (ENSTSYG00000010219) #16 TO KCND1 (ENSTSYG00000028641) #18
> Strepsirrhini [ANCESTRALSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #205 AND ENSGT00940000157503 #207
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Bushbaby [MODERNSPECIES]
>> CHROMOSOME 268
SYNTENIC BLOCK FROM GPKOW (ENSOGAG00000003644) #13 TO PRAF2 (ENSOGAG00000012183) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSOGAG00000012183) #52 AND TFE3 (ENSOGAG00000031330) #54
SYNTENIC BLOCK FROM TFE3 (ENSOGAG00000031330) #16 TO KCND1 (ENSOGAG00000026877) #18 [REVERSED]
> Lemuriformes [ANCESTRALSPECIES]
>> CHROMOSOME 46
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657 #14 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000155657 #76 AND ENSGT00940000157503 #78
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Mouse lemur [MODERNSPECIES]
>> CHROMOSOME 169
 [REVERSED]
DISTANT LINK BETWEEN GPKOW (ENSMICG00000045083) #738 AND WDR45 (ENSMICG00000030259) #740
 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSMICG00000030259) #736 AND TFE3 (ENSMICG00000009708) #738
SYNTENIC BLOCK FROM TFE3 (ENSMICG00000009708) #16 TO KCND1 (ENSMICG00000033913) #18 [REVERSED]
> Lemuriformes_a [ANCESTRALSPECIES]
>> CHROMOSOME 85
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657 #14 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000155657 #46 AND ENSGT00940000157503 #48
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Coquerels sifaka [MODERNSPECIES]
>> CHROMOSOME 532
 [REVERSED]
DISTANT LINK BETWEEN GPKOW (ENSPCOG00000008505) #49 AND WDR45 (ENSPCOG00000022106) #51
 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSPCOG00000022106) #47 AND TFE3 (ENSPCOG00000027417) #49
SYNTENIC BLOCK FROM TFE3 (ENSPCOG00000027417) #16 TO KCND1 (ENSPCOG00000020985) #18 [REVERSED]
> Greater bamboo lemur [MODERNSPECIES]
>> CHROMOSOME 1126

DISTANT LINK BETWEEN WDR45 (ENSPSMG00000016506) #2 AND TFE3 (ENSPSMG00000016555) #0

DISTANT LINK BETWEEN TFE3 (ENSPSMG00000016555) #4 AND GRIPAP1 (ENSPSMG00000016820) #2
SYNTENIC BLOCK FROM GRIPAP1 (ENSPSMG00000016820) #17 TO ENSPSMG00000016867 #18
> Euarchontoglires_A [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #221 AND ENSGT00940000157503 #223
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Tree shrew [MODERNSPECIES]
> Glires [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #222 AND ENSGT00940000157503 #224
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Lagomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 43
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #78 AND ENSGT00940000157503 #80
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Pika [MODERNSPECIES]
>> CHROMOSOME 5358
SYNTENIC BLOCK FROM GRIPAP1 (ENSOPRG00000012728) #17 TO KCND1 (ENSOPRG00000012713) #18 [REVERSED]
> Rabbit [MODERNSPECIES]
>> CHROMOSOME 1401
SYNTENIC BLOCK FROM GPKOW (ENSOCUG00000010422) #13 TO PRAF2 (ENSOCUG00000035406) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSOCUG00000035406) #202 AND TFE3 (ENSOCUG00000015807) #204
SYNTENIC BLOCK FROM TFE3 (ENSOCUG00000015807) #16 TO KCND1 (ENSOCUG00000015777) #18 [REVERSED]
> Rodentia [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #220 AND ENSGT00940000157503 #222
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Rodentia_A [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #215 AND ENSGT00940000157503 #217
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Hystricomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 11
SYNTENIC BLOCK FROM ENSGT00390000015154.k #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #168 AND ENSGT00940000157503 #170
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Hystricomorpha_a [ANCESTRALSPECIES]
>> CHROMOSOME 56
SYNTENIC BLOCK FROM ENSGT00390000015154.k #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #20 AND ENSGT00940000157503 #18
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Guinea pig [MODERNSPECIES]
>> CHROMOSOME 132
SYNTENIC BLOCK FROM GPKOW (ENSCPOG00000013270) #13 TO PRAF2 (ENSCPOG00000030120) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSCPOG00000030120) #43 AND TFE3 (ENSCPOG00000012410) #45
SYNTENIC BLOCK FROM TFE3 (ENSCPOG00000012410) #16 TO KCND1 (ENSCPOG00000013271) #18 [REVERSED]
> Hystricomorpha_b [ANCESTRALSPECIES]
>> CHROMOSOME 81
SYNTENIC BLOCK FROM ENSGT00390000015154.k #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #18 AND ENSGT00940000157503 #16
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Degu [MODERNSPECIES]
>> CHROMOSOME 96
SYNTENIC BLOCK FROM GRIPAP1 (ENSODEG00000009943) #17 TO KCND1 (ENSODEG00000010342) #18 [REVERSED]
>> CHROMOSOME 304
SYNTENIC BLOCK FROM WDR45 (ENSODEG00000001091) #14 TO PRAF2 (ENSODEG00000001165) #15
> Long-tailed chinchilla [MODERNSPECIES]
>> CHROMOSOME 250
SYNTENIC BLOCK FROM ENSCLAG00000002220 #13 TO PRAF2 (ENSCLAG00000004889) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSCLAG00000004889) #22 AND TFE3 (ENSCLAG00000002396) #24
 [REVERSED]
DISTANT LINK BETWEEN TFE3 (ENSCLAG00000002396) #20 AND GRIPAP1 (ENSCLAG00000002364) #22
SYNTENIC BLOCK FROM GRIPAP1 (ENSCLAG00000002364) #17 TO KCND1 (ENSCLAG00000002203) #18 [REVERSED]
> Naked mole-rat female [MODERNSPECIES]
>> CHROMOSOME 31


SYNTENIC BLOCK FROM ENSHGLG00000001929 #14 TO PRAF2 (ENSHGLG00000001998) #15
DISTANT LINK BETWEEN PRAF2 (ENSHGLG00000001998) #672 AND TFE3 (ENSHGLG00000001383) #670
SYNTENIC BLOCK FROM TFE3 (ENSHGLG00000001383) #16 TO KCND1 (ENSHGLG00000001895) #18
>> CHROMOSOME 13

 [REVERSED]
> Sciuridae [ANCESTRALSPECIES]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #183 AND ENSGT00940000157503 #185
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Eurasian red squirrel [MODERNSPECIES]
>> CHROMOSOME 156
SYNTENIC BLOCK FROM GPKOW (ENSSVLG00005019537) #13 TO PRAF2 (ENSSVLG00005019896) #15
DISTANT LINK BETWEEN PRAF2 (ENSSVLG00005019896) #666 AND TFE3 (ENSSVLG00005020065) #664
SYNTENIC BLOCK FROM TFE3 (ENSSVLG00005020065) #16 TO KCND1 (ENSSVLG00005020301) #18
> Marmotini [ANCESTRALSPECIES]
>> CHROMOSOME 81
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #25 AND ENSGT00940000157503 #27
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Alpin marmot [MODERNSPECIES]
>> CHROMOSOME 120
SYNTENIC BLOCK FROM GPKOW (ENSMMMG00000011535) #13 TO KCND1 (ENSMMMG00000012055) #18
> Marmotini_b [ANCESTRALSPECIES]
>> CHROMOSOME 120
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #25 AND ENSGT00940000157503 #27
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Squirrel [MODERNSPECIES]
>> CHROMOSOME 321
 [REVERSED]
DISTANT LINK BETWEEN GPKOW (ENSSTOG00000014593) #29 AND WDR45 (ENSSTOG00000009683) #31
SYNTENIC BLOCK FROM WDR45 (ENSSTOG00000009683) #14 TO PRAF2 (ENSSTOG00000009679) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSSTOG00000009679) #26 AND TFE3 (ENSSTOG00000014237) #28
SYNTENIC BLOCK FROM TFE3 (ENSSTOG00000014237) #16 TO KCND1 (ENSSTOG00000019883) #18 [REVERSED]
> Arctic ground squirrel [MODERNSPECIES]
>> CHROMOSOME 341
 [REVERSED]
DISTANT LINK BETWEEN GPKOW (ENSUPAG00010003718) #27 AND WDR45 (ENSUPAG00010003384) #29
SYNTENIC BLOCK FROM WDR45 (ENSUPAG00010003384) #14 TO PRAF2 (ENSUPAG00010003375) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSUPAG00010003375) #24 AND ENSUPAG00010003193 #26
SYNTENIC BLOCK FROM ENSUPAG00010003193 #16 TO KCND1 (ENSUPAG00010003047) #18 [REVERSED]
> Rodentia_B [ANCESTRALSPECIES]
>> CHROMOSOME 31
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #20 AND ENSGT00940000157503 #18
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Myomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #484 AND ENSGT00940000157503 #482
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Muroidea [ANCESTRALSPECIES]
>> CHROMOSOME 30
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #177 AND ENSGT00940000157503 #179
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Upper Galilee mountains blind mole rat [MODERNSPECIES]
>> CHROMOSOME 1197
SYNTENIC BLOCK FROM Gpkow (ENSNGAG00000005382) #13 TO Praf2 (ENSNGAG00000008257) #15 [REVERSED]
DISTANT LINK BETWEEN Praf2 (ENSNGAG00000008257) #34 AND Tfe3 (ENSNGAG00000011920) #36
SYNTENIC BLOCK FROM Tfe3 (ENSNGAG00000011920) #16 TO Kcnd1 (ENSNGAG00000013998) #18 [REVERSED]
> Muroidea_A [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #629 AND ENSGT00940000157503 #627
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Murinae [ANCESTRALSPECIES]
>> CHROMOSOME 33
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #21 AND ENSGT00940000157503 #19
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Rat [MODERNSPECIES]
>> CHROMOSOME 46
SYNTENIC BLOCK FROM Gpkow (ENSRNOG00000022939) #13 TO Praf2 (ENSRNOG00000057147) #15 [REVERSED]
DISTANT LINK BETWEEN Praf2 (ENSRNOG00000057147) #97 AND Tfe3 (ENSRNOG00000009605) #99
SYNTENIC BLOCK FROM Tfe3 (ENSRNOG00000009605) #16 TO Kcnd1 (ENSRNOG00000039544) #18 [REVERSED]
> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 9
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #692 AND ENSGT00940000157503 #694
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM Gpkow (MGP_PahariEiJ_G0031441) #13 TO Praf2 (MGP_PahariEiJ_G0031443) #15
DISTANT LINK BETWEEN Praf2 (MGP_PahariEiJ_G0031443) #21 AND Tfe3 (MGP_PahariEiJ_G0031445) #19
SYNTENIC BLOCK FROM Tfe3 (MGP_PahariEiJ_G0031445) #16 TO Kcnd1 (MGP_PahariEiJ_G0031447) #18
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 15
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #21 AND ENSGT00940000157503 #19
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM Gpkow (MGP_CAROLIEiJ_G0032893) #13 TO Praf2 (MGP_CAROLIEiJ_G0032895) #15
DISTANT LINK BETWEEN Praf2 (MGP_CAROLIEiJ_G0032895) #22 AND Tfe3 (MGP_CAROLIEiJ_G0032897) #20
SYNTENIC BLOCK FROM Tfe3 (MGP_CAROLIEiJ_G0032897) #16 TO Kcnd1 (MGP_CAROLIEiJ_G0032899) #18
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #706 AND ENSGT00940000157503 #708
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #300 AND ENSGT00940000157503 #302
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> spretus [MODERNSPECIES]
>> CHROMOSOME 19
SYNTENIC BLOCK FROM MGP_SPRETEiJ_G0034041 #13 TO Praf2 (MGP_SPRETEiJ_G0034043) #15
DISTANT LINK BETWEEN Praf2 (MGP_SPRETEiJ_G0034043) #23 AND Tfe3 (MGP_SPRETEiJ_G0034045) #21
SYNTENIC BLOCK FROM Tfe3 (MGP_SPRETEiJ_G0034045) #16 TO Kcnd1 (MGP_SPRETEiJ_G0034047) #18
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 1404
SYNTENIC BLOCK FROM ENSMSIG00000007990 #14 TO ENSMSIG00000008065 #15
> Mouse [MODERNSPECIES]
>> CHROMOSOME 37
SYNTENIC BLOCK FROM Gpkow (ENSMUSG00000031148) #13 TO Wdr45 (ENSMUSG00000039382) #14
DISTANT LINK BETWEEN Wdr45 (ENSMUSG00000039382) #35 AND Praf2 (ENSMUSG00000031149) #33

DISTANT LINK BETWEEN Praf2 (ENSMUSG00000031149) #37 AND Tfe3 (ENSMUSG00000000134) #35
SYNTENIC BLOCK FROM Tfe3 (ENSMUSG00000000134) #16 TO Kcnd1 (ENSMUSG00000009731) #18
> Cricetidae [ANCESTRALSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #81 AND ENSGT00940000157503 #83
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Cricetidae_B [ANCESTRALSPECIES]
>> CHROMOSOME 45
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #20 AND ENSGT00940000157503 #18
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Northern American deer mouse [MODERNSPECIES]
>> CHROMOSOME 475
SYNTENIC BLOCK FROM Gpkow (ENSPEMG00000009966) #13 TO Praf2 (ENSPEMG00000029377) #15
DISTANT LINK BETWEEN Praf2 (ENSPEMG00000029377) #820 AND Tfe3 (ENSPEMG00000013183) #818
SYNTENIC BLOCK FROM Tfe3 (ENSPEMG00000013183) #16 TO Kcnd1 (ENSPEMG00000003794) #18
> Prairie vole [MODERNSPECIES]
>> CHROMOSOME 1

DISTANT LINK BETWEEN Gpkow (ENSMOCG00000019251) #133 AND Wdr45 (ENSMOCG00000014028) #131

DISTANT LINK BETWEEN Wdr45 (ENSMOCG00000014028) #135 AND Tfe3 (ENSMOCG00000013907) #133
SYNTENIC BLOCK FROM Tfe3 (ENSMOCG00000013907) #16 TO Kcnd1 (ENSMOCG00000002342) #18
> Cricetinae [ANCESTRALSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #269 AND ENSGT00940000157503 #267
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Chinese hamster chok1gshd [MODERNSPECIES]
>> CHROMOSOME 175
SYNTENIC BLOCK FROM Gpkow (ENSCGRG00001016210) #13 TO Praf2 (ENSCGRG00001017176) #15
DISTANT LINK BETWEEN Praf2 (ENSCGRG00001017176) #116 AND Tfe3 (ENSCGRG00001000716) #114
SYNTENIC BLOCK FROM Tfe3 (ENSCGRG00001000716) #16 TO Kcnd1 (ENSCGRG00001004134) #18
> Golden Hamster [MODERNSPECIES]
>> CHROMOSOME 799

DISTANT LINK BETWEEN Wdr45 (ENSMAUG00000011036) #19 AND Tfe3 (ENSMAUG00000002865) #17
SYNTENIC BLOCK FROM Tfe3 (ENSMAUG00000002865) #16 TO Kcnd1 (ENSMAUG00000008332) #18
> Lesser Egyptian jerboa [MODERNSPECIES]
>> CHROMOSOME 182
SYNTENIC BLOCK FROM Gpkow (ENSJJAG00000013397) #13 TO Praf2 (ENSJJAG00000020655) #15
DISTANT LINK BETWEEN Praf2 (ENSJJAG00000020655) #41 AND ENSJJAG00000017110 #39
SYNTENIC BLOCK FROM ENSJJAG00000017110 #16 TO Kcnd1 (ENSJJAG00000011860) #18
> Kangaroo rat [MODERNSPECIES]
>> CHROMOSOME 473
SYNTENIC BLOCK FROM Gpkow (ENSDORG00000013663) #13 TO Praf2 (ENSDORG00000024385) #15 [REVERSED]
DISTANT LINK BETWEEN Praf2 (ENSDORG00000024385) #18 AND Tfe3 (ENSDORG00000026289) #20
SYNTENIC BLOCK FROM Tfe3 (ENSDORG00000026289) #16 TO Kcnd1 (ENSDORG00000002661) #18 [REVERSED]
> Atlantogenata [ANCESTRALSPECIES]
>> CHROMOSOME 59
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #70 AND ENSGT00940000157503 #72
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Afrotheria [ANCESTRALSPECIES]
>> CHROMOSOME 72
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #65 AND ENSGT00940000157503 #67
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Afrotheria_a [ANCESTRALSPECIES]
>> CHROMOSOME 69
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #65 AND ENSGT00940000157503 #67
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Elephant [MODERNSPECIES]
>> CHROMOSOME 453
SYNTENIC BLOCK FROM GPKOW (ENSLAFG00000005896) #13 TO PRAF2 (ENSLAFG00000010856) #15
DISTANT LINK BETWEEN PRAF2 (ENSLAFG00000010856) #17 AND TFE3 (ENSLAFG00000025585) #15
SYNTENIC BLOCK FROM TFE3 (ENSLAFG00000025585) #16 TO KCND1 (ENSLAFG00000010111) #18
> Hyrax [MODERNSPECIES]
>> CHROMOSOME 3531
SYNTENIC BLOCK FROM WDR45 (ENSPCAG00000002394) #14 TO PRAF2 (ENSPCAG00000002370) #15 [REVERSED]
>> CHROMOSOME 1992
SYNTENIC BLOCK FROM GRIPAP1 (ENSPCAG00000007774) #17 TO KCND1 (ENSPCAG00000007740) #18 [REVERSED]
> Tenrec [MODERNSPECIES]
> Xenarthra [ANCESTRALSPECIES]
>> CHROMOSOME 63
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #11 AND ENSGT00940000157503 #13
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18 [REVERSED]
> Armadillo [MODERNSPECIES]
>> CHROMOSOME 2193
SYNTENIC BLOCK FROM GPKOW (ENSDNOG00000016647) #13 TO PRAF2 (ENSDNOG00000031883) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSDNOG00000031883) #21 AND TFE3 (ENSDNOG00000039173) #23
SYNTENIC BLOCK FROM TFE3 (ENSDNOG00000039173) #16 TO KCND1 (ENSDNOG00000033902) #18 [REVERSED]
> Sloth [MODERNSPECIES]
> Marsupialia [ANCESTRALSPECIES]
>> CHROMOSOME 29
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00940000162057 #18
> Marsupialia_b [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17 [REVERSED]
> Diprotodontia [ANCESTRALSPECIES]
>> CHROMOSOME 28
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17 [REVERSED]
> Wallaby [MODERNSPECIES]
>> CHROMOSOME 1173
SYNTENIC BLOCK FROM GRIPAP1 (ENSMEUG00000002074) #17 TO KCND1 (ENSMEUG00000002064) #18 [REVERSED]
> Diprotodontia_a [ANCESTRALSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17
> Common wonbat [MODERNSPECIES]
>> CHROMOSOME 1079
SYNTENIC BLOCK FROM TFE3 (ENSVURG00010010649) #16 TO GRIPAP1 (ENSVURG00010010555) #17 [REVERSED]
> koala [MODERNSPECIES]
>> CHROMOSOME 294
SYNTENIC BLOCK FROM TFE3 (ENSPCIG00000027889) #16 TO GRIPAP1 (ENSPCIG00000027893) #17
> Tasmanian devil [MODERNSPECIES]
>> CHROMOSOME 2


>> CHROMOSOME 21
SYNTENIC BLOCK FROM TFE3 (ENSSHAG00000003327) #16 TO GRIPAP1 (ENSSHAG00000003080) #17 [REVERSED]
> Opossum [MODERNSPECIES]
>> CHROMOSOME 627
SYNTENIC BLOCK FROM TFE3 (ENSMODG00000009925) #16 TO ENSMODG00000010033 #18 [REVERSED]
> Platypus [MODERNSPECIES]
>> CHROMOSOME 17
SYNTENIC BLOCK FROM ENSOANG00000013577 #13 TO WDR45 (ENSOANG00000044470) #14
ADJACENCY BETWEEN WDR45 (ENSOANG00000044470) #14 AND TFE3 (ENSOANG00000013574) #16
SYNTENIC BLOCK FROM TFE3 (ENSOANG00000013574) #16 TO GRIPAP1 (ENSOANG00000051019) #17
> Sauria [ANCESTRALSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #266 AND ENSGT00940000157503 #268
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17 [REVERSED]
> Archelosauria [ANCESTRALSPECIES]
>> CHROMOSOME 46
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657 #14
>> CHROMOSOME 133
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #0 AND ENSGT00940000157503 #2
 [REVERSED]
> Cryptodira [ANCESTRALSPECIES]
>> CHROMOSOME 81

DISTANT LINK BETWEEN ENSGT00390000008631.b #19 AND ENSGT00940000157503 #17

> Chinese turtle [MODERNSPECIES]
> Testudinoidea [ANCESTRALSPECIES]
>> CHROMOSOME 40
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #13 AND ENSGT00940000155657 #29
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #39 AND ENSGT00940000157503 #41
 [REVERSED]
> Emydidae [ANCESTRALSPECIES]
>> CHROMOSOME 59
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #10 AND ENSGT00940000155657 #23
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #32 AND ENSGT00940000157503 #34
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000157503 #0 AND ENSGT00720000108868 #32
 [REVERSED]
> painted turtle [MODERNSPECIES]
>> CHROMOSOME 1022

DISTANT LINK BETWEEN GPKOW (ENSCPBG00000016609) #29 AND WDR45 (ENSCPBG00000017434) #15

SYNTENIC BLOCK FROM PRAF2 (ENSCPBG00000008246) #15 TO TFE3 (ENSCPBG00000008252) #16
DISTANT LINK BETWEEN TFE3 (ENSCPBG00000008252) #39 AND GRIPAP1 (ENSCPBG00000017481) #6

> Three-toed box turtle [MODERNSPECIES]
>> CHROMOSOME 391

DISTANT LINK BETWEEN PRAF2 (ENSTMTG00000009258) #15 AND TFE3 (ENSTMTG00000009292) #13

> Testudinidae [ANCESTRALSPECIES]
>> CHROMOSOME 46

DISTANT LINK BETWEEN ENSGT00390000015154 #60 AND ENSGT00940000155657 #44


DISTANT LINK BETWEEN ENSGT00390000008631.b #35 AND ENSGT00940000157503 #33

DISTANT LINK BETWEEN ENSGT00940000157503 #70 AND ENSGT00720000108868 #35

> Goode s thornscrub tortoise [MODERNSPECIES]
>> CHROMOSOME 169

DISTANT LINK BETWEEN GPKOW (ENSGEVG00005019696) #66 AND WDR45 (ENSGEVG00005020344) #51

SYNTENIC BLOCK FROM PRAF2 (ENSGEVG00005016535) #15 TO TFE3 (ENSGEVG00005016568) #16
> Abingdon island giant tortoise [MODERNSPECIES]
>> CHROMOSOME 2751
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSCABG00000016179) #15 AND TFE3 (ENSCABG00000016176) #17
 [REVERSED]
>> CHROMOSOME 643

DISTANT LINK BETWEEN ENSCABG00000014472 #15 AND GRIPAP1 (ENSCABG00000014673) #6
 [REVERSED]
> Archosauria [ANCESTRALSPECIES]
>> CHROMOSOME 103
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657 #14
> Australian saltwater crocodile [MODERNSPECIES]
> Aves [ANCESTRALSPECIES]
>> CHROMOSOME 101
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657 #14
> African ostrich [MODERNSPECIES]
> Neognathae [ANCESTRALSPECIES]
>> CHROMOSOME 78
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657 #14
> Galloanserae [ANCESTRALSPECIES]
> Phasianidae [ANCESTRALSPECIES]
> Phasianidae_b [ANCESTRALSPECIES]
> Chicken [MODERNSPECIES]
>> CHROMOSOME 129

DISTANT LINK BETWEEN ENSGALG00010001868 #5 AND WDR45 (ENSGALG00010001902) #3

> Turkey [MODERNSPECIES]
> Japanese quail [MODERNSPECIES]
> Anatidae [ANCESTRALSPECIES]
> Duck [MODERNSPECIES]
> Pink-footed goose [MODERNSPECIES]
> Neognathae_b [ANCESTRALSPECIES]
>> CHROMOSOME 59
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657.l #14
> Neognathae_c [ANCESTRALSPECIES]
>> CHROMOSOME 103
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657.l #14
> Golden eagle [MODERNSPECIES]
> Kakapo [MODERNSPECIES]
>> CHROMOSOME 27
SYNTENIC BLOCK FROM ENSSHBG00005008463 #13 TO WDR45 (ENSSHBG00005008450) #14 [REVERSED]
DISTANT LINK BETWEEN WDR45 (ENSSHBG00005008450) #2 AND GRIPAP1 (ENSSHBG00005007370) #31
 [REVERSED]
> Passeriformes [ANCESTRALSPECIES]
>> CHROMOSOME 63
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657.l #14 [REVERSED]
> Great tit [MODERNSPECIES]
>> CHROMOSOME 292
SYNTENIC BLOCK FROM GPKOW (ENSPMJG00000002833) #13 TO WDR45 (ENSPMJG00000002835) #14
> Passeriformes_d [ANCESTRALSPECIES]
>> CHROMOSOME 55
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #9 AND ENSGT00940000155657.k #11
 [REVERSED]
 [REVERSED]
> Flycatcher [MODERNSPECIES]
> Passeriformes_g [ANCESTRALSPECIES]
>> CHROMOSOME 69
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #9 AND ENSGT00940000155657.k #11
 [REVERSED]
 [REVERSED]
> Medium ground finch [MODERNSPECIES]
> Passeroidea [ANCESTRALSPECIES]
>> CHROMOSOME 73
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #9 AND ENSGT00940000155657.k #11
 [REVERSED]
 [REVERSED]
> Common canary [MODERNSPECIES]
> Zebra finch [MODERNSPECIES]
>> CHROMOSOME 38
SYNTENIC BLOCK FROM ENSTGUG00000019637 #13 TO WDR45 (ENSTGUG00000023573) #14


> Lepidosauria [ANCESTRALSPECIES]
>> CHROMOSOME 38
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15
DISTANT LINK BETWEEN ENSGT00390000008631.b #16 AND ENSGT00940000157503 #14
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17
> Episquamata [ANCESTRALSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #56 AND ENSGT00940000157503 #58
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17 [REVERSED]
> Toxicofera [ANCESTRALSPECIES]
>> CHROMOSOME 6
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #880 AND ENSGT00940000157503 #882
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17 [REVERSED]
> Elapidae [ANCESTRALSPECIES]
>> CHROMOSOME 21
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #184 AND ENSGT00940000157503 #186
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17 [REVERSED]
> Indian cobra [MODERNSPECIES]
>> CHROMOSOME 1
SYNTENIC BLOCK FROM GPKOW (ENSNNAG00000010730) #13 TO PRAF2 (ENSNNAG00000010800) #15
DISTANT LINK BETWEEN PRAF2 (ENSNNAG00000010800) #1976 AND TFE3 (ENSNNAG00000010930) #1974
SYNTENIC BLOCK FROM TFE3 (ENSNNAG00000010930) #16 TO GRIPAP1 (ENSNNAG00000010983) #17
> Elapidae_a [ANCESTRALSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #138 AND ENSGT00940000157503 #140
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17 [REVERSED]
> Blue-lipped sea krait [MODERNSPECIES]
>> CHROMOSOME 7044
SYNTENIC BLOCK FROM GPKOW (ENSLLTG00000004798) #13 TO PRAF2 (ENSLLTG00000004776) #15 [REVERSED]
>> CHROMOSOME 333
SYNTENIC BLOCK FROM TFE3 (ENSLLTG00000000775) #16 TO GRIPAP1 (ENSLLTG00000000703) #17 [REVERSED]
> Acanthophiinae [ANCESTRALSPECIES]
>> CHROMOSOME 23
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #133 AND ENSGT00940000157503 #135
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17 [REVERSED]
> Mainland tiger snake [MODERNSPECIES]
>> CHROMOSOME 81
SYNTENIC BLOCK FROM GPKOW (ENSNSUG00000019831) #13 TO PRAF2 (ENSNSUG00000019829) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSNSUG00000019829) #106 AND TFE3 (ENSNSUG00000019827) #108
SYNTENIC BLOCK FROM TFE3 (ENSNSUG00000019827) #16 TO GRIPAP1 (ENSNSUG00000019826) #17 [REVERSED]
> Eastern brown snake [MODERNSPECIES]
>> CHROMOSOME 52
SYNTENIC BLOCK FROM GPKOW (ENSPTXG00000008255) #13 TO PRAF2 (ENSPTXG00000008251) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSPTXG00000008251) #135 AND TFE3 (ENSPTXG00000008211) #137
SYNTENIC BLOCK FROM TFE3 (ENSPTXG00000008211) #16 TO GRIPAP1 (ENSPTXG00000008207) #17 [REVERSED]
> Lizard [MODERNSPECIES]
>> CHROMOSOME 940
SYNTENIC BLOCK FROM GPKOW (ENSACAG00000016598) #13 TO PRAF2 (ENSACAG00000016575) #15
DISTANT LINK BETWEEN PRAF2 (ENSACAG00000016575) #23 AND TFE3 (ENSACAG00000022140) #21
SYNTENIC BLOCK FROM TFE3 (ENSACAG00000022140) #16 TO GRIPAP1 (ENSACAG00000016477) #17
> Laterata [ANCESTRALSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00390000008631.b #15 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #532 AND ENSGT00940000157503 #534
SYNTENIC BLOCK FROM ENSGT00940000157503 #16 TO ENSGT00720000108868 #17 [REVERSED]
> Common wall lizard [MODERNSPECIES]
>> CHROMOSOME 8
SYNTENIC BLOCK FROM GPKOW (ENSPMRG00000018732) #13 TO PRAF2 (ENSPMRG00000018857) #15
DISTANT LINK BETWEEN PRAF2 (ENSPMRG00000018857) #574 AND TFE3 (ENSPMRG00000018894) #571
SYNTENIC BLOCK FROM TFE3 (ENSPMRG00000018894) #16 TO GRIPAP1 (ENSPMRG00000018908) #17
> Argentine black and white tegu [MODERNSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM GPKOW (ENSSMRG00000019242) #13 TO PRAF2 (ENSSMRG00000019240) #15 [REVERSED]
DISTANT LINK BETWEEN PRAF2 (ENSSMRG00000019240) #94 AND TFE3 (ENSSMRG00000019237) #96
SYNTENIC BLOCK FROM TFE3 (ENSSMRG00000019237) #16 TO GRIPAP1 (ENSSMRG00000019236) #17 [REVERSED]
> tuatara [MODERNSPECIES]
>> CHROMOSOME 1338
SYNTENIC BLOCK FROM ENSSPUG00000005543 #16 TO GRIPAP1 (ENSSPUG00000005484) #17 [REVERSED]
> Anura [ANCESTRALSPECIES]
>> CHROMOSOME 214
SYNTENIC BLOCK FROM ENSGT00390000015154 #13 TO ENSGT00940000155657 #14
> Leishan spiny toad [MODERNSPECIES]
>> CHROMOSOME 12
SYNTENIC BLOCK FROM GPKOW (ENSLLEG00000010113) #13 TO WDR45 (ENSLLEG00000010461) #14
> Frog [MODERNSPECIES]
>> CHROMOSOME 8

SYNTENIC BLOCK FROM tfe3 (ENSXETG00000047721) #16 TO gripap1 (ENSXETG00000048719) #17 [REVERSED]
> Coelacanth [MODERNSPECIES]
>> CHROMOSOME 1972
SYNTENIC BLOCK FROM tfe3a (ENSLACG00000007182) #16 TO GRIPAP1 (ENSLACG00000002279) #17 [REVERSED]
> Actinopterygii [ANCESTRALSPECIES]
> Reedfish [MODERNSPECIES]
>> CHROMOSOME 2

DISTANT LINK BETWEEN gpkow (ENSECRG00000009377) #536 AND wdr45 (ENSECRG00000010700) #488



DISTANT LINK BETWEEN tfe3a (ENSECRG00000020165) #506 AND gripap1 (ENSECRG00000009901) #441

> Neopterygii [ANCESTRALSPECIES]
>> CHROMOSOME 168
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #3 AND ENSGT00390000008631.b #7
 [REVERSED]
> Spotted gar [MODERNSPECIES]
>> CHROMOSOME 647
 [REVERSED]

 [REVERSED]
DISTANT LINK BETWEEN tfe3a (ENSLOCG00000014691) #58 AND gripap1 (ENSLOCG00000014510) #93

> Osteoglossocephalai [ANCESTRALSPECIES]
>> CHROMOSOME 116

DISTANT LINK BETWEEN ENSGT00390000015154 #6 AND ENSGT00390000008631.b #3

DISTANT LINK BETWEEN ENSGT00390000008631.b #20 AND ENSGT00940000157503.i.a #6

DISTANT LINK BETWEEN ENSGT00940000157503.i.a #44 AND ENSGT00720000108868 #20

> Clupeocephala [ANCESTRALSPECIES]
>> CHROMOSOME 206

DISTANT LINK BETWEEN ENSGT00390000015154 #6 AND ENSGT00390000008631.b #3

> Otomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 144
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #27 AND ENSGT00390000008631.b #30
 [REVERSED]
>> CHROMOSOME 83

DISTANT LINK BETWEEN ENSGT00940000157503.i.a #52 AND ENSGT00720000108868 #23

> Clupeiformes [ANCESTRALSPECIES]
>> CHROMOSOME 179

DISTANT LINK BETWEEN ENSGT00390000015154 #11 AND ENSGT00390000008631.b #7

>> CHROMOSOME 80

 [REVERSED]
> Atlantic herring [MODERNSPECIES]
>> CHROMOSOME 20

DISTANT LINK BETWEEN gpkow (ENSCHAG00000019478) #1063 AND praf2 (ENSCHAG00000019540) #1059



> Denticle herring [MODERNSPECIES]
>> CHROMOSOME 1

DISTANT LINK BETWEEN gpkow (ENSDCDG00000030122) #237 AND praf2 (ENSDCDG00000030134) #233

DISTANT LINK BETWEEN praf2 (ENSDCDG00000030134) #266 AND tfe3a (ENSDCDG00000014843) #237

DISTANT LINK BETWEEN tfe3a (ENSDCDG00000014843) #290 AND gripap1 (ENSDCDG00000033747) #266

> Otophysi [ANCESTRALSPECIES]
>> CHROMOSOME 294
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #10 AND ENSGT00390000008631.b #13
 [REVERSED]
>> CHROMOSOME 127

DISTANT LINK BETWEEN ENSGT00940000157503.i.a #36 AND ENSGT00720000108868 #19

> Characiphysae [ANCESTRALSPECIES]
>> CHROMOSOME 41

DISTANT LINK BETWEEN ENSGT00940000157503.i.a #43 AND ENSGT00720000108868 #16

>> CHROMOSOME 71
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #82 AND ENSGT00390000008631.b #85
 [REVERSED]
> Characiphysae_b [ANCESTRALSPECIES]
>> CHROMOSOME 75
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #82 AND ENSGT00390000008631.b #85
 [REVERSED]
> Electric eel [MODERNSPECIES]
>> CHROMOSOME 181

DISTANT LINK BETWEEN gpkow (ENSEEEG00000002349) #40 AND praf2 (ENSEEEG00000002357) #37

> Characoidei [ANCESTRALSPECIES]
>> CHROMOSOME 72
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #78 AND ENSGT00390000008631.b #81
 [REVERSED]
> Mexicana tetra [MODERNSPECIES]
>> CHROMOSOME 21
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSAMXG00000039266) #745 AND praf2 (ENSAMXG00000035889) #748
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN tfe3a (ENSAMXG00000038236) #717 AND gripap1 (ENSAMXG00000017631) #1000
 [REVERSED]
> Red-bellied piranha [MODERNSPECIES]
>> CHROMOSOME 1097
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSPNAG00000008360) #2 AND praf2 (ENSPNAG00000008387) #5
 [REVERSED]
> Channel catfish [MODERNSPECIES]
>> CHROMOSOME 24

DISTANT LINK BETWEEN gpkow (ENSIPUG00000008342) #185 AND ARL6IP5 (ENSIPUG00000008393) #182

DISTANT LINK BETWEEN ARL6IP5 (ENSIPUG00000008393) #845 AND tfe3a (ENSIPUG00000012922) #185


> Cyprinoidei [ANCESTRALSPECIES]
>> CHROMOSOME 32

DISTANT LINK BETWEEN ENSGT00940000157503.i.a #172 AND ENSGT00720000108868 #154

>> CHROMOSOME 47
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #19 AND ENSGT00390000008631.b #59
 [REVERSED]
> Cyprininae [ANCESTRALSPECIES]
>> CHROMOSOME 109

DISTANT LINK BETWEEN ENSGT00390000015154.b #76 AND ENSGT00390000008631.b.a.b #37

>> CHROMOSOME 111
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000157503.i.a.c #56 AND ENSGT00720000108868.d #81
 [REVERSED]
>> CHROMOSOME 134

DISTANT LINK BETWEEN ENSGT00940000157503.i.a.d #55 AND ENSGT00720000108868.c #28

> Cyprininae_a [ANCESTRALSPECIES]
>> CHROMOSOME 103
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154.b #6 AND ENSGT00390000008631.b.a.b #45
 [REVERSED]
>> CHROMOSOME 111
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000157503.i.a.c #68 AND ENSGT00720000108868.d #92
 [REVERSED]
> Golden-line barbel [MODERNSPECIES]
>> CHROMOSOME 63

DISTANT LINK BETWEEN tfe3a (ENSSGRG00000033483) #46 AND gripap1 (ENSSGRG00000036425) #23

> Common carp reference [MODERNSPECIES]
>> CHROMOSOME 23
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSCCRG00000051337) #221 AND praf2 (ENSCCRG00000064201) #252
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN tfe3a (ENSCCRG00000025498) #775 AND gripap1 (ENSCCRG00000054385) #801
 [REVERSED]
>> CHROMOSOME 17

DISTANT LINK BETWEEN gpkow (ENSCCRG00000031053) #687 AND praf2 (ENSCCRG00000029553) #649


DISTANT LINK BETWEEN tfe3a (ENSCCRG00000034728) #162 AND gripap1 (ENSCCRG00000005400) #138

> Goldfish [MODERNSPECIES]
>> CHROMOSOME 1857
 [REVERSED]
DISTANT LINK BETWEEN tfe3a (ENSCARG00000054238) #13 AND gripap1 (ENSCARG00000046818) #38
 [REVERSED]
>> CHROMOSOME 48
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSCARG00000035752) #490 AND praf2 (ENSCARG00000021505) #524
 [REVERSED]
DISTANT LINK BETWEEN praf2 (ENSCARG00000021505) #148 AND tfe3a (ENSCARG00000013560) #490
 [REVERSED]
DISTANT LINK BETWEEN tfe3a (ENSCARG00000013560) #121 AND gripap1 (ENSCARG00000006684) #148
 [REVERSED]
> Zebrafish [MODERNSPECIES]
>> CHROMOSOME 23
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN praf2 (ENSDARG00000032535) #140 AND tfe3a (ENSDARG00000098903) #842
 [REVERSED]
 [REVERSED]
> Euteleosteomorpha [ANCESTRALSPECIES]
>> CHROMOSOME 2
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #361 AND ENSGT00390000008631.b #364
 [REVERSED]
>> CHROMOSOME 144

DISTANT LINK BETWEEN ENSGT00940000157503.i.a #34 AND ENSGT00720000108868 #10

> Acanthomorphata [ANCESTRALSPECIES]
> Cod [MODERNSPECIES]
>> CHROMOSOME 0
 [REVERSED]
 [REVERSED]
> Euacanthomorphacea [ANCESTRALSPECIES]
>> CHROMOSOME 61
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000157503.j #21 AND ENSGT00720000108868 #38
 [REVERSED]
> Pinecone sodierfish [MODERNSPECIES]
>> CHROMOSOME 21


DISTANT LINK BETWEEN ENSMMDG00005018911 #32 AND gripap1 (ENSMMDG00005019692) #8

> Percomorphaceae [ANCESTRALSPECIES]
>> CHROMOSOME 36

DISTANT LINK BETWEEN ENSGT00940000157503.j #33 AND ENSGT00720000108868 #14

> Tiger tail seahorse [MODERNSPECIES]
>> CHROMOSOME 514

DISTANT LINK BETWEEN ENSHCOG00000011210 #55 AND gripap1 (ENSHCOG00000003180) #11
 [REVERSED]
> Percomorphaceae_B [ANCESTRALSPECIES]
>> CHROMOSOME 6
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #15 AND ENSGT00940000157503.j #286

DISTANT LINK BETWEEN ENSGT00940000157503.j #34 AND ENSGT00720000108868 #15

> Ovalentaria [ANCESTRALSPECIES]
>> CHROMOSOME 6
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #14 AND ENSGT00940000157503.j #285

DISTANT LINK BETWEEN ENSGT00940000157503.j #33 AND ENSGT00720000108868 #14

> Atherinomorphae [ANCESTRALSPECIES]
>> CHROMOSOME 50

DISTANT LINK BETWEEN ENSGT00940000157503.j #28 AND ENSGT00720000108868 #14
 [REVERSED]
> Cyprinodontiformes [ANCESTRALSPECIES]
>> CHROMOSOME 46

DISTANT LINK BETWEEN ENSGT00940000157503.j #29 AND ENSGT00720000108868 #14
 [REVERSED]
> Cyprinodontoidei [ANCESTRALSPECIES]
>> CHROMOSOME 57
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000157503.j #7 AND ENSGT00720000108868 #23

> NAME_4 [ANCESTRALSPECIES]
>> CHROMOSOME 162

DISTANT LINK BETWEEN ENSGT00940000157503.j #30 AND ENSGT00720000108868 #14
 [REVERSED]
> Mummichog [MODERNSPECIES]
> Sheepshead minnow [MODERNSPECIES]
> Poeciliinae [ANCESTRALSPECIES]
>> CHROMOSOME 45
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000157503.j #7 AND ENSGT00720000108868.g #22

> Platyfish [MODERNSPECIES]
>> CHROMOSOME 0

DISTANT LINK BETWEEN gpkow (ENSXMAG00000018216) #1135 AND ENSXMAG00000003547 #827

DISTANT LINK BETWEEN ENSXMAG00000003547 #1152 AND gripap1 (ENSXMAG00000015220) #1135
 [REVERSED]
> Poecilia [ANCESTRALSPECIES]
> NAME_6 [ANCESTRALSPECIES]
> Sailfin molly [MODERNSPECIES]
> Amazon molly [MODERNSPECIES]
> Guppy [MODERNSPECIES]
> Aplocheiloidei [ANCESTRALSPECIES]
> Turquoise killifish [MODERNSPECIES]
>> CHROMOSOME 1624

DISTANT LINK BETWEEN gpkow (ENSNFUG00015021388) #954 AND gripap1 (ENSNFUG00015023514) #49

> Mangrove rivulus [MODERNSPECIES]
> Oryzias [ANCESTRALSPECIES]
>> CHROMOSOME 45

DISTANT LINK BETWEEN ENSGT00940000157503.j #36 AND ENSGT00720000108868 #1
 [REVERSED]
> Oryzias_a [ANCESTRALSPECIES]
>> CHROMOSOME 0
 [REVERSED]

> Chinese medaka [MODERNSPECIES]
> Japanese Medaka HdrR [MODERNSPECIES]
>> CHROMOSOME 21

DISTANT LINK BETWEEN gpkow (ENSORLG00000014442) #1182 AND ENSORLG00000029338 #791
 [REVERSED]
DISTANT LINK BETWEEN ENSORLG00000029338 #1135 AND gripap1 (ENSORLG00000018356) #1182

> Oryzias_b [ANCESTRALSPECIES]
>> CHROMOSOME 48

DISTANT LINK BETWEEN ENSGT00940000157503.j #50 AND ENSGT00720000108868 #15
 [REVERSED]
> Javanese ricefish [MODERNSPECIES]
>> CHROMOSOME 21

DISTANT LINK BETWEEN gpkow (ENSOJAG00000016418) #965 AND TFE3 (ENSOJAG00000004250) #706

DISTANT LINK BETWEEN TFE3 (ENSOJAG00000004250) #1014 AND gripap1 (ENSOJAG00000001076) #965
 [REVERSED]
> Indian medaka [MODERNSPECIES]
>> CHROMOSOME 23

DISTANT LINK BETWEEN gpkow (ENSOMEG00000003236) #1041 AND ENSOMEG00000011663 #759
 [REVERSED]
> Ovalentaria_B [ANCESTRALSPECIES]
>> CHROMOSOME 2
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #14 AND ENSGT00940000157503.j #280

DISTANT LINK BETWEEN ENSGT00940000157503.j #33 AND ENSGT00720000108868 #14

> Cichlidae [ANCESTRALSPECIES]
>> CHROMOSOME 0

DISTANT LINK BETWEEN ENSGT00390000015154 #960 AND ENSGT00940000157503.j #762

DISTANT LINK BETWEEN ENSGT00940000157503.j #980 AND ENSGT00720000108868 #960

> Pseudocrenilabrinae [ANCESTRALSPECIES]
>> CHROMOSOME 5

DISTANT LINK BETWEEN ENSGT00390000015154 #1016 AND ENSGT00940000157503.j #808

DISTANT LINK BETWEEN ENSGT00940000157503.j #1037 AND ENSGT00720000108868 #1016

> Pseudocrenilabrinae_A [ANCESTRALSPECIES]
>> CHROMOSOME 18

DISTANT LINK BETWEEN ENSGT00390000015154 #439 AND ENSGT00940000157503.j #232

DISTANT LINK BETWEEN ENSGT00940000157503.j #460 AND ENSGT00720000108868 #439

> Haplochromini [ANCESTRALSPECIES]
>> CHROMOSOME 20

DISTANT LINK BETWEEN ENSGT00390000015154 #445 AND ENSGT00940000157503.j #234

DISTANT LINK BETWEEN ENSGT00940000157503.j #464 AND ENSGT00720000108868 #445

> Haplochromini_A [ANCESTRALSPECIES]
>> CHROMOSOME 17

DISTANT LINK BETWEEN ENSGT00390000015154 #446 AND ENSGT00940000157503.j #234

DISTANT LINK BETWEEN ENSGT00940000157503.j #465 AND ENSGT00720000108868 #446

> Haplochromini_B [ANCESTRALSPECIES]
>> CHROMOSOME 14

DISTANT LINK BETWEEN ENSGT00390000015154 #433 AND ENSGT00940000157503.j #223

DISTANT LINK BETWEEN ENSGT00940000157503.j #452 AND ENSGT00720000108868 #433

> Zebra mbuna [MODERNSPECIES]
>> CHROMOSOME 1103

DISTANT LINK BETWEEN gpkow (ENSMZEG00005026357) #923 AND TFE3 (ENSMZEG00005026764) #756

DISTANT LINK BETWEEN TFE3 (ENSMZEG00005026764) #940 AND gripap1 (ENSMZEG00005026781) #923
 [REVERSED]
> Eastern happy [MODERNSPECIES]
>> CHROMOSOME 12
 [REVERSED]
DISTANT LINK BETWEEN TFE3 (ENSACLG00000013619) #89 AND gripap1 (ENSACLG00000012389) #114
 [REVERSED]
> P. nyererei [MODERNSPECIES]
> Burton s mouthbrooder [MODERNSPECIES]
>> CHROMOSOME 396

DISTANT LINK BETWEEN TFE3 (ENSHBUG00000020599) #38 AND gripap1 (ENSHBUG00000019186) #17

> Lyretail cichlid [MODERNSPECIES]
>> CHROMOSOME 397

DISTANT LINK BETWEEN TFE3 (ENSNBRG00000008566) #45 AND gripap1 (ENSNBRG00000010193) #22

> Nile tilapia [MODERNSPECIES]
>> CHROMOSOME 12
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSONIG00000016834) #128 AND TFE3 (ENSONIG00000000820) #363
 [REVERSED]
DISTANT LINK BETWEEN TFE3 (ENSONIG00000000820) #80 AND gripap1 (ENSONIG00000014636) #128
 [REVERSED]
> Midas cichlid [MODERNSPECIES]
> Pomacentridae [ANCESTRALSPECIES]
>> CHROMOSOME 94


> Pomacentridae_A [ANCESTRALSPECIES]
>> CHROMOSOME 92
 [REVERSED]
 [REVERSED]
> Amphiprion [ANCESTRALSPECIES]
>> CHROMOSOME 119


> Orange clownfish [MODERNSPECIES]
>> CHROMOSOME 22

DISTANT LINK BETWEEN gpkow (ENSAPEG00000021416) #1135 AND ENSAPEG00000024096 #582


> Clown anemonefish [MODERNSPECIES]
> Spiny chromis [MODERNSPECIES]
> Bicolor damselfish [MODERNSPECIES]
> Percomorphaceae_C [ANCESTRALSPECIES]
>> CHROMOSOME 4
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #15 AND ENSGT00940000157503.j #286

DISTANT LINK BETWEEN ENSGT00940000157503.j #36 AND ENSGT00720000108868 #15

> Percomorphaceae_D [ANCESTRALSPECIES]
>> CHROMOSOME 4
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #15 AND ENSGT00940000157503.j #280

DISTANT LINK BETWEEN ENSGT00940000157503.j #36 AND ENSGT00720000108868 #15

> Carangaria [ANCESTRALSPECIES]
>> CHROMOSOME 2
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #15 AND ENSGT00940000157503.j #280

DISTANT LINK BETWEEN ENSGT00940000157503.j #36 AND ENSGT00720000108868 #15

> Pleuronectoidei [ANCESTRALSPECIES]
>> CHROMOSOME 24

DISTANT LINK BETWEEN ENSGT00390000015154 #320 AND ENSGT00940000157503.j #70
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000157503.j #300 AND ENSGT00720000108868 #320
 [REVERSED]
> Tongue sole [MODERNSPECIES]
>> CHROMOSOME 1


DISTANT LINK BETWEEN ENSCSEG00000017362 #31 AND gripap1 (ENSCSEG00000018111) #13

> Turbot [MODERNSPECIES]
>> CHROMOSOME 2

 [REVERSED]

> Carangaria_A [ANCESTRALSPECIES]
>> CHROMOSOME 1
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #15 AND ENSGT00940000157503.j #274

DISTANT LINK BETWEEN ENSGT00940000157503.j #34 AND ENSGT00720000108868 #15

> Barramundi perch [MODERNSPECIES]
> Seriola [ANCESTRALSPECIES]
>> CHROMOSOME 75

DISTANT LINK BETWEEN ENSGT00940000157503.j #37 AND ENSGT00720000108868 #15

> Greater amberjack [MODERNSPECIES]
>> CHROMOSOME 150

DISTANT LINK BETWEEN TFE3 (ENSSDUG00000019935) #38 AND gripap1 (ENSSDUG00000000417) #16

> Yellowtail amberjack [MODERNSPECIES]
> Anabantaria [ANCESTRALSPECIES]
>> CHROMOSOME 3


DISTANT LINK BETWEEN ENSGT00940000157503.j #34 AND ENSGT00720000108868 #14

> Zig-zag eel [MODERNSPECIES]
>> CHROMOSOME 21

DISTANT LINK BETWEEN gpkow (ENSMAMG00000024235) #703 AND ENSMAMG00000011838 #370

DISTANT LINK BETWEEN ENSMAMG00000011838 #724 AND gripap1 (ENSMAMG00000012610) #703

> Anabantoidei [ANCESTRALSPECIES]
>> CHROMOSOME 2
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000157503.j #1019 AND ENSGT00720000108868 #1038
 [REVERSED]
> Climbing perch [MODERNSPECIES]
>> CHROMOSOME 20


DISTANT LINK BETWEEN ENSATEG00000019578 #36 AND gripap1 (ENSATEG00000020553) #16

> Siamese fighting fish [MODERNSPECIES]
>> CHROMOSOME 18


DISTANT LINK BETWEEN ENSBSLG00000012370 #27 AND gripap1 (ENSBSLG00000019653) #6

> Eupercaria [ANCESTRALSPECIES]
>> CHROMOSOME 4
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #15 AND ENSGT00940000157503.j #280

DISTANT LINK BETWEEN ENSGT00940000157503.j #36 AND ENSGT00720000108868 #15

> Tetraodontidae [ANCESTRALSPECIES]
> Tetraodon [MODERNSPECIES]
>> CHROMOSOME 26

DISTANT LINK BETWEEN praf2 (ENSTNIG00000003149) #2195 AND ENSTNIG00000019469 #318

DISTANT LINK BETWEEN ENSTNIG00000019469 #3509 AND gripap1 (ENSTNIG00000003886) #2195

> Fugu [MODERNSPECIES]
>> CHROMOSOME 15

 [REVERSED]
 [REVERSED]
> Eupecaria_A [ANCESTRALSPECIES]
>> CHROMOSOME 4

DISTANT LINK BETWEEN ENSGT00390000015154 #1095 AND ENSGT00940000157503.j #830
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000157503.j #1074 AND ENSGT00720000108868 #1095
 [REVERSED]
> Ballan wrasse [MODERNSPECIES]
> Eupecaria_B [ANCESTRALSPECIES]
>> CHROMOSOME 5

DISTANT LINK BETWEEN ENSGT00390000015154 #1090 AND ENSGT00940000157503.j #827
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000157503.j #1069 AND ENSGT00720000108868 #1090
 [REVERSED]
> Eupecaria_C [ANCESTRALSPECIES]
>> CHROMOSOME 31

DISTANT LINK BETWEEN ENSGT00940000157503.j #35 AND ENSGT00720000108868 #14

> Eupercaria_incertae_sedis [ANCESTRALSPECIES]
>> CHROMOSOME 42

DISTANT LINK BETWEEN ENSGT00940000157503.j #35 AND ENSGT00720000108868 #14

> European seabass [MODERNSPECIES]
>> CHROMOSOME 14
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSDLAG00005024389) #29 AND ENSDLAG00005028920 #308

DISTANT LINK BETWEEN ENSDLAG00005028920 #49 AND gripap1 (ENSDLAG00005030091) #29

> Large yellow croaker [MODERNSPECIES]
>> CHROMOSOME 29

DISTANT LINK BETWEEN TFE3 (ENSLCRG00005021053) #34 AND gripap1 (ENSLCRG00005002643) #14

> Gilthead seabream [MODERNSPECIES]
>> CHROMOSOME 21
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSSAUG00010013349) #32 AND gripap1 (ENSSAUG00010000968) #335

> Perciformes [ANCESTRALSPECIES]
> Cottioidei [ANCESTRALSPECIES]
>> CHROMOSOME 47
 [REVERSED]
 [REVERSED]
> Lumpfish [MODERNSPECIES]
>> CHROMOSOME 22
 [REVERSED]
 [REVERSED]
 [REVERSED]
> Stickleback [MODERNSPECIES]
> Perciformes_a [ANCESTRALSPECIES]
>> CHROMOSOME 2
 [REVERSED]

> Pike perch [MODERNSPECIES]
>> CHROMOSOME 96

 [REVERSED]
> Channel bull blenny [MODERNSPECIES]
>> CHROMOSOME 21

DISTANT LINK BETWEEN gpkow (ENSCGOG00000011874) #17 AND gripap1 (ENSCGOG00000000482) #5
 [REVERSED]
> Protacanthopterygii [ANCESTRALSPECIES]
>> CHROMOSOME 6

DISTANT LINK BETWEEN ENSGT00390000015154 #95 AND ENSGT00390000008631.b #92

> Salmoninae [ANCESTRALSPECIES]
>> CHROMOSOME 28

DISTANT LINK BETWEEN ENSGT00390000015154.c #75 AND ENSGT00390000008631.b.f #72

>> CHROMOSOME 10
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154.d #133 AND ENSGT00390000008631.b.e #136
 [REVERSED]
> Salmoninae_a [ANCESTRALSPECIES]
>> CHROMOSOME 14
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154.d #346 AND ENSGT00390000008631.b.e #349
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 27
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154.c #400 AND ENSGT00390000008631.b.f #403
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b.f #34 AND ENSGT00940000157503.i.a.f #400
 [REVERSED]
>> CHROMOSOME 26
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000157503.i.a.e #362 AND ENSGT00720000108868.f #475

> Oncorhynchus [ANCESTRALSPECIES]
>> CHROMOSOME 7

DISTANT LINK BETWEEN ENSGT00390000015154.d #542 AND ENSGT00390000008631.b.e #539


>> CHROMOSOME 20
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154.c #392 AND ENSGT00390000008631.b.f #395
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b.f #34 AND ENSGT00940000157503.i.a.f #392
 [REVERSED]
 [REVERSED]
> Rainbow trout [MODERNSPECIES]
>> CHROMOSOME 30

DISTANT LINK BETWEEN gpkow (ENSOMYG00000009911) #1304 AND ENSOMYG00000009985 #1301

DISTANT LINK BETWEEN ENSOMYG00000009985 #1705 AND tfe3a (ENSOMYG00000061427) #1304


>> CHROMOSOME 7
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSOMYG00000010552) #1094 AND ENSOMYG00000057851 #1097
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN tfe3a (ENSOMYG00000049159) #1588 AND gripap1 (ENSOMYG00000040496) #1742
 [REVERSED]
> Oncorhynchus_a [ANCESTRALSPECIES]
>> CHROMOSOME 9

DISTANT LINK BETWEEN ENSGT00390000015154.d #555 AND ENSGT00390000008631.b.e #552


DISTANT LINK BETWEEN ENSGT00940000157503.i.a.e #124 AND ENSGT00720000108868.f #20

>> CHROMOSOME 7
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154.c #392 AND ENSGT00390000008631.b.f #395
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b.f #31 AND ENSGT00940000157503.i.a.f #392
 [REVERSED]
 [REVERSED]
> Chinook salmon [MODERNSPECIES]
>> CHROMOSOME 7

DISTANT LINK BETWEEN gpkow (ENSOTSG00005006762) #929 AND praf2 (ENSOTSG00005006766) #926

DISTANT LINK BETWEEN praf2 (ENSOTSG00005006766) #1213 AND tfe3a (ENSOTSG00005002414) #929


>> CHROMOSOME 14
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSOTSG00005035197) #355 AND praf2 (ENSOTSG00005035189) #358
 [REVERSED]
 [REVERSED]
>> CHROMOSOME 2955

DISTANT LINK BETWEEN gpkow (ENSOTSG00005035168) #32 AND praf2 (ENSOTSG00005035171) #29

> Coho salmon [MODERNSPECIES]
>> CHROMOSOME 8

DISTANT LINK BETWEEN gpkow (ENSOKIG00005009642) #1371 AND PRAF2 (ENSOKIG00005009746) #1368

DISTANT LINK BETWEEN PRAF2 (ENSOKIG00005009746) #1736 AND tfe3a (ENSOKIG00005006585) #1371


>> CHROMOSOME 16
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSOKIG00005038944) #373 AND praf2 (ENSOKIG00005038888) #376
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN tfe3a (ENSOKIG00005040691) #826 AND gripap1 (ENSOKIG00005022809) #954
 [REVERSED]
> Salmo [ANCESTRALSPECIES]
>> CHROMOSOME 16

DISTANT LINK BETWEEN ENSGT00390000015154.c #268 AND ENSGT00390000008631.b.f #265

DISTANT LINK BETWEEN ENSGT00390000008631.b.f #631 AND ENSGT00940000157503.i.a.f #268


>> CHROMOSOME 4
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154.d #345 AND ENSGT00390000008631.b.e #348
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000157503.i.a.e #794 AND ENSGT00720000108868.f #906
 [REVERSED]
> River trout [MODERNSPECIES]
>> CHROMOSOME 23
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSSTUG00000012041) #358 AND praf2 (ENSSTUG00000011986) #361
 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN tfe3a (ENSSTUG00000006777) #811 AND gripap1 (ENSSTUG00000050061) #933
 [REVERSED]
>> CHROMOSOME 20
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSSTUG00000014732) #431 AND praf2 (ENSSTUG00000014687) #434
 [REVERSED]
DISTANT LINK BETWEEN praf2 (ENSSTUG00000014687) #47 AND tfe3a (ENSSTUG00000009833) #431
 [REVERSED]
 [REVERSED]
> Atlantic salmon [MODERNSPECIES]
>> CHROMOSOME 6

DISTANT LINK BETWEEN ENSSSAG00000069109 #1423 AND ENSSSAG00000069148 #1420

DISTANT LINK BETWEEN ENSSSAG00000069148 #1842 AND tfe3a (ENSSSAG00000056524) #1423


>> CHROMOSOME 4

DISTANT LINK BETWEEN gpkow (ENSSSAG00000064703) #661 AND ENSSSAG00000064653 #658


DISTANT LINK BETWEEN tfe3a (ENSSSAG00000096211) #184 AND gripap1 (ENSSSAG00000072624) #51

> Huchen [MODERNSPECIES]
>> CHROMOSOME 672
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSHHUG00000022814) #0 AND praf2 (ENSHHUG00000022801) #2
 [REVERSED]
>> CHROMOSOME 59
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSHHUG00000031056) #79 AND praf2 (ENSHHUG00000031031) #82
 [REVERSED]
> Northern pike [MODERNSPECIES]
>> CHROMOSOME 11
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSELUG00000022223) #493 AND praf2 (ENSELUG00000022264) #496
 [REVERSED]
DISTANT LINK BETWEEN praf2 (ENSELUG00000022264) #73 AND tfe3a (ENSELUG00000019126) #493
 [REVERSED]
 [REVERSED]
> Osteoglossiformes [ANCESTRALSPECIES]
>> CHROMOSOME 147

DISTANT LINK BETWEEN ENSGT00940000157503.i.a #37 AND ENSGT00720000108868 #10

>> CHROMOSOME 50
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000015154 #40 AND ENSGT00390000008631.b #43
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00390000008631.b #28 AND ENSGT00940000157503.i.b #40
 [REVERSED]
> Asian bonytongue [MODERNSPECIES]
>> CHROMOSOME 0
 [REVERSED]
DISTANT LINK BETWEEN tfe3a (ENSSFOG00015001934) #303 AND gripap1 (ENSSFOG00015003095) #333
 [REVERSED]
>> CHROMOSOME 14
 [REVERSED]
DISTANT LINK BETWEEN gpkow (ENSSFOG00015009901) #161 AND praf2 (ENSSFOG00015009826) #164
 [REVERSED]
DISTANT LINK BETWEEN praf2 (ENSSFOG00015009826) #147 AND tfe3b (ENSSFOG00015008689) #161
 [REVERSED]
> P. kingsleyae [MODERNSPECIES]
>> CHROMOSOME 32

DISTANT LINK BETWEEN gpkow (ENSPKIG00000008382) #84 AND praf2 (ENSPKIG00000008455) #81

DISTANT LINK BETWEEN praf2 (ENSPKIG00000008455) #97 AND tfe3b (ENSPKIG00000012043) #84

> Elephant shark [MODERNSPECIES]
> Cyclostomata [ANCESTRALSPECIES]
> Lamprey [MODERNSPECIES]
> Hagfish [MODERNSPECIES]
> Ciona [ANCESTRALSPECIES]
> Ciona intestinalis [MODERNSPECIES]
> Ciona savignyi [MODERNSPECIES]
> Ecdysozoa [ANCESTRALSPECIES]
> Caenorhabditis elegans [MODERNSPECIES]
>> CHROMOSOME 3


> Fruitfly [MODERNSPECIES]
> Yeast [MODERNSPECIES]