> Mus [ANCESTRALSPECIES]
>> CHROMOSOME 18
SYNTENIC BLOCK FROM ENSGT00940000153434.a.a #0 TO ENSGT00950000183043.a.b.b.a.b.u.a.b.b #8
DISTANT LINK BETWEEN ENSGT00950000183043.a.b.b.a.b.u.a.b.b #449 AND ENSGT00950000183043.a.b.b.a.b.u.b #447
SYNTENIC BLOCK FROM ENSGT00950000183043.a.b.b.a.b.u.b #9 TO ENSGT00940000153321.b.b.l.b.b.b.b.b #19
SYNTENIC BLOCK FROM ENSGT00940000153321.b.b.l.b.b.b.b.b #21 TO ENSGT00940000153321.b.b.l.b.b.a.b.b #30
> Mus_A [ANCESTRALSPECIES]
>> CHROMOSOME 14
SYNTENIC BLOCK FROM ENSGT00940000153434.a.a #0 TO ENSGT00950000183043.a.b.b.a.b.u.a.b.b #8 [REVERSED]
DISTANT LINK BETWEEN ENSGT00950000183043.a.b.b.a.b.u.a.b.b #312 AND ENSGT00950000183043.a.b.b.a.b.u.b #314
SYNTENIC BLOCK FROM ENSGT00950000183043.a.b.b.a.b.u.b #9 TO ENSGT00390000010930.b #20 [REVERSED]
 [REVERSED]
DISTANT LINK BETWEEN ENSGT00940000153321.b.b.l.b.b.b.b.b #300 AND ENSGT00390000010930.a #302
SYNTENIC BLOCK FROM ENSGT00390000010930.a #22 TO ENSGT00940000153321.b.b.l.b.b.a.b.b #30 [REVERSED]
> Mus_B [ANCESTRALSPECIES]
>> CHROMOSOME 13
SYNTENIC BLOCK FROM ENSGT00940000153434.a.a #0 TO ENSGT00950000183043.a.b.b.a.b.u.a.b.b #8 [REVERSED]
DISTANT LINK BETWEEN ENSGT00950000183043.a.b.b.a.b.u.a.b.b #311 AND ENSGT00950000183043.a.b.b.a.b.u.b #313
SYNTENIC BLOCK FROM ENSGT00950000183043.a.b.b.a.b.u.b #9 TO ENSGT00940000153321.b.b.l.b.b.a.b.b #30 [REVERSED]
> Mus_C [ANCESTRALSPECIES]
>> CHROMOSOME 10
SYNTENIC BLOCK FROM ENSGT00940000153434.a.a #0 TO ENSGT00950000183043.a.b.b.a.b.u.a.b.b #8
DISTANT LINK BETWEEN ENSGT00950000183043.a.b.b.a.b.u.a.b.b #425 AND ENSGT00950000183043.a.b.b.a.b.u.b #423
SYNTENIC BLOCK FROM ENSGT00950000183043.a.b.b.a.b.u.b #9 TO ENSGT00940000153321.b.b.l.b.b.a.b.b #30
> spretus [REFERENCESPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM Hnrnpk (MGP_SPRETEiJ_G0019479) #0 TO MGP_SPRETEiJ_G0019509 #30
> Steppe mouse [MODERNSPECIES]
>> CHROMOSOME 2052
SYNTENIC BLOCK FROM Ctsr (ENSMSIG00000015645) #25 TO Cts7 (ENSMSIG00000015541) #28 [REVERSED]
>> CHROMOSOME 3363
SYNTENIC BLOCK FROM Hnrnpk (ENSMSIG00000020356) #0 TO Slc28a3 (ENSMSIG00000020681) #2
DISTANT LINK BETWEEN Slc28a3 (ENSMSIG00000020681) #59 AND Ntrk2 (ENSMSIG00000020750) #57
SYNTENIC BLOCK FROM Ntrk2 (ENSMSIG00000020750) #3 TO Spata31d1a (ENSMSIG00000021365) #8
DISTANT LINK BETWEEN Spata31d1a (ENSMSIG00000021365) #66 AND Spata31d1d (ENSMSIG00000021387) #64
SYNTENIC BLOCK FROM Spata31d1d (ENSMSIG00000021387) #9 TO ENSMSIG00000021571 #14
DISTANT LINK BETWEEN ENSMSIG00000021571 #73 AND Dapk1 (ENSMSIG00000021579) #71
SYNTENIC BLOCK FROM Dapk1 (ENSMSIG00000021579) #15 TO Ctsj (ENSMSIG00000021739) #23
> Mouse [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM Hnrnpk (ENSMUSG00000021546) #0 TO Spata31d1a (ENSMUSG00000050876) #8
DISTANT LINK BETWEEN Spata31d1a (ENSMUSG00000050876) #478 AND Spata31d1d (ENSMUSG00000043986) #476
SYNTENIC BLOCK FROM Spata31d1d (ENSMUSG00000043986) #9 TO 1700014D04Rik (ENSMUSG00000051054) #10

SYNTENIC BLOCK FROM Isca1 (ENSMUSG00000044792) #11 TO Gas1 (ENSMUSG00000052957) #13
ADJACENCY BETWEEN Gas1 (ENSMUSG00000052957) #13 AND Dapk1 (ENSMUSG00000021559) #15
SYNTENIC BLOCK FROM Dapk1 (ENSMUSG00000021559) #15 TO Ctla2b (ENSMUSG00000074874) #19
DISTANT LINK BETWEEN Ctla2b (ENSMUSG00000074874) #489 AND Tpbpb (ENSMUSG00000062705) #487
SYNTENIC BLOCK FROM Tpbpb (ENSMUSG00000062705) #20 TO Ctsm (ENSMUSG00000074871) #29
DISTANT LINK BETWEEN Ctsm (ENSMUSG00000074871) #500 AND Cts3 (ENSMUSG00000074870) #498

> Ryukyu mouse [MODERNSPECIES]
>> CHROMOSOME 4
SYNTENIC BLOCK FROM Rmi1 (MGP_CAROLIEiJ_G0018600) #1 TO MGP_CAROLIEiJ_G0018607 #8
DISTANT LINK BETWEEN MGP_CAROLIEiJ_G0018607 #427 AND Spata31d1d (MGP_CAROLIEiJ_G0018609) #425
SYNTENIC BLOCK FROM Spata31d1d (MGP_CAROLIEiJ_G0018609) #9 TO MGP_CAROLIEiJ_G0018619 #19
SYNTENIC BLOCK FROM MGP_CAROLIEiJ_G0018620 #19 TO Tpbpb (MGP_CAROLIEiJ_G0018621) #20


DISTANT LINK BETWEEN MGP_CAROLIEiJ_G0018620 #440 AND MGP_CAROLIEiJ_G0018622 #438
SYNTENIC BLOCK FROM MGP_CAROLIEiJ_G0018622 #22 TO Ctsj (MGP_CAROLIEiJ_G0018623) #23
ADJACENCY BETWEEN Ctsj (MGP_CAROLIEiJ_G0018623) #23 AND Ctsr (MGP_CAROLIEiJ_G0018624) #25
SYNTENIC BLOCK FROM Ctsr (MGP_CAROLIEiJ_G0018624) #25 TO MGP_CAROLIEiJ_G0018629 #30
> Shrew mouse [MODERNSPECIES]
>> CHROMOSOME 7
SYNTENIC BLOCK FROM Hnrnpk (MGP_PahariEiJ_G0019663) #0 TO MGP_PahariEiJ_G0019671 #8
DISTANT LINK BETWEEN MGP_PahariEiJ_G0019671 #488 AND Spata31d1d (MGP_PahariEiJ_G0019673) #486
SYNTENIC BLOCK FROM Spata31d1d (MGP_PahariEiJ_G0019673) #9 TO MGP_PahariEiJ_G0019683 #19


SYNTENIC BLOCK FROM MGP_PahariEiJ_G0019684 #21 TO MGP_PahariEiJ_G0019685 #22
SYNTENIC BLOCK FROM MGP_PahariEiJ_G0019686 #22 TO Ctsj (MGP_PahariEiJ_G0019687) #23
ADJACENCY BETWEEN Ctsj (MGP_PahariEiJ_G0019687) #23 AND Ctsr (MGP_PahariEiJ_G0019688) #25
SYNTENIC BLOCK FROM Ctsr (MGP_PahariEiJ_G0019688) #25 TO MGP_PahariEiJ_G0019693 #30